ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf115i16 |
|---|---|
| Clone Library Name | barley_pub |
>P24804:TA29_TOBAC Anther-specific protein TA-29 - Nicotiana tabacum (Common tobacco)| Length = 321 Score = 34.7 bits (78), Expect = 0.53 Identities = 22/69 (31%), Positives = 30/69 (43%) Frame = +3 Query: 279 GGASGQEGDAAQVPFYAYLLASAVTAIAAIGSIFEYTNGRPVFGVVGTDSPLYAPILGFF 458 GG G +G + P Y Y ++ G F +PVFGV P+Y+P G+ Sbjct: 68 GGGGGGDGGGSDTPNYGYNPGCSIHGCTVPGFGFL---PKPVFGV-----PVYSPGCGYV 119 Query: 459 AVTGIPTSG 485 IPT G Sbjct: 120 CPADIPTGG 128
>Q5RDB8:NPAL1_PONPY NIPA-like protein 1 - Pongo pygmaeus (Orangutan)| Length = 410 Score = 33.1 bits (74), Expect = 1.6 Identities = 19/70 (27%), Positives = 30/70 (42%) Frame = +3 Query: 318 PFYAYLLASAVTAIAAIGSIFEYTNGRPVFGVVGTDSPLYAPILGFFAVTGIPTSGYLWY 497 P Y S V +AI +F+ G ++GT S + I+G F + + W Sbjct: 308 PIYYVFFTSMVVTCSAI--LFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTDITWS 365 Query: 498 KAVQTANKDA 527 + TA K+A Sbjct: 366 ELTSTAKKEA 375
>Q6NVV3:NPAL1_HUMAN NIPA-like protein 1 - Homo sapiens (Human)| Length = 410 Score = 33.1 bits (74), Expect = 1.6 Identities = 19/70 (27%), Positives = 30/70 (42%) Frame = +3 Query: 318 PFYAYLLASAVTAIAAIGSIFEYTNGRPVFGVVGTDSPLYAPILGFFAVTGIPTSGYLWY 497 P Y S V +AI +F+ G ++GT S + I+G F + + W Sbjct: 308 PIYYVFFTSMVVTCSAI--LFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTDITWS 365 Query: 498 KAVQTANKDA 527 + TA K+A Sbjct: 366 ELTSTAKKEA 375
>Q701N4:KRA52_HUMAN Keratin-associated protein 5-2 - Homo sapiens (Human)| Length = 177 Score = 31.6 bits (70), Expect = 4.6 Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 3/38 (7%) Frame = -2 Query: 684 PCCCFSQ-C*PICSAGSACSP--STKNGYYDICSACSL 580 PCCC S C P+C S C P N +C C + Sbjct: 140 PCCCQSSCCVPVCCQSSCCKPCCCQSNCCVPVCCQCKI 177
>O75690:KRA58_HUMAN Keratin-associated protein 5-8 - Homo sapiens (Human)| Length = 187 Score = 31.2 bits (69), Expect = 5.9 Identities = 14/37 (37%), Positives = 14/37 (37%) Frame = -2 Query: 684 PCCCFSQC*PICSAGSACSPSTKNGYYDICSACSLLS 574 PCCC S C C S C P C CS S Sbjct: 93 PCCCSSGCGSSCCQSSCCKPCCSQS--SCCKPCSCSS 127 Score = 31.2 bits (69), Expect = 5.9 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 2/37 (5%) Frame = -2 Query: 684 PCCCFSQC*PICSAGSACSP--STKNGYYDICSACSL 580 PCCC S C C S C P S + IC C + Sbjct: 151 PCCCSSGCGSSCCQSSCCKPCCSQSSCCVPICCQCKI 187
>Q6L8G8:KRA57_HUMAN Keratin-associated protein 5-7 - Homo sapiens (Human)| Length = 165 Score = 31.2 bits (69), Expect = 5.9 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 2/37 (5%) Frame = -2 Query: 684 PCCCFSQC*PICSAGSACSP--STKNGYYDICSACSL 580 PCCC S C C S C+P S + +C C + Sbjct: 129 PCCCSSGCGSSCCQSSCCNPCCSQSSCCVPVCCQCKI 165
>Q6L8H2:KRA53_HUMAN Keratin-associated protein 5-3 - Homo sapiens (Human)| Length = 238 Score = 31.2 bits (69), Expect = 5.9 Identities = 13/33 (39%), Positives = 13/33 (39%) Frame = -2 Query: 684 PCCCFSQC*PICSAGSACSPSTKNGYYDICSAC 586 PCCC S C C S C PS C C Sbjct: 134 PCCCSSGCGSSCCQSSCCKPSCSQS--SCCKPC 164 Score = 31.2 bits (69), Expect = 5.9 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 2/37 (5%) Frame = -2 Query: 684 PCCCFSQC*PICSAGSACSP--STKNGYYDICSACSL 580 PCCC S C C S C P S + IC C + Sbjct: 202 PCCCSSGCGSSCCQSSCCKPCSSQSSCCVPICCQCKI 238
>P62720:YCF4_WHEAT Photosystem I assembly protein ycf4 - Triticum aestivum (Wheat)| Length = 185 Score = 30.8 bits (68), Expect = 7.7 Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 3/82 (3%) Frame = +3 Query: 321 FYAYLLASAVTAIAAIGSIFEYTNGRPVFGVVGTDSPLYAP---ILGFFAVTGIPTSGYL 491 F+A +L ++G I Y G+ + ++ + L+ P ++ F+ + G+ S YL Sbjct: 23 FWACILFLGSLGFLSVG-ISSYL-GKNIISILPSQEILFFPQGVVMSFYGIAGLFISSYL 80 Query: 492 WYKAVQTANKDAEEQDRRDGFL 557 W + + DR++G + Sbjct: 81 WCTILWNVGSGYDRFDRKEGIV 102
>P0C515:YCF4_ORYSJ Photosystem I assembly protein ycf4 - Oryza sativa subsp. japonica| (Rice) Length = 185 Score = 30.8 bits (68), Expect = 7.7 Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 3/80 (3%) Frame = +3 Query: 321 FYAYLLASAVTAIAAIGSIFEYTNGRPVFGVVGTDSPLYAP---ILGFFAVTGIPTSGYL 491 F+A +L A+G+ G+ + V+ + L+ P ++ F+ + G+ S YL Sbjct: 23 FWACILFLGSLGFLAVGASSYL--GKNIISVLPSQQILFFPQGVVMSFYGIAGLFISAYL 80 Query: 492 WYKAVQTANKDAEEQDRRDG 551 W + + DR++G Sbjct: 81 WCTILWNVGSGYDRFDRKEG 100
>P0C514:YCF4_ORYSI Photosystem I assembly protein ycf4 - Oryza sativa subsp. indica| (Rice) Length = 185 Score = 30.8 bits (68), Expect = 7.7 Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 3/80 (3%) Frame = +3 Query: 321 FYAYLLASAVTAIAAIGSIFEYTNGRPVFGVVGTDSPLYAP---ILGFFAVTGIPTSGYL 491 F+A +L A+G+ G+ + V+ + L+ P ++ F+ + G+ S YL Sbjct: 23 FWACILFLGSLGFLAVGASSYL--GKNIISVLPSQQILFFPQGVVMSFYGIAGLFISAYL 80 Query: 492 WYKAVQTANKDAEEQDRRDG 551 W + + DR++G Sbjct: 81 WCTILWNVGSGYDRFDRKEG 100
>P0C513:YCF4_ORYSA Photosystem I assembly protein ycf4 - Oryza sativa (Rice)| Length = 185 Score = 30.8 bits (68), Expect = 7.7 Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 3/80 (3%) Frame = +3 Query: 321 FYAYLLASAVTAIAAIGSIFEYTNGRPVFGVVGTDSPLYAP---ILGFFAVTGIPTSGYL 491 F+A +L A+G+ G+ + V+ + L+ P ++ F+ + G+ S YL Sbjct: 23 FWACILFLGSLGFLAVGASSYL--GKNIISVLPSQQILFFPQGVVMSFYGIAGLFISAYL 80 Query: 492 WYKAVQTANKDAEEQDRRDG 551 W + + DR++G Sbjct: 81 WCTILWNVGSGYDRFDRKEG 100
>Q6ENG3:YCF4_ORYNI Photosystem I assembly protein ycf4 - Oryza nivara (Indian wild| rice) Length = 185 Score = 30.8 bits (68), Expect = 7.7 Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 3/80 (3%) Frame = +3 Query: 321 FYAYLLASAVTAIAAIGSIFEYTNGRPVFGVVGTDSPLYAP---ILGFFAVTGIPTSGYL 491 F+A +L A+G+ G+ + V+ + L+ P ++ F+ + G+ S YL Sbjct: 23 FWACILFLGSLGFLAVGASSYL--GKNIISVLPSQQILFFPQGVVMSFYGIAGLFISAYL 80 Query: 492 WYKAVQTANKDAEEQDRRDG 551 W + + DR++G Sbjct: 81 WCTILWNVGSGYDRFDRKEG 100
>Q6L602:YCF4_AEGSP Photosystem I assembly protein ycf4 - Aegilops speltoides| (Goatgrass) Length = 185 Score = 30.8 bits (68), Expect = 7.7 Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 3/82 (3%) Frame = +3 Query: 321 FYAYLLASAVTAIAAIGSIFEYTNGRPVFGVVGTDSPLYAP---ILGFFAVTGIPTSGYL 491 F+A +L ++G I Y G+ + ++ + L+ P ++ F+ + G+ S YL Sbjct: 23 FWACILFLGSLGFLSVG-ISSYL-GKNIISILPSQEILFFPQGVVMSFYGIAGLFISSYL 80 Query: 492 WYKAVQTANKDAEEQDRRDGFL 557 W + + DR++G + Sbjct: 81 WCTILWNVGSGYDRFDRKEGIV 102
>P62719:YCF4_AEGCR Photosystem I assembly protein ycf4 - Aegilops crassa (Persian| goatgrass) Length = 185 Score = 30.8 bits (68), Expect = 7.7 Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 3/82 (3%) Frame = +3 Query: 321 FYAYLLASAVTAIAAIGSIFEYTNGRPVFGVVGTDSPLYAP---ILGFFAVTGIPTSGYL 491 F+A +L ++G I Y G+ + ++ + L+ P ++ F+ + G+ S YL Sbjct: 23 FWACILFLGSLGFLSVG-ISSYL-GKNIISILPSQEILFFPQGVVMSFYGIAGLFISSYL 80 Query: 492 WYKAVQTANKDAEEQDRRDGFL 557 W + + DR++G + Sbjct: 81 WCTILWNVGSGYDRFDRKEGIV 102
>P26371:KRA59_HUMAN Keratin-associated protein 5-9 - Homo sapiens (Human)| Length = 169 Score = 30.8 bits (68), Expect = 7.8 Identities = 14/33 (42%), Positives = 14/33 (42%) Frame = -2 Query: 684 PCCCFSQC*PICSAGSACSPSTKNGYYDICSAC 586 PCCC S C C S C P Y CS C Sbjct: 85 PCCCSSGCGSSCCQCSCCKP-----YCSQCSCC 112
>Q6L8H4:KRA51_HUMAN Keratin-associated protein 5-1 - Homo sapiens (Human)| Length = 278 Score = 30.8 bits (68), Expect = 7.8 Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 2/37 (5%) Frame = -2 Query: 684 PCCCFSQC*PICSAGSACSP--STKNGYYDICSACSL 580 PCCC S C C S C P S + +C C + Sbjct: 242 PCCCSSGCGSSCCQSSCCKPCCSQSSCCVPVCCQCKI 278 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 119,779,790 Number of extensions: 2446357 Number of successful extensions: 7592 Number of sequences better than 10.0: 16 Number of HSP's gapped: 7556 Number of HSP's successfully gapped: 18 Length of query: 299 Length of database: 100,686,439 Length adjustment: 112 Effective length of query: 187 Effective length of database: 69,965,399 Effective search space: 13083529613 Effective search space used: 13083529613 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
