>Q78JW9:UBFD1_MOUSE Ubiquitin domain-containing protein UBFD1 - Mus musculus (Mouse)|
          Length = 368
 Score = 33.9 bits (76), Expect = 2.0
 Identities = 20/81 (24%), Positives = 36/81 (44%)
 Frame = +1

Query: 367 PSGMLVQKRTPDSDPPPGGAPVPTIRVKVKYAGVYHEVYINSQASFGELKKLMSEKTGLH 546
           P     Q    + +   GG     + +K+ +    H+V +   ++  ELK+ +   TGL 
Sbjct: 121 PGDPAAQASVSNGEDAGGGVGKELVDLKIIWNKTKHDVKVPLDSTGSELKQKIHSITGLP 180

Query: 547 PDDQKVVYKDRERDSKAFLDM 609
           P  QKV+YK    + K   ++
Sbjct: 181 PAMQKVMYKGLVPEDKTLREI 201

>O14562:UBFD1_HUMAN Ubiquitin domain-containing protein UBFD1 - Homo sapiens (Human)|
          Length = 533

 Score = 33.9 bits (76), Expect = 2.0
 Identities = 21/81 (25%), Positives = 36/81 (44%)
 Frame = +1

Query: 367 PSGMLVQKRTPDSDPPPGGAPVPTIRVKVKYAGVYHEVYINSQASFGELKKLMSEKTGLH 546
           P     Q    + +   GGA    + +K+ +    H+V     ++  ELK+ +   TGL 
Sbjct: 286 PGDPAAQASVSNGEDAGGGAGRELVDLKIIWNKTKHDVKFPLDSTGSELKQKIHSITGLP 345

Query: 547 PDDQKVVYKDRERDSKAFLDM 609
           P  QKV+YK    + K   ++
Sbjct: 346 PAMQKVMYKGLVPEDKTLREI 366

>P03290:Y115_ADE02 Hypothetical protein E-115 - Human adenovirus 2 (HAdV-2)|
          Length = 115

 Score = 32.7 bits (73), Expect = 4.5
 Identities = 22/71 (30%), Positives = 27/71 (38%)
 Frame = -1

Query: 1300 PMNVYTHVAGGWPHPAGTSRRAPTRTSGTARWWSRAPWWTPVPMTMKRARRTAGRTYPSW 1121
            P+ V T      P  A  + RA  R   T   WS A W T    T   +      +   W
Sbjct: 45   PLKVCTAPRAAPPPRASCAPRATPRRGWTMTPWSNATWPTRRAKTGSASAPAGPASSAPW 104

Query: 1120 PSRSVARGRSP 1088
            P+RS  R  SP
Sbjct: 105  PARSPERTPSP 115

>Q5T5P2:SKT_HUMAN Sickle tail protein homolog - Homo sapiens (Human)|
          Length = 1943

 Score = 32.3 bits (72), Expect = 5.9
 Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 2/153 (1%)
 Frame = +1

Query: 382  VQKRTPDSDPPPGGAPVPTIRVKVKYAGVYHEVYINSQASFGELKKLMSEKTGLHPDDQK 561
            ++   P S PPP G                H   +  + S  EL+  + +   L   +Q+
Sbjct: 625  LESTVPPSQPPPVGT------------SAIHMSLLEMRRSVAELRLQLQQMRQLQLQNQE 672

Query: 562  VVYKDRERDSKAFLDMVGVKDRSKMTLLEDPTAQAKRLIEERRNXXXXXXXXXXXXXXLD 741
            ++   R    KA L++ G K    M  LEDP  + + L+E+ R                +
Sbjct: 673  LL---RAMMKKAELEISG-KVMETMKRLEDPVQRQRVLVEQERQKYLH-----------E 717

Query: 742  VDKLASKVSALETIVS--KGGKVVEADLVTLTE 834
             +K+  K+  LE  V   K      + LVTL +
Sbjct: 718  EEKIVKKLCELEDFVEDLKKDSTAASRLVTLKD 750


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 185,817,698
Number of extensions: 3601476
Number of successful extensions: 11432
Number of sequences better than 10.0: 4
Number of HSP's gapped: 11416
Number of HSP's successfully gapped: 4
Length of query: 539
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 421
Effective length of database: 68,319,629
Effective search space: 28762563809
Effective search space used: 28762563809
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)