ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf73g02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|DQ244169.1| Zea mays clone 2737 mRNA sequence 86 5e-13
2dbj|AK061368.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 2e-06
3emb|CT827958.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 52 0.007
4ref|NM_001054084.1| Oryza sativa (japonica cultivar-group) Os02g... 52 0.007
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.007
6emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4,... 52 0.007
7dbj|AK069956.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.007
8dbj|AK067764.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.007
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.10
10dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.10
11ref|NM_001059937.1| Oryza sativa (japonica cultivar-group) Os04g... 46 0.40
12gb|AC159504.5| Mus musculus 10 BAC RP23-302J6 (Roswell Park Canc... 46 0.40
13emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromosome 4,... 46 0.40
14dbj|AK109281.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.40
15gb|AC156390.3| Mus musculus 10 BAC RP24-280O23 (Roswell Park Can... 46 0.40
16gb|CP000454.1| Arthrobacter sp. FB24, complete genome 44 1.6
17gb|AC188059.1| Callithrix jacchus chromosome UNK clone CH259-54H... 44 1.6
18gb|AF319617.2| Castanea crenata agglutinin mRNA, complete cds 44 1.6
19gb|AC026394.11| Homo sapiens chromosome 10 clone RP11-427O20, co... 44 1.6
20dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 1.6
21gb|DQ344922.1| Castanea crenata agglutinin isoform mRNA, complet... 44 1.6
22dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic D... 44 1.6
23gb|AY967411.1| Castanea crenata agglutinin gene, partial cds 44 1.6
24gb|AC006443.1|AC006443 Homo sapiens chromosome 9, clone hRPK.49... 44 1.6
25gb|CP000482.1| Pelobacter propionicus DSM 2379, complete genome 42 6.3
26gb|CP000479.1| Mycobacterium avium 104, complete genome 42 6.3
27emb|CT831275.1| Oryza sativa (indica cultivar-group) cDNA clone:... 42 6.3
28gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome 42 6.3
29dbj|AK232512.1| Sus scrofa mRNA, clone:LVR010059D06, expressed i... 42 6.3
30ref|NM_001067214.1| Oryza sativa (japonica cultivar-group) Os07g... 42 6.3
31ref|NM_001054233.1| Oryza sativa (japonica cultivar-group) Os02g... 42 6.3
32ref|NM_001049970.1| Oryza sativa (japonica cultivar-group) Os01g... 42 6.3
33gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete ... 42 6.3
34ref|XR_024492.1| PREDICTED: Pan troglodytes similar to DNA polym... 42 6.3
35gb|CP000435.1| Synechococcus sp. CC9311, complete genome 42 6.3
36emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete se... 42 6.3
37gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome 42 6.3
38gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome 42 6.3
39emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 6.3
40gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 6.3
41gb|AY684169.1| Homo sapiens REV3-like, catalytic subunit of DNA ... 42 6.3
42gb|AY658970.1| Synthetic construct Peudomonas aeruginosa clone F... 42 6.3
43gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 6.3
44gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome ... 42 6.3
45emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 42 6.3
46dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 6.3
47emb|AL136310.15| Human DNA sequence from clone RP3-415N12 on chr... 42 6.3
48dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic D... 42 6.3
49dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 42 6.3
50emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 6.3
51emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ... 42 6.3
52emb|AL713994.15| Mouse DNA sequence from clone RP23-378H5 on chr... 42 6.3
53dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic D... 42 6.3
54dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 6.3
55dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 6.3
56gb|BC035823.1| Homo sapiens, Similar to REV3-like, catalytic sub... 42 6.3
57dbj|AK109758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 6.3
58dbj|AK103037.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 6.3
59dbj|AK100120.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 6.3
60dbj|AK064532.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 6.3
61gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 6.3
62gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 6.3
63gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 42 6.3
64gb|AF071798.1|AF071798 Homo sapiens DNA polymerase zeta catalyti... 42 6.3
65ref|NM_002912.1| Homo sapiens REV3-like, catalytic subunit of DN... 42 6.3
66emb|AL929275.8| Mouse DNA sequence from clone RP23-65P13 on chro... 42 6.3
67emb|AL732633.6| Mouse DNA sequence from clone RP23-320E20 on chr... 42 6.3

>gb|DQ244169.1| Zea mays clone 2737 mRNA sequence
          Length = 1130
 Score = 85.7 bits (43), Expect = 5e-13
 Identities = 117/141 (82%), Gaps = 3/141 (2%)
 Strand = Plus / Plus

                                                                        
Query: 1243 ctggagcgccgcgggtggccggctgacacggtgtatgcggcctacatggcgtccaaggcg 1302
            ||||||| |||||| |||||| | |||  |||||| ||||| |||  || ||||||||||
Sbjct: 741  ctggagccccgcggatggccgaccgaccgggtgtacgcggcgtaccaggtgtccaaggcg 800

                                                                        
Query: 1303 ctggtgtgcgcctacaccagggtgatcgccagggaggagggcgccgcgctgcgggtcaac 1362
            || || | ||||||| |||||||  ||||||||||  |   | |||||||||||||||||
Sbjct: 801  cttgtctccgcctacgccagggtcctcgccagggacaa---ccccgcgctgcgggtcaac 857

                                 
Query: 1363 tgcgtgcaccccggctacgtc 1383
            ||||||||||| |||||||||
Sbjct: 858  tgcgtgcacccgggctacgtc 878



 Score = 69.9 bits (35), Expect = 3e-08
 Identities = 122/151 (80%)
 Strand = Plus / Plus

                                                                        
Query: 1071 ctcctcctccgacggcagagtcgtcaacgtaacctcagcctgggggctgctcaggtattt 1130
            ||||||||||| ||| ||  |||||||||| || ||| | |  || || ||||||| |||
Sbjct: 575  ctcctcctccggcgggaggatcgtcaacgtcacttcatctttcggcctactcaggttttt 634

                                                                        
Query: 1131 cagtggcgaggagctccggcgggagctggacgacgtcgacaacctcacgacgcagcggct 1190
            ||| |||||||||||||||| |||||||  |  ||||||||  || || |||||||| ||
Sbjct: 635  cagcggcgaggagctccggcaggagctgagcagcgtcgacacgctgaccacgcagcgcct 694

                                           
Query: 1191 cgacaagatgtcggccctgttcctcgaggac 1221
             ||| || ||||||| |||||||| ||||||
Sbjct: 695  ggacgagctgtcggcgctgttcctggaggac 725



 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                        
Query: 964  tggctgaggcaacggaccacgcagaccacccaggatgcagaggactgcctgaggatcaac 1023
            ||||||| ||| ||||||||||||| | || || | || ||||| ||| | |||||||||
Sbjct: 456  tggctgaagcagcggaccacgcagagcgccgagcaagcggaggaatgcgtcaggatcaac 515

                                      
Query: 1024 taccacggcaacaagaccgtcacgga 1049
            ||||||| || ||| |||||||||||
Sbjct: 516  taccacgtcaccaaaaccgtcacgga 541



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                               
Query: 1466 aggggggcgtcaccggcgcctacttcgatcgcact 1500
            |||| |||||||||||||| |||||||||||||||
Sbjct: 961  agggcggcgtcaccggcgcttacttcgatcgcact 995



 Score = 52.0 bits (26), Expect = 0.007
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 640 gggaatcgggggatggggctggagatatgccggcagctggcg 681
           ||||| ||||| |||||| | |||||||||||||||||||||
Sbjct: 129 gggaaccggggcatggggttcgagatatgccggcagctggcg 170



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>dbj|AK061368.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-D09, full
           insert sequence
          Length = 1102

 Score = 63.9 bits (32), Expect = 2e-06
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 840 caagttcggcaagcttgacatattggtaaacaatgcagga 879
           |||||| |||||||||||||||||||| ||||||||||||
Sbjct: 328 caagtttggcaagcttgacatattggtcaacaatgcagga 367



 Score = 52.0 bits (26), Expect = 0.007
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                       
Query: 613 gagaaaagggttgcggtggtgaccggagggaatcgggggatggggctggagatatgccgg 672
           |||||||||||||| |||||||| ||||||||    ||  | ||||| |||||||||  |
Sbjct: 101 gagaaaagggttgcagtggtgacaggagggaacaaaggacttgggctcgagatatgcaag 160

                                                     
Query: 673 cagctggcggagcacggggtcaccgtcgtcttgacggcgagg 714
           |||||||| |   | || ||||||||||||||||| ||||||
Sbjct: 161 cagctggctgccaatggagtcaccgtcgtcttgacagcgagg 202



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>emb|CT827958.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0125M19,
             complete sequence
          Length = 84482

 Score = 52.0 bits (26), Expect = 0.007
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 1350  gctgcgggtcaactgcgtgcaccccggctacgtc 1383
             |||||| ||||||||||||||||| |||||||||
Sbjct: 39100 gctgcgcgtcaactgcgtgcacccgggctacgtc 39133



 Score = 46.1 bits (23), Expect = 0.40
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                         
Query: 648   ggggatggggctggagatatgccggcagctggcggagcacggggtcaccgtcgtcttgac 707
             |||||| ||||||||| | |||||||||||||| |   |||| | ||||||||| |||||
Sbjct: 67612 ggggatcgggctggaggtgtgccggcagctggccggcaacggcgccaccgtcgttttgac 67553

                        
Query: 708   ggcgagggacg 718
              || |||||||
Sbjct: 67552 agccagggacg 67542



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>ref|NM_001054084.1| Oryza sativa (japonica cultivar-group) Os02g0640800 (Os02g0640800)
            mRNA, complete cds
          Length = 2746

 Score = 52.0 bits (26), Expect = 0.007
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                        
Query: 613  gagaaaagggttgcggtggtgaccggagggaatcgggggatggggctggagatatgccgg 672
            |||||||||||||| |||||||| ||||||||    ||  | ||||| |||||||||  |
Sbjct: 1587 gagaaaagggttgcagtggtgacaggagggaacaaaggacttgggctcgagatatgcaag 1646

                                                      
Query: 673  cagctggcggagcacggggtcaccgtcgtcttgacggcgagg 714
            |||||||| |   | || ||||||||||||||||| ||||||
Sbjct: 1647 cagctggctgccaatggagtcaccgtcgtcttgacagcgagg 1688



 Score = 44.1 bits (22), Expect = 1.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 840  caagttcggcaagcttgacatattgg 865
            |||||| |||||||||||||||||||
Sbjct: 1814 caagtttggcaagcttgacatattgg 1839



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 52.0 bits (26), Expect = 0.007
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                  
Query: 1350     gctgcgggtcaactgcgtgcaccccggctacgtc 1383
                |||||| ||||||||||||||||| |||||||||
Sbjct: 26558212 gctgcgcgtcaactgcgtgcacccgggctacgtc 26558245



 Score = 46.1 bits (23), Expect = 0.40
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                            
Query: 648      ggggatggggctggagatatgccggcagctggcggagcacggggtcaccgtcgtcttgac 707
                |||||| ||||||||| | |||||||||||||| |   |||| | ||||||||| |||||
Sbjct: 26586697 ggggatcgggctggaggtgtgccggcagctggccggcaacggcgccaccgtcgttttgac 26586638

                           
Query: 708      ggcgagggacg 718
                 || |||||||
Sbjct: 26586637 agccagggacg 26586627



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>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01,
             complete sequence
          Length = 140454

 Score = 52.0 bits (26), Expect = 0.007
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 1350  gctgcgggtcaactgcgtgcaccccggctacgtc 1383
             |||||| ||||||||||||||||| |||||||||
Sbjct: 95098 gctgcgcgtcaactgcgtgcacccgggctacgtc 95131



 Score = 46.1 bits (23), Expect = 0.40
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                          
Query: 648    ggggatggggctggagatatgccggcagctggcggagcacggggtcaccgtcgtcttgac 707
              |||||| ||||||||| | |||||||||||||| |   |||| | ||||||||| |||||
Sbjct: 123583 ggggatcgggctggaggtgtgccggcagctggccggcaacggcgccaccgtcgttttgac 123524

                         
Query: 708    ggcgagggacg 718
               || |||||||
Sbjct: 123523 agccagggacg 123513



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>dbj|AK069956.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036L11, full
            insert sequence
          Length = 2747

 Score = 52.0 bits (26), Expect = 0.007
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                        
Query: 613  gagaaaagggttgcggtggtgaccggagggaatcgggggatggggctggagatatgccgg 672
            |||||||||||||| |||||||| ||||||||    ||  | ||||| |||||||||  |
Sbjct: 1588 gagaaaagggttgcagtggtgacaggagggaacaaaggacttgggctcgagatatgcaag 1647

                                                      
Query: 673  cagctggcggagcacggggtcaccgtcgtcttgacggcgagg 714
            |||||||| |   | || ||||||||||||||||| ||||||
Sbjct: 1648 cagctggctgccaatggagtcaccgtcgtcttgacagcgagg 1689



 Score = 44.1 bits (22), Expect = 1.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 840  caagttcggcaagcttgacatattgg 865
            |||||| |||||||||||||||||||
Sbjct: 1815 caagtttggcaagcttgacatattgg 1840



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>dbj|AK067764.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119E06, full
            insert sequence
          Length = 1945

 Score = 52.0 bits (26), Expect = 0.007
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                        
Query: 613  gagaaaagggttgcggtggtgaccggagggaatcgggggatggggctggagatatgccgg 672
            |||||||||||||| |||||||| ||||||||    ||  | ||||| |||||||||  |
Sbjct: 1514 gagaaaagggttgcagtggtgacaggagggaacaaaggacttgggctcgagatatgcaag 1573

                                                      
Query: 673  cagctggcggagcacggggtcaccgtcgtcttgacggcgagg 714
            |||||||| |   | || ||||||||||||||||| ||||||
Sbjct: 1574 cagctggctgccaatggagtcaccgtcgtcttgacagcgagg 1615



 Score = 48.1 bits (24), Expect = 0.10
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 840  caagttcggcaagcttgacatattggta 867
            |||||| |||||||||||||||||||||
Sbjct: 1741 caagtttggcaagcttgacatattggta 1768



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.10
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 840      caagttcggcaagcttgacatattggta 867
                |||||| |||||||||||||||||||||
Sbjct: 25753378 caagtttggcaagcttgacatattggta 25753405



 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 1138     gaggagctccggcgggagctg 1158
                |||||||||||||||||||||
Sbjct: 27267456 gaggagctccggcgggagctg 27267436



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>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0010C01
          Length = 186185

 Score = 48.1 bits (24), Expect = 0.10
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 840    caagttcggcaagcttgacatattggta 867
              |||||| |||||||||||||||||||||
Sbjct: 156054 caagtttggcaagcttgacatattggta 156081



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>ref|NM_001059937.1| Oryza sativa (japonica cultivar-group) Os04g0532100 (Os04g0532100)
           mRNA, complete cds
          Length = 1244

 Score = 46.1 bits (23), Expect = 0.40
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 648 ggggatggggctggagatatgccggcagctggcggagcacggggtcaccgtcgtcttgac 707
           |||||| ||||||||| | |||||||||||||| |   |||| | ||||||||| |||||
Sbjct: 122 ggggatcgggctggaggtgtgccggcagctggccggcaacggcgccaccgtcgttttgac 181

                      
Query: 708 ggcgagggacg 718
            || |||||||
Sbjct: 182 agccagggacg 192



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>gb|AC159504.5| Mus musculus 10 BAC RP23-302J6 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 201259

 Score = 46.1 bits (23), Expect = 0.40
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 569    caggactagaagacacaatggaa 591
              |||||||||||||||||||||||
Sbjct: 119405 caggactagaagacacaatggaa 119427



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>emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039L24,
             complete sequence
          Length = 121056

 Score = 46.1 bits (23), Expect = 0.40
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                         
Query: 648   ggggatggggctggagatatgccggcagctggcggagcacggggtcaccgtcgtcttgac 707
             |||||| ||||||||| | |||||||||||||| |   |||| | ||||||||| |||||
Sbjct: 26255 ggggatcgggctggaggtgtgccggcagctggccggcaacggcgccaccgtcgttttgac 26196

                        
Query: 708   ggcgagggacg 718
              || |||||||
Sbjct: 26195 agccagggacg 26185



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>dbj|AK109281.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-B09, full
           insert sequence
          Length = 1245

 Score = 46.1 bits (23), Expect = 0.40
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 648 ggggatggggctggagatatgccggcagctggcggagcacggggtcaccgtcgtcttgac 707
           |||||| ||||||||| | |||||||||||||| |   |||| | ||||||||| |||||
Sbjct: 122 ggggatcgggctggaggtgtgccggcagctggccggcaacggcgccaccgtcgttttgac 181

                      
Query: 708 ggcgagggacg 718
            || |||||||
Sbjct: 182 agccagggacg 192



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>gb|AC156390.3| Mus musculus 10 BAC RP24-280O23 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 158038

 Score = 46.1 bits (23), Expect = 0.40
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 569    caggactagaagacacaatggaa 591
              |||||||||||||||||||||||
Sbjct: 156756 caggactagaagacacaatggaa 156734



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>gb|CP000454.1| Arthrobacter sp. FB24, complete genome
          Length = 4698945

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1219  gacctgggcaagggcaatggcg 1240
             ||||||||||||||||||||||
Sbjct: 26277 gacctgggcaagggcaatggcg 26298



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>gb|AC188059.1| Callithrix jacchus chromosome UNK clone CH259-54H12, complete sequence
          Length = 165162

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1552   ctatctttttcaataaagttca 1573
              ||||||||||||||||||||||
Sbjct: 137548 ctatctttttcaataaagttca 137527



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>gb|AF319617.2| Castanea crenata agglutinin mRNA, complete cds
          Length = 1354

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1206 cctgttcctcgaggacctgggc 1227
            ||||||||||||||||||||||
Sbjct: 538  cctgttcctcgaggacctgggc 559



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>gb|AC026394.11| Homo sapiens chromosome 10 clone RP11-427O20, complete sequence
          Length = 174186

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1552  ctatctttttcaataaagttca 1573
             ||||||||||||||||||||||
Sbjct: 28529 ctatctttttcaataaagttca 28550



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 667      tgccggcagctggcggagcacg 688
                ||||||||||||||||||||||
Sbjct: 19990461 tgccggcagctggcggagcacg 19990440



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>gb|DQ344922.1| Castanea crenata agglutinin isoform mRNA, complete cds
          Length = 1348

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1206 cctgttcctcgaggacctgggc 1227
            ||||||||||||||||||||||
Sbjct: 532  cctgttcctcgaggacctgggc 553



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>dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1018E06
          Length = 178499

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 667    tgccggcagctggcggagcacg 688
              ||||||||||||||||||||||
Sbjct: 128801 tgccggcagctggcggagcacg 128780



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>gb|AY967411.1| Castanea crenata agglutinin gene, partial cds
          Length = 1592

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1206 cctgttcctcgaggacctgggc 1227
            ||||||||||||||||||||||
Sbjct: 911  cctgttcctcgaggacctgggc 932



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>gb|AC006443.1|AC006443 Homo sapiens chromosome 9, clone  hRPK.494_N_15, complete sequence
          Length = 210636

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1421   ccgcggagggagccgccgccgc 1442
              ||||||||||||||||||||||
Sbjct: 182981 ccgcggagggagccgccgccgc 182960



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>gb|CP000482.1| Pelobacter propionicus DSM 2379, complete genome
          Length = 4008000

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 992    cccaggatgcagaggactgcc 1012
              |||||||||||||||||||||
Sbjct: 257723 cccaggatgcagaggactgcc 257743



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>gb|CP000479.1| Mycobacterium avium 104, complete genome
          Length = 5475491

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 1354    cgggtcaactgcgtgcaccccggct 1378
               |||||||||| ||||||||||||||
Sbjct: 5287832 cgggtcaactccgtgcaccccggct 5287808



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>emb|CT831275.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA105I04, full
            insert sequence
          Length = 1376

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1138 gaggagctccggcgggagctg 1158
            |||||||||||||||||||||
Sbjct: 135  gaggagctccggcgggagctg 115



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>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome
          Length = 6537648

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1214    tcgaggacctgggcaagggca 1234
               |||||||||||||||||||||
Sbjct: 1161684 tcgaggacctgggcaagggca 1161664



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>dbj|AK232512.1| Sus scrofa mRNA, clone:LVR010059D06, expressed in liver
          Length = 2077

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 372 tgcctcgccctcctgtcctgc 392
           |||||||||||||||||||||
Sbjct: 278 tgcctcgccctcctgtcctgc 258



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>ref|NM_001067214.1| Oryza sativa (japonica cultivar-group) Os07g0685800 (Os07g0685800)
           mRNA, complete cds
          Length = 1310

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 850 aagcttgacatattggtaaacaatgcagg 878
           ||||||||||| ||||| |||||||||||
Sbjct: 499 aagcttgacatcttggtgaacaatgcagg 527



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>ref|NM_001054233.1| Oryza sativa (japonica cultivar-group) Os02g0671100 (Os02g0671100)
            mRNA, complete cds
          Length = 2620

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1138 gaggagctccggcgggagctg 1158
            |||||||||||||||||||||
Sbjct: 113  gaggagctccggcgggagctg 93



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>ref|NM_001049970.1| Oryza sativa (japonica cultivar-group) Os01g0588500 (Os01g0588500)
            mRNA, complete cds
          Length = 2498

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 1419 cgccgcggagggagccgccgccgcg 1443
            ||||||||||| |||||||||||||
Sbjct: 109  cgccgcggaggaagccgccgccgcg 85



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>gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete sequence
          Length = 3556545

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 513    gcgcgcgtgcggcatcgacca 533
              |||||||||||||||||||||
Sbjct: 761439 gcgcgcgtgcggcatcgacca 761419



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>ref|XR_024492.1| PREDICTED: Pan troglodytes similar to DNA polymerase zeta catalytic
            subunit (REV3L), mRNA
          Length = 10946

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1418 ccgccgcggagggagccgccgccgc 1442
            |||| ||||||||||||||||||||
Sbjct: 243  ccgctgcggagggagccgccgccgc 267



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>gb|CP000435.1| Synechococcus sp. CC9311, complete genome
          Length = 2606748

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 724     cggggtgctgaggcagcagaa 744
               |||||||||||||||||||||
Sbjct: 2338969 cggggtgctgaggcagcagaa 2338989



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>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence
          Length = 7497934

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 686     acggggtcaccgtcgtcttga 706
               |||||||||||||||||||||
Sbjct: 6683790 acggggtcaccgtcgtcttga 6683810



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>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome
          Length = 6264404

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 1214    tcgaggacctgggcaagggca 1234
               |||||||||||||||||||||
Sbjct: 4363972 tcgaggacctgggcaagggca 4363992



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>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome
          Length = 3225748

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 649    gggatggggctggagatatgccggcagct 677
              ||||| ||||||||||| |||||||||||
Sbjct: 547476 gggatagggctggagatctgccggcagct 547504



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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1211    tcctcgaggacctgggcaagg 1231
               |||||||||||||||||||||
Sbjct: 3551663 tcctcgaggacctgggcaagg 3551643



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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 342     cgcagctcgcctcgtcctgcg 362
               |||||||||||||||||||||
Sbjct: 2946648 cgcagctcgcctcgtcctgcg 2946668



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>gb|AY684169.1| Homo sapiens REV3-like, catalytic subunit of DNA polymerase zeta
            (yeast) (REV3L) gene, complete cds
          Length = 188355

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1418 ccgccgcggagggagccgccgccgc 1442
            |||| ||||||||||||||||||||
Sbjct: 2688 ccgctgcggagggagccgccgccgc 2712



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>gb|AY658970.1| Synthetic construct Peudomonas aeruginosa clone FLH042492.01F PA3895
            gene, partial cds
          Length = 954

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1214 tcgaggacctgggcaagggca 1234
            |||||||||||||||||||||
Sbjct: 743  tcgaggacctgggcaagggca 763



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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 342   cgcagctcgcctcgtcctgcg 362
             |||||||||||||||||||||
Sbjct: 74083 cgcagctcgcctcgtcctgcg 74103



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>gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome 8, complete sequence
          Length = 218698

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 214   ccctagcctcctctgtcgccc 234
             |||||||||||||||||||||
Sbjct: 54025 ccctagcctcctctgtcgccc 54045



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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1361   actgcgtgcaccccggctacg 1381
              |||||||||||||||||||||
Sbjct: 487109 actgcgtgcaccccggctacg 487089



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 1419     cgccgcggagggagccgccgccgcg 1443
                ||||||||||| |||||||||||||
Sbjct: 22919742 cgccgcggaggaagccgccgccgcg 22919766



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>emb|AL136310.15| Human DNA sequence from clone RP3-415N12 on chromosome 6, complete
             sequence
          Length = 39889

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1418  ccgccgcggagggagccgccgccgc 1442
             |||| ||||||||||||||||||||
Sbjct: 25452 ccgctgcggagggagccgccgccgc 25428



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>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0700A11
          Length = 136321

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1419   cgccgcggagggagccgccgccgcg 1443
              ||||||||||| |||||||||||||
Sbjct: 123299 cgccgcggaggaagccgccgccgcg 123323



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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 854     ttgacatattggtaaacaatgcagg 878
               ||||||||||||| |||||||||||
Sbjct: 1429824 ttgacatattggttaacaatgcagg 1429848



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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 342     cgcagctcgcctcgtcctgcg 362
               |||||||||||||||||||||
Sbjct: 3919685 cgcagctcgcctcgtcctgcg 3919705



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>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1404 caccggcgtcctcaccgccgc 1424
            |||||||||||||||||||||
Sbjct: 2798 caccggcgtcctcaccgccgc 2818



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>emb|AL713994.15| Mouse DNA sequence from clone RP23-378H5 on chromosome 11 Contains the 5'
              end of the Arf-1 gene for ADP-ribosylation factor 1, the
              Wnt3a gene for wingless-related MMTV integration site 3A,
              the Wnt9a gene for wingless-type MMTV integration site 9A,
              two novel genes, the 5' end of a novel gene and five CpG
              islands, complete sequence
          Length = 225396

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1057   ctgccgctcctccgctcctcc 1077
              |||||||||||||||||||||
Sbjct: 217411 ctgccgctcctccgctcctcc 217431



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>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0684A08
          Length = 137841

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1138   gaggagctccggcgggagctg 1158
              |||||||||||||||||||||
Sbjct: 118127 gaggagctccggcgggagctg 118107



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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1285    tacatggcgtccaaggcgctg 1305
               |||||||||||||||||||||
Sbjct: 6352383 tacatggcgtccaaggcgctg 6352363



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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 1416    caccgccgcggagggagccgccgccgcgg 1444
               ||||||||||||||  |||||||||||||
Sbjct: 3958952 caccgccgcggaggtcgccgccgccgcgg 3958980



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>gb|BC035823.1| Homo sapiens, Similar to REV3-like, catalytic subunit of DNA
            polymerase zeta RAD54 like (S. cerevisiae), clone
            IMAGE:5551831, mRNA, partial cds
          Length = 2081

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1418 ccgccgcggagggagccgccgccgc 1442
            |||| ||||||||||||||||||||
Sbjct: 177  ccgctgcggagggagccgccgccgc 201



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>dbj|AK109758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-G06, full
            insert sequence
          Length = 2620

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1138 gaggagctccggcgggagctg 1158
            |||||||||||||||||||||
Sbjct: 113  gaggagctccggcgggagctg 93



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>dbj|AK103037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117E11, full
            insert sequence
          Length = 2501

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 1419 cgccgcggagggagccgccgccgcg 1443
            ||||||||||| |||||||||||||
Sbjct: 111  cgccgcggaggaagccgccgccgcg 87



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>dbj|AK100120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007K16, full
            insert sequence
          Length = 1231

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1138 gaggagctccggcgggagctg 1158
            |||||||||||||||||||||
Sbjct: 129  gaggagctccggcgggagctg 109



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>dbj|AK064532.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-111-H04, full
           insert sequence
          Length = 1310

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 850 aagcttgacatattggtaaacaatgcagg 878
           ||||||||||| ||||| |||||||||||
Sbjct: 499 aagcttgacatcttggtgaacaatgcagg 527



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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 342     cgcagctcgcctcgtcctgcg 362
               |||||||||||||||||||||
Sbjct: 3623198 cgcagctcgcctcgtcctgcg 3623218



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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 1354    cgggtcaactgcgtgcaccccggct 1378
               |||||||||| ||||||||||||||
Sbjct: 3976315 cgggtcaactccgtgcaccccggct 3976339



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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 143     cagcccggcgcccggcgcccg 163
               |||||||||||||||||||||
Sbjct: 2082545 cagcccggcgcccggcgcccg 2082525



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>gb|AF071798.1|AF071798 Homo sapiens DNA polymerase zeta catalytic subunit (REV3) mRNA,
            complete cds
          Length = 10716

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1418 ccgccgcggagggagccgccgccgc 1442
            |||| ||||||||||||||||||||
Sbjct: 243  ccgctgcggagggagccgccgccgc 267



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>ref|NM_002912.1| Homo sapiens REV3-like, catalytic subunit of DNA polymerase zeta
            (yeast) (REV3L), mRNA
 gb|AF078695.1|AF078695 Homo sapiens DNA polymerase zeta catalytic subunit (REV3L) mRNA,
            complete cds
          Length = 10919

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 1418 ccgccgcggagggagccgccgccgc 1442
            |||| ||||||||||||||||||||
Sbjct: 380  ccgctgcggagggagccgccgccgc 404



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>emb|AL929275.8| Mouse DNA sequence from clone RP23-65P13 on chromosome 2, complete
              sequence
          Length = 197356

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 173    gctcccctctccctctaatcc 193
              |||||||||||||||||||||
Sbjct: 162552 gctcccctctccctctaatcc 162572



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>emb|AL732633.6| Mouse DNA sequence from clone RP23-320E20 on chromosome 11, complete
             sequence
          Length = 99697

 Score = 42.1 bits (21), Expect = 6.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 725   ggggtgctgaggcagcagaaaggct 749
             ||||||||||||||| |||||||||
Sbjct: 48457 ggggtgctgaggcaggagaaaggct 48433


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 250,654,434
Number of extensions: 15224798
Number of successful extensions: 304554
Number of sequences better than 10.0: 67
Number of HSP's gapped: 304553
Number of HSP's successfully gapped: 80
Length of query: 1655
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1632
Effective length of database: 18,503,978,556
Effective search space: 30198493003392
Effective search space used: 30198493003392
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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