| Clone Name | FLbaf73g02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ244169.1| Zea mays clone 2737 mRNA sequence Length = 1130 Score = 85.7 bits (43), Expect = 5e-13 Identities = 117/141 (82%), Gaps = 3/141 (2%) Strand = Plus / Plus Query: 1243 ctggagcgccgcgggtggccggctgacacggtgtatgcggcctacatggcgtccaaggcg 1302 ||||||| |||||| |||||| | ||| |||||| ||||| ||| || |||||||||| Sbjct: 741 ctggagccccgcggatggccgaccgaccgggtgtacgcggcgtaccaggtgtccaaggcg 800 Query: 1303 ctggtgtgcgcctacaccagggtgatcgccagggaggagggcgccgcgctgcgggtcaac 1362 || || | ||||||| ||||||| |||||||||| | | ||||||||||||||||| Sbjct: 801 cttgtctccgcctacgccagggtcctcgccagggacaa---ccccgcgctgcgggtcaac 857 Query: 1363 tgcgtgcaccccggctacgtc 1383 ||||||||||| ||||||||| Sbjct: 858 tgcgtgcacccgggctacgtc 878 Score = 69.9 bits (35), Expect = 3e-08 Identities = 122/151 (80%) Strand = Plus / Plus Query: 1071 ctcctcctccgacggcagagtcgtcaacgtaacctcagcctgggggctgctcaggtattt 1130 ||||||||||| ||| || |||||||||| || ||| | | || || ||||||| ||| Sbjct: 575 ctcctcctccggcgggaggatcgtcaacgtcacttcatctttcggcctactcaggttttt 634 Query: 1131 cagtggcgaggagctccggcgggagctggacgacgtcgacaacctcacgacgcagcggct 1190 ||| |||||||||||||||| ||||||| | |||||||| || || |||||||| || Sbjct: 635 cagcggcgaggagctccggcaggagctgagcagcgtcgacacgctgaccacgcagcgcct 694 Query: 1191 cgacaagatgtcggccctgttcctcgaggac 1221 ||| || ||||||| |||||||| |||||| Sbjct: 695 ggacgagctgtcggcgctgttcctggaggac 725 Score = 60.0 bits (30), Expect = 3e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 964 tggctgaggcaacggaccacgcagaccacccaggatgcagaggactgcctgaggatcaac 1023 ||||||| ||| ||||||||||||| | || || | || ||||| ||| | ||||||||| Sbjct: 456 tggctgaagcagcggaccacgcagagcgccgagcaagcggaggaatgcgtcaggatcaac 515 Query: 1024 taccacggcaacaagaccgtcacgga 1049 ||||||| || ||| ||||||||||| Sbjct: 516 taccacgtcaccaaaaccgtcacgga 541 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1466 aggggggcgtcaccggcgcctacttcgatcgcact 1500 |||| |||||||||||||| ||||||||||||||| Sbjct: 961 agggcggcgtcaccggcgcttacttcgatcgcact 995 Score = 52.0 bits (26), Expect = 0.007 Identities = 38/42 (90%) Strand = Plus / Plus Query: 640 gggaatcgggggatggggctggagatatgccggcagctggcg 681 ||||| ||||| |||||| | ||||||||||||||||||||| Sbjct: 129 gggaaccggggcatggggttcgagatatgccggcagctggcg 170
>dbj|AK061368.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-D09, full insert sequence Length = 1102 Score = 63.9 bits (32), Expect = 2e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 840 caagttcggcaagcttgacatattggtaaacaatgcagga 879 |||||| |||||||||||||||||||| |||||||||||| Sbjct: 328 caagtttggcaagcttgacatattggtcaacaatgcagga 367 Score = 52.0 bits (26), Expect = 0.007 Identities = 83/102 (81%) Strand = Plus / Plus Query: 613 gagaaaagggttgcggtggtgaccggagggaatcgggggatggggctggagatatgccgg 672 |||||||||||||| |||||||| |||||||| || | ||||| ||||||||| | Sbjct: 101 gagaaaagggttgcagtggtgacaggagggaacaaaggacttgggctcgagatatgcaag 160 Query: 673 cagctggcggagcacggggtcaccgtcgtcttgacggcgagg 714 |||||||| | | || ||||||||||||||||| |||||| Sbjct: 161 cagctggctgccaatggagtcaccgtcgtcttgacagcgagg 202
>emb|CT827958.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0125M19, complete sequence Length = 84482 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1350 gctgcgggtcaactgcgtgcaccccggctacgtc 1383 |||||| ||||||||||||||||| ||||||||| Sbjct: 39100 gctgcgcgtcaactgcgtgcacccgggctacgtc 39133 Score = 46.1 bits (23), Expect = 0.40 Identities = 59/71 (83%) Strand = Plus / Minus Query: 648 ggggatggggctggagatatgccggcagctggcggagcacggggtcaccgtcgtcttgac 707 |||||| ||||||||| | |||||||||||||| | |||| | ||||||||| ||||| Sbjct: 67612 ggggatcgggctggaggtgtgccggcagctggccggcaacggcgccaccgtcgttttgac 67553 Query: 708 ggcgagggacg 718 || ||||||| Sbjct: 67552 agccagggacg 67542
>ref|NM_001054084.1| Oryza sativa (japonica cultivar-group) Os02g0640800 (Os02g0640800) mRNA, complete cds Length = 2746 Score = 52.0 bits (26), Expect = 0.007 Identities = 83/102 (81%) Strand = Plus / Plus Query: 613 gagaaaagggttgcggtggtgaccggagggaatcgggggatggggctggagatatgccgg 672 |||||||||||||| |||||||| |||||||| || | ||||| ||||||||| | Sbjct: 1587 gagaaaagggttgcagtggtgacaggagggaacaaaggacttgggctcgagatatgcaag 1646 Query: 673 cagctggcggagcacggggtcaccgtcgtcttgacggcgagg 714 |||||||| | | || ||||||||||||||||| |||||| Sbjct: 1647 cagctggctgccaatggagtcaccgtcgtcttgacagcgagg 1688 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 840 caagttcggcaagcttgacatattgg 865 |||||| ||||||||||||||||||| Sbjct: 1814 caagtttggcaagcttgacatattgg 1839
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1350 gctgcgggtcaactgcgtgcaccccggctacgtc 1383 |||||| ||||||||||||||||| ||||||||| Sbjct: 26558212 gctgcgcgtcaactgcgtgcacccgggctacgtc 26558245 Score = 46.1 bits (23), Expect = 0.40 Identities = 59/71 (83%) Strand = Plus / Minus Query: 648 ggggatggggctggagatatgccggcagctggcggagcacggggtcaccgtcgtcttgac 707 |||||| ||||||||| | |||||||||||||| | |||| | ||||||||| ||||| Sbjct: 26586697 ggggatcgggctggaggtgtgccggcagctggccggcaacggcgccaccgtcgttttgac 26586638 Query: 708 ggcgagggacg 718 || ||||||| Sbjct: 26586637 agccagggacg 26586627
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01, complete sequence Length = 140454 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1350 gctgcgggtcaactgcgtgcaccccggctacgtc 1383 |||||| ||||||||||||||||| ||||||||| Sbjct: 95098 gctgcgcgtcaactgcgtgcacccgggctacgtc 95131 Score = 46.1 bits (23), Expect = 0.40 Identities = 59/71 (83%) Strand = Plus / Minus Query: 648 ggggatggggctggagatatgccggcagctggcggagcacggggtcaccgtcgtcttgac 707 |||||| ||||||||| | |||||||||||||| | |||| | ||||||||| ||||| Sbjct: 123583 ggggatcgggctggaggtgtgccggcagctggccggcaacggcgccaccgtcgttttgac 123524 Query: 708 ggcgagggacg 718 || ||||||| Sbjct: 123523 agccagggacg 123513
>dbj|AK069956.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036L11, full insert sequence Length = 2747 Score = 52.0 bits (26), Expect = 0.007 Identities = 83/102 (81%) Strand = Plus / Plus Query: 613 gagaaaagggttgcggtggtgaccggagggaatcgggggatggggctggagatatgccgg 672 |||||||||||||| |||||||| |||||||| || | ||||| ||||||||| | Sbjct: 1588 gagaaaagggttgcagtggtgacaggagggaacaaaggacttgggctcgagatatgcaag 1647 Query: 673 cagctggcggagcacggggtcaccgtcgtcttgacggcgagg 714 |||||||| | | || ||||||||||||||||| |||||| Sbjct: 1648 cagctggctgccaatggagtcaccgtcgtcttgacagcgagg 1689 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 840 caagttcggcaagcttgacatattgg 865 |||||| ||||||||||||||||||| Sbjct: 1815 caagtttggcaagcttgacatattgg 1840
>dbj|AK067764.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119E06, full insert sequence Length = 1945 Score = 52.0 bits (26), Expect = 0.007 Identities = 83/102 (81%) Strand = Plus / Plus Query: 613 gagaaaagggttgcggtggtgaccggagggaatcgggggatggggctggagatatgccgg 672 |||||||||||||| |||||||| |||||||| || | ||||| ||||||||| | Sbjct: 1514 gagaaaagggttgcagtggtgacaggagggaacaaaggacttgggctcgagatatgcaag 1573 Query: 673 cagctggcggagcacggggtcaccgtcgtcttgacggcgagg 714 |||||||| | | || ||||||||||||||||| |||||| Sbjct: 1574 cagctggctgccaatggagtcaccgtcgtcttgacagcgagg 1615 Score = 48.1 bits (24), Expect = 0.10 Identities = 27/28 (96%) Strand = Plus / Plus Query: 840 caagttcggcaagcttgacatattggta 867 |||||| ||||||||||||||||||||| Sbjct: 1741 caagtttggcaagcttgacatattggta 1768
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 48.1 bits (24), Expect = 0.10 Identities = 27/28 (96%) Strand = Plus / Plus Query: 840 caagttcggcaagcttgacatattggta 867 |||||| ||||||||||||||||||||| Sbjct: 25753378 caagtttggcaagcttgacatattggta 25753405 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1138 gaggagctccggcgggagctg 1158 ||||||||||||||||||||| Sbjct: 27267456 gaggagctccggcgggagctg 27267436
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0010C01 Length = 186185 Score = 48.1 bits (24), Expect = 0.10 Identities = 27/28 (96%) Strand = Plus / Plus Query: 840 caagttcggcaagcttgacatattggta 867 |||||| ||||||||||||||||||||| Sbjct: 156054 caagtttggcaagcttgacatattggta 156081
>ref|NM_001059937.1| Oryza sativa (japonica cultivar-group) Os04g0532100 (Os04g0532100) mRNA, complete cds Length = 1244 Score = 46.1 bits (23), Expect = 0.40 Identities = 59/71 (83%) Strand = Plus / Plus Query: 648 ggggatggggctggagatatgccggcagctggcggagcacggggtcaccgtcgtcttgac 707 |||||| ||||||||| | |||||||||||||| | |||| | ||||||||| ||||| Sbjct: 122 ggggatcgggctggaggtgtgccggcagctggccggcaacggcgccaccgtcgttttgac 181 Query: 708 ggcgagggacg 718 || ||||||| Sbjct: 182 agccagggacg 192
>gb|AC159504.5| Mus musculus 10 BAC RP23-302J6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 201259 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 569 caggactagaagacacaatggaa 591 ||||||||||||||||||||||| Sbjct: 119405 caggactagaagacacaatggaa 119427
>emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039L24, complete sequence Length = 121056 Score = 46.1 bits (23), Expect = 0.40 Identities = 59/71 (83%) Strand = Plus / Minus Query: 648 ggggatggggctggagatatgccggcagctggcggagcacggggtcaccgtcgtcttgac 707 |||||| ||||||||| | |||||||||||||| | |||| | ||||||||| ||||| Sbjct: 26255 ggggatcgggctggaggtgtgccggcagctggccggcaacggcgccaccgtcgttttgac 26196 Query: 708 ggcgagggacg 718 || ||||||| Sbjct: 26195 agccagggacg 26185
>dbj|AK109281.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-B09, full insert sequence Length = 1245 Score = 46.1 bits (23), Expect = 0.40 Identities = 59/71 (83%) Strand = Plus / Plus Query: 648 ggggatggggctggagatatgccggcagctggcggagcacggggtcaccgtcgtcttgac 707 |||||| ||||||||| | |||||||||||||| | |||| | ||||||||| ||||| Sbjct: 122 ggggatcgggctggaggtgtgccggcagctggccggcaacggcgccaccgtcgttttgac 181 Query: 708 ggcgagggacg 718 || ||||||| Sbjct: 182 agccagggacg 192
>gb|AC156390.3| Mus musculus 10 BAC RP24-280O23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 158038 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Minus Query: 569 caggactagaagacacaatggaa 591 ||||||||||||||||||||||| Sbjct: 156756 caggactagaagacacaatggaa 156734
>gb|CP000454.1| Arthrobacter sp. FB24, complete genome Length = 4698945 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1219 gacctgggcaagggcaatggcg 1240 |||||||||||||||||||||| Sbjct: 26277 gacctgggcaagggcaatggcg 26298
>gb|AC188059.1| Callithrix jacchus chromosome UNK clone CH259-54H12, complete sequence Length = 165162 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1552 ctatctttttcaataaagttca 1573 |||||||||||||||||||||| Sbjct: 137548 ctatctttttcaataaagttca 137527
>gb|AF319617.2| Castanea crenata agglutinin mRNA, complete cds Length = 1354 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1206 cctgttcctcgaggacctgggc 1227 |||||||||||||||||||||| Sbjct: 538 cctgttcctcgaggacctgggc 559
>gb|AC026394.11| Homo sapiens chromosome 10 clone RP11-427O20, complete sequence Length = 174186 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1552 ctatctttttcaataaagttca 1573 |||||||||||||||||||||| Sbjct: 28529 ctatctttttcaataaagttca 28550
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 667 tgccggcagctggcggagcacg 688 |||||||||||||||||||||| Sbjct: 19990461 tgccggcagctggcggagcacg 19990440
>gb|DQ344922.1| Castanea crenata agglutinin isoform mRNA, complete cds Length = 1348 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1206 cctgttcctcgaggacctgggc 1227 |||||||||||||||||||||| Sbjct: 532 cctgttcctcgaggacctgggc 553
>dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1018E06 Length = 178499 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 667 tgccggcagctggcggagcacg 688 |||||||||||||||||||||| Sbjct: 128801 tgccggcagctggcggagcacg 128780
>gb|AY967411.1| Castanea crenata agglutinin gene, partial cds Length = 1592 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1206 cctgttcctcgaggacctgggc 1227 |||||||||||||||||||||| Sbjct: 911 cctgttcctcgaggacctgggc 932
>gb|AC006443.1|AC006443 Homo sapiens chromosome 9, clone hRPK.494_N_15, complete sequence Length = 210636 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1421 ccgcggagggagccgccgccgc 1442 |||||||||||||||||||||| Sbjct: 182981 ccgcggagggagccgccgccgc 182960
>gb|CP000482.1| Pelobacter propionicus DSM 2379, complete genome Length = 4008000 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 992 cccaggatgcagaggactgcc 1012 ||||||||||||||||||||| Sbjct: 257723 cccaggatgcagaggactgcc 257743
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1354 cgggtcaactgcgtgcaccccggct 1378 |||||||||| |||||||||||||| Sbjct: 5287832 cgggtcaactccgtgcaccccggct 5287808
>emb|CT831275.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA105I04, full insert sequence Length = 1376 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1138 gaggagctccggcgggagctg 1158 ||||||||||||||||||||| Sbjct: 135 gaggagctccggcgggagctg 115
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1214 tcgaggacctgggcaagggca 1234 ||||||||||||||||||||| Sbjct: 1161684 tcgaggacctgggcaagggca 1161664
>dbj|AK232512.1| Sus scrofa mRNA, clone:LVR010059D06, expressed in liver Length = 2077 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 372 tgcctcgccctcctgtcctgc 392 ||||||||||||||||||||| Sbjct: 278 tgcctcgccctcctgtcctgc 258
>ref|NM_001067214.1| Oryza sativa (japonica cultivar-group) Os07g0685800 (Os07g0685800) mRNA, complete cds Length = 1310 Score = 42.1 bits (21), Expect = 6.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 850 aagcttgacatattggtaaacaatgcagg 878 ||||||||||| ||||| ||||||||||| Sbjct: 499 aagcttgacatcttggtgaacaatgcagg 527
>ref|NM_001054233.1| Oryza sativa (japonica cultivar-group) Os02g0671100 (Os02g0671100) mRNA, complete cds Length = 2620 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1138 gaggagctccggcgggagctg 1158 ||||||||||||||||||||| Sbjct: 113 gaggagctccggcgggagctg 93
>ref|NM_001049970.1| Oryza sativa (japonica cultivar-group) Os01g0588500 (Os01g0588500) mRNA, complete cds Length = 2498 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1419 cgccgcggagggagccgccgccgcg 1443 ||||||||||| ||||||||||||| Sbjct: 109 cgccgcggaggaagccgccgccgcg 85
>gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete sequence Length = 3556545 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 513 gcgcgcgtgcggcatcgacca 533 ||||||||||||||||||||| Sbjct: 761439 gcgcgcgtgcggcatcgacca 761419
>ref|XR_024492.1| PREDICTED: Pan troglodytes similar to DNA polymerase zeta catalytic subunit (REV3L), mRNA Length = 10946 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1418 ccgccgcggagggagccgccgccgc 1442 |||| |||||||||||||||||||| Sbjct: 243 ccgctgcggagggagccgccgccgc 267
>gb|CP000435.1| Synechococcus sp. CC9311, complete genome Length = 2606748 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 724 cggggtgctgaggcagcagaa 744 ||||||||||||||||||||| Sbjct: 2338969 cggggtgctgaggcagcagaa 2338989
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 686 acggggtcaccgtcgtcttga 706 ||||||||||||||||||||| Sbjct: 6683790 acggggtcaccgtcgtcttga 6683810
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1214 tcgaggacctgggcaagggca 1234 ||||||||||||||||||||| Sbjct: 4363972 tcgaggacctgggcaagggca 4363992
>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome Length = 3225748 Score = 42.1 bits (21), Expect = 6.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 649 gggatggggctggagatatgccggcagct 677 ||||| ||||||||||| ||||||||||| Sbjct: 547476 gggatagggctggagatctgccggcagct 547504
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1211 tcctcgaggacctgggcaagg 1231 ||||||||||||||||||||| Sbjct: 3551663 tcctcgaggacctgggcaagg 3551643
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 cgcagctcgcctcgtcctgcg 362 ||||||||||||||||||||| Sbjct: 2946648 cgcagctcgcctcgtcctgcg 2946668
>gb|AY684169.1| Homo sapiens REV3-like, catalytic subunit of DNA polymerase zeta (yeast) (REV3L) gene, complete cds Length = 188355 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1418 ccgccgcggagggagccgccgccgc 1442 |||| |||||||||||||||||||| Sbjct: 2688 ccgctgcggagggagccgccgccgc 2712
>gb|AY658970.1| Synthetic construct Peudomonas aeruginosa clone FLH042492.01F PA3895 gene, partial cds Length = 954 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1214 tcgaggacctgggcaagggca 1234 ||||||||||||||||||||| Sbjct: 743 tcgaggacctgggcaagggca 763
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 cgcagctcgcctcgtcctgcg 362 ||||||||||||||||||||| Sbjct: 74083 cgcagctcgcctcgtcctgcg 74103
>gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome 8, complete sequence Length = 218698 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 ccctagcctcctctgtcgccc 234 ||||||||||||||||||||| Sbjct: 54025 ccctagcctcctctgtcgccc 54045
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1361 actgcgtgcaccccggctacg 1381 ||||||||||||||||||||| Sbjct: 487109 actgcgtgcaccccggctacg 487089
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1419 cgccgcggagggagccgccgccgcg 1443 ||||||||||| ||||||||||||| Sbjct: 22919742 cgccgcggaggaagccgccgccgcg 22919766
>emb|AL136310.15| Human DNA sequence from clone RP3-415N12 on chromosome 6, complete sequence Length = 39889 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1418 ccgccgcggagggagccgccgccgc 1442 |||| |||||||||||||||||||| Sbjct: 25452 ccgctgcggagggagccgccgccgc 25428
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1419 cgccgcggagggagccgccgccgcg 1443 ||||||||||| ||||||||||||| Sbjct: 123299 cgccgcggaggaagccgccgccgcg 123323
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 854 ttgacatattggtaaacaatgcagg 878 ||||||||||||| ||||||||||| Sbjct: 1429824 ttgacatattggttaacaatgcagg 1429848
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 cgcagctcgcctcgtcctgcg 362 ||||||||||||||||||||| Sbjct: 3919685 cgcagctcgcctcgtcctgcg 3919705
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1404 caccggcgtcctcaccgccgc 1424 ||||||||||||||||||||| Sbjct: 2798 caccggcgtcctcaccgccgc 2818
>emb|AL713994.15| Mouse DNA sequence from clone RP23-378H5 on chromosome 11 Contains the 5' end of the Arf-1 gene for ADP-ribosylation factor 1, the Wnt3a gene for wingless-related MMTV integration site 3A, the Wnt9a gene for wingless-type MMTV integration site 9A, two novel genes, the 5' end of a novel gene and five CpG islands, complete sequence Length = 225396 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1057 ctgccgctcctccgctcctcc 1077 ||||||||||||||||||||| Sbjct: 217411 ctgccgctcctccgctcctcc 217431
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1138 gaggagctccggcgggagctg 1158 ||||||||||||||||||||| Sbjct: 118127 gaggagctccggcgggagctg 118107
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1285 tacatggcgtccaaggcgctg 1305 ||||||||||||||||||||| Sbjct: 6352383 tacatggcgtccaaggcgctg 6352363
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 6.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1416 caccgccgcggagggagccgccgccgcgg 1444 |||||||||||||| ||||||||||||| Sbjct: 3958952 caccgccgcggaggtcgccgccgccgcgg 3958980
>gb|BC035823.1| Homo sapiens, Similar to REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae), clone IMAGE:5551831, mRNA, partial cds Length = 2081 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1418 ccgccgcggagggagccgccgccgc 1442 |||| |||||||||||||||||||| Sbjct: 177 ccgctgcggagggagccgccgccgc 201
>dbj|AK109758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-G06, full insert sequence Length = 2620 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1138 gaggagctccggcgggagctg 1158 ||||||||||||||||||||| Sbjct: 113 gaggagctccggcgggagctg 93
>dbj|AK103037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117E11, full insert sequence Length = 2501 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1419 cgccgcggagggagccgccgccgcg 1443 ||||||||||| ||||||||||||| Sbjct: 111 cgccgcggaggaagccgccgccgcg 87
>dbj|AK100120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007K16, full insert sequence Length = 1231 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1138 gaggagctccggcgggagctg 1158 ||||||||||||||||||||| Sbjct: 129 gaggagctccggcgggagctg 109
>dbj|AK064532.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-111-H04, full insert sequence Length = 1310 Score = 42.1 bits (21), Expect = 6.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 850 aagcttgacatattggtaaacaatgcagg 878 ||||||||||| ||||| ||||||||||| Sbjct: 499 aagcttgacatcttggtgaacaatgcagg 527
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 cgcagctcgcctcgtcctgcg 362 ||||||||||||||||||||| Sbjct: 3623198 cgcagctcgcctcgtcctgcg 3623218
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1354 cgggtcaactgcgtgcaccccggct 1378 |||||||||| |||||||||||||| Sbjct: 3976315 cgggtcaactccgtgcaccccggct 3976339
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 cagcccggcgcccggcgcccg 163 ||||||||||||||||||||| Sbjct: 2082545 cagcccggcgcccggcgcccg 2082525
>gb|AF071798.1|AF071798 Homo sapiens DNA polymerase zeta catalytic subunit (REV3) mRNA, complete cds Length = 10716 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1418 ccgccgcggagggagccgccgccgc 1442 |||| |||||||||||||||||||| Sbjct: 243 ccgctgcggagggagccgccgccgc 267
>ref|NM_002912.1| Homo sapiens REV3-like, catalytic subunit of DNA polymerase zeta (yeast) (REV3L), mRNA gb|AF078695.1|AF078695 Homo sapiens DNA polymerase zeta catalytic subunit (REV3L) mRNA, complete cds Length = 10919 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1418 ccgccgcggagggagccgccgccgc 1442 |||| |||||||||||||||||||| Sbjct: 380 ccgctgcggagggagccgccgccgc 404
>emb|AL929275.8| Mouse DNA sequence from clone RP23-65P13 on chromosome 2, complete sequence Length = 197356 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 gctcccctctccctctaatcc 193 ||||||||||||||||||||| Sbjct: 162552 gctcccctctccctctaatcc 162572
>emb|AL732633.6| Mouse DNA sequence from clone RP23-320E20 on chromosome 11, complete sequence Length = 99697 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 725 ggggtgctgaggcagcagaaaggct 749 ||||||||||||||| ||||||||| Sbjct: 48457 ggggtgctgaggcaggagaaaggct 48433 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 250,654,434 Number of extensions: 15224798 Number of successful extensions: 304554 Number of sequences better than 10.0: 67 Number of HSP's gapped: 304553 Number of HSP's successfully gapped: 80 Length of query: 1655 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1632 Effective length of database: 18,503,978,556 Effective search space: 30198493003392 Effective search space used: 30198493003392 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)