ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf71n16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK059476:Os04g0397400 | 52 | 1e-06 | 2 | AK066532:Os04g0661700 | 36 | 0.090 | 3 | AK072122:Os02g0742100 | 34 | 0.26 | 4 | AK100262:Os08g0178300 | 33 | 0.58 | 5 | AK068383:Os08g0178300 | 33 | 0.58 | 6 | AK068906:Os10g0464100 | 32 | 0.99 | 7 | AK119859: | 32 | 1.3 | 8 | AK070061:Os05g0108300 | 32 | 1.7 | 9 | Os09g0244100:Os09g0244100 | 31 | 2.9 | 10 | AK069871:Os11g0307500 | 31 | 2.9 | 11 | AK120853:Os03g0302200 | 30 | 3.8 | 12 | AK110021: | 30 | 4.9 | 13 | AK108555:Os01g0714800 | 30 | 6.4 | 14 | AK072439:Os06g0215200 | 30 | 6.4 | 15 | AK065717:Os06g0215200 | 30 | 6.4 | 16 | AK110578: | 29 | 8.4 | 17 | AY644645:Os08g0192900 | 29 | 8.4 | 18 | AK103422:Os08g0192900 | 29 | 8.4 |
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>AK059476:Os04g0397400 | Length = 38 Score = 52.0 bits (123), Expect = 1e-06 Identities = 28/42 (66%), Positives = 31/42 (73%), Gaps = 1/42 (2%) Frame = +2 Query: 1313 TDQCEMDEDDPKASXXXXXXXLMQTNSKMNSRRYR-SRADDE 1435 T+QCEMDEDDPKA +QTN+KMNSRRYR SR DDE Sbjct: 1 TEQCEMDEDDPKA----LLPPQVQTNTKMNSRRYRSSRTDDE 38
>AK066532:Os04g0661700 | Length = 948 Score = 35.8 bits (81), Expect = 0.090 Identities = 36/164 (21%), Positives = 69/164 (42%), Gaps = 7/164 (4%) Frame = +2 Query: 683 DLSKDPQA----DFGAASGRLKEDNGSVKGGRLSPTQTKERPTAGMQATRAQDIGVKPIL 850 D K+P+A + ++S R +D+ S G + + + ++ R +P Sbjct: 745 DFVKEPKAVRRKESESSSKRYNDDDKSSMYGNIDKKGSFKEEKGSDRSVRHGADTREPRS 804 Query: 851 KRKEEQADSKPRKRVRFNADVKEQPVELLERDEDSPMVPQSMDVVTTKGNS---STRSEA 1021 + +Q D+K ++ + DV+E+ + +R E + TTKG+S S RS + Sbjct: 805 RGNSKQDDAKGERK-DYQKDVREKSRDSADRREKGKHEKEDRSRQTTKGSSSHSSRRSRS 863 Query: 1022 RGVPDYVRNPSKYTCYTLETPESTDESNRRALADLHNLLGRSDP 1153 + S ++ + E +D S RR L + + S P Sbjct: 864 PSARSRTKKESSSHRESVSSDEPSDNSKRRKLHSCKSSMSPSPP 907
>AK072122:Os02g0742100 | Length = 820 Score = 34.3 bits (77), Expect = 0.26 Identities = 51/265 (19%), Positives = 103/265 (38%), Gaps = 28/265 (10%) Frame = +2 Query: 725 GRLKEDNGSVKGGRLSPTQTKERPTAGMQATRAQDIGVKPILKRKEEQADSKPRKRVRFN 904 G+LK + PT E+ + + + + IG + K ++ D+K K Sbjct: 62 GKLKVQSDMGLSRHAGPTNDAEK----IISDKGEKIGAGLVAKEEQHLGDAKDNK---VT 114 Query: 905 ADVKEQPVELLERDEDSPMVPQSMDVVTT-KGNSSTRSEARGVPDYVRNPSKYTCYTLET 1081 + P + + +SP ++ +V TT KG +S + D ++ +K Y T Sbjct: 115 SSGLPSPPGIDVKAVESPAKTENHEVRTTDKGGDGDKSVTKQPVD-IKIDAKLNIYPSTT 173 Query: 1082 PE-------------STDESNRRALADLHNLLGRS-DPNKMQPETPAEIPSSVTFIPRKK 1219 E STD+ NR+ L D + RS D ++ + SS + Sbjct: 174 SELRGGDKQSHGLLKSTDQKNRQCLPDNSEAIDRSGDSAAVKLDVEPSFSSSTVEV---N 230 Query: 1220 SVDAMVV----------DEGPKFSDANPSLISAAAAV---ASDGTDQCEMDEDDPKASXX 1360 D ++V E P + A+ + ++ A V +G E+ ++ ++S Sbjct: 231 KADGLLVGNAVLREDEKKEQPSSTSADATKLAVPAGVPFGPENGISSKELKDNSSESSSH 290 Query: 1361 XXXXXLMQTNSKMNSRRYRSRADDE 1435 + +++ ++RR ++ D+ Sbjct: 291 ARPGTTVSQDTERSARRSSKKSSDD 315
>AK100262:Os08g0178300 | Length = 441 Score = 33.1 bits (74), Expect = 0.58 Identities = 55/239 (23%), Positives = 85/239 (35%), Gaps = 35/239 (14%) Frame = +2 Query: 740 DNGSVKGGRLSPTQTKER-----PTAGMQATRAQDIGVKPILKRKEEQADSKPRKRVRFN 904 D G LSP + + R G + D + P K ++++ S PR+ R + Sbjct: 161 DPRDAAGKDLSPPRQRRRRQDTPSPKGSEVAGGHD-DLSPPRKSRQQRDPSPPRRLSRHD 219 Query: 905 ADVKEQPVELLERDEDSPMVPQSMDVVTTKGNSSTRSEARGVPDYVR------------N 1048 + + R PQ + KG + +P + R Sbjct: 220 SKESQDISPPRRRTRHDSEEPQDLSPPRRKGRHDSEEPKDLLPPWRRVRHDSEEPKDLSP 279 Query: 1049 PSKYTCYTLETPESTDESNRRALADLH-----------NLLGRSD---PNKMQPE-TPAE 1183 P + T + E PE RR D H LG D P K + E P E Sbjct: 280 PRRRTRHDSEEPEDLSPPRRRTRHDSHEPKDKLPPLKRQALGDGDISPPRKGRKEVAPKE 339 Query: 1184 IPSS--VTFIPRKKSVDAMVVDEGPKFSDANPSLI-SAAAAVASDGTDQCEMDEDDPKA 1351 + + +T K+ + + DE KF+ +PS+I A AV D + +ED KA Sbjct: 340 VRKAGLMTAEEVKEDIRKIKEDERLKFAAQDPSVIGKGAKAVFRDKQGKRISEEDMRKA 398
>AK068383:Os08g0178300 | Length = 552 Score = 33.1 bits (74), Expect = 0.58 Identities = 55/239 (23%), Positives = 85/239 (35%), Gaps = 35/239 (14%) Frame = +2 Query: 740 DNGSVKGGRLSPTQTKER-----PTAGMQATRAQDIGVKPILKRKEEQADSKPRKRVRFN 904 D G LSP + + R G + D + P K ++++ S PR+ R + Sbjct: 161 DPRDAAGKDLSPPRQRRRRQDTPSPKGSEVAGGHD-DLSPPRKSRQQRDPSPPRRLSRHD 219 Query: 905 ADVKEQPVELLERDEDSPMVPQSMDVVTTKGNSSTRSEARGVPDYVR------------N 1048 + + R PQ + KG + +P + R Sbjct: 220 SKESQDISPPRRRTRHDSEEPQDLSPPRRKGRHDSEEPKDLLPPWRRVRHDSEEPKDLSP 279 Query: 1049 PSKYTCYTLETPESTDESNRRALADLH-----------NLLGRSD---PNKMQPE-TPAE 1183 P + T + E PE RR D H LG D P K + E P E Sbjct: 280 PRRRTRHDSEEPEDLSPPRRRTRHDSHEPKDKLPPLKRQALGDGDISPPRKGRKEVAPKE 339 Query: 1184 IPSS--VTFIPRKKSVDAMVVDEGPKFSDANPSLI-SAAAAVASDGTDQCEMDEDDPKA 1351 + + +T K+ + + DE KF+ +PS+I A AV D + +ED KA Sbjct: 340 VRKAGLMTAEEVKEDIRKIKEDERLKFAAQDPSVIGKGAKAVFRDKQGKRISEEDMRKA 398
>AK068906:Os10g0464100 | Length = 646 Score = 32.3 bits (72), Expect = 0.99 Identities = 21/68 (30%), Positives = 29/68 (42%) Frame = +2 Query: 1139 GRSDPNKMQPETPAEIPSSVTFIPRKKSVDAMVVDEGPKFSDANPSLISAAAAVASDGTD 1318 G D M+ P + T S A + + P+ A PS SAAAA A+ D Sbjct: 5 GEMDEEAMRAFFPMSFGKAPTRAGAAASAHASTLRKPPQNPSAKPSTSSAAAAAAAGDDD 64 Query: 1319 QCEMDEDD 1342 + D+DD Sbjct: 65 DDDDDDDD 72
>AK119859: | Length = 727 Score = 32.0 bits (71), Expect = 1.3 Identities = 38/171 (22%), Positives = 62/171 (36%), Gaps = 4/171 (2%) Frame = +2 Query: 722 SGRLKEDNGSVKGGRLSPTQTKERPTAGMQATRAQDIGVKPILKRKEEQADSKPRKRVRF 901 S RL + N + + LSP++ E P D+ PR+R Sbjct: 395 SSRLSKLNSTSQSPALSPSKEPETPRENQDTV----------------MEDAPPRERTPD 438 Query: 902 NADVKEQPVELLERDEDSPMVPQSMDVVTTKGNSSTRSEARGVPDY----VRNPSKYTCY 1069 A R + P +P D ++G S + S A+ D R+PS+ + Y Sbjct: 439 TAG--------RSRWDAVPPLPSKGD--KSRGRSRSASIAQSTRDRKRSRTRSPSRGSRY 488 Query: 1070 TLETPESTDESNRRALADLHNLLGRSDPNKMQPETPAEIPSSVTFIPRKKS 1222 + D+ R D H+ R D + + + S T+ R+KS Sbjct: 489 DRRSSRYEDDRRSRREEDRHSYRPRDDRDDKRSRRASRSRSRETYTSRRKS 539
>AK070061:Os05g0108300 | Length = 621 Score = 31.6 bits (70), Expect = 1.7 Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 1/93 (1%) Frame = +2 Query: 1160 MQPETPAEIPSSVTFIPRKKSVDAMVVDEGPKFSDANPSLISAAAAVASDGTDQCEMDED 1339 ++P +P+ + +K D V + G NPS+I + VAS T D++ Sbjct: 501 VEPHIGGNMPNGIL---KKNDTDDTVSNLGTSVDLPNPSMIDRKSGVASVSTSPQSFDDE 557 Query: 1340 DPKASXXXXXXXLM-QTNSKMNSRRYRSRADDE 1435 +A L+ Q ++N R + +AD E Sbjct: 558 HIEADVSERLVNLLAQQQEELNVLRRKHKADIE 590
>Os09g0244100:Os09g0244100 | Length = 1340 Score = 30.8 bits (68), Expect = 2.9 Identities = 14/46 (30%), Positives = 27/46 (58%) Frame = +2 Query: 527 REEEEDKYDRAAFGREDAADRVYMSEIMDDGMNMSINTVVPDLLDD 664 R ++ + AAFG+ED+ + + + I DD ++ N+V P + +D Sbjct: 342 RSDDMEGLLNAAFGKEDSYESLSSASINDDDIHFDSNSVEPGMDED 387
>AK069871:Os11g0307500 | Length = 213 Score = 30.8 bits (68), Expect = 2.9 Identities = 19/69 (27%), Positives = 28/69 (40%) Frame = +2 Query: 740 DNGSVKGGRLSPTQTKERPTAGMQATRAQDIGVKPILKRKEEQADSKPRKRVRFNADVKE 919 D G GGRL PT T +G +A A D+G + P +N + Sbjct: 35 DEGEFAGGRLIPTTTSLLVPSGSRAAIAVDLGGSEQRMAAWQSGSCSPSAARPYNPRCRP 94 Query: 920 QPVELLERD 946 +E+L+ D Sbjct: 95 CAIEMLDLD 103
>AK120853:Os03g0302200 | Length = 799 Score = 30.4 bits (67), Expect = 3.8 Identities = 58/251 (23%), Positives = 93/251 (37%), Gaps = 13/251 (5%) Frame = +2 Query: 512 DPTLDREEEEDKYDRAAFGREDAADRVYMSEIMDDGMNMSINTVVPDLLDDTIDEICDLS 691 DP +D EEEE+ D + E+ D+ D D+ DE+ + + Sbjct: 179 DPDMDEEEEEEDVD-------------FDPEVEDEEEE--------DFEDEEDDEL-EAT 216 Query: 692 KDPQADFGAASGRLKEDNGSVKGGRLSPTQTKERPTAGMQATRAQDI----GVKPILKRK 859 K + G L + G +K S ++ R ++A A I + +L R Sbjct: 217 KVRVKNMGRRKSTLNQRRGKMK----SSSKVASRKVGSVKARNAASIRRRQKKRSMLDRY 272 Query: 860 EE---------QADSKPRKRVRFNADVKEQPVELLERDEDSPMVPQSMDVVTTKGNSSTR 1012 E+ AD +PRK+ R ++ P + E P ++D TT T Sbjct: 273 EDDDFIVEDEVMADWQPRKKARIRKQMEVDPPTPVFEAEIWP----TIDSDTTDFEFVTS 328 Query: 1013 SEARGVPDYVRNPSKYTCYTLETPESTDESNRRALADLHNLLGRSDPNKMQPETPAEIPS 1192 E + + R K + +S+ +S L S+P PE+ +PS Sbjct: 329 DEEAAIAEPTRVIKKGRKKRVFVSDSSSDSEFVVSDKELGNLKESEP----PESLKVLPS 384 Query: 1193 SVTFIPRKKSV 1225 S PRK SV Sbjct: 385 S----PRKISV 391
>AK110021: | Length = 722 Score = 30.0 bits (66), Expect = 4.9 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 6/107 (5%) Frame = +2 Query: 1001 SSTRSEARGVPDYVRNPSKYTCYTLETPESTDESNRRALADLHNLLGRSDPNKMQPETPA 1180 +ST + + P + + + T Y P S DE+ + H L + P+K QP P+ Sbjct: 3 ASTDNSSAAGPSRLSSSPRATFYP-SWPHSHDEAEYFEVPPDHFLAQQRGPHKAQPSDPS 61 Query: 1181 EIP------SSVTFIPRKKSVDAMVVDEGPKFSDANPSLISAAAAVA 1303 E P +S + R S+DA P + A+ +L++ + +A Sbjct: 62 EHPLVRHLSASSSSTTRSASIDAAPTTTMPALA-AHAALLAPSQPLA 107
>AK108555:Os01g0714800 | Length = 245 Score = 29.6 bits (65), Expect = 6.4 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = +2 Query: 1145 SDPNKMQPETPAEIPSS--VTFIPRKKSVDAMVVDEGPKFSDANPSLISAAAAVASDGTD 1318 SD + PA +PS+ VT P + +V D S+ +AAAAVA +G D Sbjct: 82 SDDQGVPAPPPAAVPSASYVTPAPAMAPAEPVVPDAVAAAGGYPRSVAAAAAAVAGEGRD 141 Query: 1319 QCEMDE 1336 + D+ Sbjct: 142 RTTTDK 147
>AK072439:Os06g0215200 | Length = 243 Score = 29.6 bits (65), Expect = 6.4 Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 16/109 (14%) Frame = +2 Query: 665 TIDEICDLSKDPQADFGAASGRLKEDNGSV------KGGR---------LSPTQT-KERP 796 T +E +K QA+ G +S + SV KGG+ L+P +T K P Sbjct: 134 TQEEAYAWAKTSQANAGQSSSSQTKPTASVATVPTIKGGQAPGLVVKKPLNPMRTVKGAP 193 Query: 797 TAGMQATRAQDIGVKPILKRKEEQADSKPRKRVRFNADVKEQPVELLER 943 +A R ++ G KP + KEE+A K R+ R + +E+P+ L R Sbjct: 194 SAIAVNKRKREDG-KPKVISKEEEAALKAREAARKRMEDREKPLMGLYR 241
>AK065717:Os06g0215200 | Length = 243 Score = 29.6 bits (65), Expect = 6.4 Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 16/109 (14%) Frame = +2 Query: 665 TIDEICDLSKDPQADFGAASGRLKEDNGSV------KGGR---------LSPTQT-KERP 796 T +E +K QA+ G +S + SV KGG+ L+P +T K P Sbjct: 134 TQEEAYAWAKTSQANAGQSSSSQTKPTASVATVPTIKGGQAPGLVVKKPLNPMRTVKGAP 193 Query: 797 TAGMQATRAQDIGVKPILKRKEEQADSKPRKRVRFNADVKEQPVELLER 943 +A R ++ G KP + KEE+A K R+ R + +E+P+ L R Sbjct: 194 SAIAVNKRKREDG-KPKVISKEEEAALKAREAARKRMEDREKPLMGLYR 241
>AK110578: | Length = 393 Score = 29.3 bits (64), Expect = 8.4 Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 3/86 (3%) Frame = +2 Query: 704 ADFGAASGRLKEDNGSVKG---GRLSPTQTKERPTAGMQATRAQDIGVKPILKRKEEQAD 874 AD+G G + D G G G Q +ER + + + P +RKE A Sbjct: 85 ADYGGYRGEVYGDGGGFGGNQSGFADTQQRRERFDEYDEYDEGESVSPTP-ARRKEPAAS 143 Query: 875 SKPRKRVRFNADVKEQPVELLERDED 952 K K+ A E V+LL D++ Sbjct: 144 RKEPKKEEPKAKAPEPVVDLLAWDDE 169
>AY644645:Os08g0192900 | Length = 572 Score = 29.3 bits (64), Expect = 8.4 Identities = 48/237 (20%), Positives = 85/237 (35%), Gaps = 26/237 (10%) Frame = +2 Query: 803 GMQATRAQDIGVKPILKRKEEQADSKPRKRVRF-NADVKEQPVELLERDEDSPMVPQSMD 979 G + A+D K + +K++ A + P K V AD K+ + P Sbjct: 24 GGKKREAEDEIEKAVSAKKQKAAAAPPAKAVPAPKADAKKAKKQ-----------PPPKK 72 Query: 980 VVTTKGNSSTRSEARGVPDYVRNPSKYTCYTLETPESTDESNRRALAD---------LHN 1132 ++ SS+ ++ + V+ K T ++ S+DES+ + D +N Sbjct: 73 AASSSSGSSSEEDSSESEEEVKVQVKKTTKPVKQESSSDESSDESSDDEDAKPADPVANN 132 Query: 1133 LLGRSDPNKMQPETPAEIP-------------SSVTFIPRKKSVDAMVVDEGPKFSDANP 1273 L + P E+ ++ +SVT +K D+ + SD + Sbjct: 133 GLKKGKPASSDSESDSDDEMDEDEKPAAPVKKTSVTAQKKKDDSDSSESESDESDSDEDV 192 Query: 1274 SLISAAAAVAS---DGTDQCEMDEDDPKASXXXXXXXLMQTNSKMNSRRYRSRADDE 1435 S A AVA+ D TD E + D +++S +DDE Sbjct: 193 PTKSKAPAVAAKNDDSTDGSESESDSEDEDAAPKGAAKKESSSDEEDDSSEESSDDE 249
>AK103422:Os08g0192900 | Length = 572 Score = 29.3 bits (64), Expect = 8.4 Identities = 48/237 (20%), Positives = 85/237 (35%), Gaps = 26/237 (10%) Frame = +2 Query: 803 GMQATRAQDIGVKPILKRKEEQADSKPRKRVRF-NADVKEQPVELLERDEDSPMVPQSMD 979 G + A+D K + +K++ A + P K V AD K+ + P Sbjct: 24 GGKKREAEDEIEKAVSAKKQKAAAAPPAKAVPAPKADAKKAKKQ-----------PPPKK 72 Query: 980 VVTTKGNSSTRSEARGVPDYVRNPSKYTCYTLETPESTDESNRRALAD---------LHN 1132 ++ SS+ ++ + V+ K T ++ S+DES+ + D +N Sbjct: 73 AASSSSGSSSEEDSSESEEEVKVQVKKTTKPVKQESSSDESSDESSDDEDAKPADPVANN 132 Query: 1133 LLGRSDPNKMQPETPAEIP-------------SSVTFIPRKKSVDAMVVDEGPKFSDANP 1273 L + P E+ ++ +SVT +K D+ + SD + Sbjct: 133 GLKKGKPASSDSESDSDDEMDEDEKPAAPVKKTSVTAQKKKDDSDSSESESDESDSDEDV 192 Query: 1274 SLISAAAAVAS---DGTDQCEMDEDDPKASXXXXXXXLMQTNSKMNSRRYRSRADDE 1435 S A AVA+ D TD E + D +++S +DDE Sbjct: 193 PTKSKAPAVAAKNDDSTDGSESESDSEDEDAAPKGAAKKESSSDEEDDSSEESSDDE 249 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 39,069,667 Number of extensions: 820170 Number of successful extensions: 2559 Number of sequences better than 10.0: 18 Number of HSP's gapped: 2556 Number of HSP's successfully gapped: 18 Length of query: 544 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 438 Effective length of database: 11,155,509 Effective search space: 4886112942 Effective search space used: 4886112942 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
