| Clone Name | FLbaf71n16 |
|---|---|
| Clone Library Name | barley_pub |
>Q9P1Y6:K1542_HUMAN RING and PHD-finger domain-containing protein KIAA1542 - Homo| sapiens (Human) Length = 1649 Score = 39.7 bits (91), Expect = 0.037 Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 1/102 (0%) Frame = +2 Query: 503 IGLDPTLDREEEEDKYDRAAFGREDAADRVYMSEIMDDGMNMSINTVVPDLLDDTIDE-I 679 I ++ T EEEED GR D DR+ + + D G +M + P L + +DE Sbjct: 169 IPVENTKASEEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHM--ECLDPPLQEVPVDEWF 226 Query: 680 CDLSKDPQADFGAASGRLKEDNGSVKGGRLSPTQTKERPTAG 805 C P A +G + E+ S+ + PT ++ RP AG Sbjct: 227 CPECAAPGVVLAADAGPVSEEEVSLLLADVVPTTSRLRPRAG 268
>Q01484:ANK2_HUMAN Ankyrin-2 - Homo sapiens (Human)| Length = 3924 Score = 37.4 bits (85), Expect = 0.18 Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 3/149 (2%) Frame = +2 Query: 764 RLSPTQTKERPTAGMQATRAQDIGVKPILKRKEEQADSKPRKRVRFNADVKEQPVELLER 943 R PT T P+A +++ ++D + K ++A K + V+ EQ + L+ Sbjct: 3274 RTMPTSTPAPPSAEYESSVSEDFLSSVDEENKADEAKPKSKLPVKVPLQRVEQQLSDLDT 3333 Query: 944 DEDSPMVPQSMDV--VTTKGNSSTRSEARGVPDYVRNPSKYTCYTLETPESTDESNRRA- 1114 + PQ D+ + S + S+A + + P K YT E+ ES RA Sbjct: 3334 SVQKTVAPQGQDMASIAPDNRSKSESDASSLDSKTKCPVKTRSYT----ETETESRERAE 3389 Query: 1115 LADLHNLLGRSDPNKMQPETPAEIPSSVT 1201 +L + G + P + P + S+ + Sbjct: 3390 ELELESEEGATRPKILTSRLPVKSRSTTS 3418
>Q13105:ZBT17_HUMAN Zinc finger and BTB domain-containing protein 17 - Homo sapiens| (Human) Length = 803 Score = 35.0 bits (79), Expect = 0.91 Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 10/96 (10%) Frame = +2 Query: 773 PTQTKERPTAGMQATRA---------QDIGVKPILKRKEEQADSKPRKRVRFN-ADVKEQ 922 P + K PT+GM A A Q++ V+P K +EEQ + + ++ A+VKE+ Sbjct: 194 PVELKPDPTSGMAAAEAEAALSESSEQEMEVEPARKGEEEQKEQEEQEEEGAGPAEVKEE 253 Query: 923 PVELLERDEDSPMVPQSMDVVTTKGNSSTRSEARGV 1030 +L + ++P ++ + T SEARG+ Sbjct: 254 GSQL--ENGEAPEENENEESAGTDSGQELGSEARGL 287
>P16884:NFH_RAT Neurofilament heavy polypeptide - Rattus norvegicus (Rat)| Length = 1072 Score = 35.0 bits (79), Expect = 0.91 Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 12/152 (7%) Frame = +2 Query: 761 GRLSPTQTKERPTAGMQATRAQDIGVKPILKRKEEQADSKPRKRVRFNADVKEQPVELLE 940 G + KE+ A + +GVK K KE+ D+K ++ + KE+P Sbjct: 939 GEAKKEEAKEKKAAAPEEETPAKLGVKEEAKPKEKAEDAKAKEPSK--PSEKEKP----- 991 Query: 941 RDEDSPMVPQSMDVVTTKGNSS------------TRSEARGVPDYVRNPSKYTCYTLETP 1084 + E+ P P+ D K S + E +G+P + PSK E Sbjct: 992 KKEEVPAAPEKKDTKEEKTTESKKPEEKPKMEAKAKEEDKGLP---QEPSKPKTEKAEKS 1048 Query: 1085 ESTDESNRRALADLHNLLGRSDPNKMQPETPA 1180 STD+ + S P++ PE A Sbjct: 1049 SSTDQKD-------------SQPSEKAPEDKA 1067
>O35902:DSG3_MOUSE Desmoglein-3 precursor - Mus musculus (Mouse)| Length = 993 Score = 34.7 bits (78), Expect = 1.2 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 24/157 (15%) Frame = +2 Query: 884 RKRVRFNADVKEQPVELLERDEDSPMVPQSMDV---VTTKGNSSTRSEARGVPDYVRNPS 1054 R + F+ V Q R + +P+ Q +DV ++ + S T + RGV + + Sbjct: 350 RNKAEFHQSVISQ-----YRVQSTPVTIQVIDVREGISFRPPSKTFTVQRGV-----STN 399 Query: 1055 KYTCYTLETPESTDESNRRALADLHNLLGRSDPNKM-------QPETPAEIPSSVTFIPR 1213 K Y L T ++TDE +A + + +LGR+D + Q + I TFI Sbjct: 400 KLVGYILGTYQATDEDTGKAASSVRYVLGRNDGGLLVIDSKTAQIKFVKNIDRDSTFIVN 459 Query: 1214 KK-SVDAMVVDEG-------------PKFSDANPSLI 1282 K S + + +DE P F++ PS++ Sbjct: 460 KTISAEVLAIDENTGKTSTGTIYVEVPSFNENCPSVV 496
>Q06147:LCB5_YEAST Sphingoid long chain base kinase 5 - Saccharomyces cerevisiae| (Baker's yeast) Length = 687 Score = 34.3 bits (77), Expect = 1.6 Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 1/96 (1%) Frame = +2 Query: 1052 SKYTCYTLETPESTDESNRRALADLHNLLGRSDPNKMQPETPAEIPSSVTFIPRKKSVDA 1231 S +C T + T + + + D ++P P ++P++ T IP + +DA Sbjct: 87 SLISCVTCLSDTDTIDRSETSTTDTSKDDLSANPKLHYPSVNGQLPAN-TVIPYGRILDA 145 Query: 1232 MVVDEGP-KFSDANPSLISAAAAVASDGTDQCEMDE 1336 +++ P + DAN S S ++ S+ +++C++DE Sbjct: 146 RYIEKEPLHYYDANSSPSSPLSSSMSNISEKCDLDE 181
>P54786:ZDS2_YEAST Protein ZDS2 - Saccharomyces cerevisiae (Baker's yeast)| Length = 942 Score = 33.9 bits (76), Expect = 2.0 Identities = 56/236 (23%), Positives = 94/236 (39%), Gaps = 6/236 (2%) Frame = +2 Query: 653 LLDDTIDEICDLSKDPQADFGAASGRLKEDNGSVKGGRLSPTQTKERPTAGMQATRAQDI 832 L DD DE C + +ADF S + + R++ ++ + P + + A+ + Sbjct: 554 LTDDEDDEEC--VDNEKADFVNLSVSRRAKSTKRASERINHSKNRHSPIFQIHSEEAKSV 611 Query: 833 GVKPILKRKEEQADSKPRKRVRFNADVKEQPVELLERDEDSPMVPQSMDVVTTKGNSSTR 1012 + P + E SKP V E+ VEL P T K NS Sbjct: 612 VITPSVVSSSESQPSKPTAPA-----VVEKKVEL----------PTDTQASTHKKNSL-- 654 Query: 1013 SEARGVPDYVRNPSKYTCYT-LETPESTDESNRRALADLHNLLG--RSDPNKMQPETPAE 1183 E R + R TC + ++ + + + + A H+ L R P K E E Sbjct: 655 -EKRLAKLFKRKQHNGTCKSDVKVIKKSVKKELKKKAS-HSSLSKFRKSPKKKPQEAEVE 712 Query: 1184 IPSSVTFIPRKKSVD-AMVVDEGPKFSDANPSLISAAAAVASDGTDQ--CEMDEDD 1342 PSS T + +D A V++ + S+A+ L + + +S+ + E+D DD Sbjct: 713 RPSSPTKTITTEDIDTASVIEPEVRSSNASTLLPDSHTSHSSEFVVETISELDGDD 768
>Q5XIB1:TSSC4_RAT Protein TSSC4 - Rattus norvegicus (Rat)| Length = 317 Score = 33.5 bits (75), Expect = 2.7 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = +2 Query: 1028 VPDYVRNPSKYTCYTLE-TPESTDESNRRALADLHNLLGRSDPNKMQP 1168 VPDYV +P ++T Y+LE E++++SNR A + ++ P P Sbjct: 149 VPDYVSHPERWTKYSLEDVSETSEQSNRDAALAFLSSRSQASPTDYVP 196
>Q87D18:NADA_XYLFT Quinolinate synthetase A - Xylella fastidiosa (strain Temecula1 /| ATCC 700964) Length = 339 Score = 33.5 bits (75), Expect = 2.7 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 11/112 (9%) Frame = +2 Query: 953 SPMVPQSMDVVTTKGNSSTRSEARGVPDYVRNPSKYTCYTLETPESTDESNRRALADLHN 1132 S V + D+ T GN+ EA GVP + P +Y + + ++H Sbjct: 156 SAAVKAASDICCTSGNAKKVVEALGVPKVLMIPDEYLARNVAKETEVQIISWHGHCEVHE 215 Query: 1133 LLGRSDPNKMQ-----------PETPAEIPSSVTFIPRKKSVDAMVVDEGPK 1255 L SD +++ PE P ++ ++ F ++ V + PK Sbjct: 216 LFSASDILQLRENHPGVTVLAHPECPPDVVAAADFAGSTAAMSDYVTTKQPK 267
>Q9PC58:NADA_XYLFA Quinolinate synthetase A - Xylella fastidiosa| Length = 339 Score = 33.5 bits (75), Expect = 2.7 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 11/112 (9%) Frame = +2 Query: 953 SPMVPQSMDVVTTKGNSSTRSEARGVPDYVRNPSKYTCYTLETPESTDESNRRALADLHN 1132 S V + D+ T GN+ EA GVP + P +Y + + ++H Sbjct: 156 SAAVKAASDICCTSGNAKKVVEALGVPKVLMIPDEYLARNVAKETEVQIISWHGHCEVHE 215 Query: 1133 LLGRSDPNKMQ-----------PETPAEIPSSVTFIPRKKSVDAMVVDEGPK 1255 L SD +++ PE P ++ ++ F ++ V + PK Sbjct: 216 LFSASDILQLRENHPGVTVLAHPECPPDVVAAADFAGSTAAMSDYVTTKQPK 267
>Q4I5R3:SET1_GIBZE Histone-lysine N-methyltransferase, H3 lysine-4 specific - Gibberella| zeae (Fusarium graminearum) Length = 1252 Score = 33.1 bits (74), Expect = 3.5 Identities = 19/62 (30%), Positives = 31/62 (50%) Frame = +2 Query: 827 DIGVKPILKRKEEQADSKPRKRVRFNADVKEQPVELLERDEDSPMVPQSMDVVTTKGNSS 1006 D + +L R+ E+ADS+PR R+ + + + E+ ED M S + T +S Sbjct: 741 DTDTRALLARETEEADSRPRSRMSTDDEASKDDFVPWEQGEDDSMTEASFAIADT---AS 797 Query: 1007 TR 1012 TR Sbjct: 798 TR 799
>P49797:RGS3_RAT Regulator of G-protein signaling 3 - Rattus norvegicus (Rat)| Length = 967 Score = 33.1 bits (74), Expect = 3.5 Identities = 37/166 (22%), Positives = 63/166 (37%), Gaps = 3/166 (1%) Frame = +2 Query: 857 KEEQADSKPRKRVRFNADVKEQPVELLERDEDSPMVPQSMDVVTTKGNSSTRSEARGV-- 1030 K++Q + P +R F + E+ + L+E P + + +K S ++ G Sbjct: 386 KQQQLAATPTERKMFETEADEKEMPLVEGKG-----PGAEERTPSKDPSPSQELPPGQEL 440 Query: 1031 -PDYVRNPSKYTCYTLETPESTDESNRRALADLHNLLGRSDPNKMQPETPAEIPSSVTFI 1207 P +PS+ E P S D S + L G+ P+ P E+P+ Sbjct: 441 PPSKDPSPSQELPPGQELPPSKDPSPSQELPP-----GQELPSSKNPSPSQELPAGQDLP 495 Query: 1208 PRKKSVDAMVVDEGPKFSDANPSLISAAAAVASDGTDQCEMDEDDP 1345 PRK+S GP+ +PS A + + +D P Sbjct: 496 PRKESFSGQEAAPGPE----SPSSEDIATCQNPPQSPETSTSKDSP 537
>Q9JHE7:TSSC4_MOUSE Protein TSSC4 - Mus musculus (Mouse)| Length = 317 Score = 32.7 bits (73), Expect = 4.5 Identities = 15/30 (50%), Positives = 23/30 (76%), Gaps = 1/30 (3%) Frame = +2 Query: 1028 VPDYVRNPSKYTCYTLE-TPESTDESNRRA 1114 VPDYV +P ++T Y+LE E++++SNR A Sbjct: 149 VPDYVSHPERWTKYSLEDVSEASEQSNRDA 178
>O14647:CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 - Homo sapiens (Human)| Length = 1828 Score = 32.7 bits (73), Expect = 4.5 Identities = 33/170 (19%), Positives = 62/170 (36%) Frame = +2 Query: 839 KPILKRKEEQADSKPRKRVRFNADVKEQPVELLERDEDSPMVPQSMDVVTTKGNSSTRSE 1018 + IL+ +++S P + A +K +L + E PQ MD+ + TR Sbjct: 948 RTILENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETREN 1007 Query: 1019 ARGVPDYVRNPSKYTCYTLETPESTDESNRRALADLHNLLGRSDPNKMQPETPAEIPSSV 1198 S++ T E +E R D ++ K++ E + + Sbjct: 1008 EVSTSATDELLSQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELEEI 1067 Query: 1199 TFIPRKKSVDAMVVDEGPKFSDANPSLISAAAAVASDGTDQCEMDEDDPK 1348 +PR +S + + +D++ S A S ++ D DD K Sbjct: 1068 YMLPRIRS-----STKKAQTNDSDSDTESKRQAQRSSASESETEDSDDDK 1112
>P22856:VL96_IRV1 L96 protein - Tipula iridescent virus (TIV) (Insect iridescent virus| type 1) Length = 867 Score = 32.3 bits (72), Expect = 5.9 Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 6/148 (4%) Frame = +2 Query: 875 SKPRKRVRFNADVKEQPVELLERDE-DSPMVPQSMDVVTTKGNSSTRSEARGV-----PD 1036 SKPR ++ K + +L+ DE D +V + +T K S RS V P Sbjct: 393 SKPR-----SSSPKYKTKDLVTTDESDGEIVVKK---ITRKPKSPRRSPPASVRRSRTPS 444 Query: 1037 YVRNPSKYTCYTLETPESTDESNRRALADLHNLLGRSDPNKMQPETPAEIPSSVTFIPRK 1216 ++PS P S S R + D G + P+ ++P++P+ P S + PR Sbjct: 445 VPKSPSA-------RPRSKSPSVRAEITDDE---GETPPSSVRPKSPSVRPKSPSVRPRS 494 Query: 1217 KSVDAMVVDEGPKFSDANPSLISAAAAV 1300 KS + +PS+ S + +V Sbjct: 495 KSPSVRPKSPSARPRSKSPSVRSKSPSV 522
>Q07283:TRHY_HUMAN Trichohyalin - Homo sapiens (Human)| Length = 1898 Score = 32.3 bits (72), Expect = 5.9 Identities = 16/56 (28%), Positives = 34/56 (60%) Frame = +2 Query: 785 KERPTAGMQATRAQDIGVKPILKRKEEQADSKPRKRVRFNADVKEQPVELLERDED 952 ++R + Q R Q+ ++ +LKR+EE+ + R+ R + +E+ +LL+R+E+ Sbjct: 548 QQRLRSEQQLRREQEERLEQLLKREEEKRLEQERREQRLKREQEERRDQLLKREEE 603
>Q62313:TGON1_MOUSE Trans-Golgi network integral membrane protein 1 precursor - Mus| musculus (Mouse) Length = 353 Score = 32.3 bits (72), Expect = 5.9 Identities = 27/124 (21%), Positives = 54/124 (43%), Gaps = 2/124 (1%) Frame = +2 Query: 683 DLSKDPQADFGAASGRLKEDNGSVKGGRLSPTQTKERPTAGMQATRAQDIGVKPILKRKE 862 D K + D + ++ D + K ++ PT+ ++PT + + + K Sbjct: 165 DSGKSTKVDLDKPTSKISPDTETSKTDKVQPTEKGQKPTLTSKTESGETLAGDSDFSLKP 224 Query: 863 EQAD--SKPRKRVRFNADVKEQPVELLERDEDSPMVPQSMDVVTTKGNSSTRSEARGVPD 1036 E+ D S+P + V + KE E +E SP+ ++ V G SS+ ++ + D Sbjct: 225 EKGDKSSEPTEDV----ETKEIEEGDTEPEEGSPLEEENEKV---PGPSSSENQEGTLTD 277 Query: 1037 YVRN 1048 ++N Sbjct: 278 SMKN 281
>Q5BET6:ROK1_EMENI ATP-dependent RNA helicase rok1 - Emericella nidulans (Aspergillus| nidulans) Length = 742 Score = 32.3 bits (72), Expect = 5.9 Identities = 39/151 (25%), Positives = 58/151 (38%), Gaps = 3/151 (1%) Frame = +2 Query: 776 TQTKERPTAGMQATRAQDIGVKPILKRKEEQADSKPRKRVRFNAD---VKEQPVELLERD 946 TQ+ P+ G A G K E+ K RKR D V E + L Sbjct: 18 TQSSTLPSTGKAANPQLFRGAAA---EKLEKGSGKKRKRAHAADDEAVVNEDALNLDFFS 74 Query: 947 EDSPMVPQSMDVVTTKGNSSTRSEARGVPDYVRNPSKYTCYTLETPESTDESNRRALADL 1126 + +P+S D TTKG+ G P S+ + P DE RR + + Sbjct: 75 QGRSSIPKSSDAATTKGS--------GAPAGQEGASESDSDADDEP--MDEVQRRTILNA 124 Query: 1127 HNLLGRSDPNKMQPETPAEIPSSVTFIPRKK 1219 H + +D ++ PA++ S P+KK Sbjct: 125 HK-IKVTDMRDLEELAPAQVQSEE---PKKK 151
>P34458:YMD4_CAEEL Uncharacterized protein F54H12.4 - Caenorhabditis elegans| Length = 343 Score = 32.0 bits (71), Expect = 7.7 Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 11/172 (6%) Frame = +2 Query: 512 DPTLDREEEEDKYDRAAFGREDAADR------VYMSEIMDDGMNMSINTVVPDL-LDDTI 670 +P + + E E +D + R D + VY+ E +D +P++ ++ + Sbjct: 108 NPPVYKAENEQLFDDVPY-RNDGINHLKPRKNVYIKEEPEDEDYHMEYEKIPEINMEQNV 166 Query: 671 DEICDLSKDPQADFGAASGRLKEDNGSVKGGRLSPTQTKERPTAGMQATRAQDIGVKPIL 850 +E L +PQ A+G++K+ K G LS K+ + AT + K L Sbjct: 167 NE---LFTEPQKH---AAGKIKKSKNQKKDGTLSRPLGKKENKSVQDATSNKR--QKFDL 218 Query: 851 KRKEEQADSKPRKRVRFNADVKEQPVELLERDED-SPMV---PQSMDVVTTK 994 KR + + KPRK + D E DED PMV PQ+ ++ K Sbjct: 219 KRGKSMNNVKPRKLYKMQLD---------EEDEDEEPMVDETPQNTEISIKK 261
>O01761:UNC89_CAEEL Muscle M-line assembly protein unc-89 - Caenorhabditis elegans| Length = 8081 Score = 32.0 bits (71), Expect = 7.7 Identities = 44/212 (20%), Positives = 85/212 (40%), Gaps = 7/212 (3%) Frame = +2 Query: 659 DDTIDEICDLSKDPQADFGAASGRLKEDNGSVKGGRLSPTQTKERPTAGMQATRAQDIGV 838 + T +++ + K P + + E+ S SP + +E+P + + ++ + Sbjct: 1529 EKTPEKVDEKPKSPTKKDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKSPEKPA 1588 Query: 839 KPILKRKEEQADSKPRKRVRFNADVKEQPVELLERDEDSPMVPQSMDVVTTKGNSSTRSE 1018 P K+ E + S +K V E EL E S P+ D +S Sbjct: 1589 SP-TKKSENEVKSPTKKEKSPEKSVVE---ELKSPKEKS---PEKADDKPKSPTKKEKSP 1641 Query: 1019 ARGVPDYVRNPSKYTCYTLETPESTDESNRRALADLHNLLGRSD-----PNKMQ--PETP 1177 + + V++P+K ++PE +E + ++D P K + P+T Sbjct: 1642 EKSATEDVKSPTKKE----KSPEKVEEKPTSPTKKESSPTKKTDDEVKSPTKKEKSPQTV 1697 Query: 1178 AEIPSSVTFIPRKKSVDAMVVDEGPKFSDANP 1273 E P+S T ++KS + VV+E + +P Sbjct: 1698 EEKPASPT--KKEKSPEKSVVEEVKSPKEKSP 1727
>Q4V842:GPTC4_XENLA G patch domain-containing protein 4 - Xenopus laevis (African clawed| frog) Length = 324 Score = 32.0 bits (71), Expect = 7.7 Identities = 28/140 (20%), Positives = 64/140 (45%), Gaps = 1/140 (0%) Frame = +2 Query: 692 KDPQADFGAASGRLKEDNGSVKGGRLSPTQTKERPTAGMQATRAQDIGVKPILKRKEEQA 871 ++ + +F A G+ KE + +L TQ P +Q +++ G++ + + Q Sbjct: 189 EEQEREFLAKYGK-KEQKNKERDEKLERTQGL--PGMNIQQIYSEE-GIETNISHESSQH 244 Query: 872 DSKPRKRVRFNADVKEQPVELLERDEDSPMVPQSMDVVTTKGNSSTRSEARGVPD-YVRN 1048 K +KR R +++ KE+ E E+ M P +V ++K S + + P Sbjct: 245 KKKKKKRKRADSERKEESQE--NGHEEEQMPPSEQEVKSSKKKKSKKKQREESPSTQEEQ 302 Query: 1049 PSKYTCYTLETPESTDESNR 1108 P++ + ++++ + + N+ Sbjct: 303 PTESSDFSMKPKKKKKKKNK 322
>Q9SR66:DML2_ARATH DEMETER-like protein 2 - Arabidopsis thaliana (Mouse-ear cress)| Length = 1309 Score = 32.0 bits (71), Expect = 7.7 Identities = 24/112 (21%), Positives = 43/112 (38%) Frame = +2 Query: 575 DAADRVYMSEIMDDGMNMSINTVVPDLLDDTIDEICDLSKDPQADFGAASGRLKEDNGSV 754 D + + M +++N V P++ E+C +DP++ + V Sbjct: 708 DLSQGISMVSSASTHCELNLNEVPPEV------ELCSHQQDPESTIQTQDQQESTRTEDV 761 Query: 755 KGGRLSPTQTKERPTAGMQATRAQDIGVKPILKRKEEQADSKPRKRVRFNAD 910 K R PT +K + + A Q V RKE ++ + R+R D Sbjct: 762 KKNRKKPTTSKPKKKSKESAKSTQKKSVDWDSLRKEAESGGRKRERTERTMD 813 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 233,416,837 Number of extensions: 4700604 Number of successful extensions: 13286 Number of sequences better than 10.0: 22 Number of HSP's gapped: 13271 Number of HSP's successfully gapped: 22 Length of query: 544 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 426 Effective length of database: 68,319,629 Effective search space: 29104161954 Effective search space used: 29104161954 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)