ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf71n16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 188 4e-44
2emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4,... 188 4e-44
3gb|AY109153.1| Zea mays PCO142755 mRNA sequence 119 3e-23
4gb|AY107661.1| Zea mays PCO103158 mRNA sequence 101 8e-18
5ref|NM_001059201.1| Oryza sativa (japonica cultivar-group) Os04g... 50 0.026
6dbj|AK059476.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.026
7emb|AL954363.27| Zebrafish DNA sequence from clone CH211-175L6 i... 48 0.10
8emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete se... 46 0.40
9emb|CR727069.2|CNS0GNYB Tetraodon nigroviridis full-length cDNA 46 0.40
10emb|CR726519.2|CNS0GNJ1 Tetraodon nigroviridis full-length cDNA 46 0.40
11gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 46 0.40
12gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome 44 1.6
13gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 44 1.6
14gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 44 1.6
15gb|AY211520.1| Xenopus laevis negatively regulating zinc finger ... 44 1.6
16dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 44 1.6
17gb|BC099055.1| Xenopus laevis hypothetical protein MGC115682, mR... 44 1.6
18gb|S57883.1| finger associated box-zinc finger {FAX elements A, ... 44 1.6
19gb|S57882.1| finger associated box-zinc finger {FAX elements A t... 44 1.6
20emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 44 1.6
21gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 44 1.6
22gb|M25873.1|XELZNF8 Xenopus laevis zinc finger protein mRNA, clo... 44 1.6
23gb|M25872.1|XELZNF7 Xenopus laevis zinc finger protein mRNA, clo... 44 1.6
24gb|M25871.1|XELZNF6 Xenopus laevis zinc finger protein mRNA, clo... 44 1.6
25gb|M25868.1|XELZNF3 Xenopus laevis zinc finger protein mRNA, clo... 44 1.6
26gb|M25866.1|XELZNF1 Xenopus laevis zinc finger protein mRNA, clo... 44 1.6
27gb|AC153157.3| Ornithorhynchus anatinus BAC clone OABb-358D20 fr... 42 6.2
28gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete ge... 42 6.2
29gb|EF015632.1| Schizochytrium sp. ATCC 20888 type I fatty acid s... 42 6.2
30gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete ... 42 6.2
31emb|CR938721.5| Platypus DNA sequence from clone CLM1-231M12, co... 42 6.2
32gb|AC187574.2| Rhesus macaque BAC clone CH250-33H12 from chromos... 42 6.2
33ref|XM_001085608.1| PREDICTED: Macaca mulatta similar to poly(A)... 42 6.2
34gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome 42 6.2
35gb|AC158767.3| Mus musculus chromosome 1, clone RP24-128E5, comp... 42 6.2
36gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome... 42 6.2
37gb|AC102545.9| Mus musculus chromosome 9, clone RP23-118J13, com... 42 6.2
38gb|AC093673.4| Homo sapiens BAC clone RP11-563K23 from 7, comple... 42 6.2
39gb|AC135806.4| Mus musculus BAC clone RP24-289M10 from chromosom... 42 6.2
40gb|AC131111.4| Mus musculus BAC clone RP23-449N4 from chromosome... 42 6.2
41gb|AC124548.5| Mus musculus BAC clone RP23-276P11 from 18, compl... 42 6.2
42gb|AC145982.2| Pan troglodytes BAC clone RP43-13J3 from 7, compl... 42 6.2
43gb|BC078728.1| Rattus norvegicus spermatogenesis associated 7, m... 42 6.2
44emb|BX284640.7| Zebrafish DNA sequence from clone CH211-286B5 in... 42 6.2
45gb|AY965681.1| Eptatretus stoutii nonfunctional variable lymphoc... 42 6.2
46dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 6.2
47dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 6.2
48dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 6.2
49dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 6.2
50emb|AL035689.26|HS187J11 Human DNA sequence from clone RP1-187J1... 42 6.2
51emb|AL035670.29|HS347E1 Human DNA sequence from clone RP3-347E1 ... 42 6.2
52gb|AY054120.1|AY054120 Mycobacterium smegmatis cosmid cTra12, pa... 42 6.2
53gb|AY129333.1| Mycobacterium phage Che9c, complete sequence 42 6.2
54dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic D... 42 6.2
55emb|BX569792.15| Zebrafish DNA sequence from clone CH211-197I17 ... 42 6.2
56emb|BX537249.8| Zebrafish DNA sequence from clone DKEY-77B17 in ... 42 6.2
57emb|BX323887.10| Zebrafish DNA sequence from clone CH211-274C22 ... 42 6.2
58dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic D... 42 6.2
59dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic D... 42 6.2
60emb|CR405690.6| Zebrafish DNA sequence from clone CH211-208M13 i... 42 6.2
61dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic D... 42 6.2
62dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic D... 42 6.2
63gb|AC087557.20| Mus musculus strain C57BL/6J chromosome 9 clone ... 42 6.2
64gb|AC010287.9| Homo sapiens chromosome 16 clone CTA-331F8, compl... 42 6.2
65emb|CR522984.1| Gallus gallus finished cDNA, clone ChEST525o7 42 6.2
66gb|AC012183.9| Homo sapiens chromosome 16 clone RP11-451N19, com... 42 6.2
67emb|BX000437.7| Zebrafish DNA sequence from clone DKEY-106O5 in ... 42 6.2
68ref|NM_138862.1| Rattus norvegicus spermatogenesis associated 7 ... 42 6.2
69gb|AC117771.17| Mus musculus chromosome 1, clone RP24-512A5, com... 42 6.2
70emb|AL953847.13| Zebrafish DNA sequence from clone CH211-255A4 i... 42 6.2
71emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb... 42 6.2
72gb|AF021791.1|AF021791 Mus musculus repeat element upstream of t... 42 6.2
73gb|AC147232.4| Mus musculus BAC clone RP23-311C15 from 7, comple... 42 6.2
74dbj|AB037674.1| Paralichthys olivaceus VDRa mRNA for vitamin D r... 42 6.2
75dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic D... 42 6.2

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469
 Score =  188 bits (95), Expect = 4e-44
 Identities = 244/293 (83%), Gaps = 3/293 (1%)
 Strand = Plus / Plus

                                                                            
Query: 836      gtgaaacctatactgaagaggaaggaggagcaagccgattcaaaaccaaggaagcgtgtg 895
                |||||||||||||||||| ||||||||||||||| ||||||||| |||||||| ||||| 
Sbjct: 19620431 gtgaaacctatactgaagcggaaggaggagcaaggcgattcaaagccaaggaaacgtgtc 19620490

                                                                            
Query: 896      aggtttaatgctgatgttaaagaacaaccagtggagcttcttgaacgtgatgaagattct 955
                | ||||  |||||||||||| || ||| | |  ||||| | |||||  ||||||||||||
Sbjct: 19620491 aagtttgctgctgatgttaaggaccaatcggcagagctgcctgaacaggatgaagattct 19620550

                                                                            
Query: 956      cccatggttcctcagtccatggatgtggtcacaacaaagggcaactcctccacgcgatct 1015
                |||||||||||||| ||||||||| |||||| |   ||||   |||| ||||| | ||||
Sbjct: 19620551 cccatggttcctcaatccatggatttggtcatagggaagg---actcatccactccatct 19620607

                                                                            
Query: 1016     gaggctcgtggggttccagactatgttaggaacccttcaaagtacacatgttacactcta 1075
                ||| ||| ||||||||| |||||||||| ||||||| ||||||| ||| |||||||||| 
Sbjct: 19620608 gagtctcctggggttcctgactatgttaagaaccctgcaaagtatacacgttacactctg 19620667

                                                                     
Query: 1076     gagacaccagagagtactgatgaatctaataggagagctcttgcagacttgca 1128
                || || |||||  |||  |||||| |||| ||||||||| |||| ||| ||||
Sbjct: 19620668 gacactccagaatgtaacgatgaaactaacaggagagcttttgccgacctgca 19620720



 Score =  129 bits (65), Expect = 3e-26
 Identities = 116/133 (87%)
 Strand = Plus / Plus

                                                                            
Query: 531      aggaagaggaggacaaatatgatagagcggcatttggcagagaggatgctgcagatcgtg 590
                ||||||| |||||||| ||||| |||| ||||||||| ||||||||||||   || ||||
Sbjct: 19620126 aggaagaagaggacaagtatgacagagaggcatttggtagagaggatgcttttgaccgtg 19620185

                                                                            
Query: 591      tgtacatgagtgaaatcatggatgatggcatgaatatgagtatcaatactgtagtgcctg 650
                | ||||||| ||||||||||||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 19620186 tatacatgaatgaaatcatggatgatggcattaacatgagcatcaacactgtggtgcctg 19620245

                             
Query: 651      acctccttgatga 663
                || ||||||||||
Sbjct: 19620246 acatccttgatga 19620258



 Score =  111 bits (56), Expect = 8e-21
 Identities = 134/160 (83%)
 Strand = Plus / Plus

                                                                            
Query: 140      ggggaggggttcgaagagcgggtgaagcggctcttcgggtcgcatctcttcggcgacgtc 199
                |||||||||||||| ||||||||||||||||| |||||||||   || |||| |||||| 
Sbjct: 19619107 ggggaggggttcgaggagcgggtgaagcggctgttcgggtcgaggctgttcgacgacgtg 19619166

                                                                            
Query: 200      ccgagctcctccttcccggcagcttcctggtccgtcgccgccggagatgttgagcgccag 259
                ||| | || ||||||||||| || || ||||| || || ||||| || || ||||| | |
Sbjct: 19619167 ccggggtcgtccttcccggcggcgtcgtggtcggtggcggccggggacgtggagcggcgg 19619226

                                                        
Query: 260      cgctgggcgcgtccgtcggaggcccgcgacgaggaggagg 299
                || ||||||   ||||||||||||||||||||||||||||
Sbjct: 19619227 cggtgggcgaagccgtcggaggcccgcgacgaggaggagg 19619266



 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 139/173 (80%), Gaps = 3/173 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1180     tgagattcctagttcagtcacattcatccctaggaagaagtcagttgatgccatggtggt 1239
                |||||| |||| |||||| || ||||||||  |||||||| || | ||||| |||   ||
Sbjct: 19620766 tgagatacctacttcagttacgttcatcccacggaagaagacaatcgatgcaatgacagt 19620825

                                                                            
Query: 1240     ggatgagggccccaaatttagtgacgcaaacccatctctcattagtgcagcagcagcagt 1299
                 |||||||| |||||||  | ||| |||||| ||||||||||| ||   || ||||  ||
Sbjct: 19620826 agatgagggtcccaaatccaatgatgcaaactcatctctcattggtctggcggcag--gt 19620883

                                                                     
Query: 1300     agcctctgacggaactgaccaatgtgagatggatgaagatgaccctaaagcat 1352
                 |||||||| | |||||| ||||| || |||||||||||||| ||||||||||
Sbjct: 19620884 -gcctctgatgaaactgagcaatgcgaaatggatgaagatgatcctaaagcat 19620935



 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                     
Query: 497      gtttcgatcggcctcgacccgactctggatcgggagg 533
                ||||| |||||||||||||||||||||||||| ||||
Sbjct: 19619497 gtttccatcggcctcgacccgactctggatcgagagg 19619533



 Score = 44.1 bits (22), Expect = 1.6
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 338      tccgcgttttacgatgccaacgggtgcctccgcg 371
                |||||||| ||||| | |||||||||||||||||
Sbjct: 19619314 tccgcgttctacgacgacaacgggtgcctccgcg 19619347



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>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07,
             complete sequence
          Length = 166410

 Score =  188 bits (95), Expect = 4e-44
 Identities = 244/293 (83%), Gaps = 3/293 (1%)
 Strand = Plus / Plus

                                                                         
Query: 836   gtgaaacctatactgaagaggaaggaggagcaagccgattcaaaaccaaggaagcgtgtg 895
             |||||||||||||||||| ||||||||||||||| ||||||||| |||||||| ||||| 
Sbjct: 71157 gtgaaacctatactgaagcggaaggaggagcaaggcgattcaaagccaaggaaacgtgtc 71216

                                                                         
Query: 896   aggtttaatgctgatgttaaagaacaaccagtggagcttcttgaacgtgatgaagattct 955
             | ||||  |||||||||||| || ||| | |  ||||| | |||||  ||||||||||||
Sbjct: 71217 aagtttgctgctgatgttaaggaccaatcggcagagctgcctgaacaggatgaagattct 71276

                                                                         
Query: 956   cccatggttcctcagtccatggatgtggtcacaacaaagggcaactcctccacgcgatct 1015
             |||||||||||||| ||||||||| |||||| |   ||||   |||| ||||| | ||||
Sbjct: 71277 cccatggttcctcaatccatggatttggtcatagggaagg---actcatccactccatct 71333

                                                                         
Query: 1016  gaggctcgtggggttccagactatgttaggaacccttcaaagtacacatgttacactcta 1075
             ||| ||| ||||||||| |||||||||| ||||||| ||||||| ||| |||||||||| 
Sbjct: 71334 gagtctcctggggttcctgactatgttaagaaccctgcaaagtatacacgttacactctg 71393

                                                                  
Query: 1076  gagacaccagagagtactgatgaatctaataggagagctcttgcagacttgca 1128
             || || |||||  |||  |||||| |||| ||||||||| |||| ||| ||||
Sbjct: 71394 gacactccagaatgtaacgatgaaactaacaggagagcttttgccgacctgca 71446



 Score =  129 bits (65), Expect = 3e-26
 Identities = 116/133 (87%)
 Strand = Plus / Plus

                                                                         
Query: 531   aggaagaggaggacaaatatgatagagcggcatttggcagagaggatgctgcagatcgtg 590
             ||||||| |||||||| ||||| |||| ||||||||| ||||||||||||   || ||||
Sbjct: 70852 aggaagaagaggacaagtatgacagagaggcatttggtagagaggatgcttttgaccgtg 70911

                                                                         
Query: 591   tgtacatgagtgaaatcatggatgatggcatgaatatgagtatcaatactgtagtgcctg 650
             | ||||||| ||||||||||||||||||||| || ||||| ||||| ||||| |||||||
Sbjct: 70912 tatacatgaatgaaatcatggatgatggcattaacatgagcatcaacactgtggtgcctg 70971

                          
Query: 651   acctccttgatga 663
             || ||||||||||
Sbjct: 70972 acatccttgatga 70984



 Score =  111 bits (56), Expect = 8e-21
 Identities = 134/160 (83%)
 Strand = Plus / Plus

                                                                         
Query: 140   ggggaggggttcgaagagcgggtgaagcggctcttcgggtcgcatctcttcggcgacgtc 199
             |||||||||||||| ||||||||||||||||| |||||||||   || |||| |||||| 
Sbjct: 69833 ggggaggggttcgaggagcgggtgaagcggctgttcgggtcgaggctgttcgacgacgtg 69892

                                                                         
Query: 200   ccgagctcctccttcccggcagcttcctggtccgtcgccgccggagatgttgagcgccag 259
             ||| | || ||||||||||| || || ||||| || || ||||| || || ||||| | |
Sbjct: 69893 ccggggtcgtccttcccggcggcgtcgtggtcggtggcggccggggacgtggagcggcgg 69952

                                                     
Query: 260   cgctgggcgcgtccgtcggaggcccgcgacgaggaggagg 299
             || ||||||   ||||||||||||||||||||||||||||
Sbjct: 69953 cggtgggcgaagccgtcggaggcccgcgacgaggaggagg 69992



 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 139/173 (80%), Gaps = 3/173 (1%)
 Strand = Plus / Plus

                                                                         
Query: 1180  tgagattcctagttcagtcacattcatccctaggaagaagtcagttgatgccatggtggt 1239
             |||||| |||| |||||| || ||||||||  |||||||| || | ||||| |||   ||
Sbjct: 71492 tgagatacctacttcagttacgttcatcccacggaagaagacaatcgatgcaatgacagt 71551

                                                                         
Query: 1240  ggatgagggccccaaatttagtgacgcaaacccatctctcattagtgcagcagcagcagt 1299
              |||||||| |||||||  | ||| |||||| ||||||||||| ||   || ||||  ||
Sbjct: 71552 agatgagggtcccaaatccaatgatgcaaactcatctctcattggtctggcggcag--gt 71609

                                                                  
Query: 1300  agcctctgacggaactgaccaatgtgagatggatgaagatgaccctaaagcat 1352
              |||||||| | |||||| ||||| || |||||||||||||| ||||||||||
Sbjct: 71610 -gcctctgatgaaactgagcaatgcgaaatggatgaagatgatcctaaagcat 71661



 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                  
Query: 497   gtttcgatcggcctcgacccgactctggatcgggagg 533
             ||||| |||||||||||||||||||||||||| ||||
Sbjct: 70223 gtttccatcggcctcgacccgactctggatcgagagg 70259



 Score = 44.1 bits (22), Expect = 1.6
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 338   tccgcgttttacgatgccaacgggtgcctccgcg 371
             |||||||| ||||| | |||||||||||||||||
Sbjct: 70040 tccgcgttctacgacgacaacgggtgcctccgcg 70073



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>gb|AY109153.1| Zea mays PCO142755 mRNA sequence
          Length = 723

 Score =  119 bits (60), Expect = 3e-23
 Identities = 174/212 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1034 gactatgttaggaacccttcaaagtacacatgttacactctagagacaccagagagtact 1093
            |||||||| ||||||||||||||||||||  ||||||| || ||   |||||||  || |
Sbjct: 293  gactatgtaaggaacccttcaaagtacacccgttacaccctggatgtaccagagtctaat 352

                                                                        
Query: 1094 gatgaatctaataggagagctcttgcagacttgcacaatctgttaggcagatcagatccc 1153
            ||||| || || ||||  |||||||| ||| ||||  |||||||||| |||||||| |  
Sbjct: 353  gatgactcgaacaggacggctcttgctgacctgcatgatctgttagggagatcagaccaa 412

                                                                        
Query: 1154 aacaagatgcagcctgagacacctgctgagattcctagttcagtcacattcatccctagg 1213
            |||| ||| ||  |||||||  ||| |||||||||||| |||||||||||||||||| | 
Sbjct: 413  aacaggatacattctgagactgctgttgagattcctagctcagtcacattcatccctcgc 472

                                            
Query: 1214 aagaagtcagttgatgccatggtggtggatga 1245
            || |||||||| ||||||||||  ||||||||
Sbjct: 473  aaaaagtcagtggatgccatggcagtggatga 504



 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 839 aaacctatactgaagaggaaggaggagcaagccgattcaaaaccaaggaagcgtgtgagg 898
           |||||||||||||||||||||||||||||||| ||||  ||||||||||| |||||  ||
Sbjct: 98  aaacctatactgaagaggaaggaggagcaagcggatttgaaaccaaggaaacgtgtccgg 157

                            
Query: 899 tttaatgctgatgttaa 915
           ||| ||||| |||||||
Sbjct: 158 tttgatgctaatgttaa 174



 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                
Query: 936 ttgaacgtgatgaagattctcccatggttcctcagtccatggatgtggtcaca 988
           |||||||||||||||||||||| ||||||||||| |||||||| || ||||||
Sbjct: 195 ttgaacgtgatgaagattctccaatggttcctcaatccatggaagtagtcaca 247



 Score = 44.1 bits (22), Expect = 1.6
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 1301 gcctctgacggaactgaccaatgtgagatggatgaagatgac 1342
            |||||||| | | |||| ||||| ||||||||||||||||||
Sbjct: 557  gcctctgatgaacctgatcaatgcgagatggatgaagatgac 598



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>gb|AY107661.1| Zea mays PCO103158 mRNA sequence
          Length = 474

 Score =  101 bits (51), Expect = 8e-18
 Identities = 78/87 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1167 ctgagacacctgctgagattcctagttcagtcacattcatccctaggaagaagtcagttg 1226
            ||||||| |||| |||||||||||| |||||||||||||||||| | ||||||||||| |
Sbjct: 68   ctgagacgcctgttgagattcctagctcagtcacattcatccctcgcaagaagtcagtgg 127

                                       
Query: 1227 atgccatggtggtggatgagggcccca 1253
            || ||||||  ||||||||||||||||
Sbjct: 128  ataccatggcagtggatgagggcccca 154



 Score = 50.1 bits (25), Expect = 0.026
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 1314 ctgaccaatgtgagatggatgaagatgac 1342
            |||| ||||||||||||||||||||||||
Sbjct: 212  ctgatcaatgtgagatggatgaagatgac 240



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>ref|NM_001059201.1| Oryza sativa (japonica cultivar-group) Os04g0397400 (Os04g0397400)
            mRNA, partial cds
          Length = 352

 Score = 50.1 bits (25), Expect = 0.026
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 1312 aactgaccaatgtgagatggatgaagatgaccctaaagcat 1352
            |||||| ||||| || |||||||||||||| ||||||||||
Sbjct: 2    aactgagcaatgcgaaatggatgaagatgatcctaaagcat 42



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>dbj|AK059476.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-E10, full
            insert sequence
          Length = 367

 Score = 50.1 bits (25), Expect = 0.026
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 1312 aactgaccaatgtgagatggatgaagatgaccctaaagcat 1352
            |||||| ||||| || |||||||||||||| ||||||||||
Sbjct: 17   aactgagcaatgcgaaatggatgaagatgatcctaaagcat 57



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>emb|AL954363.27| Zebrafish DNA sequence from clone CH211-175L6 in linkage group 3,
             complete sequence
          Length = 160599

 Score = 48.1 bits (24), Expect = 0.10
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 276   cggaggcccgcgacgaggaggaggagctcgccgcgg 311
             |||||||||  ||||||||||||||||| |||||||
Sbjct: 95563 cggaggccccggacgaggaggaggagctggccgcgg 95528



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>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence
          Length = 7497934

 Score = 46.1 bits (23), Expect = 0.40
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 293     gaggaggagctcgccgcggccgagcgcgccg 323
               ||||| ||||||||||||| |||||||||||
Sbjct: 3312553 gaggacgagctcgccgcggtcgagcgcgccg 3312583



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>emb|CR727069.2|CNS0GNYB Tetraodon nigroviridis full-length cDNA
          Length = 1661

 Score = 46.1 bits (23), Expect = 0.40
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 521 ctggatcgggaggaagaggagga 543
           |||||||||||||||||||||||
Sbjct: 891 ctggatcgggaggaagaggagga 913



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>emb|CR726519.2|CNS0GNJ1 Tetraodon nigroviridis full-length cDNA
          Length = 1502

 Score = 46.1 bits (23), Expect = 0.40
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 521 ctggatcgggaggaagaggagga 543
           |||||||||||||||||||||||
Sbjct: 865 ctggatcgggaggaagaggagga 887



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.40
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 301     gctcgccgcggccgagcgcgccg 323
               |||||||||||||||||||||||
Sbjct: 3598893 gctcgccgcggccgagcgcgccg 3598915



 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 304     cgccgcggccgagcgcgccga 324
               |||||||||||||||||||||
Sbjct: 1554737 cgccgcggccgagcgcgccga 1554757



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>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome
          Length = 3225748

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 278    gaggcccgcgacgaggaggaggagctcgcc 307
              ||||||||||||||||  ||||||||||||
Sbjct: 791493 gaggcccgcgacgaggtcgaggagctcgcc 791522



 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 300    agctcgccgcggccgagcgcg 320
              |||||||||||||||||||||
Sbjct: 858572 agctcgccgcggccgagcgcg 858592



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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 161     gtgaagcggctcttcgggtcgc 182
               ||||||||||||||||||||||
Sbjct: 1229370 gtgaagcggctcttcgggtcgc 1229391



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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 161     gtgaagcggctcttcgggtcgc 182
               ||||||||||||||||||||||
Sbjct: 2276019 gtgaagcggctcttcgggtcgc 2275998



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>gb|AY211520.1| Xenopus laevis negatively regulating zinc finger protein (NZFP) mRNA,
            complete cds
          Length = 2197

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 1204 catccctaggaagaagtcagttgatg 1229
            |||||||||||||||||||| |||||
Sbjct: 223  catccctaggaagaagtcagatgatg 248



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>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111
          Length = 2356219

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 1093    tgatgaatctaataggagagctcttg 1118
               |||||||||||||||||||| |||||
Sbjct: 1974210 tgatgaatctaataggagagttcttg 1974235



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>gb|BC099055.1| Xenopus laevis hypothetical protein MGC115682, mRNA (cDNA clone
            MGC:115682 IMAGE:6325209), complete cds
          Length = 2913

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 1204 catccctaggaagaagtcagttgatg 1229
            |||||||||||||||||||| |||||
Sbjct: 240  catccctaggaagaagtcagatgatg 265



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>gb|S57883.1| finger associated box-zinc finger {FAX elements A, C, and D, clone
            XFG 48-2} [Xenopus laevis, Genomic, 537 nt]
          Length = 537

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 1204 catccctaggaagaagtcagttgatg 1229
            |||||||||||||||||||| |||||
Sbjct: 202  catccctaggaagaagtcagatgatg 227



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>gb|S57882.1| finger associated box-zinc finger {FAX elements A to F, clone XFG
            66-1} [Xenopus laevis, Genomic, 587 nt]
          Length = 587

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 1204 catccctaggaagaagtcagttgatg 1229
            |||||||||||||||||||| |||||
Sbjct: 253  catccctaggaagaagtcagatgatg 278



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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 161     gtgaagcggctcttcgggtcgc 182
               ||||||||||||||||||||||
Sbjct: 2098688 gtgaagcggctcttcgggtcgc 2098709



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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 294     aggaggagctcgccgcggccgagcgc 319
               ||||| ||||||||||||||||||||
Sbjct: 1184163 aggagaagctcgccgcggccgagcgc 1184138



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>gb|M25873.1|XELZNF8 Xenopus laevis zinc finger protein mRNA, clone XLcGF66.1
          Length = 917

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 1204 catccctaggaagaagtcagttgatg 1229
            |||||||||||||||||||| |||||
Sbjct: 182  catccctaggaagaagtcagatgatg 207



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>gb|M25872.1|XELZNF7 Xenopus laevis zinc finger protein mRNA, clone XLcGF53.1
          Length = 1061

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 1204 catccctaggaagaagtcagttgatg 1229
            |||||||||||||||||||| |||||
Sbjct: 212  catccctaggaagaagtcagatgatg 237



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>gb|M25871.1|XELZNF6 Xenopus laevis zinc finger protein mRNA, clone XLcGF48.2
          Length = 1030

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 1204 catccctaggaagaagtcagttgatg 1229
            |||||||||||||||||||| |||||
Sbjct: 112  catccctaggaagaagtcagatgatg 137



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>gb|M25868.1|XELZNF3 Xenopus laevis zinc finger protein mRNA, clone XLcOF8.4
          Length = 816

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 1204 catccctaggaagaagtcagttgatg 1229
            |||||||||||||||||||| |||||
Sbjct: 57   catccctaggaagaagtcagatgatg 82



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>gb|M25866.1|XELZNF1 Xenopus laevis zinc finger protein mRNA, clone XLcOF7.1
          Length = 1076

 Score = 44.1 bits (22), Expect = 1.6
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 1204 catccctaggaagaagtcagttgatg 1229
            |||||||||||||||||||| |||||
Sbjct: 287  catccctaggaagaagtcagatgatg 312



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>gb|AC153157.3| Ornithorhynchus anatinus BAC clone OABb-358D20 from chromosome unknown,
             complete sequence
          Length = 140241

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 209   tccttcccggcagcttcctgg 229
             |||||||||||||||||||||
Sbjct: 85755 tccttcccggcagcttcctgg 85775



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>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome
          Length = 6988209

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 990     caaagggcaactcctccacgcgatc 1014
               ||||||||||||||| |||||||||
Sbjct: 6901847 caaagggcaactcctgcacgcgatc 6901823



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>gb|EF015632.1| Schizochytrium sp. ATCC 20888 type I fatty acid synthase gene,
            complete cds
          Length = 12411

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 293  gaggaggagctcgccgcggcc 313
            |||||||||||||||||||||
Sbjct: 6187 gaggaggagctcgccgcggcc 6207



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>gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete sequence
          Length = 3556545

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 303     tcgccgcggccgagcgcgccg 323
               |||||||||||||||||||||
Sbjct: 1378152 tcgccgcggccgagcgcgccg 1378132



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>emb|CR938721.5| Platypus DNA sequence from clone CLM1-231M12, complete sequence
          Length = 171880

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 209   tccttcccggcagcttcctgg 229
             |||||||||||||||||||||
Sbjct: 85851 tccttcccggcagcttcctgg 85871



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>gb|AC187574.2| Rhesus macaque BAC clone CH250-33H12 from chromosome unknown, complete
              sequence
          Length = 209629

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 655    ccttgatgacaccattgatga 675
              |||||||||||||||||||||
Sbjct: 195353 ccttgatgacaccattgatga 195333



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>ref|XM_001085608.1| PREDICTED: Macaca mulatta similar to poly(A) binding protein,
           cytoplasmic 4 (inducible form) (LOC695433), mRNA
          Length = 4706

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 655 ccttgatgacaccattgatga 675
           |||||||||||||||||||||
Sbjct: 924 ccttgatgacaccattgatga 944



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>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome
          Length = 9139763

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 303     tcgccgcggccgagcgcgccg 323
               |||||||||||||||||||||
Sbjct: 5517899 tcgccgcggccgagcgcgccg 5517919



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>gb|AC158767.3| Mus musculus chromosome 1, clone RP24-128E5, complete sequence
          Length = 188758

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 944   gatgaagattctcccatggttcctcagtc 972
             ||||| |||||||||| ||||||||||||
Sbjct: 44438 gatgaggattctcccagggttcctcagtc 44410



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>gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0537C11,
              complete sequence
          Length = 146677

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 281    gcccgcgacgaggaggaggagctcgccgc 309
              |||| ||||||||||||||||| ||||||
Sbjct: 101713 gcccacgacgaggaggaggagcccgccgc 101685



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>gb|AC102545.9| Mus musculus chromosome 9, clone RP23-118J13, complete sequence
          Length = 241789

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1282  tagtgcagcagcagcagtagc 1302
             |||||||||||||||||||||
Sbjct: 84064 tagtgcagcagcagcagtagc 84044



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>gb|AC093673.4| Homo sapiens BAC clone RP11-563K23 from 7, complete sequence
          Length = 33449

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 6    aacccccatctcaaacccaca 26
            |||||||||||||||||||||
Sbjct: 2060 aacccccatctcaaacccaca 2040



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>gb|AC135806.4| Mus musculus BAC clone RP24-289M10 from chromosome 18, complete sequence
          Length = 179327

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1072   tctagagacaccagagagtac 1092
              |||||||||||||||||||||
Sbjct: 134545 tctagagacaccagagagtac 134525



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>gb|AC131111.4| Mus musculus BAC clone RP23-449N4 from chromosome 7, complete sequence
          Length = 179068

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1154   aacaagatgcagcctgagaca 1174
              |||||||||||||||||||||
Sbjct: 160440 aacaagatgcagcctgagaca 160420



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>gb|AC124548.5| Mus musculus BAC clone RP23-276P11 from 18, complete sequence
          Length = 173805

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1072  tctagagacaccagagagtac 1092
             |||||||||||||||||||||
Sbjct: 63390 tctagagacaccagagagtac 63370



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>gb|AC145982.2| Pan troglodytes BAC clone RP43-13J3 from 7, complete sequence
          Length = 141213

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 6      aacccccatctcaaacccaca 26
              |||||||||||||||||||||
Sbjct: 111825 aacccccatctcaaacccaca 111805



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>gb|BC078728.1| Rattus norvegicus spermatogenesis associated 7, mRNA (cDNA clone
            MGC:93176 IMAGE:7114267), complete cds
          Length = 1615

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 1378 gatgcagaccaactctaagatgaactcca 1406
            |||||||||||| ||||||||||| ||||
Sbjct: 392  gatgcagaccaattctaagatgaattcca 420



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>emb|BX284640.7| Zebrafish DNA sequence from clone CH211-286B5 in linkage group 2,
              complete sequence
          Length = 158537

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 1162   gcagcctgagacacctgctgagatt 1186
              |||||||||||||||||| ||||||
Sbjct: 127361 gcagcctgagacacctgcagagatt 127337



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>gb|AY965681.1| Eptatretus stoutii nonfunctional variable lymphocyte receptor B (VLRB)
             gene, complete sequence
          Length = 76730

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 530   gaggaagaggaggacaaatat 550
             |||||||||||||||||||||
Sbjct: 42154 gaggaagaggaggacaaatat 42174



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 290     gaggaggaggagctcgccgcg 310
               |||||||||||||||||||||
Sbjct: 9863881 gaggaggaggagctcgccgcg 9863861



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 281     gcccgcgacgaggaggaggagctcgccgc 309
               |||| ||||||||||||||||| ||||||
Sbjct: 9329768 gcccacgacgaggaggaggagcccgccgc 9329740



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 823      tcaggatatcggtgtgaaacc 843
                |||||||||||||||||||||
Sbjct: 21563832 tcaggatatcggtgtgaaacc 21563852



 Score = 42.1 bits (21), Expect = 6.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 281      gcccgcgacgaggaggaggagctcgccgc 309
                |||| ||||||||||||||||| ||||||
Sbjct: 31982130 gcccacgacgaggaggaggagcccgccgc 31982102



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 281      gcccgcgacgaggaggaggagctcgccgc 309
                |||| ||||||||||||||||| ||||||
Sbjct: 40598807 gcccacgacgaggaggaggagcccgccgc 40598779



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>emb|AL035689.26|HS187J11 Human DNA sequence from clone RP1-187J11 on chromosome 6q11.1-22.33
             Contains the 3' part of the gene for endoplasmic reticulum
             associated protein 140 kDa (ERAP140) (similar to nucleolar
             protein C7B), the gene for a novel protein similar to
             protein kinase C inhibitors, the gene for MDS024 protein
             and two putative CpG islands, complete sequence
          Length = 144364

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1472  tttaagaaactttacaagttt 1492
             |||||||||||||||||||||
Sbjct: 68159 tttaagaaactttacaagttt 68179



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>emb|AL035670.29|HS347E1 Human DNA sequence from clone RP3-347E1 on chromosome 6p11.2-21.1
             Contains the 3' end of the CYP39A1 gene for cytochrome
             P450 subfamily XXXIX (oxysterol 7 alpha-hydroxylase)
             polypeptide 1 and a novel gene, complete sequence
          Length = 96618

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1472  tttaagaaactttacaagttt 1492
             |||||||||||||||||||||
Sbjct: 60324 tttaagaaactttacaagttt 60344



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>gb|AY054120.1|AY054120 Mycobacterium smegmatis cosmid cTra12, partial sequence
          Length = 30277

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 990   caaagggcaactcctccacgcgatc 1014
             ||||||||||||||| |||||||||
Sbjct: 16820 caaagggcaactcctgcacgcgatc 16844



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>gb|AY129333.1| Mycobacterium phage Che9c, complete sequence
          Length = 57050

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1236  tggtggatgagggccccaaat 1256
             |||||||||||||||||||||
Sbjct: 27393 tggtggatgagggccccaaat 27413



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>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0093F16
          Length = 160925

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 281   gcccgcgacgaggaggaggagctcgccgc 309
             |||| ||||||||||||||||| ||||||
Sbjct: 40785 gcccacgacgaggaggaggagcccgccgc 40757



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>emb|BX569792.15| Zebrafish DNA sequence from clone CH211-197I17 in linkage group 16,
              complete sequence
          Length = 234579

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1280   attagtgcagcagcagcagta 1300
              |||||||||||||||||||||
Sbjct: 137495 attagtgcagcagcagcagta 137475



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>emb|BX537249.8| Zebrafish DNA sequence from clone DKEY-77B17 in linkage group 20,
             complete sequence
          Length = 92426

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1068  acactctagagacaccagaga 1088
             |||||||||||||||||||||
Sbjct: 33919 acactctagagacaccagaga 33899



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>emb|BX323887.10| Zebrafish DNA sequence from clone CH211-274C22 in linkage group 13,
              complete sequence
          Length = 134841

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1068   acactctagagacaccagaga 1088
              |||||||||||||||||||||
Sbjct: 127795 acactctagagacaccagaga 127775



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>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0020D05
          Length = 158760

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 823   tcaggatatcggtgtgaaacc 843
             |||||||||||||||||||||
Sbjct: 52782 tcaggatatcggtgtgaaacc 52802



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>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0020C11
          Length = 163328

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 823    tcaggatatcggtgtgaaacc 843
              |||||||||||||||||||||
Sbjct: 158759 tcaggatatcggtgtgaaacc 158779



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>emb|CR405690.6| Zebrafish DNA sequence from clone CH211-208M13 in linkage group 22,
             complete sequence
          Length = 195552

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1068  acactctagagacaccagaga 1088
             |||||||||||||||||||||
Sbjct: 17219 acactctagagacaccagaga 17199



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>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0471A11
          Length = 157740

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 281    gcccgcgacgaggaggaggagctcgccgc 309
              |||| ||||||||||||||||| ||||||
Sbjct: 143131 gcccacgacgaggaggaggagcccgccgc 143103



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>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1175_B01
          Length = 96191

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 281  gcccgcgacgaggaggaggagctcgccgc 309
            |||| ||||||||||||||||| ||||||
Sbjct: 2505 gcccacgacgaggaggaggagcccgccgc 2477



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>gb|AC087557.20| Mus musculus strain C57BL/6J chromosome 9 clone rp23-184f1, complete
              sequence
          Length = 186745

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1282   tagtgcagcagcagcagtagc 1302
              |||||||||||||||||||||
Sbjct: 171224 tagtgcagcagcagcagtagc 171204



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>gb|AC010287.9| Homo sapiens chromosome 16 clone CTA-331F8, complete sequence
          Length = 198949

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 208    ctccttcccggcagcttcctg 228
              |||||||||||||||||||||
Sbjct: 172083 ctccttcccggcagcttcctg 172063



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>emb|CR522984.1| Gallus gallus finished cDNA, clone ChEST525o7
          Length = 850

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 285 gcgacgaggaggaggagctcg 305
           |||||||||||||||||||||
Sbjct: 564 gcgacgaggaggaggagctcg 584



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>gb|AC012183.9| Homo sapiens chromosome 16 clone RP11-451N19, complete sequence
          Length = 220173

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 208    ctccttcccggcagcttcctg 228
              |||||||||||||||||||||
Sbjct: 164698 ctccttcccggcagcttcctg 164718



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>emb|BX000437.7| Zebrafish DNA sequence from clone DKEY-106O5 in linkage group 5,
             complete sequence
          Length = 178961

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 663   acaccattgatgagatctgcg 683
             |||||||||||||||||||||
Sbjct: 16951 acaccattgatgagatctgcg 16931



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>ref|NM_138862.1| Rattus norvegicus spermatogenesis associated 7 (Spata7), mRNA
 gb|AF094609.1|AF094609 Rattus norvegicus fertility related protein WMP1 mRNA, complete cds
          Length = 2228

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 1378 gatgcagaccaactctaagatgaactcca 1406
            |||||||||||| ||||||||||| ||||
Sbjct: 687  gatgcagaccaattctaagatgaattcca 715



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>gb|AC117771.17| Mus musculus chromosome 1, clone RP24-512A5, complete sequence
          Length = 161292

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 944    gatgaagattctcccatggttcctcagtc 972
              ||||| |||||||||| ||||||||||||
Sbjct: 153409 gatgaggattctcccagggttcctcagtc 153437



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>emb|AL953847.13| Zebrafish DNA sequence from clone CH211-255A4 in linkage group 3,
             complete sequence
          Length = 144933

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1068  acactctagagacaccagaga 1088
             |||||||||||||||||||||
Sbjct: 59229 acactctagagacaccagaga 59249



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>emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb0112E17 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 140806

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 290   gaggaggaggagctcgccgcg 310
             |||||||||||||||||||||
Sbjct: 68589 gaggaggaggagctcgccgcg 68609



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>gb|AF021791.1|AF021791 Mus musculus repeat element upstream of the Rasgrf1/Cdc25Mm gene
          Length = 2017

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1282 tagtgcagcagcagcagtagc 1302
            |||||||||||||||||||||
Sbjct: 147  tagtgcagcagcagcagtagc 127



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>gb|AC147232.4| Mus musculus BAC clone RP23-311C15 from 7, complete sequence
          Length = 191521

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1154  aacaagatgcagcctgagaca 1174
             |||||||||||||||||||||
Sbjct: 28467 aacaagatgcagcctgagaca 28447



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>dbj|AB037674.1| Paralichthys olivaceus VDRa mRNA for vitamin D receptor a, complete
           cds
          Length = 2429

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 845 atactgaagaggaaggaggag 865
           |||||||||||||||||||||
Sbjct: 587 atactgaagaggaaggaggag 607



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>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0482D04
          Length = 144583

 Score = 42.1 bits (21), Expect = 6.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 281   gcccgcgacgaggaggaggagctcgccgc 309
             |||| ||||||||||||||||| ||||||
Sbjct: 78822 gcccacgacgaggaggaggagcccgccgc 78794


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 257,213,884
Number of extensions: 14849420
Number of successful extensions: 382014
Number of sequences better than 10.0: 75
Number of HSP's gapped: 382011
Number of HSP's successfully gapped: 94
Length of query: 1632
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1609
Effective length of database: 18,503,978,556
Effective search space: 29772901496604
Effective search space used: 29772901496604
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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