ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf69b21 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK243472.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100072E06, full insert sequence Length = 1459 Score = 220 bits (111), Expect = 1e-53 Identities = 156/171 (91%) Strand = Plus / Plus Query: 644 cggcgtcggcgcggagcggctggagagggcgatgcgggtggaaggcttgctgatggcgtg 703 ||||||||| ||||||||||||||| ||| ||||| |||||| || | |||||||||||| Sbjct: 706 cggcgtcggggcggagcggctggagcgggagatgcaggtggaggggtggctgatggcgtg 765 Query: 704 ccactattacccgccgtgcccggagccggcgcgggtggtcggcagcctggggcacacgga 763 |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||| || Sbjct: 766 ccactactacccgccgtgcccggagccggagcgggtggtcggcagcctggagcacaccga 825 Query: 764 ccccagcctcttcaccgtcctggcgcaggacggggtcggagggctccaggt 814 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 826 ccccagcctcttcaccgtcctggcgcaggacgccgtcggcgggctgcaggt 876 Score = 123 bits (62), Expect = 2e-24 Identities = 167/202 (82%) Strand = Plus / Plus Query: 833 gtgggccgacgtgctgccggtgcccggcgcacttctgctcaacatcggggatgtgctcaa 892 ||||| ||||||| |||||| |||||||||| || ||||| ||||||| |||||||| Sbjct: 916 gtgggtcgacgtggcgccggtcgccggcgcactggtggtcaacgtcggggacgtgctcaa 975 Query: 893 ggtggtttcaaatgatgagtacgagagcgtggagcacagggtggtgatcaagtcctgtca 952 | ||||||| || || |||||| ||||||||||||||||||||||||||||||| | || Sbjct: 976 gatggtttcgaacgaggagtacaagagcgtggagcacagggtggtgatcaagtctagcca 1035 Query: 953 agatgcgagggtgtccattgcactcttctttaatccctccaagcgccgggaatccgactt 1012 ||| || ||||| |||||||| ||||||| || || |||||||| | |||||| | Sbjct: 1036 agacgccagggtctccattgctgtcttcttcaacccagccaagcgcgatgcctccgacct 1095 Query: 1013 gtttgggccgctcccggagctc 1034 ||| ||||| |||||||||||| Sbjct: 1096 gttcgggcccctcccggagctc 1117 Score = 97.6 bits (49), Expect = 1e-16 Identities = 73/81 (90%) Strand = Plus / Plus Query: 69 ctggccgagttccaggcggcccgcgccggcgtccgcggcctcgtcgagtccggcatcacc 128 |||||||||||||| ||| | ||||||||||||||||||||||||||||| ||| |||| Sbjct: 89 ctggccgagttccacgcgtcgcgcgccggcgtccgcggcctcgtcgagtctggcgccacc 148 Query: 129 tccgtgccgccgctcttcctc 149 ||||||| |||||||||||| Sbjct: 149 gccgtgccaccgctcttcctc 169 Score = 89.7 bits (45), Expect = 3e-14 Identities = 93/109 (85%) Strand = Plus / Plus Query: 215 cttcaccatcccaagcgttgacctcgcactcccgctctcatccaccctgccgctcatccg 274 |||| ||||||| | |||||||||| | ||||||| ||| ||||| | |||||| |||| Sbjct: 226 cttcgccatcccgaccgttgacctctccctcccgcgctcggccaccgtcccgctcgtccg 285 Query: 275 cgccgccgcacgctcgtgcggcttcttccacgtaaccaaccacggcgtc 323 ||||||||| ||||||||||||||||||||| |||| |||||||||| Sbjct: 286 cgccgccgcgacctcgtgcggcttcttccacgtcaccagccacggcgtc 334 Score = 73.8 bits (37), Expect = 1e-09 Identities = 52/57 (91%) Strand = Plus / Plus Query: 598 tgacggagctcgggaagaagatggcggggctgctgtcggaggcgctcggcgtcggcg 654 |||||| | |||||||| ||||||| ||||||||||||||||||||||||| ||||| Sbjct: 639 tgacggtgttcgggaaggagatggccgggctgctgtcggaggcgctcggcggcggcg 695 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Plus Query: 430 cctactccaccatccccatccag 452 ||||||||||||||||||||||| Sbjct: 441 cctactccaccatccccatccag 463
>ref|NM_001049795.1| Oryza sativa (japonica cultivar-group) Os01g0536400 (Os01g0536400) mRNA, complete cds Length = 1191 Score = 220 bits (111), Expect = 1e-53 Identities = 156/171 (91%) Strand = Plus / Plus Query: 644 cggcgtcggcgcggagcggctggagagggcgatgcgggtggaaggcttgctgatggcgtg 703 ||||||||| ||||||||||||||| ||| ||||| |||||| || | |||||||||||| Sbjct: 660 cggcgtcggggcggagcggctggagcgggagatgcaggtggaggggtggctgatggcgtg 719 Query: 704 ccactattacccgccgtgcccggagccggcgcgggtggtcggcagcctggggcacacgga 763 |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||| || Sbjct: 720 ccactactacccgccgtgcccggagccggagcgggtggtcggcagcctggagcacaccga 779 Query: 764 ccccagcctcttcaccgtcctggcgcaggacggggtcggagggctccaggt 814 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 780 ccccagcctcttcaccgtcctggcgcaggacgccgtcggcgggctgcaggt 830 Score = 123 bits (62), Expect = 2e-24 Identities = 167/202 (82%) Strand = Plus / Plus Query: 833 gtgggccgacgtgctgccggtgcccggcgcacttctgctcaacatcggggatgtgctcaa 892 ||||| ||||||| |||||| |||||||||| || ||||| ||||||| |||||||| Sbjct: 870 gtgggtcgacgtggcgccggtcgccggcgcactggtggtcaacgtcggggacgtgctcaa 929 Query: 893 ggtggtttcaaatgatgagtacgagagcgtggagcacagggtggtgatcaagtcctgtca 952 | ||||||| || || |||||| ||||||||||||||||||||||||||||||| | || Sbjct: 930 gatggtttcgaacgaggagtacaagagcgtggagcacagggtggtgatcaagtctagcca 989 Query: 953 agatgcgagggtgtccattgcactcttctttaatccctccaagcgccgggaatccgactt 1012 ||| || ||||| |||||||| ||||||| || || |||||||| | |||||| | Sbjct: 990 agacgccagggtctccattgctgtcttcttcaacccagccaagcgcgatgcctccgacct 1049 Query: 1013 gtttgggccgctcccggagctc 1034 ||| ||||| |||||||||||| Sbjct: 1050 gttcgggcccctcccggagctc 1071 Score = 97.6 bits (49), Expect = 1e-16 Identities = 73/81 (90%) Strand = Plus / Plus Query: 69 ctggccgagttccaggcggcccgcgccggcgtccgcggcctcgtcgagtccggcatcacc 128 |||||||||||||| ||| | ||||||||||||||||||||||||||||| ||| |||| Sbjct: 43 ctggccgagttccacgcgtcgcgcgccggcgtccgcggcctcgtcgagtctggcgccacc 102 Query: 129 tccgtgccgccgctcttcctc 149 ||||||| |||||||||||| Sbjct: 103 gccgtgccaccgctcttcctc 123 Score = 89.7 bits (45), Expect = 3e-14 Identities = 93/109 (85%) Strand = Plus / Plus Query: 215 cttcaccatcccaagcgttgacctcgcactcccgctctcatccaccctgccgctcatccg 274 |||| ||||||| | |||||||||| | ||||||| ||| ||||| | |||||| |||| Sbjct: 180 cttcgccatcccgaccgttgacctctccctcccgcgctcggccaccgtcccgctcgtccg 239 Query: 275 cgccgccgcacgctcgtgcggcttcttccacgtaaccaaccacggcgtc 323 ||||||||| ||||||||||||||||||||| |||| |||||||||| Sbjct: 240 cgccgccgcgacctcgtgcggcttcttccacgtcaccagccacggcgtc 288 Score = 73.8 bits (37), Expect = 1e-09 Identities = 52/57 (91%) Strand = Plus / Plus Query: 598 tgacggagctcgggaagaagatggcggggctgctgtcggaggcgctcggcgtcggcg 654 |||||| | |||||||| ||||||| ||||||||||||||||||||||||| ||||| Sbjct: 593 tgacggtgttcgggaaggagatggccgggctgctgtcggaggcgctcggcggcggcg 649 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Plus Query: 430 cctactccaccatccccatccag 452 ||||||||||||||||||||||| Sbjct: 395 cctactccaccatccccatccag 417
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 220 bits (111), Expect = 1e-53 Identities = 156/171 (91%) Strand = Plus / Minus Query: 644 cggcgtcggcgcggagcggctggagagggcgatgcgggtggaaggcttgctgatggcgtg 703 ||||||||| ||||||||||||||| ||| ||||| |||||| || | |||||||||||| Sbjct: 19503818 cggcgtcggggcggagcggctggagcgggagatgcaggtggaggggtggctgatggcgtg 19503759 Query: 704 ccactattacccgccgtgcccggagccggcgcgggtggtcggcagcctggggcacacgga 763 |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||| || Sbjct: 19503758 ccactactacccgccgtgcccggagccggagcgggtggtcggcagcctggagcacaccga 19503699 Query: 764 ccccagcctcttcaccgtcctggcgcaggacggggtcggagggctccaggt 814 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 19503698 ccccagcctcttcaccgtcctggcgcaggacgccgtcggcgggctgcaggt 19503648 Score = 97.6 bits (49), Expect = 1e-16 Identities = 73/81 (90%) Strand = Plus / Minus Query: 69 ctggccgagttccaggcggcccgcgccggcgtccgcggcctcgtcgagtccggcatcacc 128 |||||||||||||| ||| | ||||||||||||||||||||||||||||| ||| |||| Sbjct: 19504435 ctggccgagttccacgcgtcgcgcgccggcgtccgcggcctcgtcgagtctggcgccacc 19504376 Query: 129 tccgtgccgccgctcttcctc 149 ||||||| |||||||||||| Sbjct: 19504375 gccgtgccaccgctcttcctc 19504355 Score = 89.7 bits (45), Expect = 3e-14 Identities = 93/109 (85%) Strand = Plus / Minus Query: 215 cttcaccatcccaagcgttgacctcgcactcccgctctcatccaccctgccgctcatccg 274 |||| ||||||| | |||||||||| | ||||||| ||| ||||| | |||||| |||| Sbjct: 19504298 cttcgccatcccgaccgttgacctctccctcccgcgctcggccaccgtcccgctcgtccg 19504239 Query: 275 cgccgccgcacgctcgtgcggcttcttccacgtaaccaaccacggcgtc 323 ||||||||| ||||||||||||||||||||| |||| |||||||||| Sbjct: 19504238 cgccgccgcgacctcgtgcggcttcttccacgtcaccagccacggcgtc 19504190 Score = 87.7 bits (44), Expect = 1e-13 Identities = 116/140 (82%) Strand = Plus / Minus Query: 895 tggtttcaaatgatgagtacgagagcgtggagcacagggtggtgatcaagtcctgtcaag 954 ||||||| || || |||||| ||||||||||||||||||||||||||||||| | |||| Sbjct: 19501902 tggtttcgaacgaggagtacaagagcgtggagcacagggtggtgatcaagtctagccaag 19501843 Query: 955 atgcgagggtgtccattgcactcttctttaatccctccaagcgccgggaatccgacttgt 1014 | || ||||| |||||||| ||||||| || || |||||||| | |||||| ||| Sbjct: 19501842 acgccagggtctccattgctgtcttcttcaacccagccaagcgcgatgcctccgacctgt 19501783 Query: 1015 ttgggccgctcccggagctc 1034 | ||||| |||||||||||| Sbjct: 19501782 tcgggcccctcccggagctc 19501763 Score = 73.8 bits (37), Expect = 1e-09 Identities = 52/57 (91%) Strand = Plus / Minus Query: 598 tgacggagctcgggaagaagatggcggggctgctgtcggaggcgctcggcgtcggcg 654 |||||| | |||||||| ||||||| ||||||||||||||||||||||||| ||||| Sbjct: 19503885 tgacggtgttcgggaaggagatggccgggctgctgtcggaggcgctcggcggcggcg 19503829 Score = 46.1 bits (23), Expect = 0.34 Identities = 53/63 (84%) Strand = Plus / Minus Query: 833 gtgggccgacgtgctgccggtgcccggcgcacttctgctcaacatcggggatgtgctcaa 892 ||||| ||||||| |||||| |||||||||| || ||||| ||||||| |||||||| Sbjct: 19503608 gtgggtcgacgtggcgccggtcgccggcgcactggtggtcaacgtcggggacgtgctcaa 19503549 Query: 893 ggt 895 ||| Sbjct: 19503548 ggt 19503546 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Minus Query: 430 cctactccaccatccccatccag 452 ||||||||||||||||||||||| Sbjct: 19504083 cctactccaccatccccatccag 19504061 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 ctcatccgcgccgccgcacgc 287 ||||||||||||||||||||| Sbjct: 11264489 ctcatccgcgccgccgcacgc 11264469 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 644 cggcgtcggcgcggagcggctggag 668 ||||| ||||||||||||||||||| Sbjct: 16343867 cggcgacggcgcggagcggctggag 16343891 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 38376516 gtgcaactactacccgccatgcccggagccggagcgg 38376552
>dbj|AP003449.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086A10 Length = 151071 Score = 220 bits (111), Expect = 1e-53 Identities = 156/171 (91%) Strand = Plus / Minus Query: 644 cggcgtcggcgcggagcggctggagagggcgatgcgggtggaaggcttgctgatggcgtg 703 ||||||||| ||||||||||||||| ||| ||||| |||||| || | |||||||||||| Sbjct: 112634 cggcgtcggggcggagcggctggagcgggagatgcaggtggaggggtggctgatggcgtg 112575 Query: 704 ccactattacccgccgtgcccggagccggcgcgggtggtcggcagcctggggcacacgga 763 |||||| |||||||||||||||||||||| |||||||||||||||||||| |||||| || Sbjct: 112574 ccactactacccgccgtgcccggagccggagcgggtggtcggcagcctggagcacaccga 112515 Query: 764 ccccagcctcttcaccgtcctggcgcaggacggggtcggagggctccaggt 814 |||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 112514 ccccagcctcttcaccgtcctggcgcaggacgccgtcggcgggctgcaggt 112464 Score = 97.6 bits (49), Expect = 1e-16 Identities = 73/81 (90%) Strand = Plus / Minus Query: 69 ctggccgagttccaggcggcccgcgccggcgtccgcggcctcgtcgagtccggcatcacc 128 |||||||||||||| ||| | ||||||||||||||||||||||||||||| ||| |||| Sbjct: 113251 ctggccgagttccacgcgtcgcgcgccggcgtccgcggcctcgtcgagtctggcgccacc 113192 Query: 129 tccgtgccgccgctcttcctc 149 ||||||| |||||||||||| Sbjct: 113191 gccgtgccaccgctcttcctc 113171 Score = 89.7 bits (45), Expect = 3e-14 Identities = 93/109 (85%) Strand = Plus / Minus Query: 215 cttcaccatcccaagcgttgacctcgcactcccgctctcatccaccctgccgctcatccg 274 |||| ||||||| | |||||||||| | ||||||| ||| ||||| | |||||| |||| Sbjct: 113114 cttcgccatcccgaccgttgacctctccctcccgcgctcggccaccgtcccgctcgtccg 113055 Query: 275 cgccgccgcacgctcgtgcggcttcttccacgtaaccaaccacggcgtc 323 ||||||||| ||||||||||||||||||||| |||| |||||||||| Sbjct: 113054 cgccgccgcgacctcgtgcggcttcttccacgtcaccagccacggcgtc 113006 Score = 87.7 bits (44), Expect = 1e-13 Identities = 116/140 (82%) Strand = Plus / Minus Query: 895 tggtttcaaatgatgagtacgagagcgtggagcacagggtggtgatcaagtcctgtcaag 954 ||||||| || || |||||| ||||||||||||||||||||||||||||||| | |||| Sbjct: 110718 tggtttcgaacgaggagtacaagagcgtggagcacagggtggtgatcaagtctagccaag 110659 Query: 955 atgcgagggtgtccattgcactcttctttaatccctccaagcgccgggaatccgacttgt 1014 | || ||||| |||||||| ||||||| || || |||||||| | |||||| ||| Sbjct: 110658 acgccagggtctccattgctgtcttcttcaacccagccaagcgcgatgcctccgacctgt 110599 Query: 1015 ttgggccgctcccggagctc 1034 | ||||| |||||||||||| Sbjct: 110598 tcgggcccctcccggagctc 110579 Score = 73.8 bits (37), Expect = 1e-09 Identities = 52/57 (91%) Strand = Plus / Minus Query: 598 tgacggagctcgggaagaagatggcggggctgctgtcggaggcgctcggcgtcggcg 654 |||||| | |||||||| ||||||| ||||||||||||||||||||||||| ||||| Sbjct: 112701 tgacggtgttcgggaaggagatggccgggctgctgtcggaggcgctcggcggcggcg 112645 Score = 46.1 bits (23), Expect = 0.34 Identities = 53/63 (84%) Strand = Plus / Minus Query: 833 gtgggccgacgtgctgccggtgcccggcgcacttctgctcaacatcggggatgtgctcaa 892 ||||| ||||||| |||||| |||||||||| || ||||| ||||||| |||||||| Sbjct: 112424 gtgggtcgacgtggcgccggtcgccggcgcactggtggtcaacgtcggggacgtgctcaa 112365 Query: 893 ggt 895 ||| Sbjct: 112364 ggt 112362 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Minus Query: 430 cctactccaccatccccatccag 452 ||||||||||||||||||||||| Sbjct: 112899 cctactccaccatccccatccag 112877
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 75.8 bits (38), Expect = 4e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 230 cgttgacctcgcactcccgctctcatccaccctgccgctcatccgcgccgccgcacgctc 289 |||||| ||| | ||||||| ||| ||||| | |||||| ||||||||||||||||||| Sbjct: 135416 cgttgagctctccctcccgcgctcggccaccgtcccgctcgtccgcgccgccgcacgctc 135357 Query: 290 gtgcggcttcttccacgtaaccaaccacggcgtc 323 |||| ||||||| || || |||||||||| |||| Sbjct: 135356 gtgctgcttctttcatgtcaccaaccacgacgtc 135323
>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 Score = 75.8 bits (38), Expect = 4e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 230 cgttgacctcgcactcccgctctcatccaccctgccgctcatccgcgccgccgcacgctc 289 |||||| ||| | ||||||| ||| ||||| | |||||| ||||||||||||||||||| Sbjct: 11559 cgttgagctctccctcccgcgctcggccaccgtcccgctcgtccgcgccgccgcacgctc 11500 Query: 290 gtgcggcttcttccacgtaaccaaccacggcgtc 323 |||| ||||||| || || |||||||||| |||| Sbjct: 11499 gtgctgcttctttcatgtcaccaaccacgacgtc 11466
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 75.8 bits (38), Expect = 4e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 230 cgttgacctcgcactcccgctctcatccaccctgccgctcatccgcgccgccgcacgctc 289 |||||| ||| | ||||||| ||| ||||| | |||||| ||||||||||||||||||| Sbjct: 2359417 cgttgagctctccctcccgcgctcggccaccgtcccgctcgtccgcgccgccgcacgctc 2359358 Query: 290 gtgcggcttcttccacgtaaccaaccacggcgtc 323 |||| ||||||| || || |||||||||| |||| Sbjct: 2359357 gtgctgcttctttcatgtcaccaaccacgacgtc 2359324
>ref|NM_001063841.1| Oryza sativa (japonica cultivar-group) Os06g0255100 (Os06g0255100) mRNA, complete cds Length = 1385 Score = 58.0 bits (29), Expect = 9e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 94 ccggcgtccgcggcctcgtcgagtccggc 122 ||||||||||||||||||||||||||||| Sbjct: 161 ccggcgtccgcggcctcgtcgagtccggc 189 Score = 50.1 bits (25), Expect = 0.022 Identities = 52/61 (85%) Strand = Plus / Plus Query: 755 gcacacggaccccagcctcttcaccgtcctggcgcaggacggggtcggagggctccaggt 814 ||||||||||||| || | |||||||||| ||||||||||| ||||| || || ||||| Sbjct: 780 gcacacggaccccggcgtgctcaccgtcctcgcgcaggacggcgtcggtggcctgcaggt 839 Query: 815 g 815 | Sbjct: 840 g 840
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 58.0 bits (29), Expect = 9e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 94 ccggcgtccgcggcctcgtcgagtccggc 122 ||||||||||||||||||||||||||||| Sbjct: 8052488 ccggcgtccgcggcctcgtcgagtccggc 8052460 Score = 56.0 bits (28), Expect = 3e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 94 ccggcgtccgcggcctcgtcgagtccgg 121 |||||||||||||||||||||||||||| Sbjct: 8045795 ccggcgtccgcggcctcgtcgagtccgg 8045768 Score = 50.1 bits (25), Expect = 0.022 Identities = 52/61 (85%) Strand = Plus / Minus Query: 755 gcacacggaccccagcctcttcaccgtcctggcgcaggacggggtcggagggctccaggt 814 ||||||||||||| || | |||||||||| ||||||||||| ||||| || || ||||| Sbjct: 8051869 gcacacggaccccggcgtgctcaccgtcctcgcgcaggacggcgtcggtggcctgcaggt 8051810 Query: 815 g 815 | Sbjct: 8051809 g 8051809 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 cggcgtcgacgccgccgccgt 337 ||||||||||||||||||||| Sbjct: 29159462 cggcgtcgacgccgccgccgt 29159482
>dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0592E11 Length = 153734 Score = 58.0 bits (29), Expect = 9e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 94 ccggcgtccgcggcctcgtcgagtccggc 122 ||||||||||||||||||||||||||||| Sbjct: 76257 ccggcgtccgcggcctcgtcgagtccggc 76229 Score = 56.0 bits (28), Expect = 3e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 94 ccggcgtccgcggcctcgtcgagtccgg 121 |||||||||||||||||||||||||||| Sbjct: 69564 ccggcgtccgcggcctcgtcgagtccgg 69537 Score = 50.1 bits (25), Expect = 0.022 Identities = 52/61 (85%) Strand = Plus / Minus Query: 755 gcacacggaccccagcctcttcaccgtcctggcgcaggacggggtcggagggctccaggt 814 ||||||||||||| || | |||||||||| ||||||||||| ||||| || || ||||| Sbjct: 75638 gcacacggaccccggcgtgctcaccgtcctcgcgcaggacggcgtcggtggcctgcaggt 75579 Query: 815 g 815 | Sbjct: 75578 g 75578
>dbj|AK069993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039E01, full insert sequence Length = 1387 Score = 58.0 bits (29), Expect = 9e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 94 ccggcgtccgcggcctcgtcgagtccggc 122 ||||||||||||||||||||||||||||| Sbjct: 163 ccggcgtccgcggcctcgtcgagtccggc 191 Score = 50.1 bits (25), Expect = 0.022 Identities = 52/61 (85%) Strand = Plus / Plus Query: 755 gcacacggaccccagcctcttcaccgtcctggcgcaggacggggtcggagggctccaggt 814 ||||||||||||| || | |||||||||| ||||||||||| ||||| || || ||||| Sbjct: 782 gcacacggaccccggcgtgctcaccgtcctcgcgcaggacggcgtcggtggcctgcaggt 841 Query: 815 g 815 | Sbjct: 842 g 842
>ref|NM_001063840.1| Oryza sativa (japonica cultivar-group) Os06g0255000 (Os06g0255000) mRNA, complete cds Length = 1098 Score = 56.0 bits (28), Expect = 3e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 94 ccggcgtccgcggcctcgtcgagtccgg 121 |||||||||||||||||||||||||||| Sbjct: 74 ccggcgtccgcggcctcgtcgagtccgg 101
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 56.0 bits (28), Expect = 3e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 69 ctggccgagttccaggcggcccgcgccggcgtccgcggcctcgtcgagtccggcatcacc 128 |||||||||||||| ||| | | |||||| ||| |||||||||||||||| ||| |||| Sbjct: 11765551 ctggccgagttccacgcgtcgcccgccggtgtctgcggcctcgtcgagtctggcgccacc 11765492 Query: 129 tccgtgcc 136 ||||||| Sbjct: 11765491 gccgtgcc 11765484 Score = 50.1 bits (25), Expect = 0.022 Identities = 25/25 (100%) Strand = Plus / Plus Query: 427 tcacctactccaccatccccatcca 451 ||||||||||||||||||||||||| Sbjct: 11765354 tcacctactccaccatccccatcca 11765378 Score = 44.1 bits (22), Expect = 1.3 Identities = 49/58 (84%) Strand = Plus / Plus Query: 92 cgccggcgtccgcggcctcgtcgagtccggcatcacctccgtgccgccgctcttcctc 149 |||||| ||||| |||||||| ||||| ||| |||| || |||| |||||||||||| Sbjct: 11765028 cgccggtgtccgtggcctcgttgagtctggcgccaccgccatgccaccgctcttcctc 11765085 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 711 tacccgccgtgcccggagccgg 732 |||||||||||||||||||||| Sbjct: 18485306 tacccgccgtgcccggagccgg 18485285
>dbj|AP005390.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0075O18 Length = 125411 Score = 56.0 bits (28), Expect = 3e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 69 ctggccgagttccaggcggcccgcgccggcgtccgcggcctcgtcgagtccggcatcacc 128 |||||||||||||| ||| | | |||||| ||| |||||||||||||||| ||| |||| Sbjct: 95251 ctggccgagttccacgcgtcgcccgccggtgtctgcggcctcgtcgagtctggcgccacc 95192 Query: 129 tccgtgcc 136 ||||||| Sbjct: 95191 gccgtgcc 95184 Score = 50.1 bits (25), Expect = 0.022 Identities = 25/25 (100%) Strand = Plus / Plus Query: 427 tcacctactccaccatccccatcca 451 ||||||||||||||||||||||||| Sbjct: 95054 tcacctactccaccatccccatcca 95078 Score = 44.1 bits (22), Expect = 1.3 Identities = 49/58 (84%) Strand = Plus / Plus Query: 92 cgccggcgtccgcggcctcgtcgagtccggcatcacctccgtgccgccgctcttcctc 149 |||||| ||||| |||||||| ||||| ||| |||| || |||| |||||||||||| Sbjct: 94728 cgccggtgtccgtggcctcgttgagtctggcgccaccgccatgccaccgctcttcctc 94785
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 56.0 bits (28), Expect = 3e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 94 ccggcgtccgcggcctcgtcgagtccgg 121 |||||||||||||||||||||||||||| Sbjct: 153313 ccggcgtccgcggcctcgtcgagtccgg 153286
>dbj|AP003918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_A03 Length = 168689 Score = 56.0 bits (28), Expect = 3e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 69 ctggccgagttccaggcggcccgcgccggcgtccgcggcctcgtcgagtccggcatcacc 128 |||||||||||||| ||| | | |||||| ||| |||||||||||||||| ||| |||| Sbjct: 43836 ctggccgagttccacgcgtcgcccgccggtgtctgcggcctcgtcgagtctggcgccacc 43777 Query: 129 tccgtgcc 136 ||||||| Sbjct: 43776 gccgtgcc 43769 Score = 50.1 bits (25), Expect = 0.022 Identities = 25/25 (100%) Strand = Plus / Plus Query: 427 tcacctactccaccatccccatcca 451 ||||||||||||||||||||||||| Sbjct: 43639 tcacctactccaccatccccatcca 43663 Score = 44.1 bits (22), Expect = 1.3 Identities = 49/58 (84%) Strand = Plus / Plus Query: 92 cgccggcgtccgcggcctcgtcgagtccggcatcacctccgtgccgccgctcttcctc 149 |||||| ||||| |||||||| ||||| ||| |||| || |||| |||||||||||| Sbjct: 43313 cgccggtgtccgtggcctcgttgagtctggcgccaccgccatgccaccgctcttcctc 43370
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 50.1 bits (25), Expect = 0.022 Identities = 25/25 (100%) Strand = Plus / Plus Query: 569 ggacgcgctggtcaggtaccagctg 593 ||||||||||||||||||||||||| Sbjct: 902190 ggacgcgctggtcaggtaccagctg 902214
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 48.1 bits (24), Expect = 0.085 Identities = 27/28 (96%) Strand = Plus / Minus Query: 53 cgacgccgcggtcgcgctggccgagttc 80 ||||||||||| |||||||||||||||| Sbjct: 4375811 cgacgccgcggccgcgctggccgagttc 4375784
>ref|NM_001062119.1| Oryza sativa (japonica cultivar-group) Os05g0421900 (Os05g0421900) mRNA, complete cds Length = 1332 Score = 48.1 bits (24), Expect = 0.085 Identities = 30/32 (93%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccgg 732 |||| |||| |||||||||||||||||||||| Sbjct: 717 gtgcaactactacccgccgtgcccggagccgg 748
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 48.1 bits (24), Expect = 0.085 Identities = 33/36 (91%) Strand = Plus / Plus Query: 783 ctggcgcaggacggggtcggagggctccaggtgcgc 818 |||||||||||||| ||||| ||||| ||||||||| Sbjct: 2824526 ctggcgcaggacggtgtcggcgggcttcaggtgcgc 2824561
>ref|XM_589971.2| PREDICTED: Bos taurus similar to zinc fingers and homeoboxes 3 (LOC512451), mRNA Length = 3215 Score = 48.1 bits (24), Expect = 0.085 Identities = 24/24 (100%) Strand = Plus / Plus Query: 166 ccagcagcccctccccaccgccag 189 |||||||||||||||||||||||| Sbjct: 843 ccagcagcccctccccaccgccag 866
>gb|AC146189.3| Pan troglodytes BAC clone CH251-490L21 from Y, complete sequence Length = 180597 Score = 48.1 bits (24), Expect = 0.085 Identities = 27/28 (96%) Strand = Plus / Minus Query: 760 cggaccccagcctcttcaccgtcctggc 787 ||||||||||||||||||| |||||||| Sbjct: 104544 cggaccccagcctcttcacggtcctggc 104517
>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092E21, complete sequence Length = 132649 Score = 48.1 bits (24), Expect = 0.085 Identities = 30/32 (93%) Strand = Plus / Minus Query: 701 gtgccactattacccgccgtgcccggagccgg 732 |||| |||| |||||||||||||||||||||| Sbjct: 90101 gtgcaactactacccgccgtgcccggagccgg 90070
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 48.1 bits (24), Expect = 0.085 Identities = 30/32 (93%) Strand = Plus / Minus Query: 701 gtgccactattacccgccgtgcccggagccgg 732 |||| |||| |||||||||||||||||||||| Sbjct: 20546622 gtgcaactactacccgccgtgcccggagccgg 20546591
>dbj|BS000612.1| Pan troglodytes chromosome Y clone:PTBY-009O17, complete sequences Length = 80000 Score = 48.1 bits (24), Expect = 0.085 Identities = 27/28 (96%) Strand = Plus / Plus Query: 760 cggaccccagcctcttcaccgtcctggc 787 ||||||||||||||||||| |||||||| Sbjct: 79027 cggaccccagcctcttcacggtcctggc 79054
>dbj|BS000556.1| Pan troglodytes chromosome Y clone:PTB-461C11, complete sequences Length = 148964 Score = 48.1 bits (24), Expect = 0.085 Identities = 27/28 (96%) Strand = Plus / Plus Query: 760 cggaccccagcctcttcaccgtcctggc 787 ||||||||||||||||||| |||||||| Sbjct: 7812 cggaccccagcctcttcacggtcctggc 7839
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 48.1 bits (24), Expect = 0.085 Identities = 27/28 (96%) Strand = Plus / Minus Query: 53 cgacgccgcggtcgcgctggccgagttc 80 ||||||||||| |||||||||||||||| Sbjct: 3770009 cgacgccgcggccgcgctggccgagttc 3769982
>emb|CT835187.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA117H07, full insert sequence Length = 1303 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Plus Query: 706 actattacccgccgtgcccggagccgg 732 |||| |||||||||||||||||||||| Sbjct: 721 actactacccgccgtgcccggagccgg 747
>dbj|AK241192.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065121B03, full insert sequence Length = 4576 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Plus Query: 706 actattacccgccgtgcccggagccgg 732 |||| |||||||||||||||||||||| Sbjct: 709 actactacccgccgtgcccggagccgg 735
>ref|NM_001067009.1| Oryza sativa (japonica cultivar-group) Os07g0648000 (Os07g0648000) mRNA, complete cds Length = 2634 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 313 accacggcgtcgacgccgccgccgtcg 339 |||||| |||||||||||||||||||| Sbjct: 298 accacgtcgtcgacgccgccgccgtcg 272
>ref|NM_001057486.1| Oryza sativa (japonica cultivar-group) Os03g0690500 (Os03g0690500) mRNA, complete cds Length = 1320 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Plus Query: 706 actattacccgccgtgcccggagccgg 732 |||| |||||||||||||||||||||| Sbjct: 647 actactacccgccgtgcccggagccgg 673
>ref|XM_001209398.1| Aspergillus terreus NIH2624 conserved hypothetical protein (ATEG_10096) mRNA, complete cds Length = 585 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Plus Query: 317 cggcgtcgacgccgccgccgtcg 339 ||||||||||||||||||||||| Sbjct: 264 cggcgtcgacgccgccgccgtcg 286
>ref|NM_124510.1| Arabidopsis thaliana iron ion binding / isopenicillin-N synthase (AT5G51310) mRNA, complete cds Length = 1002 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Plus Query: 297 ttcttccacgtaaccaaccacggcgtc 323 |||||| |||||||||||||||||||| Sbjct: 91 ttcttctacgtaaccaaccacggcgtc 117
>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete sequence Length = 150155 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Plus Query: 706 actattacccgccgtgcccggagccgg 732 |||| |||||||||||||||||||||| Sbjct: 14264 actactacccgccgtgcccggagccgg 14290
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Minus Query: 623 ggggctgctgtcggaggcgctcg 645 ||||||||||||||||||||||| Sbjct: 974988 ggggctgctgtcggaggcgctcg 974966 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 638 ggcgctcggcgtcggcgcgga 658 ||||||||||||||||||||| Sbjct: 1746122 ggcgctcggcgtcggcgcgga 1746102
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Plus Query: 313 accacggcgtcgacgccgccgccgtcg 339 |||||| |||||||||||||||||||| Sbjct: 27008407 accacgtcgtcgacgccgccgccgtcg 27008433 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 906 gatgagtacgagagcgtggagcacagggtg 935 |||| |||| |||||||||||||||||||| Sbjct: 218003 gatgtgtacaagagcgtggagcacagggtg 218032 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 294 ggcttcttccacgtaaccaaccacggcgt 322 ||||||||||| || |||||||||||||| Sbjct: 217418 ggcttcttccaggtgaccaaccacggcgt 217446
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 706 actattacccgccgtgcccggagccgg 732 |||| |||||||||||||||||||||| Sbjct: 27381454 actactacccgccgtgcccggagccgg 27381428
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Minus Query: 623 ggggctgctgtcggaggcgctcg 645 ||||||||||||||||||||||| Sbjct: 1841368 ggggctgctgtcggaggcgctcg 1841346 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 638 ggcgctcggcgtcggcgcgga 658 ||||||||||||||||||||| Sbjct: 2229642 ggcgctcggcgtcggcgcgga 2229622
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Minus Query: 623 ggggctgctgtcggaggcgctcg 645 ||||||||||||||||||||||| Sbjct: 2293697 ggggctgctgtcggaggcgctcg 2293675 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 638 ggcgctcggcgtcggcgcgga 658 ||||||||||||||||||||| Sbjct: 3081016 ggcgctcggcgtcggcgcgga 3080996
>gb|AC006209.25| Homo sapiens X BAC GS1-546D14 (Genome Systems Human Bac Library) complete sequence Length = 141759 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 761 ggaccccagcctcttcaccgtcctggc 787 |||||||||||||||||| |||||||| Sbjct: 81573 ggaccccagcctcttcacggtcctggc 81547
>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1316_A04 Length = 87144 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Plus Query: 313 accacggcgtcgacgccgccgccgtcg 339 |||||| |||||||||||||||||||| Sbjct: 72885 accacgtcgtcgacgccgccgccgtcg 72911
>gb|AF540907.1| Zea mays 2-oxoglutarate-dependent oxygenase (bx6) mRNA, complete cds Length = 1365 Score = 46.1 bits (23), Expect = 0.34 Identities = 29/31 (93%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccg 731 |||||| || ||||||||||||||||||||| Sbjct: 713 gtgccagtactacccgccgtgcccggagccg 743
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.34 Identities = 23/23 (100%) Strand = Plus / Minus Query: 314 ccacggcgtcgacgccgccgccg 336 ||||||||||||||||||||||| Sbjct: 5806113 ccacggcgtcgacgccgccgccg 5806091 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 cgcggtcgcgctggccgagttc 80 |||||||||||||||||||||| Sbjct: 5690768 cgcggtcgcgctggccgagttc 5690747 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 827 cgggcggtgggccgacgtgct 847 ||||||||||||||||||||| Sbjct: 3514946 cgggcggtgggccgacgtgct 3514926
>dbj|AB025621.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFG13 Length = 48008 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 297 ttcttccacgtaaccaaccacggcgtc 323 |||||| |||||||||||||||||||| Sbjct: 1211 ttcttctacgtaaccaaccacggcgtc 1185
>gb|BT024055.1| Zea mays clone EL01N0440A10 mRNA sequence Length = 1384 Score = 46.1 bits (23), Expect = 0.34 Identities = 29/31 (93%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccg 731 |||||| || ||||||||||||||||||||| Sbjct: 720 gtgccagtactacccgccgtgcccggagccg 750
>dbj|AP004272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0427D10 Length = 154192 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Plus Query: 313 accacggcgtcgacgccgccgccgtcg 339 |||||| |||||||||||||||||||| Sbjct: 11648 accacgtcgtcgacgccgccgccgtcg 11674
>dbj|AK111216.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-B05, full insert sequence Length = 2634 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 313 accacggcgtcgacgccgccgccgtcg 339 |||||| |||||||||||||||||||| Sbjct: 298 accacgtcgtcgacgccgccgccgtcg 272
>gb|AY104457.1| Zea mays PCO086194 mRNA sequence Length = 1459 Score = 46.1 bits (23), Expect = 0.34 Identities = 29/31 (93%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccg 731 |||||| || ||||||||||||||||||||| Sbjct: 733 gtgccagtactacccgccgtgcccggagccg 763
>gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, complete genome Length = 3483902 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 acgacgccgcggtcgcgctggccgag 77 ||||||||||| |||||||||||||| Sbjct: 3196963 acgacgccgcgatcgcgctggccgag 3196938
>ref|NM_001068258.1| Oryza sativa (japonica cultivar-group) Os08g0390200 (Os08g0390200) mRNA, complete cds Length = 1473 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 711 tacccgccgtgcccggagccgg 732 |||||||||||||||||||||| Sbjct: 714 tacccgccgtgcccggagccgg 735
>ref|NM_001065225.1| Oryza sativa (japonica cultivar-group) Os07g0103500 (Os07g0103500) mRNA, complete cds Length = 1729 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 906 gatgagtacgagagcgtggagcacagggtg 935 |||| |||| |||||||||||||||||||| Sbjct: 1189 gatgtgtacaagagcgtggagcacagggtg 1218 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 294 ggcttcttccacgtaaccaaccacggcgt 322 ||||||||||| || |||||||||||||| Sbjct: 604 ggcttcttccaggtgaccaaccacggcgt 632
>ref|NM_001065224.1| Oryza sativa (japonica cultivar-group) Os07g0103600 (Os07g0103600) mRNA, complete cds Length = 1077 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Minus Query: 906 gatgagtacgagagcgtggagcacagggtg 935 |||| |||| |||||||||||||||||||| Sbjct: 250 gatgtgtacaagagcgtggagcacagggtg 221 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 294 ggcttcttccacgtaaccaaccacggcgt 322 ||||||||||| || |||||||||||||| Sbjct: 835 ggcttcttccaggtgaccaaccacggcgt 807
>ref|NM_001054765.1| Oryza sativa (japonica cultivar-group) Os02g0767300 (Os02g0767300) mRNA, complete cds Length = 1221 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 711 tacccgccgtgcccggagccgg 732 |||||||||||||||||||||| Sbjct: 691 tacccgccgtgcccggagccgg 712
>gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete sequence Length = 3556545 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 635 ggaggcgctcggcgtcggcgcg 656 |||||||||||||||||||||| Sbjct: 2689960 ggaggcgctcggcgtcggcgcg 2689939 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 acgacgccgcggtcgcgctggccga 76 ||||||||||| ||||||||||||| Sbjct: 3246484 acgacgccgcgatcgcgctggccga 3246460
>ref|XM_001147323.1| PREDICTED: Pan troglodytes hypothetical protein LOC743448 (LOC743448), mRNA Length = 654 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 476 cgccggccctctccttccctgg 497 |||||||||||||||||||||| Sbjct: 606 cgccggccctctccttccctgg 627
>gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence Length = 3294563 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 52 acgacgccgcggtcgcgctggccgag 77 ||||||||||| |||||||||||||| Sbjct: 2513789 acgacgccgcgatcgcgctggccgag 2513764
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 711 tacccgccgtgcccggagccgg 732 |||||||||||||||||||||| Sbjct: 32329914 tacccgccgtgcccggagccgg 32329893 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 911 gtacgagagcgtggagcacagggtg 935 |||| |||||||||||||||||||| Sbjct: 25218469 gtacaagagcgtggagcacagggtg 25218445
>gb|DQ324114.1| Lolium temulentum gibberellin 2-oxidase mRNA, complete cds Length = 1023 Score = 44.1 bits (22), Expect = 1.3 Identities = 31/34 (91%) Strand = Plus / Plus Query: 804 gggctccaggtgcgcctccacgacgggcggtggg 837 |||||||||||| ||||||||||||||||||| Sbjct: 667 gggctccaggtggcgctccacgacgggcggtggg 700
>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0446F04 Length = 175390 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 906 gatgagtacgagagcgtggagcacagggtg 935 |||| |||| |||||||||||||||||||| Sbjct: 52867 gatgtgtacaagagcgtggagcacagggtg 52896 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 294 ggcttcttccacgtaaccaaccacggcgt 322 ||||||||||| || |||||||||||||| Sbjct: 52282 ggcttcttccaggtgaccaaccacggcgt 52310
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 711 tacccgccgtgcccggagccgg 732 |||||||||||||||||||||| Sbjct: 105746 tacccgccgtgcccggagccgg 105725
>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0671F11 Length = 159409 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 711 tacccgccgtgcccggagccgg 732 |||||||||||||||||||||| Sbjct: 67329 tacccgccgtgcccggagccgg 67308
>dbj|AK109056.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-E10, full insert sequence Length = 1076 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Minus Query: 906 gatgagtacgagagcgtggagcacagggtg 935 |||| |||| |||||||||||||||||||| Sbjct: 250 gatgtgtacaagagcgtggagcacagggtg 221 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 294 ggcttcttccacgtaaccaaccacggcgt 322 ||||||||||| || |||||||||||||| Sbjct: 834 ggcttcttccaggtgaccaaccacggcgt 806
>dbj|AK106859.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-C01, full insert sequence Length = 1729 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 906 gatgagtacgagagcgtggagcacagggtg 935 |||| |||| |||||||||||||||||||| Sbjct: 1189 gatgtgtacaagagcgtggagcacagggtg 1218 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 294 ggcttcttccacgtaaccaaccacggcgt 322 ||||||||||| || |||||||||||||| Sbjct: 604 ggcttcttccaggtgaccaaccacggcgt 632
>dbj|AK072697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136E04, full insert sequence Length = 1222 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 711 tacccgccgtgcccggagccgg 732 |||||||||||||||||||||| Sbjct: 692 tacccgccgtgcccggagccgg 713
>dbj|AK068286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K15, full insert sequence Length = 1478 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 711 tacccgccgtgcccggagccgg 732 |||||||||||||||||||||| Sbjct: 719 tacccgccgtgcccggagccgg 740
>gb|CP000482.1| Pelobacter propionicus DSM 2379, complete genome Length = 4008000 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 114 gagtccggcatcacctccgtgccgccgct 142 |||| |||| ||||||||||||||||||| Sbjct: 909272 gagtacggcctcacctccgtgccgccgct 909244
>emb|CT834906.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA116N24, full insert sequence Length = 1253 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 501 gtgcaactactacccgccatgcccggagccggagcgg 537
>emb|CR855053.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0101K10, complete sequence Length = 104269 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 ccggcgtccgcggcctcgtcg 114 ||||||||||||||||||||| Sbjct: 72677 ccggcgtccgcggcctcgtcg 72697
>gb|AC183599.3| Pan troglodytes BAC clone CH251-508H15 from chromosome 9, complete sequence Length = 232195 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 agcagcccctccccaccgcca 188 ||||||||||||||||||||| Sbjct: 98916 agcagcccctccccaccgcca 98936
>ref|NM_001065030.1| Oryza sativa (japonica cultivar-group) Os06g0703000 (Os06g0703000) mRNA, complete cds Length = 1487 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 cggcgtcgacgccgccgccgt 337 ||||||||||||||||||||| Sbjct: 1245 cggcgtcgacgccgccgccgt 1225
>ref|NM_001058715.1| Oryza sativa (japonica cultivar-group) Os04g0182200 (Os04g0182200) mRNA, complete cds Length = 1386 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 ccggcgtccgcggcctcgtcg 114 ||||||||||||||||||||| Sbjct: 95 ccggcgtccgcggcctcgtcg 115
>ref|NM_001051549.1| Oryza sativa (japonica cultivar-group) Os01g0883800 (Os01g0883800) mRNA, complete cds Length = 1170 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 690 gtgcaactactacccgccatgcccggagccggagcgg 726
>gb|CP000465.1| Roseobacter denitrificans strain OCh 114 plasmid pTB2, complete sequence Length = 69269 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 caggcggcccgcgccggcgtc 101 ||||||||||||||||||||| Sbjct: 54045 caggcggcccgcgccggcgtc 54025
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 91 gcgccggcgtccgcggcctcgtcgagtcc 119 |||||||| ||| |||||||||||||||| Sbjct: 2453823 gcgccggcctccacggcctcgtcgagtcc 2453851
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 acgacgccgcggtcgcgctggccga 76 ||||||||||| ||||||||||||| Sbjct: 3394092 acgacgccgcgatcgcgctggccga 3394068
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 636 gaggcgctcggcgtcggcgcg 656 ||||||||||||||||||||| Sbjct: 786632 gaggcgctcggcgtcggcgcg 786652 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 319 gcgtcgacgccgccgccgtcg 339 ||||||||||||||||||||| Sbjct: 3184021 gcgtcgacgccgccgccgtcg 3184041
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 636 gaggcgctcggcgtcggcgcg 656 ||||||||||||||||||||| Sbjct: 1306763 gaggcgctcggcgtcggcgcg 1306783 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 gcgtcgacgccgccgccgtcg 339 ||||||||||||||||||||| Sbjct: 1616815 gcgtcgacgccgccgccgtcg 1616795
>ref|XM_844086.1| PREDICTED: Canis familiaris similar to cAMP-dependent protein kinase type II-beta regulatory subunit, transcript variant 3 (LOC475887), mRNA Length = 1463 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 cgcgccggcgtccgcggcctc 110 ||||||||||||||||||||| Sbjct: 330 cgcgccggcgtccgcggcctc 310
>ref|XM_533095.2| PREDICTED: Canis familiaris similar to cAMP-dependent protein kinase type II-beta regulatory subunit, transcript variant 1 (LOC475887), mRNA Length = 1462 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 cgcgccggcgtccgcggcctc 110 ||||||||||||||||||||| Sbjct: 330 cgcgccggcgtccgcggcctc 310
>ref|XM_852770.1| PREDICTED: Canis familiaris similar to cAMP-dependent protein kinase type II-beta regulatory subunit, transcript variant 6 (LOC475887), mRNA Length = 1202 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 cgcgccggcgtccgcggcctc 110 ||||||||||||||||||||| Sbjct: 330 cgcgccggcgtccgcggcctc 310
>ref|XM_852692.1| PREDICTED: Canis familiaris similar to cAMP-dependent protein kinase type II-beta regulatory subunit, transcript variant 4 (LOC475887), mRNA Length = 1345 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 cgcgccggcgtccgcggcctc 110 ||||||||||||||||||||| Sbjct: 330 cgcgccggcgtccgcggcctc 310
>gb|AY115559.1| Oryza rufipogon putative gibberellin 20 oxidase gene, complete cds Length = 4361 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1696 gtgcaactactacccgccatgcccggagccggagcgg 1732
>gb|AY115558.1| Oryza sativa (indica cultivar-group) putative gibberellin 20 oxidase (GA20) gene, complete cds Length = 3981 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1313 gtgcaactactacccgccatgcccggagccggagcgg 1349
>dbj|AB213479.1| Oryza meridionalis OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: ME2 Length = 1474 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1360 gtgcaactactacccgccatgcccggagccggagcgg 1396
>dbj|AB213478.1| Oryza meridionalis OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: ME1 Length = 1474 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1360 gtgcaactactacccgccatgcccggagccggagcgg 1396
>dbj|AB213477.1| Oryza glumipatula OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: GLU Length = 1798 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1684 gtgcaactactacccgccatgcccggagccggagcgg 1720
>dbj|AB213476.1| Oryza glaberrima OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: GLA Length = 1790 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1676 gtgcaactactacccgccatgcccggagccggagcgg 1712
>dbj|AB213475.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R14 Length = 1809 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1695 gtgcaactactacccgccatgcccggagccggagcgg 1731
>dbj|AB213474.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R13 Length = 1808 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1694 gtgcaactactacccgccatgcccggagccggagcgg 1730
>dbj|AB213473.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R12 Length = 1813 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1699 gtgcaactactacccgccatgcccggagccggagcgg 1735
>dbj|AB213472.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R11 Length = 1807 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1693 gtgcaactactacccgccatgcccggagccggagcgg 1729
>dbj|AB213471.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R10 Length = 1798 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1684 gtgcaactactacccgccatgcccggagccggagcgg 1720
>dbj|AB213470.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R9 Length = 1800 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1686 gtgcaactactacccgccatgcccggagccggagcgg 1722
>dbj|AB213469.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R8 Length = 1813 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1699 gtgcaactactacccgccatgcccggagccggagcgg 1735
>dbj|AB213468.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R7 Length = 1793 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1679 gtgcaactactacccgccatgcccggagccggagcgg 1715
>dbj|AB213467.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R6 Length = 1731 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1617 gtgcaactactacccgccatgcccggagccggagcgg 1653
>dbj|AB213466.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R5 Length = 1725 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1611 gtgcaactactacccgccatgcccggagccggagcgg 1647
>dbj|AB213465.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R4 Length = 1738 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1624 gtgcaactactacccgccatgcccggagccggagcgg 1660
>dbj|AB213464.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R3 Length = 1737 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1623 gtgcaactactacccgccatgcccggagccggagcgg 1659
>dbj|AB213463.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R2 Length = 1807 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1693 gtgcaactactacccgccatgcccggagccggagcgg 1729
>dbj|AB213462.1| Oryza rufipogon OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: R1 Length = 1809 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1695 gtgcaactactacccgccatgcccggagccggagcgg 1731
>dbj|AB213461.1| Oryza sativa (indica cultivar-group) OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: RS1 Length = 1809 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1695 gtgcaactactacccgccatgcccggagccggagcgg 1731
>dbj|AB213460.1| Oryza sativa (indica cultivar-group) OsGA20ox2 gene for gibberellin-20 oxidase-2, partial cds, haplotype: S3 Length = 1808 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 1694 gtgcaactactacccgccatgcccggagccggagcgg 1730
>gb|AC165176.2| Zea mays clone ZMMBBb-177G21, complete sequence Length = 176679 Score = 42.1 bits (21), Expect = 5.3 Identities = 51/61 (83%) Strand = Plus / Plus Query: 755 gcacacggaccccagcctcttcaccgtcctggcgcaggacggggtcggagggctccaggt 814 ||||||||||||| || | ||||||| || ||||||||||| ||||| || || ||||| Sbjct: 95427 gcacacggaccccggcgtgctcaccgtgctcgcgcaggacggcgtcgggggcctgcaggt 95486 Query: 815 g 815 | Sbjct: 95487 g 95487
>gb|AY114310.1| Oryza sativa (indica cultivar-group) gibberellin 20-oxidase mRNA, complete cds Length = 1170 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 690 gtgcaactactacccgccatgcccggagccggagcgg 726
>gb|AE006013.1| Caulobacter crescentus CB15 section 339 of 359 of the complete genome Length = 13369 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 accacggcgtcgacgccgccg 333 ||||||||||||||||||||| Sbjct: 2149 accacggcgtcgacgccgccg 2169
>gb|AF465256.1| Oryza sativa cultivar Milyang 23 gibberellin-20 oxidase (Sd-1) gene, complete cds Length = 6237 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 2882 gtgcaactactacccgccatgcccggagccggagcgg 2918
>gb|AF465255.1| Oryza sativa cultivar Nipponbare gibberellin-20 oxidase (Sd-1) gene, complete cds Length = 6590 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 3221 gtgcaactactacccgccatgcccggagccggagcgg 3257
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 ccggcgtccgcggcctcgtcg 114 ||||||||||||||||||||| Sbjct: 5555349 ccggcgtccgcggcctcgtcg 5555369
>gb|AC009027.10| Homo sapiens chromosome 16 clone RP11-123C5, complete sequence Length = 178256 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 477 gccggccctctccttccctgg 497 ||||||||||||||||||||| Sbjct: 32810 gccggccctctccttccctgg 32830
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 636 gaggcgctcggcgtcggcgcg 656 ||||||||||||||||||||| Sbjct: 1210869 gaggcgctcggcgtcggcgcg 1210889 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 gcgtcgacgccgccgccgtcg 339 ||||||||||||||||||||| Sbjct: 1503957 gcgtcgacgccgccgccgtcg 1503937
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 137341 gtgcaactactacccgccatgcccggagccggagcgg 137377
>gb|AC009131.6|AC009131 Homo sapiens chromosome 16 clone RP11-502K10, complete sequence Length = 180835 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 477 gccggccctctccttccctgg 497 ||||||||||||||||||||| Sbjct: 117350 gccggccctctccttccctgg 117370
>gb|AF254556.1|AF254556 Oryza sativa gibberellin 20 oxidase (GA5) gene, partial sequence Length = 5575 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 2941 gtgcaactactacccgccatgcccggagccggagcgg 2977
>dbj|AP006237.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008D07 Length = 156874 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 644 cggcgtcggcgcggagcggctggag 668 ||||| ||||||||||||||||||| Sbjct: 105944 cggcgacggcgcggagcggctggag 105968
>dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1215_E11 Length = 105301 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 cggcgtcgacgccgccgccgt 337 ||||||||||||||||||||| Sbjct: 26749 cggcgtcgacgccgccgccgt 26769
>dbj|AP002871.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0475H04 Length = 143337 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 ctcatccgcgccgccgcacgc 287 ||||||||||||||||||||| Sbjct: 51894 ctcatccgcgccgccgcacgc 51874
>dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1469H02 Length = 136602 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 911 gtacgagagcgtggagcacagggtg 935 |||| |||||||||||||||||||| Sbjct: 118862 gtacaagagcgtggagcacagggtg 118838
>dbj|AK072944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150L12, full insert sequence Length = 1488 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 cggcgtcgacgccgccgccgt 337 ||||||||||||||||||||| Sbjct: 1246 cggcgtcgacgccgccgccgt 1226
>dbj|AK072410.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083A20, full insert sequence Length = 2655 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 911 gtacgagagcgtggagcacagggtg 935 |||| |||||||||||||||||||| Sbjct: 2184 gtacaagagcgtggagcacagggtg 2208
>dbj|AK067970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124E20, full insert sequence Length = 1387 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 ccggcgtccgcggcctcgtcg 114 ||||||||||||||||||||| Sbjct: 96 ccggcgtccgcggcctcgtcg 116
>dbj|AK059045.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-D08, full insert sequence Length = 1741 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 911 gtacgagagcgtggagcacagggtg 935 |||| |||||||||||||||||||| Sbjct: 965 gtacaagagcgtggagcacagggtg 989
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 823 acgacgggcggtgggccgacg 843 ||||||||||||||||||||| Sbjct: 2817822 acgacgggcggtgggccgacg 2817842
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 319 gcgtcgacgccgccgccgtcg 339 ||||||||||||||||||||| Sbjct: 3261482 gcgtcgacgccgccgccgtcg 3261502
>emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006L01, complete sequence Length = 162227 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 ccggcgtccgcggcctcgtcg 114 ||||||||||||||||||||| Sbjct: 12556 ccggcgtccgcggcctcgtcg 12576
>emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01, complete sequence Length = 150283 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 ccggcgtccgcggcctcgtcg 114 ||||||||||||||||||||| Sbjct: 109979 ccggcgtccgcggcctcgtcg 109999
>emb|AL807753.10| Mouse DNA sequence from clone RP23-359L15 on chromosome X, complete sequence Length = 189848 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 459 aaaagtaaaacgacctccgccggcc 483 |||||||||||||||||| |||||| Sbjct: 129641 aaaagtaaaacgacctcccccggcc 129665
>dbj|AB077025.1| Oryza sativa (japonica cultivar-group) mRNA for GA C20oxidase2, complete cds Length = 1170 Score = 42.1 bits (21), Expect = 5.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 701 gtgccactattacccgccgtgcccggagccggcgcgg 737 |||| |||| |||||||| ||||||||||||| |||| Sbjct: 690 gtgcaactactacccgccatgcccggagccggagcgg 726 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 202,690,492 Number of extensions: 11316826 Number of successful extensions: 285730 Number of sequences better than 10.0: 128 Number of HSP's gapped: 285726 Number of HSP's successfully gapped: 184 Length of query: 1382 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1359 Effective length of database: 18,503,978,556 Effective search space: 25146906857604 Effective search space used: 25146906857604 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
