| Clone Name | FLbaf67k17 |
|---|---|
| Clone Library Name | barley_pub |
>Q9NZW0:GOG8A_HUMAN Golgin subfamily A member 8A/B - Homo sapiens (Human)| Length = 460 Score = 34.7 bits (78), Expect = 1.6 Identities = 26/71 (36%), Positives = 28/71 (39%), Gaps = 4/71 (5%) Frame = +3 Query: 816 ARRGGGDREVGPVPGGRAAVHEEAPRAGGGVLR----GRVHGQLLPRQHGRADPAVPDGV 983 A GGG + GP GG E A AG GV HG+ L A P Sbjct: 324 ASPGGGHHQAGPGQGGEEG--EAAGAAGDGVAACGSYNEGHGKFLAAAQNPAAEPSPGAP 381 Query: 984 APQGRGAAADH 1016 APQ GAA H Sbjct: 382 APQELGAADKH 392
>P27884:CAC1A_RABIT Voltage-dependent P/Q-type calcium channel subunit alpha-1A -| Oryctolagus cuniculus (Rabbit) Length = 2424 Score = 34.3 bits (77), Expect = 2.1 Identities = 23/67 (34%), Positives = 30/67 (44%) Frame = +3 Query: 798 QGRLPPARRGGGDREVGPVPGGRAAVHEEAPRAGGGVLRGRVHGQLLPRQHGRADPAVPD 977 Q R P RRGGG R + PG R + +++P G V R P+ R P Sbjct: 2289 QRRRPRRRRGGGGRALRRAPGPREPLAQDSPGRGPSVCLARAARPAGPQ---RLLPGPRT 2345 Query: 978 GVAPQGR 998 G AP+ R Sbjct: 2346 GQAPRAR 2352
>Q5NDE7:AGO61_XENLA Uncharacterized glycosyltransferase AGO61 precursor - Xenopus laevis| (African clawed frog) Length = 578 Score = 34.3 bits (77), Expect = 2.1 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +1 Query: 1456 HGAGLTNQIFLPTQAVVLQIVPWG-NMDWMATNFYGQPAREMQLRYVEYYVDEEETSL 1626 HGA L +FLP AVV+++ P+G N + M+L+YV + EEE ++ Sbjct: 343 HGAQLVTSLFLPKGAVVVELFPYGINPEHYTPYKTLSTLPGMELQYVAWQNTEEENTI 400
>Q5NDE6:AGO61_XENTR Uncharacterized glycosyltransferase AGO61 precursor - Xenopus| tropicalis (Western clawed frog) (Silurana tropicalis) Length = 576 Score = 33.5 bits (75), Expect = 3.6 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +1 Query: 1456 HGAGLTNQIFLPTQAVVLQIVPWG-NMDWMATNFYGQPAREMQLRYVEYYVDEEETSL 1626 HGA L +FLP A+V+++ P+G N + M+L+YV + EEE ++ Sbjct: 343 HGAQLITSLFLPKGAIVVELFPYGVNPEHYTPYKTLSTLPGMELQYVAWQNTEEENTI 400
>P10569:MYSC_ACACA Myosin IC heavy chain - Acanthamoeba castellanii (Amoeba)| Length = 1168 Score = 32.7 bits (73), Expect = 6.2 Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Frame = +3 Query: 798 QGRLPPARRG--GGDREVGPVPGGRAAVHEEAPRAGGGVLRGRVHGQLLPRQHGRADPAV 971 +G PP G GG R P PGG P GG+ RG G + PR GRA P Sbjct: 1111 RGAPPPGAGGPPGGGRGGAPPPGGMRGRGGPGPAPPGGMARG---GMMPPR--GRAGPPP 1165 Query: 972 P 974 P Sbjct: 1166 P 1166 Score = 32.3 bits (72), Expect = 8.0 Identities = 28/78 (35%), Positives = 32/78 (41%), Gaps = 14/78 (17%) Frame = +3 Query: 813 PARRGGGDREVGPVPGGRAAVHEEAPRAGGGVLRGRV--------HGQLLPRQHGRADPA 968 PA G P PGG++ AP G G +RGR G P GRA P Sbjct: 1039 PAPGPSGGPRPAP-PGGKSG--RAAPMGGPGPMRGRGGPAPGGPGRGGAPPPGAGRAGPP 1095 Query: 969 ------VPDGVAPQGRGA 1004 P G AP+GRGA Sbjct: 1096 GGRGMPAPGGAAPRGRGA 1113 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 224,660,098 Number of extensions: 4142226 Number of successful extensions: 14733 Number of sequences better than 10.0: 5 Number of HSP's gapped: 14671 Number of HSP's successfully gapped: 6 Length of query: 702 Length of database: 100,686,439 Length adjustment: 120 Effective length of query: 582 Effective length of database: 67,771,039 Effective search space: 39442744698 Effective search space used: 39442744698 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)