ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf67k17 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT832587.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115M08, full insert sequence Length = 2051 Score = 1195 bits (603), Expect = 0.0 Identities = 1024/1163 (88%), Gaps = 1/1163 (0%) Strand = Plus / Plus Query: 629 tgcgacgagaatggcgtggacgaggggttcccctacgcgcggccgtcggtgtgcgagctc 688 ||||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 628 tgcgacgagaacggcgtggacgagggcttcccgtacgcgcggccgtcggtttgcgagctg 687 Query: 689 tccggcgacatccggatcagccc-aagcagaagaccatgtacctggtgaacccgtcgggc 747 | ||||||| |||| ||||||| |||||||||||||| ||| | ||||||||||||||| Sbjct: 688 tacggcgacgtccgcgtcagccccaagcagaagaccatttacgtcgtgaacccgtcgggc 747 Query: 748 gccggtggcttcgacgagaacggcgagaagcggctccggccgtacgcccgcaaggacgac 807 ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 748 gccggcggcttcgacgagaacggcgagaagcggctccggccctacgcccgcaaggacgat 807 Query: 808 ttcctcctgcccgccgtggtggaggtgaccgtgaagtcggtcccgtccccggcggccgcg 867 |||||||| || | ||||||||||||||| | ||||| || || ||| |||||| || Sbjct: 808 ttcctcctcccgggcgtggtggaggtgactatcaagtccgtgccctccgaggcggcggcc 867 Query: 868 ccgcagtgcacgaagaagcaccgcgtgccggcggtggtgttctccgtggccgggtacacg 927 || ||||||||||| ||||| ||| || || ||||||||||||||||||||||||||| Sbjct: 868 cccaagtgcacgaagcagcacgccgtccccgccgtggtgttctccgtggccgggtacacg 927 Query: 928 gacaacttcttccacgacaacacggacgcgctgatcccgctgttcctgacggcgtcgcac 987 ||||||||||||||||||| || || || |||||||||| ||||||||| || ||||| Sbjct: 928 gacaacttcttccacgacatgaccgatgccatgatcccgctattcctgacgacggcgcac 987 Query: 988 ctcaagggcgaggtgcagctgctgatcaccaactacaagccgtggtgggtgcagaagtac 1047 |||||||||||||| ||| | || ||||||||||||| |||||||||||||||||||||| Sbjct: 988 ctcaagggcgaggtccagatcctcatcaccaactacaggccgtggtgggtgcagaagtac 1047 Query: 1048 acgccggtgctgcgcaagctgtccaactacgaccccatcaacttcgacgccgacgccggg 1107 |||||| |||| ||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 1048 acgccgctgctccgcaagctgtccaactacgacgtcatcaacttcgacgaggacgccggc 1107 Query: 1108 gtgcactgcttctcggcggggtacctgggcctgtaccgggaccgggacctcatcatctcg 1167 |||||||||||| || ||||||||| || |||||||| ||||| |||||||||||||| Sbjct: 1108 gtgcactgcttcccgcaggggtacctcggtctgtaccgcgaccgcgacctcatcatctcc 1167 Query: 1168 ccgcacccgacccggaacccgcgcaactacaccatggtggactacaaccggttcatccgg 1227 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 1168 ccgcacccgacccgcaacccgcgcaactacaccatggtggactacaaccgcttcctccgc 1227 Query: 1228 tcggcgtacgcgctccggcgcgaccagccgtcggtgctcggggaggtccccgggatgcgc 1287 || | |||||||||||||| ||||||||||| || |||| ||||||||||| Sbjct: 1228 gacgctctggagctccggcgcgaccgcccgtcggtgctgggcgaggagcccgggatgcgg 1287 Query: 1288 ccccagatgctgatcatctcccgcggcggcacgcggaagctgctgaacctggaggaggtg 1347 || | |||||||||||||||||||| ||||||||| |||||||||||||| ||||||||| Sbjct: 1288 ccgcggatgctgatcatctcccgcgccggcacgcgcaagctgctgaacctcgaggaggtg 1347 Query: 1348 gcggccgccgcggaggagctcgggttcaacgtgacggtggcggaggcgggggcggacgtg 1407 || || |||||| |||||| || ||||||||||||||||||||||| || || |||||| Sbjct: 1348 gccgcggccgcgacggagcttggtttcaacgtgacggtggcggaggccggtgctgacgtg 1407 Query: 1408 ccggcgttcgcggcgctggtgaacgcggcggacgtgctgctggcggtgcacggcgccggg 1467 || ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 1408 cccgcgttcgcggcgctggtgaactcggcggacgtgctgctggccgtgcacggcgccggg 1467 Query: 1468 ctgacgaaccagatcttcctgccgacgcaggcagtggtgctgcagatcgtgccgtggggg 1527 |||||||||||||||||||| ||| || |||| |||||| |||||||||||||||||||| Sbjct: 1468 ctgacgaaccagatcttcctcccggcggaggccgtggtggtgcagatcgtgccgtggggg 1527 Query: 1528 aacatggactggatggcgaccaacttctacgggcagccggcgcgggagatgcagctccgg 1587 |||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||| Sbjct: 1528 aacatggactggatggcgaccaacttttacgggcagccggcgagggacatgcagctccgg 1587 Query: 1588 tacgtggagtactacgtggacgaggaggagacgagcctcaaggacaagtactcgagggat 1647 ||||||||||||||||| | |||||||||||||||||| ||| |||| |||||| | ||| Sbjct: 1588 tacgtggagtactacgtcggcgaggaggagacgagcctgaagcacaactactcgcgagat 1647 Query: 1648 cacgtggtgttcagggaccccaaggcgttgcacaagcaggggtggcaggcgctcgccgag 1707 ||| ||||||||| ||||||||||||| | ||| |||||| |||||| | ||||||| | Sbjct: 1648 cacatggtgttcaaggaccccaaggcgctccacgcgcagggatggcagacactcgccgcg 1707 Query: 1708 accatcatgaagcaggacgtgaaggtgaacctcgccaggttccggcccttcctgctccag 1767 || ||||||||||||||||| |||| |||||| ||||||||||||| ||||||| ||| Sbjct: 1708 actatcatgaagcaggacgtcgaggtcaacctcaccaggttccggccaatcctgctgcag 1767 Query: 1768 gccatcgacaagctgcaggagta 1790 || |||||| ||||||| |||| Sbjct: 1768 gcgctcgacaggctgcagcagta 1790 Score = 200 bits (101), Expect = 1e-47 Identities = 134/145 (92%) Strand = Plus / Plus Query: 173 aggggcttcgcctccaagatcgagcccaagaagctcggcgccggcctcctcgccggctgc 232 |||||| || || ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 175 aggggcctcaccaccaagatcgagcccaagaagctcggcgtcggcctcctcgccggctgc 234 Query: 233 tgcctcgcgctcctcacctacgtctccctcgccaagctcttcgccatctactcccccgtc 292 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| || Sbjct: 235 tgcctcgcgctcctcacctacgtctcccttgccaagctcttcgcaatctactcccctgtg 294 Query: 293 ttcgctagcacggccaacacgtccg 317 ||||| ||||| |||||||| |||| Sbjct: 295 ttcgccagcacagccaacacatccg 319 Score = 63.9 bits (32), Expect = 2e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 104 tcgacggcgtactcgcggccgtccaagctgccgggcggcg 143 |||||||||||||| |||||||| |||||||||||||||| Sbjct: 97 tcgacggcgtactcccggccgtcgaagctgccgggcggcg 136
>ref|NM_001053253.1| Oryza sativa (japonica cultivar-group) Os02g0329800 (Os02g0329800) mRNA, complete cds Length = 2112 Score = 1195 bits (603), Expect = 0.0 Identities = 1024/1163 (88%), Gaps = 1/1163 (0%) Strand = Plus / Plus Query: 629 tgcgacgagaatggcgtggacgaggggttcccctacgcgcggccgtcggtgtgcgagctc 688 ||||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 628 tgcgacgagaacggcgtggacgagggcttcccgtacgcgcggccgtcggtttgcgagctg 687 Query: 689 tccggcgacatccggatcagccc-aagcagaagaccatgtacctggtgaacccgtcgggc 747 | ||||||| |||| ||||||| |||||||||||||| ||| | ||||||||||||||| Sbjct: 688 tacggcgacgtccgcgtcagccccaagcagaagaccatttacgtcgtgaacccgtcgggc 747 Query: 748 gccggtggcttcgacgagaacggcgagaagcggctccggccgtacgcccgcaaggacgac 807 ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 748 gccggcggcttcgacgagaacggcgagaagcggctccggccctacgcccgcaaggacgat 807 Query: 808 ttcctcctgcccgccgtggtggaggtgaccgtgaagtcggtcccgtccccggcggccgcg 867 |||||||| || | ||||||||||||||| | ||||| || || ||| |||||| || Sbjct: 808 ttcctcctcccgggcgtggtggaggtgactatcaagtccgtgccctccgaggcggcggcc 867 Query: 868 ccgcagtgcacgaagaagcaccgcgtgccggcggtggtgttctccgtggccgggtacacg 927 || ||||||||||| ||||| ||| || || ||||||||||||||||||||||||||| Sbjct: 868 cccaagtgcacgaagcagcacgccgtccccgccgtggtgttctccgtggccgggtacacg 927 Query: 928 gacaacttcttccacgacaacacggacgcgctgatcccgctgttcctgacggcgtcgcac 987 ||||||||||||||||||| || || || |||||||||| ||||||||| || ||||| Sbjct: 928 gacaacttcttccacgacatgaccgatgccatgatcccgctattcctgacgacggcgcac 987 Query: 988 ctcaagggcgaggtgcagctgctgatcaccaactacaagccgtggtgggtgcagaagtac 1047 |||||||||||||| ||| | || |||||||||||||||||||||||||||||||||||| Sbjct: 988 ctcaagggcgaggtccagatcctcatcaccaactacaagccgtggtgggtgcagaagtac 1047 Query: 1048 acgccggtgctgcgcaagctgtccaactacgaccccatcaacttcgacgccgacgccggg 1107 |||||| |||| ||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 1048 acgccgctgctccgcaagctgtccaactacgacgtcatcaacttcgacgaggacgccggc 1107 Query: 1108 gtgcactgcttctcggcggggtacctgggcctgtaccgggaccgggacctcatcatctcg 1167 |||||||||||| || ||||||||| || |||||||| ||||| |||||||||||||| Sbjct: 1108 gtgcactgcttcccgcaggggtacctcggtctgtaccgcgaccgcgacctcatcatctcc 1167 Query: 1168 ccgcacccgacccggaacccgcgcaactacaccatggtggactacaaccggttcatccgg 1227 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 1168 ccgcacccgacccgcaacccgcgcaactacaccatggtggactacaaccgcttcctccgc 1227 Query: 1228 tcggcgtacgcgctccggcgcgaccagccgtcggtgctcggggaggtccccgggatgcgc 1287 || | |||||||||||||| ||||||||||| || |||| ||||||||||| Sbjct: 1228 gacgctctggagctccggcgcgaccgcccgtcggtgctgggcgaggagcccgggatgcgg 1287 Query: 1288 ccccagatgctgatcatctcccgcggcggcacgcggaagctgctgaacctggaggaggtg 1347 || | |||||||||||||||||||| ||||||||| |||||||||||||| ||||||||| Sbjct: 1288 ccgcggatgctgatcatctcccgcgccggcacgcgcaagctgctgaacctcgaggaggtg 1347 Query: 1348 gcggccgccgcggaggagctcgggttcaacgtgacggtggcggaggcgggggcggacgtg 1407 || || |||||| |||||| || ||||||||||||||||||||||| || || |||||| Sbjct: 1348 gccgcggccgcgacggagcttggtttcaacgtgacggtggcggaggccggtgctgacgtg 1407 Query: 1408 ccggcgttcgcggcgctggtgaacgcggcggacgtgctgctggcggtgcacggcgccggg 1467 || ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 1408 cccgcgttcgcggcgctggtgaactcggcggacgtgctgctggccgtgcacggcgccggg 1467 Query: 1468 ctgacgaaccagatcttcctgccgacgcaggcagtggtgctgcagatcgtgccgtggggg 1527 |||||||||||||||||||| ||| || |||| |||||| |||||||||||||||||||| Sbjct: 1468 ctgacgaaccagatcttcctcccggcggaggccgtggtggtgcagatcgtgccgtggggg 1527 Query: 1528 aacatggactggatggcgaccaacttctacgggcagccggcgcgggagatgcagctccgg 1587 |||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||| Sbjct: 1528 aacatggactggatggcgaccaacttttacgggcagccggcgagggacatgcagctccgg 1587 Query: 1588 tacgtggagtactacgtggacgaggaggagacgagcctcaaggacaagtactcgagggat 1647 ||||||||||||||||| | |||||||||||||||||| ||| |||| |||||| | ||| Sbjct: 1588 tacgtggagtactacgtcggcgaggaggagacgagcctgaagcacaactactcgcgagat 1647 Query: 1648 cacgtggtgttcagggaccccaaggcgttgcacaagcaggggtggcaggcgctcgccgag 1707 ||| ||||||||| ||||||||||||| | ||| ||||| |||||| | ||||||| | Sbjct: 1648 cacatggtgttcaaggaccccaaggcgctccacgcacagggatggcagacactcgccgcg 1707 Query: 1708 accatcatgaagcaggacgtgaaggtgaacctcgccaggttccggcccttcctgctccag 1767 || ||||||||||||||||| |||| |||||| ||||||||||||| ||||||| ||| Sbjct: 1708 actatcatgaagcaggacgtcgaggtcaacctcaccaggttccggccaatcctgctgcag 1767 Query: 1768 gccatcgacaagctgcaggagta 1790 || |||||| ||||||| |||| Sbjct: 1768 gcgctcgacaggctgcagcagta 1790 Score = 200 bits (101), Expect = 1e-47 Identities = 134/145 (92%) Strand = Plus / Plus Query: 173 aggggcttcgcctccaagatcgagcccaagaagctcggcgccggcctcctcgccggctgc 232 |||||| || || ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 175 aggggcctcaccaccaagatcgagcccaagaagctcggcgtcggcctcctcgccggctgc 234 Query: 233 tgcctcgcgctcctcacctacgtctccctcgccaagctcttcgccatctactcccccgtc 292 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| || Sbjct: 235 tgcctcgcgctcctcacctacgtctcccttgccaagctcttcgcaatctactcccctgtg 294 Query: 293 ttcgctagcacggccaacacgtccg 317 ||||| ||||| |||||||| |||| Sbjct: 295 ttcgccagcacagccaacacatccg 319 Score = 63.9 bits (32), Expect = 2e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 104 tcgacggcgtactcgcggccgtccaagctgccgggcggcg 143 |||||||||||||| |||||||| |||||||||||||||| Sbjct: 97 tcgacggcgtactcccggccgtcgaagctgccgggcggcg 136
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 1195 bits (603), Expect = 0.0 Identities = 1024/1163 (88%), Gaps = 1/1163 (0%) Strand = Plus / Plus Query: 629 tgcgacgagaatggcgtggacgaggggttcccctacgcgcggccgtcggtgtgcgagctc 688 ||||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 13368032 tgcgacgagaacggcgtggacgagggcttcccgtacgcgcggccgtcggtttgcgagctg 13368091 Query: 689 tccggcgacatccggatcagccc-aagcagaagaccatgtacctggtgaacccgtcgggc 747 | ||||||| |||| ||||||| |||||||||||||| ||| | ||||||||||||||| Sbjct: 13368092 tacggcgacgtccgcgtcagccccaagcagaagaccatttacgtcgtgaacccgtcgggc 13368151 Query: 748 gccggtggcttcgacgagaacggcgagaagcggctccggccgtacgcccgcaaggacgac 807 ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 13368152 gccggcggcttcgacgagaacggcgagaagcggctccggccctacgcccgcaaggacgat 13368211 Query: 808 ttcctcctgcccgccgtggtggaggtgaccgtgaagtcggtcccgtccccggcggccgcg 867 |||||||| || | ||||||||||||||| | ||||| || || ||| |||||| || Sbjct: 13368212 ttcctcctcccgggcgtggtggaggtgactatcaagtccgtgccctccgaggcggcggcc 13368271 Query: 868 ccgcagtgcacgaagaagcaccgcgtgccggcggtggtgttctccgtggccgggtacacg 927 || ||||||||||| ||||| ||| || || ||||||||||||||||||||||||||| Sbjct: 13368272 cccaagtgcacgaagcagcacgccgtccccgccgtggtgttctccgtggccgggtacacg 13368331 Query: 928 gacaacttcttccacgacaacacggacgcgctgatcccgctgttcctgacggcgtcgcac 987 ||||||||||||||||||| || || || |||||||||| ||||||||| || ||||| Sbjct: 13368332 gacaacttcttccacgacatgaccgatgccatgatcccgctattcctgacgacggcgcac 13368391 Query: 988 ctcaagggcgaggtgcagctgctgatcaccaactacaagccgtggtgggtgcagaagtac 1047 |||||||||||||| ||| | || |||||||||||||||||||||||||||||||||||| Sbjct: 13368392 ctcaagggcgaggtccagatcctcatcaccaactacaagccgtggtgggtgcagaagtac 13368451 Query: 1048 acgccggtgctgcgcaagctgtccaactacgaccccatcaacttcgacgccgacgccggg 1107 |||||| |||| ||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 13368452 acgccgctgctccgcaagctgtccaactacgacgtcatcaacttcgacgaggacgccggc 13368511 Query: 1108 gtgcactgcttctcggcggggtacctgggcctgtaccgggaccgggacctcatcatctcg 1167 |||||||||||| || ||||||||| || |||||||| ||||| |||||||||||||| Sbjct: 13368512 gtgcactgcttcccgcaggggtacctcggtctgtaccgcgaccgcgacctcatcatctcc 13368571 Query: 1168 ccgcacccgacccggaacccgcgcaactacaccatggtggactacaaccggttcatccgg 1227 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 13368572 ccgcacccgacccgcaacccgcgcaactacaccatggtggactacaaccgcttcctccgc 13368631 Query: 1228 tcggcgtacgcgctccggcgcgaccagccgtcggtgctcggggaggtccccgggatgcgc 1287 || | |||||||||||||| ||||||||||| || |||| ||||||||||| Sbjct: 13368632 gacgctctggagctccggcgcgaccgcccgtcggtgctgggcgaggagcccgggatgcgg 13368691 Query: 1288 ccccagatgctgatcatctcccgcggcggcacgcggaagctgctgaacctggaggaggtg 1347 || | |||||||||||||||||||| ||||||||| |||||||||||||| ||||||||| Sbjct: 13368692 ccgcggatgctgatcatctcccgcgccggcacgcgcaagctgctgaacctcgaggaggtg 13368751 Query: 1348 gcggccgccgcggaggagctcgggttcaacgtgacggtggcggaggcgggggcggacgtg 1407 || || |||||| |||||| || ||||||||||||||||||||||| || || |||||| Sbjct: 13368752 gccgcggccgcgacggagcttggtttcaacgtgacggtggcggaggccggtgctgacgtg 13368811 Query: 1408 ccggcgttcgcggcgctggtgaacgcggcggacgtgctgctggcggtgcacggcgccggg 1467 || ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 13368812 cccgcgttcgcggcgctggtgaactcggcggacgtgctgctggccgtgcacggcgccggg 13368871 Query: 1468 ctgacgaaccagatcttcctgccgacgcaggcagtggtgctgcagatcgtgccgtggggg 1527 |||||||||||||||||||| ||| || |||| |||||| |||||||||||||||||||| Sbjct: 13368872 ctgacgaaccagatcttcctcccggcggaggccgtggtggtgcagatcgtgccgtggggg 13368931 Query: 1528 aacatggactggatggcgaccaacttctacgggcagccggcgcgggagatgcagctccgg 1587 |||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||| Sbjct: 13368932 aacatggactggatggcgaccaacttttacgggcagccggcgagggacatgcagctccgg 13368991 Query: 1588 tacgtggagtactacgtggacgaggaggagacgagcctcaaggacaagtactcgagggat 1647 ||||||||||||||||| | |||||||||||||||||| ||| |||| |||||| | ||| Sbjct: 13368992 tacgtggagtactacgtcggcgaggaggagacgagcctgaagcacaactactcgcgagat 13369051 Query: 1648 cacgtggtgttcagggaccccaaggcgttgcacaagcaggggtggcaggcgctcgccgag 1707 ||| ||||||||| ||||||||||||| | ||| ||||| |||||| | ||||||| | Sbjct: 13369052 cacatggtgttcaaggaccccaaggcgctccacgcacagggatggcagacactcgccgcg 13369111 Query: 1708 accatcatgaagcaggacgtgaaggtgaacctcgccaggttccggcccttcctgctccag 1767 || ||||||||||||||||| |||| |||||| ||||||||||||| ||||||| ||| Sbjct: 13369112 actatcatgaagcaggacgtcgaggtcaacctcaccaggttccggccaatcctgctgcag 13369171 Query: 1768 gccatcgacaagctgcaggagta 1790 || |||||| ||||||| |||| Sbjct: 13369172 gcgctcgacaggctgcagcagta 13369194 Score = 182 bits (92), Expect = 3e-42 Identities = 110/116 (94%) Strand = Plus / Plus Query: 173 aggggcttcgcctccaagatcgagcccaagaagctcggcgccggcctcctcgccggctgc 232 |||||| || || ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 13367241 aggggcctcaccaccaagatcgagcccaagaagctcggcgtcggcctcctcgccggctgc 13367300 Query: 233 tgcctcgcgctcctcacctacgtctccctcgccaagctcttcgccatctactcccc 288 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 13367301 tgcctcgcgctcctcacctacgtctcccttgccaagctcttcgcaatctactcccc 13367356 Score = 63.9 bits (32), Expect = 2e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 104 tcgacggcgtactcgcggccgtccaagctgccgggcggcg 143 |||||||||||||| |||||||| |||||||||||||||| Sbjct: 13367163 tcgacggcgtactcccggccgtcgaagctgccgggcggcg 13367202 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 1422 gctggtgaacgcggcggacgtgctgctggcggtgcacggcgccgggctgac 1472 |||||||||| ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 13496483 gctggtgaactcggcggacgtgatggtgggcgtgcacggcgcagggctgac 13496533
>dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1521_G01 Length = 144102 Score = 1195 bits (603), Expect = 0.0 Identities = 1024/1163 (88%), Gaps = 1/1163 (0%) Strand = Plus / Plus Query: 629 tgcgacgagaatggcgtggacgaggggttcccctacgcgcggccgtcggtgtgcgagctc 688 ||||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 93283 tgcgacgagaacggcgtggacgagggcttcccgtacgcgcggccgtcggtttgcgagctg 93342 Query: 689 tccggcgacatccggatcagccc-aagcagaagaccatgtacctggtgaacccgtcgggc 747 | ||||||| |||| ||||||| |||||||||||||| ||| | ||||||||||||||| Sbjct: 93343 tacggcgacgtccgcgtcagccccaagcagaagaccatttacgtcgtgaacccgtcgggc 93402 Query: 748 gccggtggcttcgacgagaacggcgagaagcggctccggccgtacgcccgcaaggacgac 807 ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 93403 gccggcggcttcgacgagaacggcgagaagcggctccggccctacgcccgcaaggacgat 93462 Query: 808 ttcctcctgcccgccgtggtggaggtgaccgtgaagtcggtcccgtccccggcggccgcg 867 |||||||| || | ||||||||||||||| | ||||| || || ||| |||||| || Sbjct: 93463 ttcctcctcccgggcgtggtggaggtgactatcaagtccgtgccctccgaggcggcggcc 93522 Query: 868 ccgcagtgcacgaagaagcaccgcgtgccggcggtggtgttctccgtggccgggtacacg 927 || ||||||||||| ||||| ||| || || ||||||||||||||||||||||||||| Sbjct: 93523 cccaagtgcacgaagcagcacgccgtccccgccgtggtgttctccgtggccgggtacacg 93582 Query: 928 gacaacttcttccacgacaacacggacgcgctgatcccgctgttcctgacggcgtcgcac 987 ||||||||||||||||||| || || || |||||||||| ||||||||| || ||||| Sbjct: 93583 gacaacttcttccacgacatgaccgatgccatgatcccgctattcctgacgacggcgcac 93642 Query: 988 ctcaagggcgaggtgcagctgctgatcaccaactacaagccgtggtgggtgcagaagtac 1047 |||||||||||||| ||| | || |||||||||||||||||||||||||||||||||||| Sbjct: 93643 ctcaagggcgaggtccagatcctcatcaccaactacaagccgtggtgggtgcagaagtac 93702 Query: 1048 acgccggtgctgcgcaagctgtccaactacgaccccatcaacttcgacgccgacgccggg 1107 |||||| |||| ||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 93703 acgccgctgctccgcaagctgtccaactacgacgtcatcaacttcgacgaggacgccggc 93762 Query: 1108 gtgcactgcttctcggcggggtacctgggcctgtaccgggaccgggacctcatcatctcg 1167 |||||||||||| || ||||||||| || |||||||| ||||| |||||||||||||| Sbjct: 93763 gtgcactgcttcccgcaggggtacctcggtctgtaccgcgaccgcgacctcatcatctcc 93822 Query: 1168 ccgcacccgacccggaacccgcgcaactacaccatggtggactacaaccggttcatccgg 1227 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 93823 ccgcacccgacccgcaacccgcgcaactacaccatggtggactacaaccgcttcctccgc 93882 Query: 1228 tcggcgtacgcgctccggcgcgaccagccgtcggtgctcggggaggtccccgggatgcgc 1287 || | |||||||||||||| ||||||||||| || |||| ||||||||||| Sbjct: 93883 gacgctctggagctccggcgcgaccgcccgtcggtgctgggcgaggagcccgggatgcgg 93942 Query: 1288 ccccagatgctgatcatctcccgcggcggcacgcggaagctgctgaacctggaggaggtg 1347 || | |||||||||||||||||||| ||||||||| |||||||||||||| ||||||||| Sbjct: 93943 ccgcggatgctgatcatctcccgcgccggcacgcgcaagctgctgaacctcgaggaggtg 94002 Query: 1348 gcggccgccgcggaggagctcgggttcaacgtgacggtggcggaggcgggggcggacgtg 1407 || || |||||| |||||| || ||||||||||||||||||||||| || || |||||| Sbjct: 94003 gccgcggccgcgacggagcttggtttcaacgtgacggtggcggaggccggtgctgacgtg 94062 Query: 1408 ccggcgttcgcggcgctggtgaacgcggcggacgtgctgctggcggtgcacggcgccggg 1467 || ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 94063 cccgcgttcgcggcgctggtgaactcggcggacgtgctgctggccgtgcacggcgccggg 94122 Query: 1468 ctgacgaaccagatcttcctgccgacgcaggcagtggtgctgcagatcgtgccgtggggg 1527 |||||||||||||||||||| ||| || |||| |||||| |||||||||||||||||||| Sbjct: 94123 ctgacgaaccagatcttcctcccggcggaggccgtggtggtgcagatcgtgccgtggggg 94182 Query: 1528 aacatggactggatggcgaccaacttctacgggcagccggcgcgggagatgcagctccgg 1587 |||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||| Sbjct: 94183 aacatggactggatggcgaccaacttttacgggcagccggcgagggacatgcagctccgg 94242 Query: 1588 tacgtggagtactacgtggacgaggaggagacgagcctcaaggacaagtactcgagggat 1647 ||||||||||||||||| | |||||||||||||||||| ||| |||| |||||| | ||| Sbjct: 94243 tacgtggagtactacgtcggcgaggaggagacgagcctgaagcacaactactcgcgagat 94302 Query: 1648 cacgtggtgttcagggaccccaaggcgttgcacaagcaggggtggcaggcgctcgccgag 1707 ||| ||||||||| ||||||||||||| | ||| ||||| |||||| | ||||||| | Sbjct: 94303 cacatggtgttcaaggaccccaaggcgctccacgcacagggatggcagacactcgccgcg 94362 Query: 1708 accatcatgaagcaggacgtgaaggtgaacctcgccaggttccggcccttcctgctccag 1767 || ||||||||||||||||| |||| |||||| ||||||||||||| ||||||| ||| Sbjct: 94363 actatcatgaagcaggacgtcgaggtcaacctcaccaggttccggccaatcctgctgcag 94422 Query: 1768 gccatcgacaagctgcaggagta 1790 || |||||| ||||||| |||| Sbjct: 94423 gcgctcgacaggctgcagcagta 94445 Score = 182 bits (92), Expect = 3e-42 Identities = 110/116 (94%) Strand = Plus / Plus Query: 173 aggggcttcgcctccaagatcgagcccaagaagctcggcgccggcctcctcgccggctgc 232 |||||| || || ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 92492 aggggcctcaccaccaagatcgagcccaagaagctcggcgtcggcctcctcgccggctgc 92551 Query: 233 tgcctcgcgctcctcacctacgtctccctcgccaagctcttcgccatctactcccc 288 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 92552 tgcctcgcgctcctcacctacgtctcccttgccaagctcttcgcaatctactcccc 92607 Score = 63.9 bits (32), Expect = 2e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 104 tcgacggcgtactcgcggccgtccaagctgccgggcggcg 143 |||||||||||||| |||||||| |||||||||||||||| Sbjct: 92414 tcgacggcgtactcccggccgtcgaagctgccgggcggcg 92453
>dbj|AK070014.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038E13, full insert sequence Length = 2112 Score = 1179 bits (595), Expect = 0.0 Identities = 1023/1163 (87%), Gaps = 2/1163 (0%) Strand = Plus / Plus Query: 629 tgcgacgagaatggcgtggacgaggggttcccctacgcgcggccgtcggtgtgcgagctc 688 ||||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 629 tgcgacgagaacggcgtggacgagggcttcccgtacgcgcggccgtcggtttgcgagctg 688 Query: 689 tccggcgacatccggatcagccc-aagcagaagaccatgtacctggtgaacccgtcgggc 747 | ||||||| |||| ||||||| |||||||||||||| ||| | ||||||||||||||| Sbjct: 689 tacggcgacgtccgcgtcagccccaagcagaagaccatttacgtcgtgaacccgtcgggc 748 Query: 748 gccggtggcttcgacgagaacggcgagaagcggctccggccgtacgcccgcaaggacgac 807 ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 749 gccggcggcttcgacgagaacggcgagaagcggctccggccctacgcccgcaaggacgat 808 Query: 808 ttcctcctgcccgccgtggtggaggtgaccgtgaagtcggtcccgtccccggcggccgcg 867 |||||||| || | ||||||||||||||| | ||||| || || ||| |||||| || Sbjct: 809 ttcctcctcccgggcgtggtggaggtgactatcaagtccgtgccctccgaggcggcggcc 868 Query: 868 ccgcagtgcacgaagaagcaccgcgtgccggcggtggtgttctccgtggccgggtacacg 927 || ||||||||||| ||||| ||| || || ||||||||||||||||||||||||||| Sbjct: 869 cccaagtgcacgaagcagcacgccgtccccgccgtggtgttctccgtggccgggtacacg 928 Query: 928 gacaacttcttccacgacaacacggacgcgctgatcccgctgttcctgacggcgtcgcac 987 ||||||||||||||||||| || || || |||||||||| ||||||||| || ||||| Sbjct: 929 gacaacttcttccacgacatgaccgatgccatgatcccgctattcctgacgacggcgcac 988 Query: 988 ctcaagggcgaggtgcagctgctgatcaccaactacaagccgtggtgggtgcagaagtac 1047 |||||||||||||| ||| | || |||||||||||||||||||||||||||||||||||| Sbjct: 989 ctcaagggcgaggtccagatcctcatcaccaactacaagccgtggtgggtgcagaagtac 1048 Query: 1048 acgccggtgctgcgcaagctgtccaactacgaccccatcaacttcgacgccgacgccggg 1107 |||||| |||| ||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 1049 acgccgctgctccgcaagctgtccaactacgacgtcatcaacttcgacgaggacgccggc 1108 Query: 1108 gtgcactgcttctcggcggggtacctgggcctgtaccgggaccgggacctcatcatctcg 1167 |||||||||||| || ||||||||| || |||||||| ||||| |||||||||||||| Sbjct: 1109 gtgcactgcttcccgcaggggtacctcggtctgtaccgcgaccgcgacctcatcatctcc 1168 Query: 1168 ccgcacccgacccggaacccgcgcaactacaccatggtggactacaaccggttcatccgg 1227 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 1169 ccgcacccgacccgcaacccgcgcaactacaccatggtggactacaaccgcttcctccgc 1228 Query: 1228 tcggcgtacgcgctccggcgcgaccagccgtcggtgctcggggaggtccccgggatgcgc 1287 || | |||||||||||||| ||||||||||| || |||| ||||||||||| Sbjct: 1229 gacgctctggagctccggcgcgaccgcccgtcggtgctgggcgaggagcccgggatgcgg 1288 Query: 1288 ccccagatgctgatcatctcccgcggcggcacgcggaagctgctgaacctggaggaggtg 1347 || | |||||||||||||||||||| ||||||||| |||||||||||||| ||||||||| Sbjct: 1289 ccgcggatgctgatcatctcccgcgccggcacgcgcaagctgctgaacctcgaggaggtg 1348 Query: 1348 gcggccgccgcggaggagctcgggttcaacgtgacggtggcggaggcgggggcggacgtg 1407 || || |||||| |||||| || ||||||||||||||||||||||| || || |||||| Sbjct: 1349 gccgcggccgcgacggagcttggtttcaacgtgacggtggcggaggccggtgctgacgtg 1408 Query: 1408 ccggcgttcgcggcgctggtgaacgcggcggacgtgctgctggcggtgcacggcgccggg 1467 || ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 1409 cccgcgttcgcggcgctggtgaactcggcggacgtgctgctggccgtgcacggcgccggg 1468 Query: 1468 ctgacgaaccagatcttcctgccgacgcaggcagtggtgctgcagatcgtgccgtggggg 1527 |||||||||||||||||||| ||| || |||| |||||| |||||||||||||||||||| Sbjct: 1469 ctgacgaaccagatcttcctcccggcggaggccgtggtggtgcagatcgtgccgtggggg 1528 Query: 1528 aacatggactggatggcgaccaacttctacgggcagccggcgcgggagatgcagctccgg 1587 ||||||||||||||||||| |||||| ||||||||||||||| |||| |||||||||||| Sbjct: 1529 aacatggactggatggcga-caacttttacgggcagccggcgagggacatgcagctccgg 1587 Query: 1588 tacgtggagtactacgtggacgaggaggagacgagcctcaaggacaagtactcgagggat 1647 ||||||||||||||||| | |||||||||||||||||| ||| |||| |||||| | ||| Sbjct: 1588 tacgtggagtactacgtcggcgaggaggagacgagcctgaagcacaactactcgcgagat 1647 Query: 1648 cacgtggtgttcagggaccccaaggcgttgcacaagcaggggtggcaggcgctcgccgag 1707 ||| ||||||||| ||||||||||||| | ||| ||||| |||||| | ||||||| | Sbjct: 1648 cacatggtgttcaaggaccccaaggcgctccacgcacagggatggcagacactcgccgcg 1707 Query: 1708 accatcatgaagcaggacgtgaaggtgaacctcgccaggttccggcccttcctgctccag 1767 || ||||||||||||||||| |||| |||||| ||||||||||||| ||||||| ||| Sbjct: 1708 actatcatgaagcaggacgtcgaggtcaacctcaccaggttccggccaatcctgctgcag 1767 Query: 1768 gccatcgacaagctgcaggagta 1790 || |||||| ||||||| |||| Sbjct: 1768 gcgctcgacaggctgcagcagta 1790 Score = 192 bits (97), Expect = 4e-45 Identities = 133/145 (91%) Strand = Plus / Plus Query: 173 aggggcttcgcctccaagatcgagcccaagaagctcggcgccggcctcctcgccggctgc 232 |||||| || || ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 176 aggggcctcaccaccaagatcgagcccaagaagctcggcgtcggcctcctcgccggctgc 235 Query: 233 tgcctcgcgctcctcacctacgtctccctcgccaagctcttcgccatctactcccccgtc 292 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| || Sbjct: 236 tgcctcgcgctcctcacctacgtctcccttgccaagctcttcgcaatctactcccctgtg 295 Query: 293 ttcgctagcacggccaacacgtccg 317 ||||| ||||| |||| ||| |||| Sbjct: 296 ttcgccagcacagccagcacatccg 320 Score = 63.9 bits (32), Expect = 2e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 104 tcgacggcgtactcgcggccgtccaagctgccgggcggcg 143 |||||||||||||| |||||||| |||||||||||||||| Sbjct: 98 tcgacggcgtactcccggccgtcgaagctgccgggcggcg 137
>gb|AY106834.1| Zea mays PCO140173 mRNA sequence Length = 616 Score = 480 bits (242), Expect = e-131 Identities = 428/490 (87%) Strand = Plus / Plus Query: 1296 gctgatcatctcccgcggcggcacgcggaagctgctgaacctggaggaggtggcggccgc 1355 ||||||| |||| |||| |||||| ||| ||||||||||||||| ||||||||||| || Sbjct: 8 gctgatcgtctcgcgcgccggcacccggcggctgctgaacctggacgaggtggcggcggc 67 Query: 1356 cgcggaggagctcgggttcaacgtgacggtggcggaggcgggggcggacgtgccggcgtt 1415 ||||| ||||| |||||||||||||||| ||||||||| || ||||||||||||||||| Sbjct: 68 ggcggacgagctggggttcaacgtgacggcggcggaggccggcgcggacgtgccggcgtt 127 Query: 1416 cgcggcgctggtgaacgcggcggacgtgctgctggcggtgcacggcgccgggctgacgaa 1475 |||||||| |||||||||||| ||||||||| ||| ||||||||||||||||||||||| Sbjct: 128 cgcggcgcaggtgaacgcggccgacgtgctggtgggcgtgcacggcgccgggctgacgaa 187 Query: 1476 ccagatcttcctgccgacgcaggcagtggtgctgcagatcgtgccgtgggggaacatgga 1535 |||| | |||||||||||| |||| |||||| ||||||||||||||||||| || ||||| Sbjct: 188 ccaggtgttcctgccgacggaggccgtggtggtgcagatcgtgccgtggggcaagatgga 247 Query: 1536 ctggatggcgaccaacttctacgggcagccggcgcgggagatgcagctccggtacgtgga 1595 ||||||||| ||||||||||||| || ||||||| || | || |||||| ||| |||| Sbjct: 248 ctggatggccaccaacttctacgcgcggccggcggcggggctggggctccgctacctgga 307 Query: 1596 gtactacgtggacgaggaggagacgagcctcaaggacaagtactcgagggatcacgtggt 1655 ||||||||| | | |||||||||||||||||||||||||||| || |||| |||||||| Sbjct: 308 gtactacgtcggggcggaggagacgagcctcaaggacaagtacccgcgggagcacgtggt 367 Query: 1656 gttcagggaccccaaggcgttgcacaagcaggggtggcaggcgctcgccgagaccatcat 1715 |||||| ||||||| |||| | ||||||||||||||||||||||||||| ||||| |||| Sbjct: 368 gttcagcgaccccatggcgctccacaagcaggggtggcaggcgctcgcccagaccgtcat 427 Query: 1716 gaagcaggacgtgaaggtgaacctcgccaggttccggcccttcctgctccaggccatcga 1775 |||||||||||| | || |||||| | | |||||||||| | ||||| ||||| |||| Sbjct: 428 gaagcaggacgtcaccgtcaacctcactatgttccggcccgtgctgctgcaggcgctcga 487 Query: 1776 caagctgcag 1785 |||||||||| Sbjct: 488 caagctgcag 497
>dbj|AK243642.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100088A21, full insert sequence Length = 1765 Score = 343 bits (173), Expect = 2e-90 Identities = 497/601 (82%), Gaps = 3/601 (0%) Strand = Plus / Plus Query: 628 ctgcgacgagaatggcgtggacgaggggttcccctacgcgcggccgtcggtgtgcgagct 687 |||||| ||||| ||||| || ||||| ||||| || |||||||| |||| |||||||| Sbjct: 481 ctgcgatgagaacggcgttgatgagggcttcccatatgcgcggccaccggtctgcgagct 540 Query: 688 ctccggcgacatccggatcagcccaa-gcagaagaccatgtacctggtgaacccgtcggg 746 | ||||||| |||||||||||||||| | |||| ||||||| | | || || ||||| | Sbjct: 541 caccggcgatatccggatcagcccaaaggagaaaaccatgttcttcgtaaatccgtccag 600 Query: 747 cgccggtggcttcgacgagaacggcgagaagcggctccggccgtacgcccgcaaggacga 806 |||||| | ||||||| ||||| |||||| | |||| |||||||| ||||||||||| Sbjct: 601 cgccggcgcgttcgacggcaacggggagaagaagatccgaccgtacgctcgcaaggacga 660 Query: 807 cttcctcctgcccgccgtggtggaggtgaccgtgaagtcggtcccgtccccggcggccgc 866 ||||||||| || | ||| |||||||| | | | ||||||||| |||| ||||| ||| Sbjct: 661 cttcctcctcccgggcgtcgtggaggtcatcatcaagtcggtctcgtcgccggccatcgc 720 Query: 867 gccgcagtgcacgaagaagcaccgcgtgccggcggtggtgttctccgtggccgggtacac 926 |||| |||||| || ||| ||| ||||||||||| |||||||||||||| ||||| Sbjct: 721 gccggcctgcacgcggacccacaacgtcccggcggtggtcttctccgtggccggatacac 780 Query: 927 ggacaacttcttccacgacaacacggacgcgctgatcccgctgttcctgacggcgtcgca 986 |||||||||||||||||||||||||||| | ||||||| |||||||| ||| ||||||| Sbjct: 781 cgacaacttcttccacgacaacacggacgtgatgatccctctgttcctaacgacgtcgca 840 Query: 987 cctcaagggcgaggtgcagctgctgatcaccaactacaagccgtggtgggtgcagaagta 1046 |||| |||||||||||| | || |||||||||| |||||||||||||||||| |||| Sbjct: 841 cctcgccggcgaggtgcagttcctcatcaccaacttcaagccgtggtgggtgcacaagtt 900 Query: 1047 cacgccggtgctgcgcaagctgtccaactacgaccccatcaacttcgacgccgacgccgg 1106 ||||||| | ||| ||||| |||||||||| |||||||||||| |||| || Sbjct: 901 cacgccgctcctgaagaagctctccaactacggggtgatcaacttcgacaaggacgacga 960 Query: 1107 ggtgcactgcttctcggcg-gggtacctgggcctgtaccgggaccgggacctcatcatct 1165 ||||||||||||| ||||| || |||| || |||||||| ||||| ||||||||||||| Sbjct: 961 ggtgcactgcttc-cggcgcggccacctcgggctgtaccgcgaccgcgacctcatcatct 1019 Query: 1166 cgccgcacccgacccggaacccgcgcaactacaccatggtggactacaaccggttcatcc 1225 | ||||||||||| || ||||||||||||||| ||||||| ||||||||| ||||| ||| Sbjct: 1020 ccccgcacccgacgcgaaacccgcgcaactactccatggtcgactacaacaggttcctcc 1079 Query: 1226 g 1226 | Sbjct: 1080 g 1080 Score = 268 bits (135), Expect = 8e-68 Identities = 303/359 (84%) Strand = Plus / Plus Query: 1378 gtgacggtggcggaggcgggggcggacgtgccggcgttcgcggcgctggtgaacgcggcg 1437 ||||| ||||||||||| || |||||||||| | |||||| | | ||||||||||||| Sbjct: 1232 gtgaccgtggcggaggccggcgcggacgtgcgcgggttcgccgagaaggtgaacgcggcg 1291 Query: 1438 gacgtgctgctggcggtgcacggcgccgggctgacgaaccagatcttcctgccgacgcag 1497 ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| Sbjct: 1292 gacgtgctgctggcggtgcacggcgccgggctgacaaaccagatcttcctcccaacgggc 1351 Query: 1498 gcagtggtgctgcagatcgtgccgtgggggaacatggactggatggcgaccaacttctac 1557 || ||| | | ||||||||||||||||| || |||||||||||||| || ||||| ||| Sbjct: 1352 gccgtgctcgtacagatcgtgccgtggggcaagatggactggatggccacaaacttttac 1411 Query: 1558 gggcagccggcgcgggagatgcagctccggtacgtggagtactacgtggacgaggaggag 1617 |||||||||||||| || |||| |||||||||||| ||||| ||||| ||||||||| Sbjct: 1412 gggcagccggcgcgcgacatgcggctccggtacgtcgagtattacgtctcggaggaggag 1471 Query: 1618 acgagcctcaaggacaagtactcgagggatcacgtggtgttcagggaccccaaggcgttg 1677 |||| ||||||||||||||| | ||||| ||| ||||||| |||||||| ||| | Sbjct: 1472 acgacgctcaaggacaagtacccaagggaccactacgtgttcaaggaccccatggccatc 1531 Query: 1678 cacaagcaggggtggcaggcgctcgccgagaccatcatgaagcaggacgtgaaggtgaa 1736 ||| |||||| |||| |||||||||||||| | |||||||||||||||| | |||||| Sbjct: 1532 cacgcgcagggctggccggcgctcgccgagatcgtcatgaagcaggacgtcacggtgaa 1590 Score = 77.8 bits (39), Expect = 1e-10 Identities = 90/107 (84%) Strand = Plus / Plus Query: 190 gatcgagcccaagaagctcggcgccggcctcctcgccggctgctgcctcgcgctcctcac 249 ||||||||||||||||||||| || || ||||||||||||||||||| |||||||| Sbjct: 160 gatcgagcccaagaagctcgggattgggctggtcgccggctgctgcctcgctctcctcac 219 Query: 250 ctacgtctccctcgccaagctcttcgccatctactcccccgtcttcg 296 |||| ||||| | ||| || |||||||||||||| || ||||||| Sbjct: 220 ctacatctcctttgcccgccttttcgccatctactcgccggtcttcg 266 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 104 tcgacggcgtactcgcggccgtccaagc 131 |||||||||||| ||||||||||||||| Sbjct: 77 tcgacggcgtacacgcggccgtccaagc 104
>ref|NM_001064151.1| Oryza sativa (japonica cultivar-group) Os06g0470000 (Os06g0470000) mRNA, complete cds Length = 1914 Score = 343 bits (173), Expect = 2e-90 Identities = 497/601 (82%), Gaps = 3/601 (0%) Strand = Plus / Plus Query: 628 ctgcgacgagaatggcgtggacgaggggttcccctacgcgcggccgtcggtgtgcgagct 687 |||||| ||||| ||||| || ||||| ||||| || |||||||| |||| |||||||| Sbjct: 750 ctgcgatgagaacggcgttgatgagggcttcccatatgcgcggccaccggtctgcgagct 809 Query: 688 ctccggcgacatccggatcagcccaa-gcagaagaccatgtacctggtgaacccgtcggg 746 | ||||||| |||||||||||||||| | |||| ||||||| | | || || ||||| | Sbjct: 810 caccggcgatatccggatcagcccaaaggagaaaaccatgttcttcgtaaatccgtccag 869 Query: 747 cgccggtggcttcgacgagaacggcgagaagcggctccggccgtacgcccgcaaggacga 806 |||||| | ||||||| ||||| |||||| | |||| |||||||| ||||||||||| Sbjct: 870 cgccggcgcgttcgacggcaacggggagaagaagatccgaccgtacgctcgcaaggacga 929 Query: 807 cttcctcctgcccgccgtggtggaggtgaccgtgaagtcggtcccgtccccggcggccgc 866 ||||||||| || | ||| |||||||| | | | ||||||||| |||| ||||| ||| Sbjct: 930 cttcctcctcccgggcgtcgtggaggtcatcatcaagtcggtctcgtcgccggccatcgc 989 Query: 867 gccgcagtgcacgaagaagcaccgcgtgccggcggtggtgttctccgtggccgggtacac 926 |||| |||||| || ||| ||| ||||||||||| |||||||||||||| ||||| Sbjct: 990 gccggcctgcacgcggacccacaacgtcccggcggtggtcttctccgtggccggatacac 1049 Query: 927 ggacaacttcttccacgacaacacggacgcgctgatcccgctgttcctgacggcgtcgca 986 |||||||||||||||||||||||||||| | ||||||| |||||||| ||| ||||||| Sbjct: 1050 cgacaacttcttccacgacaacacggacgtgatgatccctctgttcctaacgacgtcgca 1109 Query: 987 cctcaagggcgaggtgcagctgctgatcaccaactacaagccgtggtgggtgcagaagta 1046 |||| |||||||||||| | || |||||||||| |||||||||||||||||| |||| Sbjct: 1110 cctcgccggcgaggtgcagttcctcatcaccaacttcaagccgtggtgggtgcacaagtt 1169 Query: 1047 cacgccggtgctgcgcaagctgtccaactacgaccccatcaacttcgacgccgacgccgg 1106 ||||||| | ||| ||||| |||||||||| |||||||||||| |||| || Sbjct: 1170 cacgccgctcctgaagaagctctccaactacggggtgatcaacttcgacaaggacgacga 1229 Query: 1107 ggtgcactgcttctcggcg-gggtacctgggcctgtaccgggaccgggacctcatcatct 1165 ||||||||||||| ||||| || |||| || |||||||| ||||| ||||||||||||| Sbjct: 1230 ggtgcactgcttc-cggcgcggccacctcgggctgtaccgcgaccgcgacctcatcatct 1288 Query: 1166 cgccgcacccgacccggaacccgcgcaactacaccatggtggactacaaccggttcatcc 1225 | ||||||||||| || ||||||||||||||| ||||||| ||||||||| ||||| ||| Sbjct: 1289 ccccgcacccgacgcgaaacccgcgcaactactccatggtcgactacaacaggttcctcc 1348 Query: 1226 g 1226 | Sbjct: 1349 g 1349 Score = 276 bits (139), Expect = 3e-70 Identities = 304/359 (84%) Strand = Plus / Plus Query: 1378 gtgacggtggcggaggcgggggcggacgtgccggcgttcgcggcgctggtgaacgcggcg 1437 ||||| ||||||||||| || |||||||||| | |||||| | | ||||||||||||| Sbjct: 1501 gtgaccgtggcggaggccggcgcggacgtgcgcgggttcgccgagaaggtgaacgcggcg 1560 Query: 1438 gacgtgctgctggcggtgcacggcgccgggctgacgaaccagatcttcctgccgacgcag 1497 ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| Sbjct: 1561 gacgtgctgctggcggtgcacggcgccgggctgacaaaccagatcttcctcccaacgggc 1620 Query: 1498 gcagtggtgctgcagatcgtgccgtgggggaacatggactggatggcgaccaacttctac 1557 || ||| | | ||||||||||||||||| || |||||||||||||| || ||||||||| Sbjct: 1621 gccgtgctcgtacagatcgtgccgtggggcaagatggactggatggccacaaacttctac 1680 Query: 1558 gggcagccggcgcgggagatgcagctccggtacgtggagtactacgtggacgaggaggag 1617 |||||||||||||| || |||| |||||||||||| ||||| ||||| ||||||||| Sbjct: 1681 gggcagccggcgcgcgacatgcggctccggtacgtcgagtattacgtctcggaggaggag 1740 Query: 1618 acgagcctcaaggacaagtactcgagggatcacgtggtgttcagggaccccaaggcgttg 1677 |||| ||||||||||||||| | ||||| ||| ||||||| |||||||| ||| | Sbjct: 1741 acgacgctcaaggacaagtacccaagggaccactacgtgttcaaggaccccatggccatc 1800 Query: 1678 cacaagcaggggtggcaggcgctcgccgagaccatcatgaagcaggacgtgaaggtgaa 1736 ||| |||||| |||| |||||||||||||| | |||||||||||||||| | |||||| Sbjct: 1801 cacgcgcagggctggccggcgctcgccgagatcgtcatgaagcaggacgtcacggtgaa 1859 Score = 77.8 bits (39), Expect = 1e-10 Identities = 90/107 (84%) Strand = Plus / Plus Query: 190 gatcgagcccaagaagctcggcgccggcctcctcgccggctgctgcctcgcgctcctcac 249 ||||||||||||||||||||| || || ||||||||||||||||||| |||||||| Sbjct: 429 gatcgagcccaagaagctcgggattgggctggtcgccggctgctgcctcgctctcctcac 488 Query: 250 ctacgtctccctcgccaagctcttcgccatctactcccccgtcttcg 296 |||| ||||| | ||| || |||||||||||||| || ||||||| Sbjct: 489 ctacatctcctttgcccgccttttcgccatctactcgccggtcttcg 535 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 104 tcgacggcgtactcgcggccgtccaagc 131 |||||||||||| ||||||||||||||| Sbjct: 346 tcgacggcgtacacgcggccgtccaagc 373
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 343 bits (173), Expect = 2e-90 Identities = 497/601 (82%), Gaps = 3/601 (0%) Strand = Plus / Plus Query: 628 ctgcgacgagaatggcgtggacgaggggttcccctacgcgcggccgtcggtgtgcgagct 687 |||||| ||||| ||||| || ||||| ||||| || |||||||| |||| |||||||| Sbjct: 15384354 ctgcgatgagaacggcgttgatgagggcttcccatatgcgcggccaccggtctgcgagct 15384413 Query: 688 ctccggcgacatccggatcagcccaa-gcagaagaccatgtacctggtgaacccgtcggg 746 | ||||||| |||||||||||||||| | |||| ||||||| | | || || ||||| | Sbjct: 15384414 caccggcgatatccggatcagcccaaaggagaaaaccatgttcttcgtaaatccgtccag 15384473 Query: 747 cgccggtggcttcgacgagaacggcgagaagcggctccggccgtacgcccgcaaggacga 806 |||||| | ||||||| ||||| |||||| | |||| |||||||| ||||||||||| Sbjct: 15384474 cgccggcgcgttcgacggcaacggggagaagaagatccgaccgtacgctcgcaaggacga 15384533 Query: 807 cttcctcctgcccgccgtggtggaggtgaccgtgaagtcggtcccgtccccggcggccgc 866 ||||||||| || | ||| |||||||| | | | ||||||||| |||| ||||| ||| Sbjct: 15384534 cttcctcctcccgggcgtcgtggaggtcatcatcaagtcggtctcgtcgccggccatcgc 15384593 Query: 867 gccgcagtgcacgaagaagcaccgcgtgccggcggtggtgttctccgtggccgggtacac 926 |||| |||||| || ||| ||| ||||||||||| |||||||||||||| ||||| Sbjct: 15384594 gccggcctgcacgcggacccacaacgtcccggcggtggtcttctccgtggccggatacac 15384653 Query: 927 ggacaacttcttccacgacaacacggacgcgctgatcccgctgttcctgacggcgtcgca 986 |||||||||||||||||||||||||||| | ||||||| |||||||| ||| ||||||| Sbjct: 15384654 cgacaacttcttccacgacaacacggacgtgatgatccctctgttcctaacgacgtcgca 15384713 Query: 987 cctcaagggcgaggtgcagctgctgatcaccaactacaagccgtggtgggtgcagaagta 1046 |||| |||||||||||| | || |||||||||| |||||||||||||||||| |||| Sbjct: 15384714 cctcgccggcgaggtgcagttcctcatcaccaacttcaagccgtggtgggtgcacaagtt 15384773 Query: 1047 cacgccggtgctgcgcaagctgtccaactacgaccccatcaacttcgacgccgacgccgg 1106 ||||||| | ||| ||||| |||||||||| |||||||||||| |||| || Sbjct: 15384774 cacgccgctcctgaagaagctctccaactacggggtgatcaacttcgacaaggacgacga 15384833 Query: 1107 ggtgcactgcttctcggcg-gggtacctgggcctgtaccgggaccgggacctcatcatct 1165 ||||||||||||| ||||| || |||| || |||||||| ||||| ||||||||||||| Sbjct: 15384834 ggtgcactgcttc-cggcgcggccacctcgggctgtaccgcgaccgcgacctcatcatct 15384892 Query: 1166 cgccgcacccgacccggaacccgcgcaactacaccatggtggactacaaccggttcatcc 1225 | ||||||||||| || ||||||||||||||| ||||||| ||||||||| ||||| ||| Sbjct: 15384893 ccccgcacccgacgcgaaacccgcgcaactactccatggtcgactacaacaggttcctcc 15384952 Query: 1226 g 1226 | Sbjct: 15384953 g 15384953 Score = 276 bits (139), Expect = 3e-70 Identities = 304/359 (84%) Strand = Plus / Plus Query: 1378 gtgacggtggcggaggcgggggcggacgtgccggcgttcgcggcgctggtgaacgcggcg 1437 ||||| ||||||||||| || |||||||||| | |||||| | | ||||||||||||| Sbjct: 15385105 gtgaccgtggcggaggccggcgcggacgtgcgcgggttcgccgagaaggtgaacgcggcg 15385164 Query: 1438 gacgtgctgctggcggtgcacggcgccgggctgacgaaccagatcttcctgccgacgcag 1497 ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| Sbjct: 15385165 gacgtgctgctggcggtgcacggcgccgggctgacaaaccagatcttcctcccaacgggc 15385224 Query: 1498 gcagtggtgctgcagatcgtgccgtgggggaacatggactggatggcgaccaacttctac 1557 || ||| | | ||||||||||||||||| || |||||||||||||| || ||||||||| Sbjct: 15385225 gccgtgctcgtacagatcgtgccgtggggcaagatggactggatggccacaaacttctac 15385284 Query: 1558 gggcagccggcgcgggagatgcagctccggtacgtggagtactacgtggacgaggaggag 1617 |||||||||||||| || |||| |||||||||||| ||||| ||||| ||||||||| Sbjct: 15385285 gggcagccggcgcgcgacatgcggctccggtacgtcgagtattacgtctcggaggaggag 15385344 Query: 1618 acgagcctcaaggacaagtactcgagggatcacgtggtgttcagggaccccaaggcgttg 1677 |||| ||||||||||||||| | ||||| ||| ||||||| |||||||| ||| | Sbjct: 15385345 acgacgctcaaggacaagtacccaagggaccactacgtgttcaaggaccccatggccatc 15385404 Query: 1678 cacaagcaggggtggcaggcgctcgccgagaccatcatgaagcaggacgtgaaggtgaa 1736 ||| |||||| |||| |||||||||||||| | |||||||||||||||| | |||||| Sbjct: 15385405 cacgcgcagggctggccggcgctcgccgagatcgtcatgaagcaggacgtcacggtgaa 15385463 Score = 77.8 bits (39), Expect = 1e-10 Identities = 90/107 (84%) Strand = Plus / Plus Query: 190 gatcgagcccaagaagctcggcgccggcctcctcgccggctgctgcctcgcgctcctcac 249 ||||||||||||||||||||| || || ||||||||||||||||||| |||||||| Sbjct: 15383717 gatcgagcccaagaagctcgggattgggctggtcgccggctgctgcctcgctctcctcac 15383776 Query: 250 ctacgtctccctcgccaagctcttcgccatctactcccccgtcttcg 296 |||| ||||| | ||| || |||||||||||||| || ||||||| Sbjct: 15383777 ctacatctcctttgcccgccttttcgccatctactcgccggtcttcg 15383823 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1830 gggttggggttggggttggtgatg 1853 |||||||||||||||||||||||| Sbjct: 194397 gggttggggttggggttggtgatg 194374 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 104 tcgacggcgtactcgcggccgtccaagc 131 |||||||||||| ||||||||||||||| Sbjct: 15383634 tcgacggcgtacacgcggccgtccaagc 15383661 Score = 44.1 bits (22), Expect = 2.0 Identities = 43/50 (86%) Strand = Plus / Minus Query: 893 tgccggcggtggtgttctccgtggccgggtacacggacaacttcttccac 942 |||||||||||||||||||| || ||| |||| | ||||||||||||| Sbjct: 11684272 tgccggcggtggtgttctccacgggcggctacagcgtcaacttcttccac 11684223 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 gaactcgacggcgtactcgcg 120 ||||||||||||||||||||| Sbjct: 10008602 gaactcgacggcgtactcgcg 10008622 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 ggcgccgccggtggggagggg 613 ||||||||||||||||||||| Sbjct: 22386132 ggcgccgccggtggggagggg 22386112
>dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0613F06 Length = 184289 Score = 343 bits (173), Expect = 2e-90 Identities = 497/601 (82%), Gaps = 3/601 (0%) Strand = Plus / Plus Query: 628 ctgcgacgagaatggcgtggacgaggggttcccctacgcgcggccgtcggtgtgcgagct 687 |||||| ||||| ||||| || ||||| ||||| || |||||||| |||| |||||||| Sbjct: 51869 ctgcgatgagaacggcgttgatgagggcttcccatatgcgcggccaccggtctgcgagct 51928 Query: 688 ctccggcgacatccggatcagcccaa-gcagaagaccatgtacctggtgaacccgtcggg 746 | ||||||| |||||||||||||||| | |||| ||||||| | | || || ||||| | Sbjct: 51929 caccggcgatatccggatcagcccaaaggagaaaaccatgttcttcgtaaatccgtccag 51988 Query: 747 cgccggtggcttcgacgagaacggcgagaagcggctccggccgtacgcccgcaaggacga 806 |||||| | ||||||| ||||| |||||| | |||| |||||||| ||||||||||| Sbjct: 51989 cgccggcgcgttcgacggcaacggggagaagaagatccgaccgtacgctcgcaaggacga 52048 Query: 807 cttcctcctgcccgccgtggtggaggtgaccgtgaagtcggtcccgtccccggcggccgc 866 ||||||||| || | ||| |||||||| | | | ||||||||| |||| ||||| ||| Sbjct: 52049 cttcctcctcccgggcgtcgtggaggtcatcatcaagtcggtctcgtcgccggccatcgc 52108 Query: 867 gccgcagtgcacgaagaagcaccgcgtgccggcggtggtgttctccgtggccgggtacac 926 |||| |||||| || ||| ||| ||||||||||| |||||||||||||| ||||| Sbjct: 52109 gccggcctgcacgcggacccacaacgtcccggcggtggtcttctccgtggccggatacac 52168 Query: 927 ggacaacttcttccacgacaacacggacgcgctgatcccgctgttcctgacggcgtcgca 986 |||||||||||||||||||||||||||| | ||||||| |||||||| ||| ||||||| Sbjct: 52169 cgacaacttcttccacgacaacacggacgtgatgatccctctgttcctaacgacgtcgca 52228 Query: 987 cctcaagggcgaggtgcagctgctgatcaccaactacaagccgtggtgggtgcagaagta 1046 |||| |||||||||||| | || |||||||||| |||||||||||||||||| |||| Sbjct: 52229 cctcgccggcgaggtgcagttcctcatcaccaacttcaagccgtggtgggtgcacaagtt 52288 Query: 1047 cacgccggtgctgcgcaagctgtccaactacgaccccatcaacttcgacgccgacgccgg 1106 ||||||| | ||| ||||| |||||||||| |||||||||||| |||| || Sbjct: 52289 cacgccgctcctgaagaagctctccaactacggggtgatcaacttcgacaaggacgacga 52348 Query: 1107 ggtgcactgcttctcggcg-gggtacctgggcctgtaccgggaccgggacctcatcatct 1165 ||||||||||||| ||||| || |||| || |||||||| ||||| ||||||||||||| Sbjct: 52349 ggtgcactgcttc-cggcgcggccacctcgggctgtaccgcgaccgcgacctcatcatct 52407 Query: 1166 cgccgcacccgacccggaacccgcgcaactacaccatggtggactacaaccggttcatcc 1225 | ||||||||||| || ||||||||||||||| ||||||| ||||||||| ||||| ||| Sbjct: 52408 ccccgcacccgacgcgaaacccgcgcaactactccatggtcgactacaacaggttcctcc 52467 Query: 1226 g 1226 | Sbjct: 52468 g 52468 Score = 276 bits (139), Expect = 3e-70 Identities = 304/359 (84%) Strand = Plus / Plus Query: 1378 gtgacggtggcggaggcgggggcggacgtgccggcgttcgcggcgctggtgaacgcggcg 1437 ||||| ||||||||||| || |||||||||| | |||||| | | ||||||||||||| Sbjct: 52620 gtgaccgtggcggaggccggcgcggacgtgcgcgggttcgccgagaaggtgaacgcggcg 52679 Query: 1438 gacgtgctgctggcggtgcacggcgccgggctgacgaaccagatcttcctgccgacgcag 1497 ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| Sbjct: 52680 gacgtgctgctggcggtgcacggcgccgggctgacaaaccagatcttcctcccaacgggc 52739 Query: 1498 gcagtggtgctgcagatcgtgccgtgggggaacatggactggatggcgaccaacttctac 1557 || ||| | | ||||||||||||||||| || |||||||||||||| || ||||||||| Sbjct: 52740 gccgtgctcgtacagatcgtgccgtggggcaagatggactggatggccacaaacttctac 52799 Query: 1558 gggcagccggcgcgggagatgcagctccggtacgtggagtactacgtggacgaggaggag 1617 |||||||||||||| || |||| |||||||||||| ||||| ||||| ||||||||| Sbjct: 52800 gggcagccggcgcgcgacatgcggctccggtacgtcgagtattacgtctcggaggaggag 52859 Query: 1618 acgagcctcaaggacaagtactcgagggatcacgtggtgttcagggaccccaaggcgttg 1677 |||| ||||||||||||||| | ||||| ||| ||||||| |||||||| ||| | Sbjct: 52860 acgacgctcaaggacaagtacccaagggaccactacgtgttcaaggaccccatggccatc 52919 Query: 1678 cacaagcaggggtggcaggcgctcgccgagaccatcatgaagcaggacgtgaaggtgaa 1736 ||| |||||| |||| |||||||||||||| | |||||||||||||||| | |||||| Sbjct: 52920 cacgcgcagggctggccggcgctcgccgagatcgtcatgaagcaggacgtcacggtgaa 52978 Score = 77.8 bits (39), Expect = 1e-10 Identities = 90/107 (84%) Strand = Plus / Plus Query: 190 gatcgagcccaagaagctcggcgccggcctcctcgccggctgctgcctcgcgctcctcac 249 ||||||||||||||||||||| || || ||||||||||||||||||| |||||||| Sbjct: 51232 gatcgagcccaagaagctcgggattgggctggtcgccggctgctgcctcgctctcctcac 51291 Query: 250 ctacgtctccctcgccaagctcttcgccatctactcccccgtcttcg 296 |||| ||||| | ||| || |||||||||||||| || ||||||| Sbjct: 51292 ctacatctcctttgcccgccttttcgccatctactcgccggtcttcg 51338 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 104 tcgacggcgtactcgcggccgtccaagc 131 |||||||||||| ||||||||||||||| Sbjct: 51149 tcgacggcgtacacgcggccgtccaagc 51176
>gb|AY106252.1| Zea mays PCO094239 mRNA sequence Length = 457 Score = 212 bits (107), Expect = 4e-51 Identities = 209/243 (86%) Strand = Plus / Plus Query: 1425 ggtgaacgcggcggacgtgctgctggcggtgcacggcgccgggctgacgaaccagatctt 1484 |||||||||||| |||||||| || |||||||||||||||||||| |||||||||||||| Sbjct: 196 ggtgaacgcggccgacgtgctcctcgcggtgcacggcgccgggctcacgaaccagatctt 255 Query: 1485 cctgccgacgcaggcagtggtgctgcagatcgtgccgtgggggaacatggactggatggc 1544 |||||| ||| || ||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 256 cctgcccacgggcgccgtgctcgtgcagatcgtgccgtggggcaagatggactggatggc 315 Query: 1545 gaccaacttctacgggcagccggcgcgggagatgcagctccggtacgtggagtactacgt 1604 |||||||||||||| ||||||||||| || |||| ||||||||||| ||||||||||| Sbjct: 316 caccaacttctacggccagccggcgcgcgacatgcgcctccggtacgtcgagtactacgt 375 Query: 1605 ggacgaggaggagacgagcctcaaggacaagtactcgagggatcacgtggtgttcaggga 1664 ||||||||||||| ||||||||||||||| | ||||| ||| ||||||| ||| Sbjct: 376 ctcggaggaggagacgacgctcaaggacaagtacccaagggaccactacgtgttcaagga 435 Query: 1665 ccc 1667 ||| Sbjct: 436 ccc 438
>ref|NM_001048396.1| Oryza sativa (japonica cultivar-group) Os01g0118600 (Os01g0118600) mRNA, complete cds Length = 1815 Score = 99.6 bits (50), Expect = 4e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 1501 gtggtgctgcagatcgtgccgtgggggaacatggactggatggcgaccaacttctacggg 1560 |||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 1525 gtggtggtgcagatcgtgccgtgggggaggatggagtggatggcgaccaacttctacggc 1584 Query: 1561 cagccggcgcgggagatgcagctccggtacgtggagtactacgtgg 1606 ||||||| || ||| ||||| |||||||||||||| |||||| Sbjct: 1585 gcgccggcggcggccatggagctcaggtacgtggagtaccacgtgg 1630 Score = 52.0 bits (26), Expect = 0.008 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1438 gacgtgctgctggcggtgcacggcgccgggctgacgaaccag 1479 ||||||||| ||| || |||||||||||||||||||||||| Sbjct: 1462 gacgtgctggtgggcgtccacggcgccgggctgacgaaccag 1503
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 99.6 bits (50), Expect = 4e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 1501 gtggtgctgcagatcgtgccgtgggggaacatggactggatggcgaccaacttctacggg 1560 |||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 1065968 gtggtggtgcagatcgtgccgtgggggaggatggagtggatggcgaccaacttctacggc 1065909 Query: 1561 cagccggcgcgggagatgcagctccggtacgtggagtactacgtgg 1606 ||||||| || ||| ||||| |||||||||||||| |||||| Sbjct: 1065908 gcgccggcggcggccatggagctcaggtacgtggagtaccacgtgg 1065863 Score = 52.0 bits (26), Expect = 0.008 Identities = 38/42 (90%) Strand = Plus / Minus Query: 1438 gacgtgctgctggcggtgcacggcgccgggctgacgaaccag 1479 ||||||||| ||| || |||||||||||||||||||||||| Sbjct: 1066031 gacgtgctggtgggcgtccacggcgccgggctgacgaaccag 1065990 Score = 50.1 bits (25), Expect = 0.033 Identities = 73/89 (82%) Strand = Plus / Minus Query: 857 cggcggccgcgccgcagtgcacgaagaagcaccgcgtgccggcggtggtgttctccgtgg 916 |||||| |||||||| ||||||| | |||| |||||| || |||| ||||||| | | Sbjct: 1057352 cggcgggcgcgccgcggtgcacgcgggcgcacgacgtgcccgccgtggcgttctccatcg 1057293 Query: 917 ccgggtacacggacaacttcttccacgac 945 ||||||||||| |||| ||||||||||| Sbjct: 1057292 gcgggtacacgggcaacatcttccacgac 1057264 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1453 gtgcacggcgccgggctgacgaac 1476 |||||||||||||||||||||||| Sbjct: 1078124 gtgcacggcgccgggctgacgaac 1078101 Score = 46.1 bits (23), Expect = 0.52 Identities = 38/42 (90%), Gaps = 2/42 (4%) Strand = Plus / Minus Query: 1309 cgcggcggcac--gcggaagctgctgaacctggaggaggtgg 1348 ||||||||||| |||||||||| ||||| |||||||||||| Sbjct: 1071945 cgcggcggcacccgcggaagctgatgaacgtggaggaggtgg 1071904 Score = 42.1 bits (21), Expect = 8.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 1069 tccaactacgaccccatcaacttcgacgccgac 1101 ||||||||||||| ||||||| |||||| |||| Sbjct: 1089952 tccaactacgacctcatcaacctcgacgacgac 1089920
>dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0494A10 Length = 145576 Score = 99.6 bits (50), Expect = 4e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 1501 gtggtgctgcagatcgtgccgtgggggaacatggactggatggcgaccaacttctacggg 1560 |||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 103636 gtggtggtgcagatcgtgccgtgggggaggatggagtggatggcgaccaacttctacggc 103577 Query: 1561 cagccggcgcgggagatgcagctccggtacgtggagtactacgtgg 1606 ||||||| || ||| ||||| |||||||||||||| |||||| Sbjct: 103576 gcgccggcggcggccatggagctcaggtacgtggagtaccacgtgg 103531 Score = 52.0 bits (26), Expect = 0.008 Identities = 38/42 (90%) Strand = Plus / Minus Query: 1438 gacgtgctgctggcggtgcacggcgccgggctgacgaaccag 1479 ||||||||| ||| || |||||||||||||||||||||||| Sbjct: 103699 gacgtgctggtgggcgtccacggcgccgggctgacgaaccag 103658 Score = 50.1 bits (25), Expect = 0.033 Identities = 73/89 (82%) Strand = Plus / Minus Query: 857 cggcggccgcgccgcagtgcacgaagaagcaccgcgtgccggcggtggtgttctccgtgg 916 |||||| |||||||| ||||||| | |||| |||||| || |||| ||||||| | | Sbjct: 95020 cggcgggcgcgccgcggtgcacgcgggcgcacgacgtgcccgccgtggcgttctccatcg 94961 Query: 917 ccgggtacacggacaacttcttccacgac 945 ||||||||||| |||| ||||||||||| Sbjct: 94960 gcgggtacacgggcaacatcttccacgac 94932 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1453 gtgcacggcgccgggctgacgaac 1476 |||||||||||||||||||||||| Sbjct: 115792 gtgcacggcgccgggctgacgaac 115769 Score = 46.1 bits (23), Expect = 0.52 Identities = 38/42 (90%), Gaps = 2/42 (4%) Strand = Plus / Minus Query: 1309 cgcggcggcac--gcggaagctgctgaacctggaggaggtgg 1348 ||||||||||| |||||||||| ||||| |||||||||||| Sbjct: 109613 cgcggcggcacccgcggaagctgatgaacgtggaggaggtgg 109572 Score = 42.1 bits (21), Expect = 8.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 1069 tccaactacgaccccatcaacttcgacgccgac 1101 ||||||||||||| ||||||| |||||| |||| Sbjct: 127620 tccaactacgacctcatcaacctcgacgacgac 127588
>dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A04 Length = 141079 Score = 99.6 bits (50), Expect = 4e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 1501 gtggtgctgcagatcgtgccgtgggggaacatggactggatggcgaccaacttctacggg 1560 |||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 35282 gtggtggtgcagatcgtgccgtgggggaggatggagtggatggcgaccaacttctacggc 35223 Query: 1561 cagccggcgcgggagatgcagctccggtacgtggagtactacgtgg 1606 ||||||| || ||| ||||| |||||||||||||| |||||| Sbjct: 35222 gcgccggcggcggccatggagctcaggtacgtggagtaccacgtgg 35177 Score = 52.0 bits (26), Expect = 0.008 Identities = 38/42 (90%) Strand = Plus / Minus Query: 1438 gacgtgctgctggcggtgcacggcgccgggctgacgaaccag 1479 ||||||||| ||| || |||||||||||||||||||||||| Sbjct: 35345 gacgtgctggtgggcgtccacggcgccgggctgacgaaccag 35304 Score = 50.1 bits (25), Expect = 0.033 Identities = 73/89 (82%) Strand = Plus / Minus Query: 857 cggcggccgcgccgcagtgcacgaagaagcaccgcgtgccggcggtggtgttctccgtgg 916 |||||| |||||||| ||||||| | |||| |||||| || |||| ||||||| | | Sbjct: 26666 cggcgggcgcgccgcggtgcacgcgggcgcacgacgtgcccgccgtggcgttctccatcg 26607 Query: 917 ccgggtacacggacaacttcttccacgac 945 ||||||||||| |||| ||||||||||| Sbjct: 26606 gcgggtacacgggcaacatcttccacgac 26578 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1453 gtgcacggcgccgggctgacgaac 1476 |||||||||||||||||||||||| Sbjct: 47438 gtgcacggcgccgggctgacgaac 47415 Score = 46.1 bits (23), Expect = 0.52 Identities = 38/42 (90%), Gaps = 2/42 (4%) Strand = Plus / Minus Query: 1309 cgcggcggcac--gcggaagctgctgaacctggaggaggtgg 1348 ||||||||||| |||||||||| ||||| |||||||||||| Sbjct: 41259 cgcggcggcacccgcggaagctgatgaacgtggaggaggtgg 41218 Score = 42.1 bits (21), Expect = 8.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 1069 tccaactacgaccccatcaacttcgacgccgac 1101 ||||||||||||| ||||||| |||||| |||| Sbjct: 59266 tccaactacgacctcatcaacctcgacgacgac 59234
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 83.8 bits (42), Expect = 2e-12 Identities = 111/134 (82%) Strand = Plus / Minus Query: 1438 gacgtgctgctggcggtgcacggcgccgggctgacgaaccagatcttcctgccgacgcag 1497 ||||||||| |||||||||||||||| || || || ||||| | ||||| ||| ||| | Sbjct: 8312 gacgtgctggtggcggtgcacggcgcgggcctcaccaaccaagtgttcctcccggcgcgg 8253 Query: 1498 gcagtggtgctgcagatcgtgccgtgggggaacatggactggatggcgaccaacttctac 1557 || |||||| ||||||||||||||| ||| ||||| |||||||| || ||||||||| Sbjct: 8252 gccgtggtggtgcagatcgtgccgttgggcgggatggagtggatggccacgaacttctac 8193 Query: 1558 gggcagccggcgcg 1571 || |||||||||| Sbjct: 8192 ggcgagccggcgcg 8179 Score = 61.9 bits (31), Expect = 9e-06 Identities = 106/131 (80%) Strand = Plus / Minus Query: 1438 gacgtgctgctggcggtgcacggcgccgggctgacgaaccagatcttcctgccgacgcag 1497 ||||||||| ||||||||||||| || || ||||| |||||| | ||||| || | | | Sbjct: 12107 gacgtgctggtggcggtgcacggtgcgggcctgaccaaccaggtgttcctccctgcacgg 12048 Query: 1498 gcagtggtgctgcagatcgtgccgtgggggaacatggactggatggcgaccaacttctac 1557 || |||||| |||||||| |||||| || ||||| |||||||| |||||||||||| Sbjct: 12047 gccgtggtggtgcagatcctgccgttggacgggatggagtggatggccaccaacttctac 11988 Query: 1558 gggcagccggc 1568 || ||||||| Sbjct: 11987 ggtgagccggc 11977 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1438 gacgtgctgctggcggtgcacggcgccgggctgac 1472 ||||||||||||| |||||||||||||||||||| Sbjct: 184471 gacgtgctgctgggcgtgcacggcgccgggctgac 184437 Score = 46.1 bits (23), Expect = 0.52 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1438 gacgtgctgctggcggtgcacggcgccgggctgac 1472 ||||||||||| | |||||||||||||||||||| Sbjct: 193879 gacgtgctgcttggcgtgcacggcgccgggctgac 193845 Score = 44.1 bits (22), Expect = 2.0 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1425 ggtgaacgcggcggacgtgctgctggcggtgcacggcgccgg 1466 ||||||||| || |||||||| ||| ||||||||||||||| Sbjct: 33864 ggtgaacgccgccgacgtgctcatgggggtgcacggcgccgg 33905
>emb|AJ867400.1| Sorghum bicolor mRNA for glycosyltransferase (a3 gene) Length = 2019 Score = 61.9 bits (31), Expect = 9e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1438 gacgtgctgctggcggtgcacggcgccgggctgacgaac 1476 ||||||||||||| |||||||||||||||||||||||| Sbjct: 1435 gacgtgctgctgggcgtgcacggcgccgggctgacgaac 1473
>ref|NM_001053259.1| Oryza sativa (japonica cultivar-group) Os02g0331200 (Os02g0331200) mRNA, complete cds Length = 2750 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 1422 gctggtgaacgcggcggacgtgctgctggcggtgcacggcgccgggctgac 1472 |||||||||| ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1414 gctggtgaactcggcggacgtgatggtgggcgtgcacggcgcagggctgac 1464
>emb|AJ867404.1| Triticum aestivum partial mRNA for glycosyltransferase (a4 gene) Length = 1425 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 1422 gctggtgaacgcggcggacgtgctgctggcggtgcacggcgccgggctgac 1472 |||||||||| ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 926 gctggtgaactcggcggacgtgatggtgggcgtgcacggcgcggggctgac 976
>dbj|AP005865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0037J12 Length = 118553 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 1422 gctggtgaacgcggcggacgtgctgctggcggtgcacggcgccgggctgac 1472 |||||||||| ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 11788 gctggtgaactcggcggacgtgatggtgggcgtgcacggcgcagggctgac 11838
>dbj|AP004177.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_E03 Length = 126845 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 1422 gctggtgaacgcggcggacgtgctgctggcggtgcacggcgccgggctgac 1472 |||||||||| ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 82412 gctggtgaactcggcggacgtgatggtgggcgtgcacggcgcagggctgac 82462
>dbj|AK103231.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123E06, full insert sequence Length = 2101 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 1422 gctggtgaacgcggcggacgtgctgctggcggtgcacggcgccgggctgac 1472 |||||||||| ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1420 gctggtgaactcggcggacgtgatggtgggcgtgcacggcgcagggctgac 1470
>dbj|AK100151.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015H06, full insert sequence Length = 2751 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 1422 gctggtgaacgcggcggacgtgctgctggcggtgcacggcgccgggctgac 1472 |||||||||| ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1415 gctggtgaactcggcggacgtgatggtgggcgtgcacggcgcagggctgac 1465
>dbj|AK063938.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-D12, full insert sequence Length = 2105 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 1422 gctggtgaacgcggcggacgtgctgctggcggtgcacggcgccgggctgac 1472 |||||||||| ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1172 gctggtgaactcggcggacgtgatggtgggcgtgcacggcgcagggctgac 1222
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Minus Query: 1438 gacgtgctgctggcggtgcacggcgccgggctgac 1472 ||||||||||||| |||||||||||||||||||| Sbjct: 119757 gacgtgctgctgggcgtgcacggcgccgggctgac 119723 Score = 46.1 bits (23), Expect = 0.52 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1438 gacgtgctgctggcggtgcacggcgccgggctgac 1472 ||||||||||| | |||||||||||||||||||| Sbjct: 145121 gacgtgctgcttggcgtgcacggcgccgggctgac 145087
>gb|AF525024.1| Hordeum vulgare subsp. vulgare HGA6 (HGA6) gene, complete cds Length = 2692 Score = 52.0 bits (26), Expect = 0.008 Identities = 62/74 (83%) Strand = Plus / Plus Query: 872 agtgcacgaagaagcaccgcgtgccggcggtggtgttctccgtggccgggtacacggaca 931 ||||||| | || |||| |||||||||||||| |||||| | | ||||||||||| || Sbjct: 1779 agtgcaccaggacgcacggcgtgccggcggtgacgttctcgatcggcgggtacacgggca 1838 Query: 932 acttcttccacgac 945 || ||||||||||| Sbjct: 1839 acatcttccacgac 1852 Score = 46.1 bits (23), Expect = 0.52 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1438 gacgtgctgctggcggtgcacggcgccgggctgac 1472 ||||||||| ||| |||||||||||||||||||| Sbjct: 2354 gacgtgctggtgggcgtgcacggcgccgggctgac 2388
>emb|AJ867399.1| Triticum aestivum mRNA for glycosyltransferase (a3b gene) Length = 1970 Score = 52.0 bits (26), Expect = 0.008 Identities = 59/70 (84%) Strand = Plus / Plus Query: 1425 ggtgaacgcggcggacgtgctgctggcggtgcacggcgccgggctgacgaaccagatctt 1484 ||||||||| || |||||||| ||| ||||||||||||||| || || ||| | |||| Sbjct: 1405 ggtgaacgccgccgacgtgctcatgggggtgcacggcgccggcctcaccaactcgctctt 1464 Query: 1485 cctgccgacg 1494 |||||||||| Sbjct: 1465 cctgccgacg 1474
>ref|NM_001048395.1| Oryza sativa (japonica cultivar-group) Os01g0118400 (Os01g0118400) mRNA, complete cds Length = 1569 Score = 50.1 bits (25), Expect = 0.033 Identities = 73/89 (82%) Strand = Plus / Plus Query: 857 cggcggccgcgccgcagtgcacgaagaagcaccgcgtgccggcggtggtgttctccgtgg 916 |||||| |||||||| ||||||| | |||| |||||| || |||| ||||||| | | Sbjct: 620 cggcgggcgcgccgcggtgcacgcgggcgcacgacgtgcccgccgtggcgttctccatcg 679 Query: 917 ccgggtacacggacaacttcttccacgac 945 ||||||||||| |||| ||||||||||| Sbjct: 680 gcgggtacacgggcaacatcttccacgac 708
>gb|AE005771.1| Caulobacter crescentus CB15 section 97 of 359 of the complete genome Length = 10665 Score = 50.1 bits (25), Expect = 0.033 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1001 tgcagctgctgatcaccaactacaagccg 1029 ||||| ||||||||||||||||||||||| Sbjct: 978 tgcagatgctgatcaccaactacaagccg 950
>emb|AJ867401.1| Sorghum bicolor mRNA for glycosyltransferase (a4 gene) Length = 1476 Score = 50.1 bits (25), Expect = 0.033 Identities = 49/57 (85%) Strand = Plus / Plus Query: 1413 gttcgcggcgctggtgaacgcggcggacgtgctgctggcggtgcacggcgccgggct 1469 ||||||| |||||||||| ||||||||||| || ||| || |||||||||||||| Sbjct: 1083 gttcgcgcggctggtgaactcggcggacgtgatggtgggcgtccacggcgccgggct 1139
>gb|AY108080.1| Zea mays PCO130385 mRNA sequence Length = 855 Score = 50.1 bits (25), Expect = 0.033 Identities = 40/45 (88%) Strand = Plus / Plus Query: 1425 ggtgaacgcggcggacgtgctgctggcggtgcacggcgccgggct 1469 ||||||||| | |||||||||| ||| ||||||||||||||||| Sbjct: 198 ggtgaacgccgtggacgtgctggtgggcgtgcacggcgccgggct 242
>emb|CT833269.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA228I08, full insert sequence Length = 2174 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1453 gtgcacggcgccgggctgacgaac 1476 |||||||||||||||||||||||| Sbjct: 1611 gtgcacggcgccgggctgacgaac 1634
>ref|NM_001073002.1| Oryza sativa (japonica cultivar-group) Os12g0238900 (Os12g0238900) mRNA, partial cds Length = 1832 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1453 gtgcacggcgccgggctgacgaac 1476 |||||||||||||||||||||||| Sbjct: 1301 gtgcacggcgccgggctgacgaac 1324
>ref|NM_001068901.1| Oryza sativa (japonica cultivar-group) Os08g0537600 (Os08g0537600) mRNA, complete cds Length = 3290 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1338 ggaggaggtggcggccgccgcggaggag 1365 ||||||||||||||| |||||||||||| Sbjct: 121 ggaggaggtggcggcggccgcggaggag 148
>ref|NM_001063071.1| Oryza sativa (japonica cultivar-group) Os06g0102800 (Os06g0102800) mRNA, complete cds Length = 4028 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1830 gggttggggttggggttggtgatg 1853 |||||||||||||||||||||||| Sbjct: 309 gggttggggttggggttggtgatg 286
>ref|NM_001048398.1| Oryza sativa (japonica cultivar-group) Os01g0119000 (Os01g0119000) mRNA, complete cds Length = 1791 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1453 gtgcacggcgccgggctgacgaac 1476 |||||||||||||||||||||||| Sbjct: 1232 gtgcacggcgccgggctgacgaac 1255
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1453 gtgcacggcgccgggctgacgaac 1476 |||||||||||||||||||||||| Sbjct: 7668027 gtgcacggcgccgggctgacgaac 7668050
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1338 ggaggaggtggcggccgccgcggaggag 1365 ||||||||||||||| |||||||||||| Sbjct: 26872624 ggaggaggtggcggcggccgcggaggag 26872597
>emb|AL137003.12| Human DNA sequence from clone RP1-151F17 on chromosome 6 Contains the 3' end of the SCA1 gene for spinocerebellar ataxia 1n(olivopontocerebellar ataxia 1, autosomal dominant, ataxin 1), complete sequence Length = 113802 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1338 ggaggaggtggcggccgccgcggaggag 1365 |||||||| ||||||||||||||||||| Sbjct: 85435 ggaggaggcggcggccgccgcggaggag 85408
>emb|AJ867393.1| Triticum aestivum mRNA for glycosyltransferase (a2a gene) Length = 2129 Score = 48.1 bits (24), Expect = 0.13 Identities = 42/48 (87%) Strand = Plus / Plus Query: 1422 gctggtgaacgcggcggacgtgctgctggcggtgcacggcgccgggct 1469 |||||||||| ||| ||||||| || ||| ||||||||||||||||| Sbjct: 1534 gctggtgaactcggtggacgtgatgatgggcgtgcacggcgccgggct 1581
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075G19 Length = 163558 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1830 gggttggggttggggttggtgatg 1853 |||||||||||||||||||||||| Sbjct: 59293 gggttggggttggggttggtgatg 59270
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1338 ggaggaggtggcggccgccgcggaggag 1365 ||||||||||||||| |||||||||||| Sbjct: 135414 ggaggaggtggcggcggccgcggaggag 135387
>dbj|AK121123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074J24, full insert sequence Length = 3290 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1338 ggaggaggtggcggccgccgcggaggag 1365 ||||||||||||||| |||||||||||| Sbjct: 122 ggaggaggtggcggcggccgcggaggag 149
>dbj|AK109804.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-F10, full insert sequence Length = 1831 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1453 gtgcacggcgccgggctgacgaac 1476 |||||||||||||||||||||||| Sbjct: 1300 gtgcacggcgccgggctgacgaac 1323
>dbj|AK105948.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-C08, full insert sequence Length = 1791 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1453 gtgcacggcgccgggctgacgaac 1476 |||||||||||||||||||||||| Sbjct: 1232 gtgcacggcgccgggctgacgaac 1255
>dbj|AK071050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075J12, full insert sequence Length = 1688 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1453 gtgcacggcgccgggctgacgaac 1476 |||||||||||||||||||||||| Sbjct: 1129 gtgcacggcgccgggctgacgaac 1152
>dbj|AK068790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163J20, full insert sequence Length = 4027 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1830 gggttggggttggggttggtgatg 1853 |||||||||||||||||||||||| Sbjct: 310 gggttggggttggggttggtgatg 287
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0681G01, complete sequence Length = 184118 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1830 gggttggggttggggttggtgatg 1853 |||||||||||||||||||||||| Sbjct: 26145 gggttggggttggggttggtgatg 26168
>emb|AL732646.5|CNS08C9L Oryza sativa chromosome 12, . BAC OSJNBb0001P17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151024 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1453 gtgcacggcgccgggctgacgaac 1476 |||||||||||||||||||||||| Sbjct: 55420 gtgcacggcgccgggctgacgaac 55443
>gb|CP000481.1| Acidothermus cellulolyticus 11B, complete genome Length = 2443540 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Plus Query: 157 gccgcccacgcgcctcaggggct 179 ||||||||||||||||||||||| Sbjct: 2067324 gccgcccacgcgcctcaggggct 2067346
>dbj|BA000002.3| Aeropyrum pernix K1 DNA, complete genome Length = 1669696 Score = 46.1 bits (23), Expect = 0.52 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1335 cctggaggaggtggcggccgccgcggaggag 1365 |||||||||| ||||||||||||||| |||| Sbjct: 719992 cctggaggagatggcggccgccgcggcggag 720022
>ref|NM_001048397.1| Oryza sativa (japonica cultivar-group) Os01g0118700 (Os01g0118700) mRNA, complete cds Length = 2087 Score = 46.1 bits (23), Expect = 0.52 Identities = 38/42 (90%), Gaps = 2/42 (4%) Strand = Plus / Plus Query: 1309 cgcggcggcac--gcggaagctgctgaacctggaggaggtgg 1348 ||||||||||| |||||||||| ||||| |||||||||||| Sbjct: 1104 cgcggcggcacccgcggaagctgatgaacgtggaggaggtgg 1145
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1494 gcaggcagtggtgctgcagatcg 1516 ||||||||||||||||||||||| Sbjct: 3744959 gcaggcagtggtgctgcagatcg 3744981
>gb|AF399653.1|AF399653 Chlamydomonas reinhardtii Ezy2 (ezy2) gene, complete cds Length = 7480 Score = 46.1 bits (23), Expect = 0.52 Identities = 26/27 (96%) Strand = Plus / Plus Query: 130 gctgccgggcggcgccggcgacaggag 156 ||||||||||||||| ||||||||||| Sbjct: 3122 gctgccgggcggcgcgggcgacaggag 3148 Score = 46.1 bits (23), Expect = 0.52 Identities = 26/27 (96%) Strand = Plus / Plus Query: 130 gctgccgggcggcgccggcgacaggag 156 ||||||||||||||| ||||||||||| Sbjct: 3951 gctgccgggcggcgcgggcgacaggag 3977
>emb|AJ867398.1| Triticum aestivum mRNA for glycosyltransferase (a3a gene) Length = 1969 Score = 46.1 bits (23), Expect = 0.52 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1438 gacgtgctgctggcggtgcacggcgccgggctgac 1472 ||||||||||| | |||||||||||||||||||| Sbjct: 1361 gacgtgctgctcggcgtgcacggcgccgggctgac 1395
>dbj|AK070385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054L18, full insert sequence Length = 2091 Score = 46.1 bits (23), Expect = 0.52 Identities = 38/42 (90%), Gaps = 2/42 (4%) Strand = Plus / Plus Query: 1309 cgcggcggcac--gcggaagctgctgaacctggaggaggtgg 1348 ||||||||||| |||||||||| ||||| |||||||||||| Sbjct: 1107 cgcggcggcacccgcggaagctgatgaacgtggaggaggtgg 1148
>gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome Length = 5631606 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1431 cgcggcggacgtgctgctggcggtgc 1456 |||||||| ||||||||||||||||| Sbjct: 4478129 cgcggcggccgtgctgctggcggtgc 4478104
>emb|CT833259.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN015M08, full insert sequence Length = 2440 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 890 gcgtgccggcggtggtgttctc 911 |||||||||||||||||||||| Sbjct: 981 gcgtgccggcggtggtgttctc 1002
>ref|NM_001064017.1| Oryza sativa (japonica cultivar-group) Os06g0311000 (Os06g0311000) mRNA, complete cds Length = 1581 Score = 44.1 bits (22), Expect = 2.0 Identities = 43/50 (86%) Strand = Plus / Plus Query: 893 tgccggcggtggtgttctccgtggccgggtacacggacaacttcttccac 942 |||||||||||||||||||| || ||| |||| | ||||||||||||| Sbjct: 677 tgccggcggtggtgttctccacgggcggctacagcgtcaacttcttccac 726
>ref|NM_001061980.1| Oryza sativa (japonica cultivar-group) Os05g0391600 (Os05g0391600) mRNA, complete cds Length = 2602 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 890 gcgtgccggcggtggtgttctc 911 |||||||||||||||||||||| Sbjct: 1026 gcgtgccggcggtggtgttctc 1047
>gb|CP000453.1| Alkalilimnicola ehrlichei MLHE-1, complete genome Length = 3275944 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1830 gggttggggttggggttggtga 1851 |||||||||||||||||||||| Sbjct: 2346932 gggttggggttggggttggtga 2346911
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1830 gggttggggttggggttggtgatggt 1855 ||||||||||||||||||||| |||| Sbjct: 8603784 gggttggggttggggttggtgttggt 8603809
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 206 ctcggcgccggcctcctcgccg 227 |||||||||||||||||||||| Sbjct: 7406251 ctcggcgccggcctcctcgccg 7406230
>gb|BT018710.1| Zea mays clone EL01N0516D02.d mRNA sequence Length = 1691 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1413 gttcgcggcgctggtgaacgcggcggacgt 1442 ||||||||||||||||||| ||| |||||| Sbjct: 1089 gttcgcggcgctggtgaacacggtggacgt 1118
>gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1764_D01, complete sequence Length = 164709 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 890 gcgtgccggcggtggtgttctc 911 |||||||||||||||||||||| Sbjct: 52720 gcgtgccggcggtggtgttctc 52699
>gb|AC124567.4| Mus musculus BAC clone RP23-145E22 from 6, complete sequence Length = 218924 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1944 aatactggtgatggaaaaggtc 1965 |||||||||||||||||||||| Sbjct: 97630 aatactggtgatggaaaaggtc 97651
>gb|AY392419.1|AY392419S1 Streptomyces clavuligerus plasmid pSCL2 clone contig8.25-I, partial sequence Length = 3224 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 130 gctgccgggcggcgccggcgac 151 |||||||||||||||||||||| Sbjct: 2577 gctgccgggcggcgccggcgac 2598
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1440 cgtgctgctggcggtgcacggcgccg 1465 ||||||||||||||||| |||||||| Sbjct: 1129388 cgtgctgctggcggtgcccggcgccg 1129363
>dbj|AK158906.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530003G17 product:upstream transcription factor 2, full insert sequence Length = 1446 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1778 agctgcaggagtagcggcggcg 1799 |||||||||||||||||||||| Sbjct: 34 agctgcaggagtagcggcggcg 55
>dbj|AK079292.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530085K04 product:unclassifiable, full insert sequence Length = 947 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1778 agctgcaggagtagcggcggcg 1799 |||||||||||||||||||||| Sbjct: 54 agctgcaggagtagcggcggcg 33
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 890 gcgtgccggcggtggtgttctc 911 |||||||||||||||||||||| Sbjct: 18885342 gcgtgccggcggtggtgttctc 18885321
>emb|AL356796.16| Human DNA sequence from clone RP11-82I1 on chromosome 9 Contains the 3' end of a novel gene (FLJ11985, MGC11337) (KIAA0870), the ORM1 gene for orosomucoid 1 (AGP1, AGP-A), the ORM2 gene for orosomucoid 2 (AGP2, AGP-B) and the gene for AT-hook transcription factor AKNA, complete sequence Length = 125673 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 ctgtctccttcctttcttcctc 24 |||||||||||||||||||||| Sbjct: 124005 ctgtctccttcctttcttcctc 123984
>emb|AL138895.16| Human DNA sequence from clone RP11-9M16 on chromosome 9 Contains a novel gene (DKFZP434N014), a novel gene and two CpG islands, complete sequence Length = 132292 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 ctgtctccttcctttcttcctc 24 |||||||||||||||||||||| Sbjct: 332 ctgtctccttcctttcttcctc 311
>emb|AJ867397.1| Zea mays mRNA for glycosyltransferase (a2 gene) Length = 2089 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1413 gttcgcggcgctggtgaacgcggcggacgt 1442 ||||||||||||||||||| ||| |||||| Sbjct: 1489 gttcgcggcgctggtgaacacggtggacgt 1518
>gb|AC016021.3|AC016021 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone BACR27F05, complete sequence Length = 158520 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1830 gggttggggttggggttggtgatggt 1855 ||||||||||||||||||||| |||| Sbjct: 131548 gggttggggttggggttggtgttggt 131573
>gb|AC149055.6| Mus musculus BAC clone RP23-358K1 from chromosome 7, complete sequence Length = 215193 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1778 agctgcaggagtagcggcggcg 1799 |||||||||||||||||||||| Sbjct: 110996 agctgcaggagtagcggcggcg 111017
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 448 tttcccggaggaggggcctgcggtgg 473 |||||||||||||||| ||||||||| Sbjct: 995256 tttcccggaggagggggctgcggtgg 995281
>dbj|AP004583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0005N06 Length = 140639 Score = 44.1 bits (22), Expect = 2.0 Identities = 43/50 (86%) Strand = Plus / Minus Query: 893 tgccggcggtggtgttctccgtggccgggtacacggacaacttcttccac 942 |||||||||||||||||||| || ||| |||| | ||||||||||||| Sbjct: 32814 tgccggcggtggtgttctccacgggcggctacagcgtcaacttcttccac 32765
>dbj|AK110377.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-C08, full insert sequence Length = 2609 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 890 gcgtgccggcggtggtgttctc 911 |||||||||||||||||||||| Sbjct: 1026 gcgtgccggcggtggtgttctc 1047
>gb|AC104772.3| Homo sapiens BAC clone RP11-3I22 from 2, complete sequence Length = 106526 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 tctccttcctttcttcctctgc 27 |||||||||||||||||||||| Sbjct: 23149 tctccttcctttcttcctctgc 23128
>gb|AC153603.3| Mus musculus 6 BAC RP23-315I7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228174 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1944 aatactggtgatggaaaaggtc 1965 |||||||||||||||||||||| Sbjct: 28722 aatactggtgatggaaaaggtc 28743
>gb|U12282.1|MMUSF2S1 Mus musculus transcription factor USF2 (USF2) gene, exons 1-7 Length = 4352 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1778 agctgcaggagtagcggcggcg 1799 |||||||||||||||||||||| Sbjct: 1004 agctgcaggagtagcggcggcg 1025
>gb|AC140071.4| Mus musculus BAC clone RP23-394K8 from 3, complete sequence Length = 203896 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1020 ctacaagccgtggtgggtgcagaagt 1045 ||||||||| |||||||||||||||| Sbjct: 101893 ctacaagccctggtgggtgcagaagt 101918
>emb|X77602.1|MMUSF217 M.musculus USF2 gene (exons 1-7) Length = 4423 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1778 agctgcaggagtagcggcggcg 1799 |||||||||||||||||||||| Sbjct: 1455 agctgcaggagtagcggcggcg 1476
>gb|AC007453.1|AC007453 Drosophila melanogaster, chromosome 2R, region 49C1-49D3, P1 clones DS04499, DS06146, and DS00455, complete sequence Length = 145055 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1830 gggttggggttggggttggtgatggt 1855 ||||||||||||||||||||| |||| Sbjct: 16301 gggttggggttggggttggtgttggt 16326
>gb|AF047411.1|AF047411 Stenotrophomonas maltophilia chitinase gene, complete cds Length = 2030 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 912 cgtggccgggtacacggacaac 933 |||||||||||||||||||||| Sbjct: 1214 cgtggccgggtacacggacaac 1193
>ref|NM_031139.1| Rattus norvegicus upstream transcription factor 2 (Usf2), mRNA dbj|AB047556.1| Rattus norvegicus mRNA for transcription factor USF2, complete cds Length = 2171 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1778 agctgcaggagtagcggcggcg 1799 |||||||||||||||||||||| Sbjct: 321 agctgcaggagtagcggcggcg 342
>ref|XM_417018.2| PREDICTED: Gallus gallus dachshund homolog 1 (Drosophila) (DACH1), mRNA Length = 2479 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1339 gaggaggtggcggccgccgcggagg 1363 ||||||||||||||||||| ||||| Sbjct: 119 gaggaggtggcggccgccgaggagg 95
>emb|CT836284.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA053L12, full insert sequence Length = 1622 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 gaactcgacggcgtactcgcg 120 ||||||||||||||||||||| Sbjct: 601 gaactcgacggcgtactcgcg 581
>gb|CP000454.1| Arthrobacter sp. FB24, complete genome Length = 4698945 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 917 ccgggtacacggacaacttct 937 ||||||||||||||||||||| Sbjct: 2709692 ccgggtacacggacaacttct 2709712
>emb|CR855115.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0148P16, complete sequence Length = 80434 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 597 ccgccggtggggagggggcgg 617 ||||||||||||||||||||| Sbjct: 71236 ccgccggtggggagggggcgg 71256
>emb|CR855097.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0075F02, complete sequence Length = 86134 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 597 ccgccggtggggagggggcgg 617 ||||||||||||||||||||| Sbjct: 13868 ccgccggtggggagggggcgg 13888
>ref|NM_001048399.1| Oryza sativa (japonica cultivar-group) Os01g0119100 (Os01g0119100) mRNA, complete cds Length = 2022 Score = 42.1 bits (21), Expect = 8.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1069 tccaactacgaccccatcaacttcgacgccgac 1101 ||||||||||||| ||||||| |||||| |||| Sbjct: 1264 tccaactacgacctcatcaacctcgacgacgac 1296
>gb|CP000442.1| Burkholderia cepacia AMMD chromosome 3, complete sequence Length = 1281472 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1382 cggtggcggaggcgggggcgg 1402 ||||||||||||||||||||| Sbjct: 1094216 cggtggcggaggcgggggcgg 1094236
>gb|DQ898639.1| Sinorhizobium meliloti strain 41 pSymB megaplasmid B316 genomic sequence Length = 5097 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1462 gccgggctgacgaaccagatc 1482 ||||||||||||||||||||| Sbjct: 3963 gccgggctgacgaaccagatc 3983
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1409 cggcgttcgcggcgctggtgaacgcggcg 1437 ||||||||||||||| | ||||||||||| Sbjct: 5985778 cggcgttcgcggcgcggatgaacgcggcg 5985750
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1814 cgtccccggcccgcccgggttgggg 1838 |||||||||| |||||||||||||| Sbjct: 969669 cgtccccggcgcgcccgggttgggg 969693 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1089 cttcgacgccgacgccggggtgcac 1113 ||||||||||||||||| ||||||| Sbjct: 2992595 cttcgacgccgacgccgaggtgcac 2992571
>ref|XM_984034.1| PREDICTED: Mus musculus hypothetical protein LOC670931 (LOC670931), mRNA Length = 909 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 agctgccgggcggcgccggcg 149 ||||||||||||||||||||| Sbjct: 871 agctgccgggcggcgccggcg 851
>ref|XM_980103.1| PREDICTED: Mus musculus hypothetical protein LOC675195 (LOC675195), mRNA Length = 909 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 agctgccgggcggcgccggcg 149 ||||||||||||||||||||| Sbjct: 871 agctgccgggcggcgccggcg 851
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1442 tgctgctggcggtgcacggcgccgggctg 1470 ||||||||||||||| || |||||||||| Sbjct: 2975708 tgctgctggcggtgctcgtcgccgggctg 2975680
>gb|AC182390.3| Pan troglodytes BAC clone CH251-614D4 from chromosome 17, complete sequence Length = 197192 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ctgtctccttcctttcttcct 23 ||||||||||||||||||||| Sbjct: 92376 ctgtctccttcctttcttcct 92356
>gb|AF488414.1| Pennisetum glaucum BAC 311G2 complete sequence Length = 123096 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 ctccttcctttcttcctctgc 27 ||||||||||||||||||||| Sbjct: 105433 ctccttcctttcttcctctgc 105453
>gb|AY693797.1| Saccharum officinarum clone SCEZRZ1015G07 CENP-C1 mRNA, complete cds Length = 2402 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1382 cggtggcggaggcgggggcgg 1402 ||||||||||||||||||||| Sbjct: 180 cggtggcggaggcgggggcgg 160
>gb|AY693795.1| Saccharum officinarum clone SCBFAD1047C06 CENP-C1 mRNA, complete cds Length = 2413 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1382 cggtggcggaggcgggggcgg 1402 ||||||||||||||||||||| Sbjct: 177 cggtggcggaggcgggggcgg 157
>gb|BC072029.1| Xenopus laevis hypothetical protein MGC78805, mRNA (cDNA clone MGC:78805 IMAGE:3402346), complete cds Length = 1705 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ctgtctccttcctttcttcct 23 ||||||||||||||||||||| Sbjct: 69 ctgtctccttcctttcttcct 49
>gb|AC147656.3| Pan troglodytes BAC clone CH251-505H4 from Y, complete sequence Length = 238079 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 tgtctccttcctttcttcctc 24 ||||||||||||||||||||| Sbjct: 82745 tgtctccttcctttcttcctc 82765
>gb|AC147660.2| Pan troglodytes BAC clone CH251-389M10 from Y, complete sequence Length = 175868 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 tgtctccttcctttcttcctc 24 ||||||||||||||||||||| Sbjct: 93252 tgtctccttcctttcttcctc 93232
>ref|XM_549425.2| PREDICTED: Canis familiaris hypothetical LOC475262 (LOC475262), mRNA Length = 799 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 596 gccgccggtggggagggggcg 616 ||||||||||||||||||||| Sbjct: 178 gccgccggtggggagggggcg 158
>gb|AC151665.26| Medicago truncatula clone mth2-7k4, complete sequence Length = 135880 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1830 gggttggggttggggttggtg 1850 ||||||||||||||||||||| Sbjct: 102073 gggttggggttggggttggtg 102053
>gb|AC174354.6| Medicago truncatula clone mth2-8m12, complete sequence Length = 122859 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1830 gggttggggttggggttggtg 1850 ||||||||||||||||||||| Sbjct: 93407 gggttggggttggggttggtg 93387
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 816 gcccgccgtggtggaggtgaccgtg 840 |||||||||||||| |||||||||| Sbjct: 4411989 gcccgccgtggtggcggtgaccgtg 4411965
>gb|AC161231.7| Mus musculus chromosome 5, clone RP24-241P24, complete sequence Length = 193682 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1830 gggttggggttggggttggtg 1850 ||||||||||||||||||||| Sbjct: 30903 gggttggggttggggttggtg 30923
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 ctcggcgccggcctcctcgcc 226 ||||||||||||||||||||| Sbjct: 2017180 ctcggcgccggcctcctcgcc 2017200
>gb|AC161348.2| Mus musculus chromosome 5, clone RP23-393E10, complete sequence Length = 221768 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1830 gggttggggttggggttggtg 1850 ||||||||||||||||||||| Sbjct: 12508 gggttggggttggggttggtg 12488
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1406 tgccggcgttcgcggcgctgg 1426 ||||||||||||||||||||| Sbjct: 836092 tgccggcgttcgcggcgctgg 836072
>gb|AC079327.3| Homo sapiens chromosome 18, clone RP11-240N5, complete sequence Length = 165642 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ctgtctccttcctttcttcct 23 ||||||||||||||||||||| Sbjct: 57314 ctgtctccttcctttcttcct 57334
>emb|CR663459.2|CNS0FAW9 Tetraodon nigroviridis full-length cDNA Length = 1130 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1341 ggaggtggcggccgccgcggaggag 1365 ||||| ||||||||||||||||||| Sbjct: 224 ggaggaggcggccgccgcggaggag 200
>gb|AC010252.4| Homo sapiens chromosome 5 clone CTC-428I3, complete sequence Length = 209112 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1830 gggttggggttggggttggtgatgg 1854 ||||||||||||||||||| ||||| Sbjct: 97460 gggttggggttggggttggggatgg 97436
>gb|AC146250.5| Pan troglodytes BAC clone CH251-148B21 from chromosome y, complete sequence Length = 175351 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 tgtctccttcctttcttcctc 24 ||||||||||||||||||||| Sbjct: 111290 tgtctccttcctttcttcctc 111270
>emb|AL033519.42|HS340B19 Human DNA sequence from clone RP3-340B19 on chromosome 6p21.2-21.3 Contains the TULP1 gene for tubby like protein 1, a novel gene, ribosomal protein S15A (RPS15A) and L36 (RPL36) pseudogenes, the 3' end of the FKBP5 gene for FK506 binding protein 5 (FKBP51) and two CpG islands, complete sequence Length = 178985 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1830 gggttggggttggggttggtg 1850 ||||||||||||||||||||| Sbjct: 16069 gggttggggttggggttggtg 16049
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1792 cggcggcgccgtacgtcgtct 1812 ||||||||||||||||||||| Sbjct: 35868 cggcggcgccgtacgtcgtct 35848
>gb|AE016855.1| Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000A, complete sequence Length = 73661 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1047 cacgccggtgctgcgcaagctgtcc 1071 ||||||||||||| ||||||||||| Sbjct: 54885 cacgccggtgctgggcaagctgtcc 54909
>emb|BX927313.11| Zebrafish DNA sequence from clone CH211-12A1 in linkage group 18, complete sequence Length = 189797 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1830 gggttggggttggggttggtg 1850 ||||||||||||||||||||| Sbjct: 176416 gggttggggttggggttggtg 176396
>dbj|AP006050.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021H05 Length = 159111 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 gaactcgacggcgtactcgcg 120 ||||||||||||||||||||| Sbjct: 82167 gaactcgacggcgtactcgcg 82187
>dbj|AP003724.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0498C03 Length = 146394 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 ggcgccgccggtggggagggg 613 ||||||||||||||||||||| Sbjct: 23265 ggcgccgccggtggggagggg 23245
>dbj|AP003630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0566A10 Length = 174367 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 593 ggcgccgccggtggggagggg 613 ||||||||||||||||||||| Sbjct: 164555 ggcgccgccggtggggagggg 164535
>dbj|BS000579.1| Pan troglodytes chromosome Y clone:PTBY-008N05, complete sequences Length = 104026 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 tgtctccttcctttcttcctc 24 ||||||||||||||||||||| Sbjct: 75387 tgtctccttcctttcttcctc 75367
>ref|XM_950709.1| Neurospora crassa OR74A hypothetical protein (NCU00059.1) partial mRNA Length = 2490 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1830 gggttggggttggggttggtg 1850 ||||||||||||||||||||| Sbjct: 1469 gggttggggttggggttggtg 1449
>gb|AC132812.9| Homo sapiens chromosome 17, clone RP13-104F24, complete sequence Length = 161139 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ctgtctccttcctttcttcct 23 ||||||||||||||||||||| Sbjct: 38888 ctgtctccttcctttcttcct 38908
>gb|AC134985.11| Mus musculus chromosome 5, clone RP24-432L3, complete sequence Length = 199782 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1830 gggttggggttggggttggtg 1850 ||||||||||||||||||||| Sbjct: 91482 gggttggggttggggttggtg 91502
>gb|AF034919.1|HSTULP1S01 Homo sapiens tubby like protein 1 (TULP1) gene, exons 1-8 Length = 4717 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1830 gggttggggttggggttggtg 1850 ||||||||||||||||||||| Sbjct: 1087 gggttggggttggggttggtg 1107
>dbj|AP006130.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT36O13, TM0226, complete sequence Length = 140838 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1830 gggttggggttggggttggtgatgg 1854 ||||||||||||||||||| ||||| Sbjct: 134762 gggttggggttggggttggggatgg 134786
>dbj|AP004467.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06K11, TM0002, complete sequence Length = 106023 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1831 ggttggggttggggttggtgatggt 1855 |||||||||||||||||||| |||| Sbjct: 75743 ggttggggttggggttggtggtggt 75767
>gb|AC007632.4|AC007632 Homo sapiens clone R529C19B from chromosome 18, complete sequence Length = 205959 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ctgtctccttcctttcttcct 23 ||||||||||||||||||||| Sbjct: 201053 ctgtctccttcctttcttcct 201033
>emb|AJ563452.1|TAE563452 Triticum aestivum agp2 gene for ADP-glucose pyrophosphorylase large subunit Length = 7725 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 849 cccgtccccggcggccgcgccgcag 873 |||||||||||| |||||||||||| Sbjct: 2999 cccgtccccggcagccgcgccgcag 3023
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 407 ttcatcggccgcgagaacgacaacg 431 |||||||||| |||||||||||||| Sbjct: 2581759 ttcatcggccacgagaacgacaacg 2581735
>gb|AC003663.1|AC003663 Homo sapiens chromosome 17, clone HCIT87G17, complete sequence Length = 132070 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ctgtctccttcctttcttcct 23 ||||||||||||||||||||| Sbjct: 101434 ctgtctccttcctttcttcct 101454
>emb|AL772285.9| Mouse DNA sequence from clone RP23-76I24 on chromosome 4, complete sequence Length = 153899 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1495 caggcagtggtgctgcagatc 1515 ||||||||||||||||||||| Sbjct: 62784 caggcagtggtgctgcagatc 62764
>gb|AE016854.1| Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B, complete sequence Length = 67473 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1047 cacgccggtgctgcgcaagctgtcc 1071 ||||||||||||| ||||||||||| Sbjct: 50500 cacgccggtgctgggcaagctgtcc 50524
>emb|AL731554.13| Mouse DNA sequence from clone RP23-337H1 on chromosome 5, complete sequence Length = 159200 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 agctgccgggcggcgccggcg 149 ||||||||||||||||||||| Sbjct: 14439 agctgccgggcggcgccggcg 14459 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 261,304,642 Number of extensions: 15675207 Number of successful extensions: 119946 Number of sequences better than 10.0: 140 Number of HSP's gapped: 119893 Number of HSP's successfully gapped: 209 Length of query: 2107 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2084 Effective length of database: 18,503,978,556 Effective search space: 38562291310704 Effective search space used: 38562291310704 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
