ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf64l19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os01g0173000:Os01g0173000 223 1e-58
2Os06g0237100:Os06g0237100 68 6e-12
3AK071517:Os04g0561900 30 1.4
4AK070790:Os04g0561900 30 1.4
5AK065329:Os06g0661900 29 4.1
6AK106998:Os08g0425500 28 5.3
7AK066174:Os06g0166100 28 6.9
8Os07g0260000:Os07g0260000 28 9.1

>Os01g0173000:Os01g0173000 |
          Length = 194
 Score =  223 bits (567), Expect = 1e-58
 Identities = 111/140 (79%), Positives = 116/140 (82%)
 Frame = +3

Query: 189 EPVKAATDAEFFQPSDTRPIMLFDGVCNLCNGGVRFVREHDPGRSIRYIPLQXXXXXXXX 368
           + VKAATDAEFFQ SDTRPIMLFDGVCNLCNGGVRFV+EHDP RSIRYIPLQ        
Sbjct: 55  QSVKAATDAEFFQTSDTRPIMLFDGVCNLCNGGVRFVQEHDPNRSIRYIPLQSESGRKLL 114

Query: 369 XXXXXXPDDISSVVLVEKDRSYIKSDAVLRIMEYLNLPFPQLAALLKIAPLFVRDFAYDN 548
                 PDDISSVVLVEKDRSYIKS+AVLRIM YLNLPFPQLA  L   PLF+RDFAYDN
Sbjct: 115 QRSGRAPDDISSVVLVEKDRSYIKSEAVLRIMGYLNLPFPQLATFLNFVPLFLRDFAYDN 174

Query: 549 VADNRYVVFGRSETESCEIL 608
           VADNRY VFGRSE+ESCEIL
Sbjct: 175 VADNRYAVFGRSESESCEIL 194



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>Os06g0237100:Os06g0237100 |
          Length = 209

 Score = 68.2 bits (165), Expect = 6e-12
 Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
 Frame = +3

Query: 201 AATDAEFFQPSDTRPIMLFDGVCNLCNGGVRFVREHDPGRSIRYIPLQXXXXXXXXXXXX 380
           AAT     QP     ++++DGVC+LC+ GV++V + D    IR+  +Q            
Sbjct: 55  AATAPTVLQPR----VLIYDGVCHLCHRGVKWVIKADKHAKIRFCCVQSKAAEPYLRLVG 110

Query: 381 XXPDDI-SSVVLVEKDRSYIK-SDAVLRIMEYLNLPFPQLAALLKIAPLFVRDFAYDNVA 554
              +D+   V+ +E   +Y + S A L++  YL LP+  L++LL I P  +RD  YD +A
Sbjct: 111 MDREDVLRRVLFIEGPEAYYEGSTAALKVASYLPLPYSALSSLL-IIPAPLRDAIYDYIA 169

Query: 555 DNRYVVFGRSE 587
            NRY  FG+ +
Sbjct: 170 KNRYDWFGKDD 180



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>AK071517:Os04g0561900 |
          Length = 554

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = -1

Query: 658 TYNISKSTEVLSVAAIQSISHDSVSDRPKTTYRLSATLS*AKSLTNRGAILRSAAS 491
           T+ +  +   L V A QS+S    ++RP   Y+++ +   AK   N  A+LR A S
Sbjct: 245 THTVQNTYSSLYVHAGQSLSVLFTANRPPGVYQITVSTRFAKRALNSSAVLRYAGS 300



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>AK070790:Os04g0561900 |
          Length = 554

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = -1

Query: 658 TYNISKSTEVLSVAAIQSISHDSVSDRPKTTYRLSATLS*AKSLTNRGAILRSAAS 491
           T+ +  +   L V A QS+S    ++RP   Y+++ +   AK   N  A+LR A S
Sbjct: 245 THTVQNTYSSLYVHAGQSLSVLFTANRPPGVYQITVSTRFAKRALNSSAVLRYAGS 300



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>AK065329:Os06g0661900 |
          Length = 382

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -2

Query: 102 GSSCSSSFRPWLPSSARQQLHCSPLLSSPLVRSI 1
           GS   ++F+ WLPS  R++     ++SS ++R I
Sbjct: 52  GSGACATFKDWLPSVTRRERTDEEIISSVVLRDI 85



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>AK106998:Os08g0425500 |
          Length = 414

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 222 FQPSDTRPIM-LFDGVCNLCNGGVRFVREHDPGRSIRYIPL 341
           ++ SD RP+  LFD VC L  GGV          S  ++PL
Sbjct: 373 YRISDHRPVRALFDAVCELAGGGVGVEHSAAGIASFGHVPL 413



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>AK066174:Os06g0166100 |
          Length = 780

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = -1

Query: 619 AAIQSISHDSVSDRPKTTYRLSA-TLS*AKSLTNRGAILRSAASCGNGRLRYSIILSTAS 443
           A +++I H +V  +   +Y      L  A+ L   GA     +SCG   LR+ I +    
Sbjct: 480 APVRAIKHSTVLKQAAESYTHKIYKLFEAEFLDGCGATSCHESSCGGNLLRFEITMQGRG 539

Query: 442 DLMYDLSFSTRTTLEMSSGLLPDRRRSFL 356
             ++ +   T +T+E+S G     R   L
Sbjct: 540 SKVWTVLLDT-STMEISCGCRKFERMGLL 567



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>Os07g0260000:Os07g0260000 |
          Length = 750

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
 Frame = -1

Query: 409 TTLEMSSGLLP-------DRRRSFLPESLWRGMYLMLLPGSCSRTNRTPPLQRL 269
           TT+ M  G LP       +  RSF  ++  RG+ L+    SC R  +  PL +L
Sbjct: 608 TTVNMGKGDLPIVLQLYQEDHRSFDHQAAVRGLKLISPSNSCQRWEQGQPLDKL 661


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 16,196,334
Number of extensions: 315553
Number of successful extensions: 1213
Number of sequences better than 10.0: 8
Number of HSP's gapped: 1212
Number of HSP's successfully gapped: 8
Length of query: 255
Length of database: 15,399,855
Length adjustment: 98
Effective length of query: 157
Effective length of database: 11,475,837
Effective search space: 1801706409
Effective search space used: 1801706409
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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