>Q9SSR1:Y1259_ARATH DCC family protein At1g52590, chloroplast precursor - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 172
 Score =  168 bits (425), Expect = 2e-41
 Identities = 85/131 (64%), Positives = 101/131 (77%)
 Frame = +3

Query: 213 AEFFQPSDTRPIMLFDGVCNLCNGGVRFVREHDPGRSIRYIPLQXXXXXXXXXXXXXXPD 392
           + FF+  D RPIMLFDGVCNLCNGGV+FVR+HD  RSIR+  LQ              PD
Sbjct: 45  SSFFE-EDKRPIMLFDGVCNLCNGGVKFVRDHDRNRSIRFEALQSEAGKKLLLRSGRAPD 103

Query: 393 DISSVVLVEKDRSYIKSDAVLRIMEYLNLPFPQLAALLKIAPLFVRDFAYDNVADNRYVV 572
           DISSVVLVE DRSYIKS+AVL+IM+Y++LPFPQLA  L+ APLFVRDF Y+NVA+NRY +
Sbjct: 104 DISSVVLVENDRSYIKSEAVLKIMKYIDLPFPQLAFFLQFAPLFVRDFLYENVANNRYAM 163

Query: 573 FGRSETESCEI 605
           FGRS  +SCE+
Sbjct: 164 FGRS--DSCEL 172

>P40761:YUXK_BACSU Uncharacterized protein yuxK - Bacillus subtilis|
          Length = 137

 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 41/112 (36%), Positives = 57/112 (50%)
 Frame = +3

Query: 246 IMLFDGVCNLCNGGVRFVREHDPGRSIRYIPLQXXXXXXXXXXXXXXPDDISSVVLVEKD 425
           ++LFDGVCNLCNG V+F+ + DP   I +  LQ               D   S V +E  
Sbjct: 10  VLLFDGVCNLCNGAVQFIIKRDPDGLISFTSLQSETGQSLLKKSGLPTDRFDSFVFIEDG 69

Query: 426 RSYIKSDAVLRIMEYLNLPFPQLAALLKIAPLFVRDFAYDNVADNRYVVFGR 581
           + Y KS A +++  +L  P+ +L  L    P  VRD  Y  +A NRY  FG+
Sbjct: 70  QVYTKSTAAIKVFRHLRGPW-RLFVLFFAVPKPVRDMVYSFIAKNRYKWFGK 120

>Q2JV84:RL2_SYNJA 50S ribosomal protein L2 - Synechococcus sp. (strain JA-3-3Ab)|
           (Cyanobacteria bacterium Yellowstone A-Prime)
          Length = 294

 Score = 33.5 bits (75), Expect = 0.93
 Identities = 35/133 (26%), Positives = 53/133 (39%), Gaps = 9/133 (6%)
 Frame = -1

Query: 640 STEVLSVAAIQSISHDSVSDRPKTTYRLSATLS*AKSLTNRGAILRSAASCGNGRLRYSI 461
           ST  ++V+  + +S D    RP+    L   +   K   NRG I       G+ RL   I
Sbjct: 12  STRHMTVSNFEELSRDENGKRPRPEKSLLQFIHRKKGRNNRGVITCRHRGGGHKRLYRII 71

Query: 460 --------ILSTASDLMYDLSFSTRTTL-EMSSGLLPDRRRSFLPESLWRGMYLMLLPGS 308
                   I +T   + YD + S R  L E   G   ++R    P +L  G  +M  P +
Sbjct: 72  DFRRDKRGIPATVKTIEYDPNRSARICLVEYEDG---EKRYILAPRNLEVGATIMAGPDA 128

Query: 307 CSRTNRTPPLQRL 269
                   PL+R+
Sbjct: 129 PFELGNAMPLERI 141

>Q2JIM4:RL2_SYNJB 50S ribosomal protein L2 - Synechococcus sp. (strain|
           JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone
           B-Prime)
          Length = 294

 Score = 30.8 bits (68), Expect = 6.0
 Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 9/133 (6%)
 Frame = -1

Query: 640 STEVLSVAAIQSISHDSVSDRPKTTYRLSATLS*AKSLTNRGAILRSAASCGNGRLRYSI 461
           ST  ++V+  + +S D    RP+    L   +   K   NRG I       G+ RL   I
Sbjct: 12  STRHMTVSDFEELSRDENGKRPRPEKSLLQFIHRKKGRNNRGVITCRHRGGGHKRLYRII 71

Query: 460 --------ILSTASDLMYDLSFSTRTTL-EMSSGLLPDRRRSFLPESLWRGMYLMLLPGS 308
                   I  T   + YD + S    L E   G   ++R    P +L  G  +M  P +
Sbjct: 72  DFRRDKRGIPGTVKTVEYDPNRSAHICLVEYEDG---EKRYILAPRNLQVGSTIMAGPEA 128

Query: 307 CSRTNRTPPLQRL 269
                   PL+R+
Sbjct: 129 PFEIGNAMPLERI 141


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 97,208,306
Number of extensions: 1816046
Number of successful extensions: 5873
Number of sequences better than 10.0: 4
Number of HSP's gapped: 5866
Number of HSP's successfully gapped: 4
Length of query: 255
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 144
Effective length of database: 70,239,694
Effective search space: 10114515936
Effective search space used: 10114515936
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)