ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf63a01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK241015.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065054A13, full insert sequence Length = 2168 Score = 505 bits (255), Expect = e-139 Identities = 414/467 (88%) Strand = Plus / Plus Query: 852 gtggcgaacaatgctttatgcagcatgtgtgcctggttttttcattgttgttggaatgca 911 |||||| |||||||||||||| |||||||| |||||| || | ||||||| ||||||||| Sbjct: 1001 gtggcggacaatgctttatgctgcatgtgtacctggtgttcttattgttgctggaatgca 1060 Query: 912 attcgccgttgagagtccacgctggcttgccaaggttgggagattagatgatgccagaaa 971 ||| || ||||||||||| |||||||||||||||||||| ||| |||||||||||||||| Sbjct: 1061 atttgctgttgagagtccccgctggcttgccaaggttggaagaatagatgatgccagaaa 1120 Query: 972 agtggtagagaatatttggggagtttctgaagcggagaaggccatggaagaaatgaaatc 1031 || ||||| || |||||||| |||||||| |||||| |||||||||| || |||| Sbjct: 1121 tgttgtagaacatgtttggggaccttctgaagttgagaagtccatggaagagatccaatc 1180 Query: 1032 tgttgttgcgaatgatgattcacaggctagctggtcagaacttctggcggaaccccacaa 1091 ||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 1181 tgttgttgcaaatgatgattcgcaggctagctggtcagaacttctggaagaaccccacaa 1240 Query: 1092 tagagttgcattgattggagggtcactgttctttctgcaacagtttgctggaataaatgg 1151 |||||||||| ||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 1241 tagagttgcactgattggagggtcccttttctttctgcaacagtttgctggcataaatgg 1300 Query: 1152 tgttctctatttttcatcattaacattccgtgatgttggtattaccagtggtgttttggc 1211 ||||| || || ||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 1301 cgttctgtacttctcatcattaacattccgtgatgttggtattaccagtggtatcttggc 1360 Query: 1212 gagcttatatgttggaataaccaactttggaggggcacttgttgcttcaaatttgatgga 1271 ||| |||||||||||||||| || |||| ||||||| |||||||||||| ||||||||| Sbjct: 1361 aagcctatatgttggaataactaattttgcaggggcaattgttgcttcaattttgatgga 1420 Query: 1272 caagcaaggacggaagaatcttttgatagggagctatcttggaatgg 1318 |||||||| || ||||| || |||| ||| |||||||||||||||| Sbjct: 1421 taagcaaggtcgaaagaaactcttgacaggaagctatcttggaatgg 1467 Score = 343 bits (173), Expect = 2e-90 Identities = 332/385 (86%) Strand = Plus / Plus Query: 1350 ttgctatgttccttatagtgttttccatcagctttccccttgatgaaggcgttggacata 1409 |||| |||||||| ||||| | | |||| ||||| |||||||||||||| ||| | ||| Sbjct: 1471 ttgcaatgttcctaatagtatatgccattagcttcccccttgatgaaggagttagccatg 1530 Query: 1410 ccctctcaattaccggaactcttttgtacatttttacttttgctgttggtgctggaccag 1469 ||| |||||||| |||||||| |||||||| ||||| || || |||| || ||||||| Sbjct: 1531 gcctgtcaattactggaactctgttgtacatatttacattcgccattggagccggaccag 1590 Query: 1470 ttactggaattatcatacctgagctgagcagtgcccggacacgctcaaaagttatggggt 1529 |||| ||||| |||||||| |||||||| |||| ||||||||||| ||||||||||| | Sbjct: 1591 ttacaggaatcatcataccagagctgagtggtgctcggacacgctcgaaagttatgggct 1650 Query: 1530 tcagcttcactgtacattgggtatgtaattttctggtgggactatatttcctggagcttg 1589 |||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| Sbjct: 1651 tcagcttcactgtacattggatatgcaattttctggtgggactgtatttcctggagcttg 1710 Query: 1590 taaagtcgtttggcgtcggagcggtctatgcaggcttcggcggggtctccttgttgtccg 1649 ||| ||| ||||| ||||| ||||||||||| || || || || ||||||||||| | Sbjct: 1711 cgaagaagttaggcgttggagccgtctatgcaggttttggtggagtatccttgttgtcag 1770 Query: 1650 cacttttcgcttacaatttcatagttgagacaaaaggacgttctcttgaggaaattgaga 1709 |||||||||| ||||||||||| || ||||| ||||||||||||||||||||||| || | Sbjct: 1771 cacttttcgcctacaatttcattgtcgagacgaaaggacgttctcttgaggaaatcgaaa 1830 Query: 1710 tgtctatgagccctgctgcccctgg 1734 ||||| ||||||||||||||||||| Sbjct: 1831 tgtctttgagccctgctgcccctgg 1855 Score = 303 bits (153), Expect = 1e-78 Identities = 243/273 (89%) Strand = Plus / Plus Query: 309 agatggaggcggtgacgctgatctcgggtgggttcgggcgttccctcacgtgctcactgc 368 |||||||||||| | ||||||||||||||| | |||| |||||| ||||||||||| || Sbjct: 491 agatggaggcggcggtgctgatctcgggtggctgcgggtgttcccgcacgtgctcacggc 550 Query: 369 gtccatggccaatttcctctttggctaccacattggggtcatgaatggtccaatagagga 428 |||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 551 gtccatggccaacttcctcttcggctaccacatcggggtcatgaatggtccaatagagga 610 Query: 429 tattgcacgagagcttggttttcaaggaaatccgtttctccaaggtcttgtggtcagcat 488 ||| ||||| |||||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct: 611 tatagcacgggagcttggttttcaggggaatccatttctccaaggtcttgtggtcagcat 670 Query: 489 attcattgtcggtgcattctttgggagcttaggctcgtctgcgctagttgattatttagg 548 ||||||||| || ||||| || || ||||||||||| ||||| ||||| || |||| || Sbjct: 671 attcattgttggagcatttttcggaagcttaggctcatctgcactagtcgacaattttgg 730 Query: 549 ttgtaaaaggactcttcagattgatagtattcc 581 ||||||||||||||||| |||||||| ||||| Sbjct: 731 atgtaaaaggactcttcaaattgatagcattcc 763 Score = 222 bits (112), Expect = 4e-54 Identities = 187/212 (88%) Strand = Plus / Plus Query: 603 caggcacattcgatggatgagatgctcctgggaaggttccttgttggcattggaattggc 662 |||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 792 caggcagattcgttggatgagatgctcttgggaagattccttgttggcattggaattggc 851 Query: 663 gtgaataccgtgcttgttccaatatatatctctgaggttgctccaacaaaatacagaggc 722 | ||||| ||||| |||||| ||||| |||| ||||||||||||||||||||||| || Sbjct: 852 ataaatacagtgctcgttccactatatgtctccgaggttgctccaacaaaatacaggggt 911 Query: 723 actttgggtactctatgccagattggaacatgtttaggaataattgctgcactttccttg 782 ||||||| |||||||| ||||| ||||||||||| |||||||| |||||| | || ||| Sbjct: 912 tctttggggactctatgtcagatcggaacatgtttgggaataatcgctgcattctcattg 971 Query: 783 gggataccttctgaaagtgatccacattggtg 814 || ||||| ||||||||||| ||||||||||| Sbjct: 972 ggaataccatctgaaagtgacccacattggtg 1003
>ref|NM_001069628.1| Oryza sativa (japonica cultivar-group) Os09g0394500 (Os09g0394500) mRNA, complete cds Length = 1578 Score = 505 bits (255), Expect = e-139 Identities = 414/467 (88%) Strand = Plus / Plus Query: 852 gtggcgaacaatgctttatgcagcatgtgtgcctggttttttcattgttgttggaatgca 911 |||||| |||||||||||||| |||||||| |||||| || | ||||||| ||||||||| Sbjct: 711 gtggcggacaatgctttatgctgcatgtgtacctggtgttcttattgttgctggaatgca 770 Query: 912 attcgccgttgagagtccacgctggcttgccaaggttgggagattagatgatgccagaaa 971 ||| || ||||||||||| |||||||||||||||||||| ||| |||||||||||||||| Sbjct: 771 atttgctgttgagagtccccgctggcttgccaaggttggaagaatagatgatgccagaaa 830 Query: 972 agtggtagagaatatttggggagtttctgaagcggagaaggccatggaagaaatgaaatc 1031 || ||||| || |||||||| |||||||| |||||| |||||||||| || |||| Sbjct: 831 tgttgtagaacatgtttggggaccttctgaagttgagaagtccatggaagagatccaatc 890 Query: 1032 tgttgttgcgaatgatgattcacaggctagctggtcagaacttctggcggaaccccacaa 1091 ||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 891 tgttgttgcaaatgatgattcgcaggctagctggtcagaacttctggaagaaccccacaa 950 Query: 1092 tagagttgcattgattggagggtcactgttctttctgcaacagtttgctggaataaatgg 1151 |||||||||| ||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 951 tagagttgcactgattggagggtcccttttctttctgcaacagtttgctggcataaatgg 1010 Query: 1152 tgttctctatttttcatcattaacattccgtgatgttggtattaccagtggtgttttggc 1211 ||||| || || ||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 1011 cgttctgtacttctcatcattaacattccgtgatgttggtattaccagtggtatcttggc 1070 Query: 1212 gagcttatatgttggaataaccaactttggaggggcacttgttgcttcaaatttgatgga 1271 ||| |||||||||||||||| || |||| ||||||| |||||||||||| ||||||||| Sbjct: 1071 aagcctatatgttggaataactaattttgcaggggcaattgttgcttcaattttgatgga 1130 Query: 1272 caagcaaggacggaagaatcttttgatagggagctatcttggaatgg 1318 |||||||| || ||||| || |||| ||| |||||||||||||||| Sbjct: 1131 taagcaaggtcgaaagaaactcttgacaggaagctatcttggaatgg 1177 Score = 343 bits (173), Expect = 2e-90 Identities = 332/385 (86%) Strand = Plus / Plus Query: 1350 ttgctatgttccttatagtgttttccatcagctttccccttgatgaaggcgttggacata 1409 |||| |||||||| ||||| | | |||| ||||| |||||||||||||| ||| | ||| Sbjct: 1181 ttgcaatgttcctaatagtatatgccattagcttcccccttgatgaaggagttagccatg 1240 Query: 1410 ccctctcaattaccggaactcttttgtacatttttacttttgctgttggtgctggaccag 1469 ||| |||||||| |||||||| |||||||| ||||| || || |||| || ||||||| Sbjct: 1241 gcctgtcaattactggaactctgttgtacatatttacattcgccattggagccggaccag 1300 Query: 1470 ttactggaattatcatacctgagctgagcagtgcccggacacgctcaaaagttatggggt 1529 |||| ||||| |||||||| |||||||| |||| ||||||||||| ||||||||||| | Sbjct: 1301 ttacaggaatcatcataccagagctgagtggtgctcggacacgctcgaaagttatgggct 1360 Query: 1530 tcagcttcactgtacattgggtatgtaattttctggtgggactatatttcctggagcttg 1589 |||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| Sbjct: 1361 tcagcttcactgtacattggatatgcaattttctggtgggactgtatttcctggagcttg 1420 Query: 1590 taaagtcgtttggcgtcggagcggtctatgcaggcttcggcggggtctccttgttgtccg 1649 ||| ||| ||||| ||||| ||||||||||| || || || || ||||||||||| | Sbjct: 1421 cgaagaagttaggcgttggagccgtctatgcaggttttggtggagtatccttgttgtcag 1480 Query: 1650 cacttttcgcttacaatttcatagttgagacaaaaggacgttctcttgaggaaattgaga 1709 |||||||||| ||||||||||| || ||||| ||||||||||||||||||||||| || | Sbjct: 1481 cacttttcgcctacaatttcattgtcgagacgaaaggacgttctcttgaggaaatcgaaa 1540 Query: 1710 tgtctatgagccctgctgcccctgg 1734 ||||| ||||||||||||||||||| Sbjct: 1541 tgtctctgagccctgctgcccctgg 1565 Score = 303 bits (153), Expect = 1e-78 Identities = 243/273 (89%) Strand = Plus / Plus Query: 309 agatggaggcggtgacgctgatctcgggtgggttcgggcgttccctcacgtgctcactgc 368 |||||||||||| | ||||||||||||||| | |||| |||||| ||||||||||| || Sbjct: 267 agatggaggcggcggtgctgatctcgggtggctgcgggtgttcccgcacgtgctcacggc 326 Query: 369 gtccatggccaatttcctctttggctaccacattggggtcatgaatggtccaatagagga 428 |||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 327 gtccatggccaacttcctcttcggctaccacatcggggtcatgaatggtccaatagagga 386 Query: 429 tattgcacgagagcttggttttcaaggaaatccgtttctccaaggtcttgtggtcagcat 488 ||| ||||| |||||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct: 387 tatagcacgggagcttggttttcaggggaatccatttctccaaggtcttgtggtcagcat 446 Query: 489 attcattgtcggtgcattctttgggagcttaggctcgtctgcgctagttgattatttagg 548 ||||||||| || ||||| || || ||||||||||| ||||| ||||| || |||| || Sbjct: 447 attcattgttggagcatttttcggaagcttaggctcatctgcactagtcgacaattttgg 506 Query: 549 ttgtaaaaggactcttcagattgatagtattcc 581 ||||||||||||||||| |||||||| ||||| Sbjct: 507 atgtaaaaggactcttcaaattgatagcattcc 539 Score = 103 bits (52), Expect = 3e-18 Identities = 82/92 (89%) Strand = Plus / Plus Query: 603 caggcacattcgatggatgagatgctcctgggaaggttccttgttggcattggaattggc 662 |||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 568 caggcagattcgttggatgagatgctcttgggaagattccttgttggcattggaattggc 627 Query: 663 gtgaataccgtgcttgttccaatatatatctc 694 | ||||| ||||| |||||| ||||| |||| Sbjct: 628 ataaatacagtgctcgttccactatatgtctc 659
>gb|AY109968.1| Zea mays CL376_1 mRNA sequence Length = 1483 Score = 460 bits (232), Expect = e-125 Identities = 407/467 (87%) Strand = Plus / Plus Query: 852 gtggcgaacaatgctttatgcagcatgtgtgcctggttttttcattgttgttggaatgca 911 ||||||||||||||||||||| |||||||| ||||| || | ||||||| ||| ||||| Sbjct: 414 gtggcgaacaatgctttatgctgcatgtgtacctgggattcttattgttgctgggatgca 473 Query: 912 attcgccgttgagagtccacgctggcttgccaaggttgggagattagatgatgccagaaa 971 ||| || |||||||||||||| ||||||||||||||||| || || |||||||| ||||| Sbjct: 474 atttgctgttgagagtccacggtggcttgccaaggttggaaggttcgatgatgctagaaa 533 Query: 972 agtggtagagaatatttggggagtttctgaagcggagaaggccatggaagaaatgaaatc 1031 || ||||||| |||||| | |||||||| |||||| |||||||||| || ||| | Sbjct: 534 ggttgtagagagcctttgggaaccttctgaagttgagaagtccatggaagagatcaaagc 593 Query: 1032 tgttgttgcgaatgatgattcacaggctagctggtcagaacttctggcggaaccccacaa 1091 |||||| ||||||||||||| || ||||||||||| ||||||| |||||| || || Sbjct: 594 tgttgtgctaaatgatgattcacggggcagctggtcagaccttctggtggaaccacataa 653 Query: 1092 tagagttgcattgattggagggtcactgttctttctgcaacagtttgctggaataaatgg 1151 ||||||||||||||||||||| || || |||||||||||||||||||| ||||||||||| Sbjct: 654 tagagttgcattgattggaggatcccttttctttctgcaacagtttgcgggaataaatgg 713 Query: 1152 tgttctctatttttcatcattaacattccgtgatgttggtattaccagtggtgttttggc 1211 |||||| || ||||||| ||||||||||||||||||||||| ||||||| ||| || Sbjct: 714 tgttctttannnnncatcattgacattccgtgatgttggtattactagtggtgctttagc 773 Query: 1212 gagcttatatgttggaataaccaactttggaggggcacttgttgcttcaaatttgatgga 1271 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 aagcttatatgttggaataaccaactttggaggggcacttgttgcttcaaatttgatgga 833 Query: 1272 caagcaaggacggaagaatcttttgatagggagctatcttggaatgg 1318 ||||||||| || ||||| ||||||||||| ||||| |||||||||| Sbjct: 834 caagcaagggcgaaagaagcttttgataggaagctaccttggaatgg 880 Score = 264 bits (133), Expect = 1e-66 Identities = 264/311 (84%) Strand = Plus / Plus Query: 1424 ggaactcttttgtacatttttacttttgctgttggtgctggaccagttactggaattatc 1483 |||||||||||||||| |||||||| ||||||||||||||||||| || || || Sbjct: 958 ggaactcttttgtacannnnnacttttgcaattggtgctggaccagttaccggtatcatt 1017 Query: 1484 atacctgagctgagcagtgcccggacacgctcaaaagttatggggttcagcttcactgta 1543 ||||| ||||| |||||||| ||||||||||||||||||||||| ||||| |||||||| Sbjct: 1018 ataccagagctcagcagtgctcggacacgctcaaaagttatgggcttcagtttcactgtg 1077 Query: 1544 cattgggtatgtaattttctggtgggactatatttcctggagcttgtaaagtcgtttggc 1603 |||||| ||||||| ||||||||||||||| |||||||||||| || |||||| Sbjct: 1078 cattggatatgtaactttctggtgggactannnnncctggagcttgtgaacaagtttggg 1137 Query: 1604 gtcggagcggtctatgcaggcttcggcggggtctccttgttgtccgcacttttcgcttac 1663 || ||||| ||||||||||| || || ||||||||| || || | ||||| ||||| ||| Sbjct: 1138 gttggagcagtctatgcaggttttggtggggtctccctgctgacagcactcttcgcctac 1197 Query: 1664 aatttcatagttgagacaaaaggacgttctcttgaggaaattgagatgtctatgagccct 1723 |||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| | Sbjct: 1198 aatttcatagttgaaacaaaaggacgttcgcttgaggaaattgagatgtccttgagcagt 1257 Query: 1724 gctgcccctgg 1734 ||| ||||||| Sbjct: 1258 gctacccctgg 1268 Score = 234 bits (118), Expect = 1e-57 Identities = 178/198 (89%) Strand = Plus / Plus Query: 617 ggatgagatgctcctgggaaggttccttgttggcattggaattggcgtgaataccgtgct 676 |||||||||||| ||||||| |||||||||||||| || || ||||| || || || || Sbjct: 219 ggatgagatgcttttgggaagattccttgttggcatcgggatcggcgtaaacactgttct 278 Query: 677 tgttccaatatatatctctgaggttgctccaacaaaatacagaggcactttgggtactct 736 |||||||||||| |||||||||||||||||||||||||| || ||||||||||| ||||| Sbjct: 279 tgttccaatatacatctctgaggttgctccaacaaaatataggggcactttggggactct 338 Query: 737 atgccagattggaacatgtttaggaataattgctgcactttccttggggataccttctga 796 || || |||||||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 339 gtgtcaaattggaacatgtctaggcataattgctgcactttccttggggataccttctga 398 Query: 797 aagtgatccacattggtg 814 ||||||||||||||||| Sbjct: 399 gagtgatccacattggtg 416 Score = 129 bits (65), Expect = 4e-26 Identities = 149/179 (83%) Strand = Plus / Plus Query: 415 ggtccaatagaggatattgcacgagagcttggttttcaaggaaatccgtttctccaaggt 474 ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 10 ggtccaatagaggatattgcaacccagcttggttttcaaggaaatccgttcctccaaggt 69 Query: 475 cttgtggtcagcatattcattgtcggtgcattctttgggagcttaggctcgtctgcgcta 534 |||||||| |||||||||||||| ||||| |||||| ||||||| ||||| || Sbjct: 70 cttgtggtgagcatattcattgttggtgccnnnnnngggagcctaggctcatctgcatta 129 Query: 535 gttgattatttaggttgtaaaaggactcttcagattgatagtattccattaattcttgg 593 || ||| | || || || || ||||| |||||||| || ||||||||||| ||| |||| Sbjct: 130 gtagataagttcggctgcaagaggacccttcagatcgacagtattccattgattattgg 188
>dbj|AK240811.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065006N24, full insert sequence Length = 1541 Score = 335 bits (169), Expect = 4e-88 Identities = 331/385 (85%) Strand = Plus / Plus Query: 1350 ttgctatgttccttatagtgttttccatcagctttccccttgatgaaggcgttggacata 1409 |||| |||||||| ||||| | | | || ||||| |||||||||||||| ||| | ||| Sbjct: 834 ttgcaatgttcctaatagtatatgctattagcttcccccttgatgaaggagttagccatg 893 Query: 1410 ccctctcaattaccggaactcttttgtacatttttacttttgctgttggtgctggaccag 1469 ||| |||||||| |||||||| |||||||| ||||| || || |||| || ||||||| Sbjct: 894 gcctgtcaattactggaactctgttgtacatatttacattcgccattggagccggaccag 953 Query: 1470 ttactggaattatcatacctgagctgagcagtgcccggacacgctcaaaagttatggggt 1529 |||| ||||| |||||||| |||||||| |||| ||||||||||| ||||||||||| | Sbjct: 954 ttacaggaatcatcataccagagctgagtggtgctcggacacgctcgaaagttatgggct 1013 Query: 1530 tcagcttcactgtacattgggtatgtaattttctggtgggactatatttcctggagcttg 1589 |||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| Sbjct: 1014 tcagcttcactgtacattggatatgcaattttctggtgggactgtatttcctggagcttg 1073 Query: 1590 taaagtcgtttggcgtcggagcggtctatgcaggcttcggcggggtctccttgttgtccg 1649 | ||| ||| ||||| ||||| ||||||||||| || || || || ||||| ||||| | Sbjct: 1074 tgaagaagttaggcgttggagccgtctatgcaggttttggtggagtatccttcttgtcag 1133 Query: 1650 cacttttcgcttacaatttcatagttgagacaaaaggacgttctcttgaggaaattgaga 1709 |||||||||| ||||||||||| || ||||| ||||||||||||||||||||||| || | Sbjct: 1134 cacttttcgcctacaatttcattgtcgagacgaaaggacgttctcttgaggaaatcgaaa 1193 Query: 1710 tgtctatgagccctgctgcccctgg 1734 ||||| ||||||||||||||||||| Sbjct: 1194 tgtctctgagccctgctgcccctgg 1218 Score = 250 bits (126), Expect = 2e-62 Identities = 198/222 (89%) Strand = Plus / Plus Query: 1097 ttgcattgattggagggtcactgttctttctgcaacagtttgctggaataaatggtgttc 1156 ||||| ||||||||||||| || ||||||||||||||||||||||| |||||||| |||| Sbjct: 609 ttgcactgattggagggtcccttttctttctgcaacagtttgctggcataaatggcgttc 668 Query: 1157 tctatttttcatcattaacattccgtgatgttggtattaccagtggtgttttggcgagct 1216 | || || |||||||||||||||| |||||||||||||||||||||| | ||||| |||| Sbjct: 669 tgtacttctcatcattaacattccatgatgttggtattaccagtggtatcttggcaagct 728 Query: 1217 tatatgttggaataaccaactttggaggggcacttgttgcttcaaatttgatggacaagc 1276 |||||||||||||||| || |||| ||||||| |||||||||||| ||||||||| |||| Sbjct: 729 tatatgttggaataactaattttgcaggggcaattgttgcttcaattttgatggataagc 788 Query: 1277 aaggacggaagaatcttttgatagggagctatcttggaatgg 1318 |||| || ||||| || |||| ||| |||||||||||||||| Sbjct: 789 aaggtcgaaagaaactcttgacaggaagctatcttggaatgg 830
>emb|CT835827.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA002J05, full insert sequence Length = 776 Score = 327 bits (165), Expect = 9e-86 Identities = 330/385 (85%) Strand = Plus / Plus Query: 1350 ttgctatgttccttatagtgttttccatcagctttccccttgatgaaggcgttggacata 1409 |||| |||||||| ||||| | | | || ||||| |||||| ||||||| ||| | ||| Sbjct: 64 ttgcaatgttcctaatagtatatgctattagcttcccccttaatgaaggagttagccatg 123 Query: 1410 ccctctcaattaccggaactcttttgtacatttttacttttgctgttggtgctggaccag 1469 ||| |||||||| |||||||| |||||||| ||||| || || |||| |||||||||| Sbjct: 124 gcctgtcaattactggaactctgttgtacatatttacattcgccattggagctggaccag 183 Query: 1470 ttactggaattatcatacctgagctgagcagtgcccggacacgctcaaaagttatggggt 1529 |||| ||||| |||||||| |||||||| |||| ||||||||||| ||||||||||| | Sbjct: 184 ttacaggaatcatcataccagagctgagtggtgctcggacacgctcgaaagttatgggct 243 Query: 1530 tcagcttcactgtacattgggtatgtaattttctggtgggactatatttcctggagcttg 1589 |||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| Sbjct: 244 tcagcttcactgtacattggatatgcaattttctggtgggactgtatttcctggagcttg 303 Query: 1590 taaagtcgtttggcgtcggagcggtctatgcaggcttcggcggggtctccttgttgtccg 1649 | ||| ||| ||||| ||||| ||||||||||| || || || || ||||| ||||| | Sbjct: 304 tgaagaagttaggcgttggagccgtctatgcaggttttggtggagtatccttcttgtcag 363 Query: 1650 cacttttcgcttacaatttcatagttgagacaaaaggacgttctcttgaggaaattgaga 1709 |||||||||| ||||||||||| || |||| ||||||||||||||||||||||| || | Sbjct: 364 cacttttcgcctacaatttcattgtcgagatgaaaggacgttctcttgaggaaatcgaaa 423 Query: 1710 tgtctatgagccctgctgcccctgg 1734 ||||| ||||||||||||||||||| Sbjct: 424 tgtctctgagccctgctgcccctgg 448
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 202 bits (102), Expect = 4e-48 Identities = 159/178 (89%) Strand = Plus / Plus Query: 404 gggtcatgaatggtccaatagaggatattgcacgagagcttggttttcaaggaaatccgt 463 |||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||| | Sbjct: 13612725 gggtcatgaatggtccaatagaggatatagcacgggagcttggttttcaggggaatccat 13612784 Query: 464 ttctccaaggtcttgtggtcagcatattcattgtcggtgcattctttgggagcttaggct 523 |||||||||||||||||||||||||||||||||| || ||||| || || |||||||||| Sbjct: 13612785 ttctccaaggtcttgtggtcagcatattcattgttggagcatttttcggaagcttaggct 13612844 Query: 524 cgtctgcgctagttgattatttaggttgtaaaaggactcttcagattgatagtattcc 581 | ||||| ||||| || |||| || ||||||||||||||||| |||||||| ||||| Sbjct: 13612845 catctgcactagtcgacaattttggatgtaaaaggactcttcaaattgatagcattcc 13612902 Score = 190 bits (96), Expect = 1e-44 Identities = 162/184 (88%) Strand = Plus / Plus Query: 1551 tatgtaattttctggtgggactatatttcctggagcttgtaaagtcgtttggcgtcggag 1610 |||| ||||||||||||||||| |||||||||||||||| ||| ||| ||||| |||| Sbjct: 13616105 tatgcaattttctggtgggactgtatttcctggagcttgcgaagaagttaggcgttggag 13616164 Query: 1611 cggtctatgcaggcttcggcggggtctccttgttgtccgcacttttcgcttacaatttca 1670 | ||||||||||| || || || || ||||||||||| ||||||||||| |||||||||| Sbjct: 13616165 ccgtctatgcaggttttggtggagtatccttgttgtcagcacttttcgcctacaatttca 13616224 Query: 1671 tagttgagacaaaaggacgttctcttgaggaaattgagatgtctatgagccctgctgccc 1730 | || ||||| ||||||||||||||||||||||| || |||||| ||||||||||||||| Sbjct: 13616225 ttgtcgagacgaaaggacgttctcttgaggaaatcgaaatgtctctgagccctgctgccc 13616284 Query: 1731 ctgg 1734 |||| Sbjct: 13616285 ctgg 13616288 Score = 190 bits (96), Expect = 1e-44 Identities = 162/184 (88%) Strand = Plus / Plus Query: 1551 tatgtaattttctggtgggactatatttcctggagcttgtaaagtcgtttggcgtcggag 1610 |||| ||||||||||||||||| ||||||||||||||||| ||| ||| ||||| |||| Sbjct: 16910643 tatgcaattttctggtgggactgtatttcctggagcttgtgaagaagttaggcgttggag 16910702 Query: 1611 cggtctatgcaggcttcggcggggtctccttgttgtccgcacttttcgcttacaatttca 1670 | ||||||||||| || || || || ||||| ||||| ||||||||||| |||||||||| Sbjct: 16910703 ccgtctatgcaggttttggtggagtatccttcttgtcagcacttttcgcctacaatttca 16910762 Query: 1671 tagttgagacaaaaggacgttctcttgaggaaattgagatgtctatgagccctgctgccc 1730 | || ||||| ||||||||||||||||||||||| || |||||| ||||||||||||||| Sbjct: 16910763 ttgtcgagacgaaaggacgttctcttgaggaaatcgaaatgtctctgagccctgctgccc 16910822 Query: 1731 ctgg 1734 |||| Sbjct: 16910823 ctgg 16910826 Score = 178 bits (90), Expect = 5e-41 Identities = 126/138 (91%) Strand = Plus / Plus Query: 1095 agttgcattgattggagggtcactgttctttctgcaacagtttgctggaataaatggtgt 1154 ||||||| ||||||||||||| || ||||||||||||||||||||||| |||||||| || Sbjct: 13614775 agttgcactgattggagggtcccttttctttctgcaacagtttgctggcataaatggcgt 13614834 Query: 1155 tctctatttttcatcattaacattccgtgatgttggtattaccagtggtgttttggcgag 1214 ||| || || ||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 13614835 tctgtacttctcatcattaacattccgtgatgttggtattaccagtggtatcttggcaag 13614894 Query: 1215 cttatatgttggaataac 1232 | |||||||||||||||| Sbjct: 13614895 cctatatgttggaataac 13614912 Score = 178 bits (90), Expect = 5e-41 Identities = 126/138 (91%) Strand = Plus / Plus Query: 1095 agttgcattgattggagggtcactgttctttctgcaacagtttgctggaataaatggtgt 1154 ||||||| ||||||||||||| || ||||||||||||||||||||||| |||||||| || Sbjct: 16909316 agttgcactgattggagggtcccttttctttctgcaacagtttgctggcataaatggcgt 16909375 Query: 1155 tctctatttttcatcattaacattccgtgatgttggtattaccagtggtgttttggcgag 1214 ||| || || |||||||||||||||| |||||||||||||||||||||| | ||||| || Sbjct: 16909376 tctgtacttctcatcattaacattccatgatgttggtattaccagtggtatcttggcaag 16909435 Query: 1215 cttatatgttggaataac 1232 |||||||||||||||||| Sbjct: 16909436 cttatatgttggaataac 16909453 Score = 153 bits (77), Expect = 3e-33 Identities = 134/153 (87%) Strand = Plus / Plus Query: 944 aggttgggagattagatgatgccagaaaagtggtagagaatatttggggagtttctgaag 1003 ||||||| ||| |||||||||||||||| || ||||| || |||||||| |||||||| Sbjct: 13614040 aggttggaagaatagatgatgccagaaatgttgtagaacatgtttggggaccttctgaag 13614099 Query: 1004 cggagaaggccatggaagaaatgaaatctgttgttgcgaatgatgattcacaggctagct 1063 |||||| |||||||||| || ||||||||||||| ||||||||||| |||||||||| Sbjct: 13614100 ttgagaagtccatggaagagatccaatctgttgttgcaaatgatgattcgcaggctagct 13614159 Query: 1064 ggtcagaacttctggcggaaccccacaatagag 1096 ||||||||||||||| |||||||||||||||| Sbjct: 13614160 ggtcagaacttctggaagaaccccacaatagag 13614192 Score = 133 bits (67), Expect = 3e-27 Identities = 109/123 (88%) Strand = Plus / Plus Query: 697 aggttgctccaacaaaatacagaggcactttgggtactctatgccagattggaacatgtt 756 |||||||||||||||||||||| || ||||||| |||||||| ||||| |||||||||| Sbjct: 13613327 aggttgctccaacaaaatacaggggttctttggggactctatgtcagatcggaacatgtt 13613386 Query: 757 taggaataattgctgcactttccttggggataccttctgaaagtgatccacattggtgag 816 | |||||||| |||||| | || ||||| ||||| ||||||||||| ||||||||||||| Sbjct: 13613387 tgggaataatcgctgcattctcattgggaataccatctgaaagtgacccacattggtgag 13613446 Query: 817 gca 819 ||| Sbjct: 13613447 gca 13613449 Score = 119 bits (60), Expect = 4e-23 Identities = 84/92 (91%) Strand = Plus / Plus Query: 1463 ggaccagttactggaattatcatacctgagctgagcagtgcccggacacgctcaaaagtt 1522 ||||||||||| ||||| |||||||| |||||||| |||| ||||||||||| |||||| Sbjct: 13615868 ggaccagttacaggaatcatcataccagagctgagtggtgctcggacacgctcgaaagtt 13615927 Query: 1523 atggggttcagcttcactgtacattgggtatg 1554 ||||| |||||||||||||||||||||||||| Sbjct: 13615928 atgggcttcagcttcactgtacattgggtatg 13615959 Score = 119 bits (60), Expect = 4e-23 Identities = 84/92 (91%) Strand = Plus / Plus Query: 1463 ggaccagttactggaattatcatacctgagctgagcagtgcccggacacgctcaaaagtt 1522 ||||||||||| ||||| |||||||| |||||||| |||| ||||||||||| |||||| Sbjct: 16910406 ggaccagttacaggaatcatcataccagagctgagtggtgctcggacacgctcgaaagtt 16910465 Query: 1523 atggggttcagcttcactgtacattgggtatg 1554 ||||| |||||||||||||||||||||||||| Sbjct: 16910466 atgggcttcagcttcactgtacattgggtatg 16910497 Score = 111 bits (56), Expect = 1e-20 Identities = 86/96 (89%) Strand = Plus / Plus Query: 852 gtggcgaacaatgctttatgcagcatgtgtgcctggttttttcattgttgttggaatgca 911 |||||| |||||||||||||| |||||||| |||||| || | ||||||| ||||||||| Sbjct: 13613871 gtggcggacaatgctttatgctgcatgtgtacctggtgttcttattgttgctggaatgca 13613930 Query: 912 attcgccgttgagagtccacgctggcttgccaaggt 947 ||| || ||||||||||| ||||||||||||||||| Sbjct: 13613931 atttgctgttgagagtccccgctggcttgccaaggt 13613966 Score = 107 bits (54), Expect = 2e-19 Identities = 87/98 (88%) Strand = Plus / Plus Query: 603 caggcacattcgatggatgagatgctcctgggaaggttccttgttggcattggaattggc 662 |||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 13613090 caggcagattcgttggatgagatgctcttgggaagattccttgttggcattggaattggc 13613149 Query: 663 gtgaataccgtgcttgttccaatatatatctctgaggt 700 | ||||| ||||| |||||| ||||| |||| ||||| Sbjct: 13613150 ataaatacagtgctcgttccactatatgtctccgaggt 13613187 Score = 105 bits (53), Expect = 7e-19 Identities = 83/93 (89%) Strand = Plus / Plus Query: 309 agatggaggcggtgacgctgatctcgggtgggttcgggcgttccctcacgtgctcactgc 368 |||||||||||| | ||||||||||||||| | |||| |||||| ||||||||||| || Sbjct: 13612415 agatggaggcggcggtgctgatctcgggtggctgcgggtgttcccgcacgtgctcacggc 13612474 Query: 369 gtccatggccaatttcctctttggctaccacat 401 |||||||||||| |||||||| ||||||||||| Sbjct: 13612475 gtccatggccaacttcctcttcggctaccacat 13612507 Score = 87.7 bits (44), Expect = 2e-13 Identities = 71/80 (88%) Strand = Plus / Plus Query: 1242 aggggcacttgttgcttcaaatttgatggacaagcaaggacggaagaatcttttgatagg 1301 ||||||| |||||||||||| ||||||||| |||||||| || ||||| || |||| ||| Sbjct: 13614992 aggggcaattgttgcttcaattttgatggataagcaaggtcgaaagaaactcttgacagg 13615051 Query: 1302 gagctatcttggaatggtat 1321 ||||||||||||||||||| Sbjct: 13615052 aagctatcttggaatggtat 13615071 Score = 87.7 bits (44), Expect = 2e-13 Identities = 71/80 (88%) Strand = Plus / Plus Query: 1242 aggggcacttgttgcttcaaatttgatggacaagcaaggacggaagaatcttttgatagg 1301 ||||||| |||||||||||| ||||||||| |||||||| || ||||| || |||| ||| Sbjct: 16909533 aggggcaattgttgcttcaattttgatggataagcaaggtcgaaagaaactcttgacagg 16909592 Query: 1302 gagctatcttggaatggtat 1321 ||||||||||||||||||| Sbjct: 16909593 aagctatcttggaatggtat 16909612 Score = 56.0 bits (28), Expect = 5e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 1350 ttgctatgttccttatagtgttttccatcagctttccccttgatgaaggcgttggacata 1409 |||| |||||||| ||||| | | |||| ||||| |||||||||||||| ||| | ||| Sbjct: 13615292 ttgcaatgttcctaatagtatatgccattagcttcccccttgatgaaggagttagccatg 13615351 Query: 1410 ccctctcaattaccggaactcttttgta 1437 ||| |||||||| |||||||| ||||| Sbjct: 13615352 gcctgtcaattactggaactctgttgta 13615379 Score = 48.1 bits (24), Expect = 0.13 Identities = 72/88 (81%) Strand = Plus / Plus Query: 1350 ttgctatgttccttatagtgttttccatcagctttccccttgatgaaggcgttggacata 1409 |||| |||||||| ||||| | | | || ||||| |||||||||||||| ||| | ||| Sbjct: 16909832 ttgcaatgttcctaatagtatatgctattagcttcccccttgatgaaggagttagccatg 16909891 Query: 1410 ccctctcaattaccggaactcttttgta 1437 ||| |||||||| |||||||| ||||| Sbjct: 16909892 gcctgtcaattactggaactctgttgta 16909919
>dbj|AP006453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1339H09 Length = 131136 Score = 202 bits (102), Expect = 4e-48 Identities = 159/178 (89%) Strand = Plus / Plus Query: 404 gggtcatgaatggtccaatagaggatattgcacgagagcttggttttcaaggaaatccgt 463 |||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||| | Sbjct: 50141 gggtcatgaatggtccaatagaggatatagcacgggagcttggttttcaggggaatccat 50200 Query: 464 ttctccaaggtcttgtggtcagcatattcattgtcggtgcattctttgggagcttaggct 523 |||||||||||||||||||||||||||||||||| || ||||| || || |||||||||| Sbjct: 50201 ttctccaaggtcttgtggtcagcatattcattgttggagcatttttcggaagcttaggct 50260 Query: 524 cgtctgcgctagttgattatttaggttgtaaaaggactcttcagattgatagtattcc 581 | ||||| ||||| || |||| || ||||||||||||||||| |||||||| ||||| Sbjct: 50261 catctgcactagtcgacaattttggatgtaaaaggactcttcaaattgatagcattcc 50318 Score = 190 bits (96), Expect = 1e-44 Identities = 162/184 (88%) Strand = Plus / Plus Query: 1551 tatgtaattttctggtgggactatatttcctggagcttgtaaagtcgtttggcgtcggag 1610 |||| ||||||||||||||||| |||||||||||||||| ||| ||| ||||| |||| Sbjct: 53521 tatgcaattttctggtgggactgtatttcctggagcttgcgaagaagttaggcgttggag 53580 Query: 1611 cggtctatgcaggcttcggcggggtctccttgttgtccgcacttttcgcttacaatttca 1670 | ||||||||||| || || || || ||||||||||| ||||||||||| |||||||||| Sbjct: 53581 ccgtctatgcaggttttggtggagtatccttgttgtcagcacttttcgcctacaatttca 53640 Query: 1671 tagttgagacaaaaggacgttctcttgaggaaattgagatgtctatgagccctgctgccc 1730 | || ||||| ||||||||||||||||||||||| || |||||| ||||||||||||||| Sbjct: 53641 ttgtcgagacgaaaggacgttctcttgaggaaatcgaaatgtctctgagccctgctgccc 53700 Query: 1731 ctgg 1734 |||| Sbjct: 53701 ctgg 53704 Score = 178 bits (90), Expect = 5e-41 Identities = 126/138 (91%) Strand = Plus / Plus Query: 1095 agttgcattgattggagggtcactgttctttctgcaacagtttgctggaataaatggtgt 1154 ||||||| ||||||||||||| || ||||||||||||||||||||||| |||||||| || Sbjct: 52191 agttgcactgattggagggtcccttttctttctgcaacagtttgctggcataaatggcgt 52250 Query: 1155 tctctatttttcatcattaacattccgtgatgttggtattaccagtggtgttttggcgag 1214 ||| || || ||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 52251 tctgtacttctcatcattaacattccgtgatgttggtattaccagtggtatcttggcaag 52310 Query: 1215 cttatatgttggaataac 1232 | |||||||||||||||| Sbjct: 52311 cctatatgttggaataac 52328 Score = 153 bits (77), Expect = 3e-33 Identities = 134/153 (87%) Strand = Plus / Plus Query: 944 aggttgggagattagatgatgccagaaaagtggtagagaatatttggggagtttctgaag 1003 ||||||| ||| |||||||||||||||| || ||||| || |||||||| |||||||| Sbjct: 51456 aggttggaagaatagatgatgccagaaatgttgtagaacatgtttggggaccttctgaag 51515 Query: 1004 cggagaaggccatggaagaaatgaaatctgttgttgcgaatgatgattcacaggctagct 1063 |||||| |||||||||| || ||||||||||||| ||||||||||| |||||||||| Sbjct: 51516 ttgagaagtccatggaagagatccaatctgttgttgcaaatgatgattcgcaggctagct 51575 Query: 1064 ggtcagaacttctggcggaaccccacaatagag 1096 ||||||||||||||| |||||||||||||||| Sbjct: 51576 ggtcagaacttctggaagaaccccacaatagag 51608 Score = 133 bits (67), Expect = 3e-27 Identities = 109/123 (88%) Strand = Plus / Plus Query: 697 aggttgctccaacaaaatacagaggcactttgggtactctatgccagattggaacatgtt 756 |||||||||||||||||||||| || ||||||| |||||||| ||||| |||||||||| Sbjct: 50743 aggttgctccaacaaaatacaggggttctttggggactctatgtcagatcggaacatgtt 50802 Query: 757 taggaataattgctgcactttccttggggataccttctgaaagtgatccacattggtgag 816 | |||||||| |||||| | || ||||| ||||| ||||||||||| ||||||||||||| Sbjct: 50803 tgggaataatcgctgcattctcattgggaataccatctgaaagtgacccacattggtgag 50862 Query: 817 gca 819 ||| Sbjct: 50863 gca 50865 Score = 119 bits (60), Expect = 4e-23 Identities = 84/92 (91%) Strand = Plus / Plus Query: 1463 ggaccagttactggaattatcatacctgagctgagcagtgcccggacacgctcaaaagtt 1522 ||||||||||| ||||| |||||||| |||||||| |||| ||||||||||| |||||| Sbjct: 53284 ggaccagttacaggaatcatcataccagagctgagtggtgctcggacacgctcgaaagtt 53343 Query: 1523 atggggttcagcttcactgtacattgggtatg 1554 ||||| |||||||||||||||||||||||||| Sbjct: 53344 atgggcttcagcttcactgtacattgggtatg 53375 Score = 111 bits (56), Expect = 1e-20 Identities = 86/96 (89%) Strand = Plus / Plus Query: 852 gtggcgaacaatgctttatgcagcatgtgtgcctggttttttcattgttgttggaatgca 911 |||||| |||||||||||||| |||||||| |||||| || | ||||||| ||||||||| Sbjct: 51287 gtggcggacaatgctttatgctgcatgtgtacctggtgttcttattgttgctggaatgca 51346 Query: 912 attcgccgttgagagtccacgctggcttgccaaggt 947 ||| || ||||||||||| ||||||||||||||||| Sbjct: 51347 atttgctgttgagagtccccgctggcttgccaaggt 51382 Score = 107 bits (54), Expect = 2e-19 Identities = 87/98 (88%) Strand = Plus / Plus Query: 603 caggcacattcgatggatgagatgctcctgggaaggttccttgttggcattggaattggc 662 |||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 50506 caggcagattcgttggatgagatgctcttgggaagattccttgttggcattggaattggc 50565 Query: 663 gtgaataccgtgcttgttccaatatatatctctgaggt 700 | ||||| ||||| |||||| ||||| |||| ||||| Sbjct: 50566 ataaatacagtgctcgttccactatatgtctccgaggt 50603 Score = 105 bits (53), Expect = 7e-19 Identities = 83/93 (89%) Strand = Plus / Plus Query: 309 agatggaggcggtgacgctgatctcgggtgggttcgggcgttccctcacgtgctcactgc 368 |||||||||||| | ||||||||||||||| | |||| |||||| ||||||||||| || Sbjct: 49831 agatggaggcggcggtgctgatctcgggtggctgcgggtgttcccgcacgtgctcacggc 49890 Query: 369 gtccatggccaatttcctctttggctaccacat 401 |||||||||||| |||||||| ||||||||||| Sbjct: 49891 gtccatggccaacttcctcttcggctaccacat 49923 Score = 87.7 bits (44), Expect = 2e-13 Identities = 71/80 (88%) Strand = Plus / Plus Query: 1242 aggggcacttgttgcttcaaatttgatggacaagcaaggacggaagaatcttttgatagg 1301 ||||||| |||||||||||| ||||||||| |||||||| || ||||| || |||| ||| Sbjct: 52408 aggggcaattgttgcttcaattttgatggataagcaaggtcgaaagaaactcttgacagg 52467 Query: 1302 gagctatcttggaatggtat 1321 ||||||||||||||||||| Sbjct: 52468 aagctatcttggaatggtat 52487 Score = 56.0 bits (28), Expect = 5e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 1350 ttgctatgttccttatagtgttttccatcagctttccccttgatgaaggcgttggacata 1409 |||| |||||||| ||||| | | |||| ||||| |||||||||||||| ||| | ||| Sbjct: 52708 ttgcaatgttcctaatagtatatgccattagcttcccccttgatgaaggagttagccatg 52767 Query: 1410 ccctctcaattaccggaactcttttgta 1437 ||| |||||||| |||||||| ||||| Sbjct: 52768 gcctgtcaattactggaactctgttgta 52795
>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1040D06 Length = 155034 Score = 202 bits (102), Expect = 4e-48 Identities = 159/178 (89%) Strand = Plus / Plus Query: 404 gggtcatgaatggtccaatagaggatattgcacgagagcttggttttcaaggaaatccgt 463 |||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||| | Sbjct: 10839 gggtcatgaatggtccaatagaggatatagcacgggagcttggttttcaggggaatccat 10898 Query: 464 ttctccaaggtcttgtggtcagcatattcattgtcggtgcattctttgggagcttaggct 523 |||||||||||||||||||||||||||||||||| || ||||| || || |||||||||| Sbjct: 10899 ttctccaaggtcttgtggtcagcatattcattgttggagcatttttcggaagcttaggct 10958 Query: 524 cgtctgcgctagttgattatttaggttgtaaaaggactcttcagattgatagtattcc 581 | ||||| ||||| || |||| || ||||||||||||||||| |||||||| ||||| Sbjct: 10959 catctgcactagtcgacaattttggatgtaaaaggactcttcaaattgatagcattcc 11016 Score = 190 bits (96), Expect = 1e-44 Identities = 162/184 (88%) Strand = Plus / Plus Query: 1551 tatgtaattttctggtgggactatatttcctggagcttgtaaagtcgtttggcgtcggag 1610 |||| ||||||||||||||||| |||||||||||||||| ||| ||| ||||| |||| Sbjct: 14219 tatgcaattttctggtgggactgtatttcctggagcttgcgaagaagttaggcgttggag 14278 Query: 1611 cggtctatgcaggcttcggcggggtctccttgttgtccgcacttttcgcttacaatttca 1670 | ||||||||||| || || || || ||||||||||| ||||||||||| |||||||||| Sbjct: 14279 ccgtctatgcaggttttggtggagtatccttgttgtcagcacttttcgcctacaatttca 14338 Query: 1671 tagttgagacaaaaggacgttctcttgaggaaattgagatgtctatgagccctgctgccc 1730 | || ||||| ||||||||||||||||||||||| || |||||| ||||||||||||||| Sbjct: 14339 ttgtcgagacgaaaggacgttctcttgaggaaatcgaaatgtctctgagccctgctgccc 14398 Query: 1731 ctgg 1734 |||| Sbjct: 14399 ctgg 14402 Score = 178 bits (90), Expect = 5e-41 Identities = 126/138 (91%) Strand = Plus / Plus Query: 1095 agttgcattgattggagggtcactgttctttctgcaacagtttgctggaataaatggtgt 1154 ||||||| ||||||||||||| || ||||||||||||||||||||||| |||||||| || Sbjct: 12889 agttgcactgattggagggtcccttttctttctgcaacagtttgctggcataaatggcgt 12948 Query: 1155 tctctatttttcatcattaacattccgtgatgttggtattaccagtggtgttttggcgag 1214 ||| || || ||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 12949 tctgtacttctcatcattaacattccgtgatgttggtattaccagtggtatcttggcaag 13008 Query: 1215 cttatatgttggaataac 1232 | |||||||||||||||| Sbjct: 13009 cctatatgttggaataac 13026 Score = 153 bits (77), Expect = 3e-33 Identities = 134/153 (87%) Strand = Plus / Plus Query: 944 aggttgggagattagatgatgccagaaaagtggtagagaatatttggggagtttctgaag 1003 ||||||| ||| |||||||||||||||| || ||||| || |||||||| |||||||| Sbjct: 12154 aggttggaagaatagatgatgccagaaatgttgtagaacatgtttggggaccttctgaag 12213 Query: 1004 cggagaaggccatggaagaaatgaaatctgttgttgcgaatgatgattcacaggctagct 1063 |||||| |||||||||| || ||||||||||||| ||||||||||| |||||||||| Sbjct: 12214 ttgagaagtccatggaagagatccaatctgttgttgcaaatgatgattcgcaggctagct 12273 Query: 1064 ggtcagaacttctggcggaaccccacaatagag 1096 ||||||||||||||| |||||||||||||||| Sbjct: 12274 ggtcagaacttctggaagaaccccacaatagag 12306 Score = 133 bits (67), Expect = 3e-27 Identities = 109/123 (88%) Strand = Plus / Plus Query: 697 aggttgctccaacaaaatacagaggcactttgggtactctatgccagattggaacatgtt 756 |||||||||||||||||||||| || ||||||| |||||||| ||||| |||||||||| Sbjct: 11441 aggttgctccaacaaaatacaggggttctttggggactctatgtcagatcggaacatgtt 11500 Query: 757 taggaataattgctgcactttccttggggataccttctgaaagtgatccacattggtgag 816 | |||||||| |||||| | || ||||| ||||| ||||||||||| ||||||||||||| Sbjct: 11501 tgggaataatcgctgcattctcattgggaataccatctgaaagtgacccacattggtgag 11560 Query: 817 gca 819 ||| Sbjct: 11561 gca 11563 Score = 119 bits (60), Expect = 4e-23 Identities = 84/92 (91%) Strand = Plus / Plus Query: 1463 ggaccagttactggaattatcatacctgagctgagcagtgcccggacacgctcaaaagtt 1522 ||||||||||| ||||| |||||||| |||||||| |||| ||||||||||| |||||| Sbjct: 13982 ggaccagttacaggaatcatcataccagagctgagtggtgctcggacacgctcgaaagtt 14041 Query: 1523 atggggttcagcttcactgtacattgggtatg 1554 ||||| |||||||||||||||||||||||||| Sbjct: 14042 atgggcttcagcttcactgtacattgggtatg 14073 Score = 111 bits (56), Expect = 1e-20 Identities = 86/96 (89%) Strand = Plus / Plus Query: 852 gtggcgaacaatgctttatgcagcatgtgtgcctggttttttcattgttgttggaatgca 911 |||||| |||||||||||||| |||||||| |||||| || | ||||||| ||||||||| Sbjct: 11985 gtggcggacaatgctttatgctgcatgtgtacctggtgttcttattgttgctggaatgca 12044 Query: 912 attcgccgttgagagtccacgctggcttgccaaggt 947 ||| || ||||||||||| ||||||||||||||||| Sbjct: 12045 atttgctgttgagagtccccgctggcttgccaaggt 12080 Score = 107 bits (54), Expect = 2e-19 Identities = 87/98 (88%) Strand = Plus / Plus Query: 603 caggcacattcgatggatgagatgctcctgggaaggttccttgttggcattggaattggc 662 |||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 11204 caggcagattcgttggatgagatgctcttgggaagattccttgttggcattggaattggc 11263 Query: 663 gtgaataccgtgcttgttccaatatatatctctgaggt 700 | ||||| ||||| |||||| ||||| |||| ||||| Sbjct: 11264 ataaatacagtgctcgttccactatatgtctccgaggt 11301 Score = 105 bits (53), Expect = 7e-19 Identities = 83/93 (89%) Strand = Plus / Plus Query: 309 agatggaggcggtgacgctgatctcgggtgggttcgggcgttccctcacgtgctcactgc 368 |||||||||||| | ||||||||||||||| | |||| |||||| ||||||||||| || Sbjct: 10529 agatggaggcggcggtgctgatctcgggtggctgcgggtgttcccgcacgtgctcacggc 10588 Query: 369 gtccatggccaatttcctctttggctaccacat 401 |||||||||||| |||||||| ||||||||||| Sbjct: 10589 gtccatggccaacttcctcttcggctaccacat 10621 Score = 87.7 bits (44), Expect = 2e-13 Identities = 71/80 (88%) Strand = Plus / Plus Query: 1242 aggggcacttgttgcttcaaatttgatggacaagcaaggacggaagaatcttttgatagg 1301 ||||||| |||||||||||| ||||||||| |||||||| || ||||| || |||| ||| Sbjct: 13106 aggggcaattgttgcttcaattttgatggataagcaaggtcgaaagaaactcttgacagg 13165 Query: 1302 gagctatcttggaatggtat 1321 ||||||||||||||||||| Sbjct: 13166 aagctatcttggaatggtat 13185 Score = 56.0 bits (28), Expect = 5e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 1350 ttgctatgttccttatagtgttttccatcagctttccccttgatgaaggcgttggacata 1409 |||| |||||||| ||||| | | |||| ||||| |||||||||||||| ||| | ||| Sbjct: 13406 ttgcaatgttcctaatagtatatgccattagcttcccccttgatgaaggagttagccatg 13465 Query: 1410 ccctctcaattaccggaactcttttgta 1437 ||| |||||||| |||||||| ||||| Sbjct: 13466 gcctgtcaattactggaactctgttgta 13493
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 190 bits (96), Expect = 1e-44 Identities = 162/184 (88%) Strand = Plus / Plus Query: 1551 tatgtaattttctggtgggactatatttcctggagcttgtaaagtcgtttggcgtcggag 1610 |||| ||||||||||||||||| ||||||||||||||||| ||| ||| ||||| |||| Sbjct: 40456 tatgcaattttctggtgggactgtatttcctggagcttgtgaagaagttaggcgttggag 40515 Query: 1611 cggtctatgcaggcttcggcggggtctccttgttgtccgcacttttcgcttacaatttca 1670 | ||||||||||| || || || || ||||| ||||| ||||||||||| |||||||||| Sbjct: 40516 ccgtctatgcaggttttggtggagtatccttcttgtcagcacttttcgcctacaatttca 40575 Query: 1671 tagttgagacaaaaggacgttctcttgaggaaattgagatgtctatgagccctgctgccc 1730 | || ||||| ||||||||||||||||||||||| || |||||| ||||||||||||||| Sbjct: 40576 ttgtcgagacgaaaggacgttctcttgaggaaatcgaaatgtctctgagccctgctgccc 40635 Query: 1731 ctgg 1734 |||| Sbjct: 40636 ctgg 40639 Score = 178 bits (90), Expect = 5e-41 Identities = 126/138 (91%) Strand = Plus / Plus Query: 1095 agttgcattgattggagggtcactgttctttctgcaacagtttgctggaataaatggtgt 1154 ||||||| ||||||||||||| || ||||||||||||||||||||||| |||||||| || Sbjct: 39129 agttgcactgattggagggtcccttttctttctgcaacagtttgctggcataaatggcgt 39188 Query: 1155 tctctatttttcatcattaacattccgtgatgttggtattaccagtggtgttttggcgag 1214 ||| || || |||||||||||||||| |||||||||||||||||||||| | ||||| || Sbjct: 39189 tctgtacttctcatcattaacattccatgatgttggtattaccagtggtatcttggcaag 39248 Query: 1215 cttatatgttggaataac 1232 |||||||||||||||||| Sbjct: 39249 cttatatgttggaataac 39266 Score = 119 bits (60), Expect = 4e-23 Identities = 84/92 (91%) Strand = Plus / Plus Query: 1463 ggaccagttactggaattatcatacctgagctgagcagtgcccggacacgctcaaaagtt 1522 ||||||||||| ||||| |||||||| |||||||| |||| ||||||||||| |||||| Sbjct: 40219 ggaccagttacaggaatcatcataccagagctgagtggtgctcggacacgctcgaaagtt 40278 Query: 1523 atggggttcagcttcactgtacattgggtatg 1554 ||||| |||||||||||||||||||||||||| Sbjct: 40279 atgggcttcagcttcactgtacattgggtatg 40310 Score = 87.7 bits (44), Expect = 2e-13 Identities = 71/80 (88%) Strand = Plus / Plus Query: 1242 aggggcacttgttgcttcaaatttgatggacaagcaaggacggaagaatcttttgatagg 1301 ||||||| |||||||||||| ||||||||| |||||||| || ||||| || |||| ||| Sbjct: 39346 aggggcaattgttgcttcaattttgatggataagcaaggtcgaaagaaactcttgacagg 39405 Query: 1302 gagctatcttggaatggtat 1321 ||||||||||||||||||| Sbjct: 39406 aagctatcttggaatggtat 39425 Score = 48.1 bits (24), Expect = 0.13 Identities = 72/88 (81%) Strand = Plus / Plus Query: 1350 ttgctatgttccttatagtgttttccatcagctttccccttgatgaaggcgttggacata 1409 |||| |||||||| ||||| | | | || ||||| |||||||||||||| ||| | ||| Sbjct: 39645 ttgcaatgttcctaatagtatatgctattagcttcccccttgatgaaggagttagccatg 39704 Query: 1410 ccctctcaattaccggaactcttttgta 1437 ||| |||||||| |||||||| ||||| Sbjct: 39705 gcctgtcaattactggaactctgttgta 39732
>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1163_C07 Length = 107121 Score = 145 bits (73), Expect = 8e-31 Identities = 100/109 (91%) Strand = Plus / Plus Query: 1095 agttgcattgattggagggtcactgttctttctgcaacagtttgctggaataaatggtgt 1154 ||||||| ||||||||||||| || ||||||||||||||||||||||| |||||||| || Sbjct: 107007 agttgcactgattggagggtcccttttctttctgcaacagtttgctggcataaatggcgt 107066 Query: 1155 tctctatttttcatcattaacattccgtgatgttggtattaccagtggt 1203 ||| || || |||||||||||||||| |||||||||||||||||||||| Sbjct: 107067 tctgtacttctcatcattaacattccatgatgttggtattaccagtggt 107115
>dbj|AK226802.1| Arabidopsis thaliana mRNA for sugar transporter like protein, complete cds, clone: RAFL07-90-H17 Length = 1874 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 633 ggaaggttccttgttggcattggaattggcgtgaataccgtgcttgttccaatatatatc 692 ||||| || |||||||| |||| |||||||| || || || ||||||||||||||||| Sbjct: 588 ggaagatttcttgttggtcttggtattggcgtcaacacagttcttgttccaatatatata 647 Query: 693 tctgaggttgctccaacaaaatacagagg 721 || ||||||||||| || ||||||||||| Sbjct: 648 tccgaggttgctccgacgaaatacagagg 676 Score = 52.0 bits (26), Expect = 0.008 Identities = 107/134 (79%) Strand = Plus / Plus Query: 373 atggccaatttcctctttggctaccacattggggtcatgaatggtccaatagaggatatt 432 ||||||||||| |||||||| || |||||||| || |||||||| || || | | |||| Sbjct: 321 atggccaattttctctttggttatcacattggagtgatgaatggccccatcgtgtctatt 380 Query: 433 gcacgagagcttggttttcaaggaaatccgtttctccaaggtcttgtggtcagcatattc 492 || || || ||||| ||| |||| ||| | |||| | |||||||| || |||||||| Sbjct: 381 gcgcgtgaacttgggtttgaaggcaattctattcttgagggtcttgttgtgagcatattt 440 Query: 493 attgtcggtgcatt 506 |||| ||||||||| Sbjct: 441 attgccggtgcatt 454 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1523 atggggttcagcttcactgtacattgggt 1551 ||||| ||||||||| ||||||||||||| Sbjct: 1427 atgggtttcagcttctctgtacattgggt 1455
>ref|NM_100382.2| Arabidopsis thaliana carbohydrate transporter/ sugar porter (AT1G05030) mRNA, complete cds Length = 1779 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 633 ggaaggttccttgttggcattggaattggcgtgaataccgtgcttgttccaatatatatc 692 ||||| || |||||||| |||| |||||||| || || || ||||||||||||||||| Sbjct: 561 ggaagatttcttgttggtcttggtattggcgtcaacacagttcttgttccaatatatata 620 Query: 693 tctgaggttgctccaacaaaatacagagg 721 || ||||||||||| || ||||||||||| Sbjct: 621 tccgaggttgctccgacgaaatacagagg 649 Score = 52.0 bits (26), Expect = 0.008 Identities = 107/134 (79%) Strand = Plus / Plus Query: 373 atggccaatttcctctttggctaccacattggggtcatgaatggtccaatagaggatatt 432 ||||||||||| |||||||| || |||||||| || |||||||| || || | | |||| Sbjct: 294 atggccaattttctctttggttatcacattggagtgatgaatggccccatcgtgtctatt 353 Query: 433 gcacgagagcttggttttcaaggaaatccgtttctccaaggtcttgtggtcagcatattc 492 || || || ||||| ||| |||| ||| | |||| | |||||||| || |||||||| Sbjct: 354 gcgcgtgaacttgggtttgaaggcaattctattcttgagggtcttgttgtgagcatattt 413 Query: 493 attgtcggtgcatt 506 |||| ||||||||| Sbjct: 414 attgccggtgcatt 427 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1523 atggggttcagcttcactgtacattgggt 1551 ||||| ||||||||| ||||||||||||| Sbjct: 1389 atgggtttcagcttctctgtacattgggt 1417
>gb|BT020194.1| Arabidopsis thaliana At1g05030 mRNA, complete cds Length = 1575 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 633 ggaaggttccttgttggcattggaattggcgtgaataccgtgcttgttccaatatatatc 692 ||||| || |||||||| |||| |||||||| || || || ||||||||||||||||| Sbjct: 529 ggaagatttcttgttggtcttggtattggcgtcaacacagttcttgttccaatatatata 588 Query: 693 tctgaggttgctccaacaaaatacagagg 721 || ||||||||||| || ||||||||||| Sbjct: 589 tccgaggttgctccgacgaaatacagagg 617 Score = 52.0 bits (26), Expect = 0.008 Identities = 107/134 (79%) Strand = Plus / Plus Query: 373 atggccaatttcctctttggctaccacattggggtcatgaatggtccaatagaggatatt 432 ||||||||||| |||||||| || |||||||| || |||||||| || || | | |||| Sbjct: 262 atggccaattttctctttggttatcacattggagtgatgaatggccccatcgtgtctatt 321 Query: 433 gcacgagagcttggttttcaaggaaatccgtttctccaaggtcttgtggtcagcatattc 492 || || || ||||| ||| |||| ||| | |||| | |||||||| || |||||||| Sbjct: 322 gcgcgtgaacttgggtttgaaggcaattctattcttgagggtcttgttgtgagcatattt 381 Query: 493 attgtcggtgcatt 506 |||| ||||||||| Sbjct: 382 attgccggtgcatt 395 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1523 atggggttcagcttcactgtacattgggt 1551 ||||| ||||||||| ||||||||||||| Sbjct: 1357 atgggtttcagcttctctgtacattgggt 1385
>gb|BT015814.1| Arabidopsis thaliana At1g05030 gene, complete cds Length = 1695 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 633 ggaaggttccttgttggcattggaattggcgtgaataccgtgcttgttccaatatatatc 692 ||||| || |||||||| |||| |||||||| || || || ||||||||||||||||| Sbjct: 535 ggaagatttcttgttggtcttggtattggcgtcaacacagttcttgttccaatatatata 594 Query: 693 tctgaggttgctccaacaaaatacagagg 721 || ||||||||||| || ||||||||||| Sbjct: 595 tccgaggttgctccgacgaaatacagagg 623 Score = 52.0 bits (26), Expect = 0.008 Identities = 107/134 (79%) Strand = Plus / Plus Query: 373 atggccaatttcctctttggctaccacattggggtcatgaatggtccaatagaggatatt 432 ||||||||||| |||||||| || |||||||| || |||||||| || || | | |||| Sbjct: 268 atggccaattttctctttggttatcacattggagtgatgaatggccccatcgtgtctatt 327 Query: 433 gcacgagagcttggttttcaaggaaatccgtttctccaaggtcttgtggtcagcatattc 492 || || || ||||| ||| |||| ||| | |||| | |||||||| || |||||||| Sbjct: 328 gcgcgtgaacttgggtttgaaggcaattctattcttgagggtcttgttgtgagcatattt 387 Query: 493 attgtcggtgcatt 506 |||| ||||||||| Sbjct: 388 attgccggtgcatt 401 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1523 atggggttcagcttcactgtacattgggt 1551 ||||| ||||||||| ||||||||||||| Sbjct: 1363 atgggtttcagcttctctgtacattgggt 1391
>emb|BX815649.1|CNS0AE0M Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS7ZG02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1779 Score = 73.8 bits (37), Expect = 2e-09 Identities = 76/89 (85%) Strand = Plus / Plus Query: 633 ggaaggttccttgttggcattggaattggcgtgaataccgtgcttgttccaatatatatc 692 ||||| || |||||||| |||| |||||||| || || || ||||||||||||||||| Sbjct: 561 ggaagatttcttgttggtcttggtattggcgtcaacacagttcttgttccaatatatatg 620 Query: 693 tctgaggttgctccaacaaaatacagagg 721 || ||||||||||| || ||||||||||| Sbjct: 621 tccgaggttgctccgacgaaatacagagg 649 Score = 52.0 bits (26), Expect = 0.008 Identities = 107/134 (79%) Strand = Plus / Plus Query: 373 atggccaatttcctctttggctaccacattggggtcatgaatggtccaatagaggatatt 432 ||||||||||| |||||||| || |||||||| || |||||||| || || | | |||| Sbjct: 294 atggccaattttctctttggttatcacattggagtgatgaatggccccatcgtgtctatt 353 Query: 433 gcacgagagcttggttttcaaggaaatccgtttctccaaggtcttgtggtcagcatattc 492 || || || ||||| ||| |||| ||| | |||| | |||||||| || |||||||| Sbjct: 354 gcgcgtgaacttgggtttgaaggcaattctattcttgagggtcttgttgtgagcatattt 413 Query: 493 attgtcggtgcatt 506 |||| ||||||||| Sbjct: 414 attgccggtgcatt 427 Score = 42.1 bits (21), Expect = 8.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1523 atggggttcagcttcactgtacattgggt 1551 ||||| ||||||||| ||||||||||||| Sbjct: 1387 atgggtttcagcttctctgtacattgggt 1415
>ref|NM_001052894.1| Oryza sativa (japonica cultivar-group) Os02g0229400 (Os02g0229400) mRNA, complete cds Length = 2932 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 1129 caacagtttgctggaataaatggtgttctctatt 1162 ||||||||||||||||||||||| |||||||||| Sbjct: 1893 caacagtttgctggaataaatggggttctctatt 1926
>dbj|AK120560.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132C18, full insert sequence Length = 2934 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 1129 caacagtttgctggaataaatggtgttctctatt 1162 ||||||||||||||||||||||| |||||||||| Sbjct: 1894 caacagtttgctggaataaatggggttctctatt 1927
>dbj|AK099716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013086B19, full insert sequence Length = 2378 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 1129 caacagtttgctggaataaatggtgttctctatt 1162 ||||||||||||||||||||||| |||||||||| Sbjct: 1405 caacagtttgctggaataaatggggttctctatt 1438
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 54.0 bits (27), Expect = 0.002 Identities = 30/31 (96%) Strand = Plus / Plus Query: 1132 cagtttgctggaataaatggtgttctctatt 1162 |||||||||||||||||||| |||||||||| Sbjct: 7276198 cagtttgctggaataaatggggttctctatt 7276228
>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0035N08 Length = 136267 Score = 54.0 bits (27), Expect = 0.002 Identities = 30/31 (96%) Strand = Plus / Plus Query: 1132 cagtttgctggaataaatggtgttctctatt 1162 |||||||||||||||||||| |||||||||| Sbjct: 52006 cagtttgctggaataaatggggttctctatt 52036
>gb|BT009593.1| Triticum aestivum clone wre1n.pk0062.g6:fis, full insert mRNA sequence Length = 1315 Score = 50.1 bits (25), Expect = 0.033 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1132 cagtttgctggaataaatggtgttctcta 1160 |||||||||||||||||||| |||||||| Sbjct: 236 cagtttgctggaataaatggagttctcta 264
>gb|AC005322.2|T7A14 Arabidopsis thaliana chromosome 1 BAC T7A14 sequence, complete sequence Length = 54157 Score = 50.1 bits (25), Expect = 0.033 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1523 atggggttcagcttcactgtacattgggtatgt 1555 ||||| ||||||||| ||||||||||||||||| Sbjct: 37930 atgggtttcagcttctctgtacattgggtatgt 37962 Score = 48.1 bits (24), Expect = 0.13 Identities = 57/68 (83%) Strand = Plus / Plus Query: 633 ggaaggttccttgttggcattggaattggcgtgaataccgtgcttgttccaatatatatc 692 ||||| || |||||||| |||| |||||||| || || || ||||||||||||||||| Sbjct: 36253 ggaagatttcttgttggtcttggtattggcgtcaacacagttcttgttccaatatatata 36312 Query: 693 tctgaggt 700 || ||||| Sbjct: 36313 tccgaggt 36320 Score = 42.1 bits (21), Expect = 8.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 373 atggccaatttcctctttggctaccacattggg 405 ||||||||||| |||||||| || ||||||||| Sbjct: 35518 atggccaattttctctttggttatcacattggg 35550
>gb|AY105508.1| Zea mays PCO114533 mRNA sequence Length = 2180 Score = 50.1 bits (25), Expect = 0.033 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1129 caacagtttgctggaataaatggtgttct 1157 |||||||||||||||||||| |||||||| Sbjct: 1205 caacagtttgctggaataaacggtgttct 1233
>emb|BX548062.37| Zebrafish DNA sequence from clone CH211-223K23 in linkage group 20, complete sequence Length = 89039 Score = 46.1 bits (23), Expect = 0.52 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1660 ttacaatttcatagttgagacaa 1682 ||||||||||||||||||||||| Sbjct: 21469 ttacaatttcatagttgagacaa 21447
>ref|NM_115008.1| Arabidopsis thaliana carbohydrate transporter/ nucleoside transporter/ sugar porter (AT3G51490) mRNA, complete cds Length = 2190 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1126 ctgcaacagtttgctggaataaatgg 1151 |||||||||||||| ||||||||||| Sbjct: 1561 ctgcaacagtttgcaggaataaatgg 1586
>emb|AL157367.15| Human DNA sequence from clone RP11-480P3 on chromosome 13, complete sequence Length = 85778 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1056 ggctagctggtcagaacttctg 1077 |||||||||||||||||||||| Sbjct: 40183 ggctagctggtcagaacttctg 40204
>gb|AF440619.1|AF440619 Homo sapiens 13q14 chronic lymphocytic leukemia suppressor locus section 1 of 2 Length = 350000 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1056 ggctagctggtcagaacttctg 1077 |||||||||||||||||||||| Sbjct: 252183 ggctagctggtcagaacttctg 252204
>gb|AF279660.2|AF279660 Homo sapiens CAR (RFP2) gene, complete cds; DLEU2 and DLEU1 genes, complete sequence; and RPL18 and p48/Hip pseudogenes, complete sequence Length = 347503 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1056 ggctagctggtcagaacttctg 1077 |||||||||||||||||||||| Sbjct: 204461 ggctagctggtcagaacttctg 204482
>gb|AC069475.27| Homo sapiens chromosome 13 clone 317g11 map 13q14, complete sequence Length = 153092 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1056 ggctagctggtcagaacttctg 1077 |||||||||||||||||||||| Sbjct: 152800 ggctagctggtcagaacttctg 152821
>gb|AC079045.2| Homo sapiens chromosome 13 clone ctd-2302o19 map 13q14, complete sequence Length = 110620 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1056 ggctagctggtcagaacttctg 1077 |||||||||||||||||||||| Sbjct: 78893 ggctagctggtcagaacttctg 78872
>emb|BX004761.10| Zebrafish DNA sequence from clone DKEY-11I10 in linkage group 20 Contains a novel gene and a CpG island, complete sequence Length = 132841 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1237 tttggaggggcacttgttgctt 1258 |||||||||||||||||||||| Sbjct: 24531 tttggaggggcacttgttgctt 24510
>emb|BX296553.6| Zebrafish DNA sequence from clone CH211-222G19 in linkage group 8, complete sequence Length = 108215 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1237 tttggaggggcacttgttgctt 1258 |||||||||||||||||||||| Sbjct: 67311 tttggaggggcacttgttgctt 67332
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1688 cgttctcttgaggaaattgaga 1709 |||||||||||||||||||||| Sbjct: 2874970 cgttctcttgaggaaattgaga 2874949
>emb|AJ532571.1|ATH532571 Arabidopsis thaliana mRNA for monosaccharide sensing protein 3 (mssp3 gene) Length = 2190 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1126 ctgcaacagtttgctggaataaatgg 1151 |||||||||||||| ||||||||||| Sbjct: 1561 ctgcaacagtttgcaggaataaatgg 1586
>emb|AL450169.1|CNS07EEW Genomic sequence at the putative B_CLL involved tumor suppressor gene locus on human chromosome 13q14.3 clone PAC 4E7,BAC 93D9,PAC 63H3 of library LLNL from chromosome 13 of Homo sapiens (human) Length = 279647 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1056 ggctagctggtcagaacttctg 1077 |||||||||||||||||||||| Sbjct: 89621 ggctagctggtcagaacttctg 89642
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1249 cttgttgcttcaaatttgatgg 1270 |||||||||||||||||||||| Sbjct: 1565770 cttgttgcttcaaatttgatgg 1565749
>gb|EF040137.1| Synthetic construct Bacillus anthracis clone FLH247503.01L uppS gene, complete sequence Length = 777 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1005 ggagaaggccatggaagaaatgaaa 1029 |||||||||||||||||||| |||| Sbjct: 408 ggagaaggccatggaagaaacgaaa 432
>ref|XM_001026847.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_01071480) mRNA, complete cds Length = 1035 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 827 ttggcttttctgctatgttaatgat 851 |||| |||||||||||||||||||| Sbjct: 788 ttgggttttctgctatgttaatgat 812
>emb|CU024864.5| M.truncatula DNA sequence from clone MTH2-9F11 on chromosome 3, complete sequence Length = 75871 Score = 42.1 bits (21), Expect = 8.1 Identities = 57/69 (82%) Strand = Plus / Plus Query: 632 gggaaggttccttgttggcattggaattggcgtgaataccgtgcttgttccaatatatat 691 |||||| || ||||||||| |||| || || || ||| | || ||||||||||| ||||| Sbjct: 71796 gggaagatttcttgttggccttggtataggtgtaaatgctgttcttgttccaatttatat 71855 Query: 692 ctctgaggt 700 |||||||| Sbjct: 71856 atctgaggt 71864 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 697 aggttgctccaacaaaatacagagg 721 ||||||||||||||||||| ||||| Sbjct: 72083 aggttgctccaacaaaatatagagg 72107
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1005 ggagaaggccatggaagaaatgaaa 1029 |||||||||||||||||||| |||| Sbjct: 3660914 ggagaaggccatggaagaaacgaaa 3660890
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1005 ggagaaggccatggaagaaatgaaa 1029 |||||||||||||||||||| |||| Sbjct: 3639370 ggagaaggccatggaagaaacgaaa 3639346
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1005 ggagaaggccatggaagaaatgaaa 1029 |||||||||||||||||||| |||| Sbjct: 3639938 ggagaaggccatggaagaaacgaaa 3639914
>gb|AC147370.4| Mus musculus BAC clone RP24-243N3 from chromosome 12, complete sequence Length = 162528 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1115 cactgttctttctgcaacagt 1135 ||||||||||||||||||||| Sbjct: 65805 cactgttctttctgcaacagt 65825
>gb|AC102062.9| Mus musculus chromosome 19, clone RP23-217B9, complete sequence Length = 253774 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1051 tcacaggctagctggtcagaa 1071 ||||||||||||||||||||| Sbjct: 238661 tcacaggctagctggtcagaa 238681
>gb|AC125202.3| Mus musculus BAC clone RP23-231N20 from chromosome 19, complete sequence Length = 207191 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1051 tcacaggctagctggtcagaa 1071 ||||||||||||||||||||| Sbjct: 19988 tcacaggctagctggtcagaa 20008
>gb|AC122430.4| Mus musculus BAC clone RP24-176F14 from chromosome 12, complete sequence Length = 172764 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1115 cactgttctttctgcaacagt 1135 ||||||||||||||||||||| Sbjct: 7424 cactgttctttctgcaacagt 7404
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1005 ggagaaggccatggaagaaatgaaa 1029 |||||||||||||||||||| |||| Sbjct: 3719796 ggagaaggccatggaagaaacgaaa 3719772
>gb|AC116634.5| Homo sapiens BAC clone RP11-462G13 from 4, complete sequence Length = 85439 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 969 aaaagtggtagagaatatttg 989 ||||||||||||||||||||| Sbjct: 22304 aaaagtggtagagaatatttg 22284
>emb|BX855614.13| Zebrafish DNA sequence from clone DKEY-262G12 in linkage group 4, complete sequence Length = 157594 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1733 ggggaacgaaaatagaactgg 1753 ||||||||||||||||||||| Sbjct: 11294 ggggaacgaaaatagaactgg 11274
>gb|AC096542.2| Homo sapiens chromosome 1 clone RP11-332L18, complete sequence Length = 189411 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1421 accggaactcttttgtacatt 1441 ||||||||||||||||||||| Sbjct: 115247 accggaactcttttgtacatt 115227
>gb|AC096861.5| Homo sapiens 3 BAC RP11-592P9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 99179 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 884 ctggttttttcattgttgttg 904 ||||||||||||||||||||| Sbjct: 54542 ctggttttttcattgttgttg 54562
>gb|AC107934.3| Homo sapiens chromosome 8, clone RP11-960H2, complete sequence Length = 161638 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 370 tccatggccaatttcctcttt 390 ||||||||||||||||||||| Sbjct: 46060 tccatggccaatttcctcttt 46080
>gb|AC044814.6| Homo sapiens chromosome 8, clone RP11-688B7, complete sequence Length = 186369 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 tccatggccaatttcctcttt 390 ||||||||||||||||||||| Sbjct: 101283 tccatggccaatttcctcttt 101263
>gb|AC021081.5| Homo sapiens chromosome 5 clone CTC-213A3, complete sequence Length = 71823 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1716 tgagccctgctgcccctgggg 1736 ||||||||||||||||||||| Sbjct: 44030 tgagccctgctgcccctgggg 44010
>gb|AC010317.5| Homo sapiens chromosome 5 clone CTB-88J14, complete sequence Length = 149115 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1716 tgagccctgctgcccctgggg 1736 ||||||||||||||||||||| Sbjct: 113130 tgagccctgctgcccctgggg 113110
>gb|AC132265.4| Mus musculus BAC clone RP24-373J20 from chromosome 10, complete sequence Length = 178780 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 885 tggttttttcattgttgttgg 905 ||||||||||||||||||||| Sbjct: 84044 tggttttttcattgttgttgg 84064
>gb|AC073912.38| Homo sapiens 12 BAC RP11-989F5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 211550 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1152 tgttctctatttttcatcatt 1172 ||||||||||||||||||||| Sbjct: 116981 tgttctctatttttcatcatt 116961
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1005 ggagaaggccatggaagaaatgaaa 1029 |||||||||||||||||||| |||| Sbjct: 3639243 ggagaaggccatggaagaaacgaaa 3639219
>gb|AC151999.5| Mus musculus BAC clone RP23-98D11 from chromosome 8, complete sequence Length = 229414 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1054 caggctagctggtcagaacttctgg 1078 ||||||||||||||| ||||||||| Sbjct: 190038 caggctagctggtcacaacttctgg 190014
>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome Length = 1799146 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 425 aggatattgcacgagagcttg 445 ||||||||||||||||||||| Sbjct: 1111449 aggatattgcacgagagcttg 1111469
>emb|AL929433.10| Mouse DNA sequence from clone RP23-193M23 on chromosome 4, complete sequence Length = 198426 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1512 gctcaaaagttatggggttcagctt 1536 |||||||||||||||| |||||||| Sbjct: 179543 gctcaaaagttatgggattcagctt 179567
>emb|AL450399.16| Mouse DNA sequence from clone RP23-286I5 on chromosome X, complete sequence Length = 207922 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 539 attatttaggttgtaaaagga 559 ||||||||||||||||||||| Sbjct: 95900 attatttaggttgtaaaagga 95880 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 380,167,409 Number of extensions: 19346508 Number of successful extensions: 103140 Number of sequences better than 10.0: 62 Number of HSP's gapped: 103137 Number of HSP's successfully gapped: 124 Length of query: 2122 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2099 Effective length of database: 18,503,978,556 Effective search space: 38839850989044 Effective search space used: 38839850989044 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
