ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf45j07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Y08529:Os05g0111300 | 32 | 0.41 | 2 | U77294:Os05g0111300 | 32 | 0.41 | 3 | U57638:Os05g0111300 | 32 | 0.41 | 4 | AK119721:Os05g0111300 | 32 | 0.41 | 5 | AK119630:Os05g0111300 | 32 | 0.41 | 6 | AK058529:Os05g0111300 | 32 | 0.41 | 7 | AK119241:Os05g0111300 | 30 | 1.6 | 8 | AK105293:Os02g0528900 | 29 | 2.0 | 9 | D21111:Os05g0111300 | 28 | 3.5 | 10 | AK104859:Os03g0160200 | 27 | 7.8 | 11 | AK100712:Os03g0160200 | 27 | 7.8 | 12 | AK071081:Os03g0160200 | 27 | 7.8 | 13 | AK064836:Os03g0160200 | 27 | 7.8 |
|---|
>Y08529:Os05g0111300 | Length = 84 Score = 31.6 bits (70), Expect = 0.41 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +2 Query: 152 KMFPDVEATAGAAAMVMPTASHKGSS 229 KMFPDVEATA V+ S+K SS Sbjct: 24 KMFPDVEATATTKTFVLAAPSNKASS 49
>U77294:Os05g0111300 | Length = 84 Score = 31.6 bits (70), Expect = 0.41 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +2 Query: 152 KMFPDVEATAGAAAMVMPTASHKGSS 229 KMFPDVEATA V+ S+K SS Sbjct: 24 KMFPDVEATATTKTFVLAAPSNKASS 49
>U57638:Os05g0111300 | Length = 84 Score = 31.6 bits (70), Expect = 0.41 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +2 Query: 152 KMFPDVEATAGAAAMVMPTASHKGSS 229 KMFPDVEATA V+ S+K SS Sbjct: 24 KMFPDVEATATTKTFVLAAPSNKASS 49
>AK119721:Os05g0111300 | Length = 84 Score = 31.6 bits (70), Expect = 0.41 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +2 Query: 152 KMFPDVEATAGAAAMVMPTASHKGSS 229 KMFPDVEATA V+ S+K SS Sbjct: 24 KMFPDVEATATTKTFVLAAPSNKASS 49
>AK119630:Os05g0111300 | Length = 84 Score = 31.6 bits (70), Expect = 0.41 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +2 Query: 152 KMFPDVEATAGAAAMVMPTASHKGSS 229 KMFPDVEATA V+ S+K SS Sbjct: 24 KMFPDVEATATTKTFVLAAPSNKASS 49
>AK058529:Os05g0111300 | Length = 84 Score = 31.6 bits (70), Expect = 0.41 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +2 Query: 152 KMFPDVEATAGAAAMVMPTASHKGSS 229 KMFPDVEATA V+ S+K SS Sbjct: 24 KMFPDVEATATTKTFVLAAPSNKASS 49
>AK119241:Os05g0111300 | Length = 54 Score = 29.6 bits (65), Expect = 1.6 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = +2 Query: 152 KMFPDVEATAGAAAMVMPTASHKGSS 229 KMFPDVEATA V+ S+K S Sbjct: 24 KMFPDVEATATTKTFVLAAPSNKACS 49
>AK105293:Os02g0528900 | Length = 302 Score = 29.3 bits (64), Expect = 2.0 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%) Frame = -3 Query: 569 IKAEAPCIFRIGGMRKDTLVERYTQGIQN*RTRRRFYFIQRARMQRL------LMIRWR 411 + +EA + R+G ++ LVER IQ R R QR RM+R+ + +RWR Sbjct: 84 LSSEAVDVRRLGAAQRRVLVERLVADIQ--RDNLRLLRKQRRRMERVGVRQPTVEVRWR 140
>D21111:Os05g0111300 | Length = 46 Score = 28.5 bits (62), Expect = 3.5 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +2 Query: 152 KMFPDVEATAGAAAMVMPTASHK 220 KMFPDVEATA V+ S+K Sbjct: 24 KMFPDVEATATTKTFVLAAPSNK 46
>AK104859:Os03g0160200 | Length = 186 Score = 27.3 bits (59), Expect = 7.8 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +2 Query: 26 HSSQHIAFLPSPPPTKERSMS 88 HSS I LPSPPP R+ S Sbjct: 45 HSSVSIGILPSPPPPPARTYS 65
>AK100712:Os03g0160200 | Length = 186 Score = 27.3 bits (59), Expect = 7.8 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +2 Query: 26 HSSQHIAFLPSPPPTKERSMS 88 HSS I LPSPPP R+ S Sbjct: 45 HSSVSIGILPSPPPPPARTYS 65
>AK071081:Os03g0160200 | Length = 186 Score = 27.3 bits (59), Expect = 7.8 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +2 Query: 26 HSSQHIAFLPSPPPTKERSMS 88 HSS I LPSPPP R+ S Sbjct: 45 HSSVSIGILPSPPPPPARTYS 65
>AK064836:Os03g0160200 | Length = 186 Score = 27.3 bits (59), Expect = 7.8 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +2 Query: 26 HSSQHIAFLPSPPPTKERSMS 88 HSS I LPSPPP R+ S Sbjct: 45 HSSVSIGILPSPPPPPARTYS 65 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 11,930,341 Number of extensions: 231169 Number of successful extensions: 983 Number of sequences better than 10.0: 13 Number of HSP's gapped: 980 Number of HSP's successfully gapped: 13 Length of query: 197 Length of database: 15,399,855 Length adjustment: 95 Effective length of query: 102 Effective length of database: 11,595,960 Effective search space: 1182787920 Effective search space used: 1182787920 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
