ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf45j07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P93433:MT2C_ORYSA Metallothionein-like protein 2C - Oryza sativa... 32 2.2

>P93433:MT2C_ORYSA Metallothionein-like protein 2C - Oryza sativa (Rice)|
          Length = 84
 Score = 31.6 bits (70), Expect = 2.2
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +2

Query: 152 KMFPDVEATAGAAAMVMPTASHKGSS 229
           KMFPDVEATA     V+   S+K SS
Sbjct: 24  KMFPDVEATATTKTFVLAAPSNKASS 49


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 65,797,375
Number of extensions: 1131066
Number of successful extensions: 3001
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2998
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 100,686,439
Length adjustment: 107
Effective length of query: 90
Effective length of database: 71,336,874
Effective search space: 6420318660
Effective search space used: 6420318660
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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