ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf42k04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os05g0337400:Os05g0337400 148 3e-36
2AK108150: 33 0.16
3AK111996:Os04g0566500 31 0.80
4AK111587:Os04g0566500 31 0.80
5AK111504:Os04g0566500 31 0.80
6AK102911:Os04g0566500 31 0.80
7Os05g0448300:Os05g0448300 29 2.3
8AK121165:Os03g0826200 28 5.2
9Os03g0819500:Os03g0819500 28 6.7
10AY373258:Os05g0533600 28 6.8
11AY224560:Os05g0533600 28 6.8
12AK067577:Os05g0533600 28 6.8
13AK064036:Os03g0831200 27 8.9

>Os05g0337400:Os05g0337400 |
          Length = 346
 Score =  148 bits (374), Expect = 3e-36
 Identities = 76/84 (90%), Positives = 82/84 (97%)
 Frame = +2

Query: 227 SLILYFKAEGTMEERAIPKITQALEGMDGVSDLEVLVEEGIGSVVLTKATTVQATGVASN 406
           SLILYFKAEGTMEERAIPKITQALEG++GVSDLEVL+EEGIGSVVLTK TTVQATGVASN
Sbjct: 62  SLILYFKAEGTMEERAIPKITQALEGVEGVSDLEVLIEEGIGSVVLTKETTVQATGVASN 121

Query: 407 LVEAIQGVGFKLQTLSLSFEDFDK 478
           LVEAIQG GFKLQTLSLSF+DF++
Sbjct: 122 LVEAIQGAGFKLQTLSLSFDDFNE 145



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>AK108150: |
          Length = 156

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -1

Query: 174 TSRRPLRLGAAPVATRGSCREARRGSRGAADAE-RRRRWVEAGD 46
           T +RP R   APV  R     A RG R   D E RRR    AGD
Sbjct: 89  THKRPARPARAPVGGRDGAYRAPRGDRDGGDREYRRRDGAAAGD 132



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>AK111996:Os04g0566500 |
          Length = 749

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +1

Query: 292 GSRGDGWRQ*PGGARRRRHRKCCVNEGDNGPSYRGGLKPGGSHPG 426
           G RG G  Q  GG  + R  +   + G   P Y+G   PG  HPG
Sbjct: 66  GGRGGGQYQGRGGHYQGRGGQGSHHPGGGPPEYQGRGGPGSHHPG 110



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>AK111587:Os04g0566500 |
          Length = 1101

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +1

Query: 292 GSRGDGWRQ*PGGARRRRHRKCCVNEGDNGPSYRGGLKPGGSHPG 426
           G RG G  Q  GG  + R  +   + G   P Y+G   PG  HPG
Sbjct: 49  GGRGGGQYQGRGGHYQGRGGQGSHHPGGGPPEYQGRGGPGSHHPG 93



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>AK111504:Os04g0566500 |
          Length = 1101

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +1

Query: 292 GSRGDGWRQ*PGGARRRRHRKCCVNEGDNGPSYRGGLKPGGSHPG 426
           G RG G  Q  GG  + R  +   + G   P Y+G   PG  HPG
Sbjct: 49  GGRGGGQYQGRGGHYQGRGGQGSHHPGGGPPEYQGRGGPGSHHPG 93



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>AK102911:Os04g0566500 |
          Length = 919

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +1

Query: 292 GSRGDGWRQ*PGGARRRRHRKCCVNEGDNGPSYRGGLKPGGSHPG 426
           G RG G  Q  GG  + R  +   + G   P Y+G   PG  HPG
Sbjct: 49  GGRGGGQYQGRGGHYQGRGGQGSHHPGGGPPEYQGRGGPGSHHPG 93



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>Os05g0448300:Os05g0448300 |
          Length = 498

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -1

Query: 174 TSRRPLRLGAAPV-ATRGSCREARRGSRGAADAERRRRWVEAGDDIV 37
           +SR P  L A+PV A    CRE  R      DA+R RR +E G DIV
Sbjct: 347 SSRLPEALTASPVKAAVALCRERDR------DADRVRRLLEEGVDIV 387



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>AK121165:Os03g0826200 |
          Length = 79

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +1

Query: 280 QDHPGSRGDGWRQ*P-GGARRRRHRKCCVNEGDNGPSYRGGLKPGGS 417
           Q   G RG  WR  P GG+RRRR R+     G          KP  S
Sbjct: 12  QSGGGRRGWRWRSAPRGGSRRRRRRRRASPSGSTVSRKAPAKKPAAS 58



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>Os03g0819500:Os03g0819500 |
          Length = 365

 Score = 27.7 bits (60), Expect = 6.7
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
 Frame = +2

Query: 248 AEGTMEERAIPKITQALEGMDGVS-------DLEVLVEEGIGSVVLTKATTVQATGVASN 406
           A     E+A P +T    G  G +       +  V V+EG   +V+   T  Q   +  N
Sbjct: 148 ASSKQTEQASPDLTLEFGGGGGRAAVALKPENASVTVQEGTLCLVIVATTKQQPVSILGN 207

Query: 407 LVEAIQGVGFKLQTLSLSFEDFD 475
           L +    VG+ L   +++F   D
Sbjct: 208 LAQQNIHVGYDLDAGTVTFATAD 230



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>AY373258:Os05g0533600 |
          Length = 915

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
 Frame = -1

Query: 156 RLGAAPVATRG----SCREARRGSRGAADAERR 70
           RL  +PVA R     SCR  RRG R AA+  R+
Sbjct: 18  RLAPSPVAARRRLLVSCRARRRGLRTAAELPRK 50



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>AY224560:Os05g0533600 |
          Length = 915

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
 Frame = -1

Query: 156 RLGAAPVATRG----SCREARRGSRGAADAERR 70
           RL  +PVA R     SCR  RRG R AA+  R+
Sbjct: 18  RLAPSPVAARRRLLVSCRARRRGLRTAAELPRK 50



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>AK067577:Os05g0533600 |
          Length = 915

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
 Frame = -1

Query: 156 RLGAAPVATRG----SCREARRGSRGAADAERR 70
           RL  +PVA R     SCR  RRG R AA+  R+
Sbjct: 18  RLAPSPVAARRRLLVSCRARRRGLRTAAELPRK 50



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>AK064036:Os03g0831200 |
          Length = 194

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 328 GARRRRHRKCCVNEGDNGPSYRGGLKPGGSHPG 426
           GARRRR R+    E +     RGG   G  H G
Sbjct: 113 GARRRRGRRGAAGEEEEQEGERGGGDHGAPHGG 145


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 12,315,961
Number of extensions: 209343
Number of successful extensions: 1089
Number of sequences better than 10.0: 13
Number of HSP's gapped: 1085
Number of HSP's successfully gapped: 13
Length of query: 213
Length of database: 15,399,855
Length adjustment: 96
Effective length of query: 117
Effective length of database: 11,555,919
Effective search space: 1352042523
Effective search space used: 1352042523
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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