ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf42k04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001061773.1| Oryza sativa (japonica cultivar-group) Os05g... 333 5e-88
2gb|AY105710.1| Zea mays PCO106965 mRNA sequence 270 6e-69
3gb|AC134342.2| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
5gb|AY945226.1|AY945226S1 Bos taurus mitochondrial glycerol phosp... 48 0.039
6gb|CP000479.1| Mycobacterium avium 104, complete genome 46 0.15
7emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete se... 46 0.15
8gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 46 0.15
9gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 44 0.60
10dbj|D16435.1|HPCT2 Hepatitis C virus type 2 gene for polyprotein... 44 0.60
11emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete ... 44 0.60
12emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete ... 44 0.60
13gb|AC090518.2|AC090518 Homo sapiens chromosome 15 clone RP11-566... 44 0.60
14dbj|D89872.1| Hepatitis C virus RNA for polyprotein, complete cds 44 0.60
15dbj|AP003971.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 44 0.60
16tpg|BK000394.1| TPA_inf: Human herpesvirus 5 strain AD169, compl... 42 2.4
17gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 2.4
18gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 2.4
19dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
20emb|BX470172.19| Zebrafish DNA sequence from clone DKEY-3H3 in l... 42 2.4
21emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complet... 42 2.4
22emb|X04650.1|HEHCMVU Human cytomegalovirus (HCMV) short unique r... 42 2.4
23emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 2.4
24emb|BX470118.9| Zebrafish DNA sequence from clone DKEY-207E22 in... 42 2.4
25emb|AL928775.2|CNS08CC5 Oryza sativa chromosome 12, . BAC OSJNBa... 42 2.4
26emb|AL935116.6| Mouse DNA sequence from clone RP23-59I2 on chrom... 42 2.4
27emb|AL845543.5| Mouse DNA sequence from clone RP23-257O6 on chro... 42 2.4
28emb|AL691424.7| Mouse DNA sequence from clone RP23-219K12 on chr... 42 2.4
29ref|XM_521591.2| PREDICTED: Pan troglodytes paired-like homeodom... 40 9.4
30gb|DQ895132.1| Homo sapiens clone FLH181657.01L; RZPDo839F10135D... 40 9.4
31gb|DQ895131.1| Homo sapiens clone FLH181652.01L; RZPDo839F09135D... 40 9.4
32gb|DQ891945.1| Synthetic construct Homo sapiens clone FLH181661.... 40 9.4
33emb|CR932982.5| Zebrafish DNA sequence from clone ZFOS-889F12 in... 40 9.4
34gb|DQ397847.1| Cenarchaeum symbiosum clone C07F03, complete sequ... 40 9.4
35gb|AC120020.9| Mus musculus chromosome 16, clone RP24-251L14, co... 40 9.4
36gb|AC146938.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.4
37gb|AC160987.4| Mus musculus BAC clone RP23-248O24 from chromosom... 40 9.4
38gb|AC102469.7| Mus musculus chromosome 1, clone RP24-356O3, comp... 40 9.4
39ref|NM_133452.1| Homo sapiens ribonucleoprotein, PTB-binding 1 (... 40 9.4
40gb|AC091001.3| Papio anubis clone RP41-36M16, complete sequence 40 9.4
41dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 9.4
42gb|BC037565.1| Homo sapiens ribonucleoprotein, PTB-binding 1, mR... 40 9.4
43gb|AC023503.23| Homo sapiens 3 BAC RP11-217I10 (Roswell Park Can... 40 9.4
44gb|AC011511.12| Homo sapiens chromosome 19 clone CTD-2369P2, com... 40 9.4
45dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
46dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
47dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
48emb|AL160011.35| Human DNA sequence from clone RP11-242B12 on ch... 40 9.4
49gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 9.4
50emb|AL662995.2|OSJN00202 Oryza sativa genomic DNA, chromosome 4,... 40 9.4
51emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4,... 40 9.4
52emb|AL662810.16| Mouse DNA sequence from clone RP23-42P24 on chr... 40 9.4
53emb|AL672018.6| Mouse DNA sequence from clone RP23-365O24 on chr... 40 9.4
54emb|AL845420.7| Zebrafish DNA sequence from clone CH211-203K16 i... 40 9.4
55gb|AC020763.6| Homo sapiens chromosome 16 clone RP11-394B2, comp... 40 9.4
56dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 9.4
57emb|CR590285.1| full-length cDNA clone CS0DL007YM08 of B cells (... 40 9.4
58dbj|AP005479.4| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
59ref|NM_174610.2| Bos taurus solute carrier family 6 (neurotransm... 40 9.4
60ref|NM_005029.3| Homo sapiens paired-like homeodomain transcript... 40 9.4
61gb|BC011642.2| Homo sapiens paired-like homeodomain transcriptio... 40 9.4
62gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 9.4
63gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 9.4
64emb|CT485613.9| Mouse DNA sequence from clone RP23-140I12 on chr... 40 9.4
65gb|AF041339.1|AF041339 Homo sapiens homeodomain protein (PITX3) ... 40 9.4
66gb|AC140338.3| Mus musculus BAC clone RP23-240M3 from 10, comple... 40 9.4
67emb|AM049177.1| Pedomicrobium sp. ACM 3067 manganese oxidation o... 40 9.4
68gb|AC087782.34| Mus musculus strain C57BL/6J chromosome 16 clone... 40 9.4
69emb|AL672285.8| Mouse DNA sequence from clone RP23-45G5 on chrom... 40 9.4
70dbj|AB075858.1| Homo sapiens mRNA for KIAA1978 protein 40 9.4
71emb|AL671732.15| Mouse DNA sequence from clone RP23-309O6 on chr... 40 9.4 
>ref|NM_001061773.1| Oryza sativa (japonica cultivar-group) Os05g0337400 (Os05g0337400)
           mRNA, complete cds
          Length = 1041
 Score =  333 bits (168), Expect = 5e-88
 Identities = 231/252 (91%)
 Strand = Plus / Plus

                                                                       
Query: 214 ctacaccaccgagtccctcatcctctacttcaaggcggagggcaccatggaggagagggc 273
           ||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 171 ctacacctccgactccctcatcctctacttcaaggcggagggtaccatggaggagagggc 230

                                                                       
Query: 274 cattcccaagatcacccaggctctcgaggggatggatggcgtcagtgacctggaggtgct 333
           ||| ||||||||||||||||| ||||||||| |||| || || || ||||||||||||||
Sbjct: 231 catccccaagatcacccaggccctcgagggggtggagggggtgagcgacctggaggtgct 290

                                                                       
Query: 334 cgtcgaagaaggcatcggaagtgttgtgttaacgaaggcgacaacggtccaagctaccgg 393
           | |||| ||||||||||||||||||||||| || |||| ||| ||||| |||||||||||
Sbjct: 291 catcgaggaaggcatcggaagtgttgtgttgacaaaggagacgacggtgcaagctaccgg 350

                                                                       
Query: 394 ggtggcctcaaacctggtggaagccatccagggagttggtttcaagctgcaaactcttag 453
           |||||||||||||||||| |||||||||||||||| ||| |||||||||||||| |||||
Sbjct: 351 ggtggcctcaaacctggtagaagccatccagggagctggcttcaagctgcaaacacttag 410

                       
Query: 454 cctcagcttcga 465
           ||||||||||||
Sbjct: 411 cctcagcttcga 422
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>gb|AY105710.1| Zea mays PCO106965 mRNA sequence
          Length = 687

 Score =  270 bits (136), Expect = 6e-69
 Identities = 261/302 (86%), Gaps = 3/302 (0%)
 Strand = Plus / Plus

                                                                       
Query: 174 tggtccgcgcggccaccgcggaggcggccgaggcccccgcctacaccaccgagtccctca 233
           |||| ||||||||||||| ||| || ||   ||| |||||||||||| |||| |||||||
Sbjct: 201 tggtgcgcgcggccaccgtggatgctgc---ggcgcccgcctacacctccgattccctca 257

                                                                       
Query: 234 tcctctacttcaaggcggagggcaccatggaggagagggccattcccaagatcacccagg 293
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |  
Sbjct: 258 tcctctacttcaaggcggagggcaccatggaggagagggccattcccaagatcacagaat 317

                                                                       
Query: 294 ctctcgaggggatggatggcgtcagtgacctggaggtgctcgtcgaagaaggcatcggaa 353
           |||| ||||| ||||| || ||||  ||||||||||||||| | ||||||||||| || |
Sbjct: 318 ctcttgagggtatggagggagtcaaggacctggaggtgctcattgaagaaggcataggga 377

                                                                       
Query: 354 gtgttgtgttaacgaaggcgacaacggtccaagctaccggggtggcctcaaacctggtgg 413
           | ||||||||||| |||| |||||| || |||||||| || || ||||| ||||||||||
Sbjct: 378 gcgttgtgttaacaaaggagacaactgtgcaagctactggagtagcctcgaacctggtgg 437

                                                                       
Query: 414 aagccatccagggagttggtttcaagctgcaaactcttagcctcagcttcgaggacttcg 473
           |||| |||||||||| ||| ||||||||||||||||| ||| | |||||||| || ||||
Sbjct: 438 aagctatccagggagctgggttcaagctgcaaactctaagcttgagcttcgatgatttcg 497

             
Query: 474 ac 475
           ||
Sbjct: 498 ac 499
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>gb|AC134342.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0053E01, complete sequence
          Length = 180426

 Score =  139 bits (70), Expect = 1e-29
 Identities = 91/98 (92%)
 Strand = Plus / Minus

                                                                         
Query: 368   aaggcgacaacggtccaagctaccggggtggcctcaaacctggtggaagccatccaggga 427
             |||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 27600 aaggagacgacggtgcaagctaccggggtggcctcaaacctggtagaagccatccaggga 27541

                                                   
Query: 428   gttggtttcaagctgcaaactcttagcctcagcttcga 465
             | ||| |||||||||||||| |||||||||||||||||
Sbjct: 27540 gctggcttcaagctgcaaacacttagcctcagcttcga 27503



 Score =  137 bits (69), Expect = 5e-29
 Identities = 84/89 (94%)
 Strand = Plus / Minus

                                                                         
Query: 214   ctacaccaccgagtccctcatcctctacttcaaggcggagggcaccatggaggagagggc 273
             ||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 29967 ctacacctccgactccctcatcctctacttcaaggcggagggtaccatggaggagagggc 29908

                                          
Query: 274   cattcccaagatcacccaggctctcgagg 302
             ||| ||||||||||||||||| |||||||
Sbjct: 29907 catccccaagatcacccaggccctcgagg 29879



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                       
Query: 320   gacctggaggtgctcgtcgaagaaggcatcggaagtgttgtg 361
             ||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 29718 gacctggaggtgctcatcgaggaaggcatcggaagtgttgtg 29677
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score =  139 bits (70), Expect = 1e-29
 Identities = 91/98 (92%)
 Strand = Plus / Minus

                                                                            
Query: 368      aaggcgacaacggtccaagctaccggggtggcctcaaacctggtggaagccatccaggga 427
                |||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 15635496 aaggagacgacggtgcaagctaccggggtggcctcaaacctggtagaagccatccaggga 15635437

                                                      
Query: 428      gttggtttcaagctgcaaactcttagcctcagcttcga 465
                | ||| |||||||||||||| |||||||||||||||||
Sbjct: 15635436 gctggcttcaagctgcaaacacttagcctcagcttcga 15635399



 Score =  137 bits (69), Expect = 5e-29
 Identities = 84/89 (94%)
 Strand = Plus / Minus

                                                                            
Query: 214      ctacaccaccgagtccctcatcctctacttcaaggcggagggcaccatggaggagagggc 273
                ||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 15637863 ctacacctccgactccctcatcctctacttcaaggcggagggtaccatggaggagagggc 15637804

                                             
Query: 274      cattcccaagatcacccaggctctcgagg 302
                ||| ||||||||||||||||| |||||||
Sbjct: 15637803 catccccaagatcacccaggccctcgagg 15637775



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                          
Query: 320      gacctggaggtgctcgtcgaagaaggcatcggaagtgttgtg 361
                ||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 15637614 gacctggaggtgctcatcgaggaaggcatcggaagtgttgtg 15637573
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>gb|AY945226.1|AY945226S1 Bos taurus mitochondrial glycerol phosphate acyltransferase (GPAM)
            gene, exons 1 through 6; nuclear gene for mitochondrial
            product
          Length = 12030

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 588  ttcaatatttcttcagatatttct 611
            ||||||||||||||||||||||||
Sbjct: 2416 ttcaatatttcttcagatatttct 2439
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>gb|CP000479.1| Mycobacterium avium 104, complete genome
          Length = 5475491

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 176     gtccgcgcggccaccgcggaggc 198
               |||||||||||||||||||||||
Sbjct: 2142005 gtccgcgcggccaccgcggaggc 2141983
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>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence
          Length = 7497934

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 184     ggccaccgcggaggcggccgaggcccccgcc 214
               |||||||||||||||||||| |||| |||||
Sbjct: 6992420 ggccaccgcggaggcggccgcggccaccgcc 6992450
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 176     gtccgcgcggccaccgcggaggc 198
               |||||||||||||||||||||||
Sbjct: 2263427 gtccgcgcggccaccgcggaggc 2263449
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 457   cagcttcgaggacttcgacaaggccg 482
             ||||||||||||||||||||| ||||
Sbjct: 53354 cagcttcgaggacttcgacaaagccg 53379
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>dbj|D16435.1|HPCT2 Hepatitis C virus type 2 gene for polyprotein precursor
            (NS2-NS3-NS4A-NS4B-NS5A-NS5B), complete cds
          Length = 6935

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 37   gacgatgtcgtcgccggcctcc 58
            ||||||||||||||||||||||
Sbjct: 5083 gacgatgtcgtcgccggcctcc 5062
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>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29
          Length = 310550

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 183   cggccaccgcggaggcggccgaggcccccg 212
             ||||| |||| |||||||||||||||||||
Sbjct: 94263 cggcccccgccgaggcggccgaggcccccg 94234
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>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29
          Length = 298450

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 189    ccgcggaggcggccgaggcccccgcc 214
              ||||| ||||||||||||||||||||
Sbjct: 229916 ccgcgtaggcggccgaggcccccgcc 229941
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>gb|AC090518.2|AC090518 Homo sapiens chromosome 15 clone RP11-566D24 map 15q21.3, complete
              sequence
          Length = 188644

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 402    caaacctggtggaagccatccaggga 427
              |||| |||||||||||||||||||||
Sbjct: 151119 caaaactggtggaagccatccaggga 151144
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>dbj|D89872.1| Hepatitis C virus RNA for polyprotein, complete cds
          Length = 9033

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 37   gacgatgtcgtcgccggcctcc 58
            ||||||||||||||||||||||
Sbjct: 7251 gacgatgtcgtcgccggcctcc 7230
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>dbj|AP003971.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-850O8, complete
             sequence
          Length = 147440

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 53    gcctccacccatctcctcctcc 74
             ||||||||||||||||||||||
Sbjct: 50574 gcctccacccatctcctcctcc 50553
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>tpg|BK000394.1| TPA_inf: Human herpesvirus 5 strain AD169, complete genome
          Length = 230287

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 67     cctcctccgctccgcgtccgc 87
              |||||||||||||||||||||
Sbjct: 193772 cctcctccgctccgcgtccgc 193792
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 34      gatgacgatgtcgtcgccggc 54
               |||||||||||||||||||||
Sbjct: 1312852 gatgacgatgtcgtcgccggc 1312872
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 180    gcgcggccaccgcggaggcggccgaggcc 208
              |||||||| ||| ||||||||||||||||
Sbjct: 350607 gcgcggccgccgaggaggcggccgaggcc 350635
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 95      ctactccctcgccgcgcctcc 115
               |||||||||||||||||||||
Sbjct: 8423077 ctactccctcgccgcgcctcc 8423097
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>emb|BX470172.19| Zebrafish DNA sequence from clone DKEY-3H3 in linkage group 5, complete
              sequence
          Length = 243270

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 596    ttcttcagatatttctcttta 616
              |||||||||||||||||||||
Sbjct: 239437 ttcttcagatatttctcttta 239457
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>emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complete genome
          Length = 229354

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 67     cctcctccgctccgcgtccgc 87
              |||||||||||||||||||||
Sbjct: 192841 cctcctccgctccgcgtccgc 192861
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>emb|X04650.1|HEHCMVU Human cytomegalovirus (HCMV) short unique region, short repeats, and
            part of long repeat
          Length = 43275

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 67   cctcctccgctccgcgtccgc 87
            |||||||||||||||||||||
Sbjct: 7347 cctcctccgctccgcgtccgc 7367
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 180    gcgcggccaccgcggaggcggccgaggcc 208
              |||||||| ||| ||||||||||||||||
Sbjct: 962126 gcgcggccgccgaggaggcggccgaggcc 962154
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>emb|BX470118.9| Zebrafish DNA sequence from clone DKEY-207E22 in linkage group 5,
             complete sequence
          Length = 223990

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 596   ttcttcagatatttctcttta 616
             |||||||||||||||||||||
Sbjct: 50785 ttcttcagatatttctcttta 50805
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>emb|AL928775.2|CNS08CC5 Oryza sativa chromosome 12, . BAC OSJNBa0030N06 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 146444

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 95    ctactccctcgccgcgcctcc 115
             |||||||||||||||||||||
Sbjct: 29740 ctactccctcgccgcgcctcc 29760
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>emb|AL935116.6| Mouse DNA sequence from clone RP23-59I2 on chromosome 2, complete
           sequence
          Length = 35203

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 595 tttcttcagatatttctcttt 615
           |||||||||||||||||||||
Sbjct: 711 tttcttcagatatttctcttt 731
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>emb|AL845543.5| Mouse DNA sequence from clone RP23-257O6 on chromosome 2, complete
              sequence
          Length = 108221

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 595    tttcttcagatatttctcttt 615
              |||||||||||||||||||||
Sbjct: 106932 tttcttcagatatttctcttt 106952
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>emb|AL691424.7| Mouse DNA sequence from clone RP23-219K12 on chromosome X, complete
             sequence
          Length = 194520

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 580   tgttggggttcaatatttctt 600
             |||||||||||||||||||||
Sbjct: 22246 tgttggggttcaatatttctt 22266
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>ref|XM_521591.2| PREDICTED: Pan troglodytes paired-like homeodomain transcription
           factor 3 (PITX3), mRNA
          Length = 1388

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 ggcggagggcaccatggagg 266
           ||||||||||||||||||||
Sbjct: 760 ggcggagggcaccatggagg 741
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>gb|DQ895132.1| Homo sapiens clone FLH181657.01L; RZPDo839F10135D PITX3 mRNA,
           partial sequence
          Length = 909

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 ggcggagggcaccatggagg 266
           ||||||||||||||||||||
Sbjct: 606 ggcggagggcaccatggagg 587
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>gb|DQ895131.1| Homo sapiens clone FLH181652.01L; RZPDo839F09135D PITX3 mRNA,
           partial sequence
          Length = 909

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 ggcggagggcaccatggagg 266
           ||||||||||||||||||||
Sbjct: 606 ggcggagggcaccatggagg 587
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>gb|DQ891945.1| Synthetic construct Homo sapiens clone FLH181661.01X;
           RZPDo839F10136D PITX3 mRNA, complete sequence
          Length = 909

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 ggcggagggcaccatggagg 266
           ||||||||||||||||||||
Sbjct: 606 ggcggagggcaccatggagg 587
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>emb|CR932982.5| Zebrafish DNA sequence from clone ZFOS-889F12 in linkage group 20,
            complete sequence
          Length = 9057

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 590  caatatttcttcagatattt 609
            ||||||||||||||||||||
Sbjct: 1427 caatatttcttcagatattt 1408
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>gb|DQ397847.1| Cenarchaeum symbiosum clone C07F03, complete sequence
          Length = 42905

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   tggaggtgctcgtcgaagaa 343
             ||||||||||||||||||||
Sbjct: 33979 tggaggtgctcgtcgaagaa 33998
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>gb|AC120020.9| Mus musculus chromosome 16, clone RP24-251L14, complete sequence
          Length = 153700

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 513    caggagaaggagcagacgtc 532
              ||||||||||||||||||||
Sbjct: 122615 caggagaaggagcagacgtc 122634
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>gb|AC146938.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0062O09 map near S6115, complete sequence
          Length = 148654

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   atccagggagttggtttcaa 438
             ||||||||||||||||||||
Sbjct: 84183 atccagggagttggtttcaa 84202
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>gb|AC160987.4| Mus musculus BAC clone RP23-248O24 from chromosome 16, complete
             sequence
          Length = 202729

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 513   caggagaaggagcagacgtc 532
             ||||||||||||||||||||
Sbjct: 13899 caggagaaggagcagacgtc 13918
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>gb|AC102469.7| Mus musculus chromosome 1, clone RP24-356O3, complete sequence
          Length = 173767

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 54   cctccacccatctcctcctc 73
            ||||||||||||||||||||
Sbjct: 9410 cctccacccatctcctcctc 9429
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>ref|NM_133452.1| Homo sapiens ribonucleoprotein, PTB-binding 1 (RAVER1), mRNA
 gb|BC037428.1| Homo sapiens ribonucleoprotein, PTB-binding 1, mRNA (cDNA clone
            MGC:46327 IMAGE:5532899), complete cds
          Length = 3140

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 54   cctccacccatctcctcctccgct 77
            ||||| ||||||||||||||||||
Sbjct: 2126 cctccccccatctcctcctccgct 2149
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>gb|AC091001.3| Papio anubis clone RP41-36M16, complete sequence
          Length = 177066

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 104   cgccgcgcctccctgcagctcccc 127
             ||||||||||||| ||||||||||
Sbjct: 43103 cgccgcgcctcccagcagctcccc 43126
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 38      acgatgtcgtcgccggcctc 57
               ||||||||||||||||||||
Sbjct: 3092185 acgatgtcgtcgccggcctc 3092204
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>gb|BC037565.1| Homo sapiens ribonucleoprotein, PTB-binding 1, mRNA (cDNA clone
            IMAGE:5113697), partial cds
          Length = 2943

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 54   cctccacccatctcctcctccgct 77
            ||||| ||||||||||||||||||
Sbjct: 1950 cctccccccatctcctcctccgct 1973
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>gb|AC023503.23| Homo sapiens 3 BAC RP11-217I10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160370

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 587   gttcaatatttcttcagatatttc 610
             ||||| ||||||||||||||||||
Sbjct: 86719 gttcattatttcttcagatatttc 86742
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>gb|AC011511.12| Homo sapiens chromosome 19 clone CTD-2369P2, complete sequence
          Length = 156503

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 54     cctccacccatctcctcctccgct 77
              ||||| ||||||||||||||||||
Sbjct: 131835 cctccccccatctcctcctccgct 131812
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 419      atccagggagttggtttcaa 438
                ||||||||||||||||||||
Sbjct: 12555652 atccagggagttggtttcaa 12555633
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 419      atccagggagttggtttcaa 438
                ||||||||||||||||||||
Sbjct: 17523740 atccagggagttggtttcaa 17523721



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 419      atccagggagttggtttcaa 438
                ||||||||||||||||||||
Sbjct: 17537435 atccagggagttggtttcaa 17537416
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 190      cgcggaggcggccgaggccc 209
                ||||||||||||||||||||
Sbjct: 12328288 cgcggaggcggccgaggccc 12328307
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>emb|AL160011.35| Human DNA sequence from clone RP11-242B12 on chromosome 10 Contains the
             ELOVL3 gene for elongation of very long chain fatty acids
             (FEN1/Elo2, SUR4/Elo3, yeast)-like 3, the PITX3 gene for
             paired-like homeodomain transcription factor 3, the  5'
             end of the GBF1 gene for golgi-specific brefeldin A
             resistance factor 1 and three CpG islands, complete
             sequence
          Length = 47159

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   ggcggagggcaccatggagg 266
             ||||||||||||||||||||
Sbjct: 16140 ggcggagggcaccatggagg 16159
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 173    gtggtccgcgcggccaccgcggag 196
              |||||||||||||||||| |||||
Sbjct: 292698 gtggtccgcgcggccaccccggag 292675
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>emb|AL662995.2|OSJN00202 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032D24,
            complete sequence
          Length = 132465

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 190  cgcggaggcggccgaggccc 209
            ||||||||||||||||||||
Sbjct: 2314 cgcggaggcggccgaggccc 2333
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>emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019J05,
              complete sequence
          Length = 185211

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    cgcggaggcggccgaggccc 209
              ||||||||||||||||||||
Sbjct: 153172 cgcggaggcggccgaggccc 153191
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>emb|AL662810.16| Mouse DNA sequence from clone RP23-42P24 on chromosome 11 Contains a
              novel gene (9630006B20Rik), a novel gene, a ribosomal
              protein S12 (Rps12) pseudogene, a novel gene (LOC268391),
              the Bcl11a gene for B-cell CLL/lymphoma 11A (zinc finger
              protein), two novel genes and three CpG islands, complete
              sequence
          Length = 267641

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    tggaggagagggccattccc 280
              ||||||||||||||||||||
Sbjct: 267311 tggaggagagggccattccc 267292
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>emb|AL672018.6| Mouse DNA sequence from clone RP23-365O24 on chromosome 11 Contains
            part of a novel gene, the Bcl11a gene for B-cell
            CLL/lymphoma 11A (zinc finger protein), a novel gene and
            a CpG island, complete sequence
          Length = 84877

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  tggaggagagggccattccc 280
            ||||||||||||||||||||
Sbjct: 1670 tggaggagagggccattccc 1651
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>emb|AL845420.7| Zebrafish DNA sequence from clone CH211-203K16 in linkage group 20,
            complete sequence
          Length = 145933

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 590  caatatttcttcagatattt 609
            ||||||||||||||||||||
Sbjct: 6038 caatatttcttcagatattt 6057
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>gb|AC020763.6| Homo sapiens chromosome 16 clone RP11-394B2, complete sequence
          Length = 200838

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    ctccacccatctcctcctcc 74
             ||||||||||||||||||||
Sbjct: 36612 ctccacccatctcctcctcc 36631
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 34      gatgacgatgtcgtcgccggcctc 57
               |||||||||||||||||| |||||
Sbjct: 3839253 gatgacgatgtcgtcgcccgcctc 3839276
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>emb|CR590285.1| full-length cDNA clone CS0DL007YM08 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1582

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 54  cctccacccatctcctcctccgct 77
           ||||| ||||||||||||||||||
Sbjct: 639 cctccccccatctcctcctccgct 662
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>dbj|AP005479.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0045A07
          Length = 174165

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   atccagggagttggtttcaa 438
             ||||||||||||||||||||
Sbjct: 51689 atccagggagttggtttcaa 51670



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   atccagggagttggtttcaa 438
             ||||||||||||||||||||
Sbjct: 65384 atccagggagttggtttcaa 65365
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>ref|NM_174610.2| Bos taurus solute carrier family 6 (neurotransmitter transporter,
            taurine), member 6 (SLC6A6), mRNA
 gb|AF260239.1|AF260239 Bos taurus taurine transporter mRNA, complete cds
          Length = 2003

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 256  caccatggaggagagggcca 275
            ||||||||||||||||||||
Sbjct: 1805 caccatggaggagagggcca 1786
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>ref|NM_005029.3| Homo sapiens paired-like homeodomain transcription factor 3
           (PITX3), mRNA
          Length = 1407

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 ggcggagggcaccatggagg 266
           ||||||||||||||||||||
Sbjct: 760 ggcggagggcaccatggagg 741
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>gb|BC011642.2| Homo sapiens paired-like homeodomain transcription factor 3, mRNA
           (cDNA clone MGC:12766 IMAGE:4131442), complete cds
          Length = 1406

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 ggcggagggcaccatggagg 266
           ||||||||||||||||||||
Sbjct: 759 ggcggagggcaccatggagg 740
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 186     ccaccgcggaggcggccgag 205
               ||||||||||||||||||||
Sbjct: 2392812 ccaccgcggaggcggccgag 2392831
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 38      acgatgtcgtcgccggcctc 57
               ||||||||||||||||||||
Sbjct: 3099409 acgatgtcgtcgccggcctc 3099428
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>emb|CT485613.9| Mouse DNA sequence from clone RP23-140I12 on chromosome 17, complete
             sequence
          Length = 161949

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 511   cacaggagaaggagcagacg 530
             ||||||||||||||||||||
Sbjct: 94185 cacaggagaaggagcagacg 94204
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>gb|AF041339.1|AF041339 Homo sapiens homeodomain protein (PITX3) mRNA, complete cds
          Length = 1187

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 ggcggagggcaccatggagg 266
           ||||||||||||||||||||
Sbjct: 609 ggcggagggcaccatggagg 590
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>gb|AC140338.3| Mus musculus BAC clone RP23-240M3 from 10, complete sequence
          Length = 232876

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 595    tttcttcagatatttctctt 614
              ||||||||||||||||||||
Sbjct: 167122 tttcttcagatatttctctt 167103
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>emb|AM049177.1| Pedomicrobium sp. ACM 3067 manganese oxidation operon
          Length = 4350

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 127  ccgcgtcgccaccggagccg 146
            ||||||||||||||||||||
Sbjct: 3368 ccgcgtcgccaccggagccg 3387
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>gb|AC087782.34| Mus musculus strain C57BL/6J chromosome 16 clone rp23-81d13, complete
             sequence
          Length = 177250

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   tggaggagagggccattccc 280
             ||||||||||||||||||||
Sbjct: 71963 tggaggagagggccattccc 71982
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>emb|AL672285.8| Mouse DNA sequence from clone RP23-45G5 on chromosome X, complete
            sequence
          Length = 164443

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 216  acaccaccgagtccctcatc 235
            ||||||||||||||||||||
Sbjct: 3547 acaccaccgagtccctcatc 3566
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>dbj|AB075858.1| Homo sapiens mRNA for KIAA1978 protein
          Length = 4694

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 54   cctccacccatctcctcctccgct 77
            ||||| ||||||||||||||||||
Sbjct: 3716 cctccccccatctcctcctccgct 3739
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>emb|AL671732.15| Mouse DNA sequence from clone RP23-309O6 on chromosome X, complete
              sequence
          Length = 128748

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 590    caatatttcttcagatattt 609
              ||||||||||||||||||||
Sbjct: 110458 caatatttcttcagatattt 110439


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 97,483,678
Number of extensions: 6258309
Number of successful extensions: 151132
Number of sequences better than 10.0: 71
Number of HSP's gapped: 151131
Number of HSP's successfully gapped: 77
Length of query: 639
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 617
Effective length of database: 18,508,616,841
Effective search space: 11419816590897
Effective search space used: 11419816590897
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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