ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf35f16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001050536.1| Oryza sativa (japonica cultivar-group) Os01g0703600 (Os01g0703600) mRNA, complete cds Length = 1889 Score = 1560 bits (787), Expect = 0.0 Identities = 1177/1307 (90%) Strand = Plus / Plus Query: 173 cgcgccgatggcgggcgcggtgtcggcgctgttcctgctggacatcaagggccgcgtcct 232 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 234 cgcgccgatggcgggcgcggtgtcggcgctgttccttctggacatcaagggccgcgtcct 293 Query: 233 cgtctggcgcgacttccgcggcgacgtcaccgccatccaggccgagcgcttcttcaccaa 292 |||||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||| Sbjct: 294 cgtctggcgcgactaccgcggcgacgtctccgccctccaggctgagcgcttcttcaccaa 353 Query: 293 gctcctcgacaaggagggcgatgcggaggcgtactcgccggtggtctacgacgacgcggg 352 ||||||||||||||||||||| |||||||| |||||||||||||||||||||| || || Sbjct: 354 gctcctcgacaaggagggcgactcggaggcgcactcgccggtggtctacgacgatgccgg 413 Query: 353 cgttacctacatgtttatacagcataacaatgtcttcctcctcaccgcctcccgccaaaa 412 || ||||||||||| || ||||| ||||| || ||||| || |||||||||||||| || Sbjct: 414 ggtcacctacatgttcatccagcacaacaacgtgttcctactaaccgcctcccgccagaa 473 Query: 413 ctgcaacgccgctagcatcctcctcttcctccaccgcgttgtcgatgtgttcaagcacta 472 |||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 474 ctgcaacgccgccagcatcctcctcttcctccaccgcgtcgttgatgtgttcaagcacta 533 Query: 473 tttcgaggaattggaggaggaatcactgagagataactttgtcgtcgtgtatgagttgct 532 |||||| || |||||||| || || ||||| |||||||||||||| |||||||||||||| Sbjct: 534 tttcgaagagttggaggaagagtcgctgagggataactttgtcgttgtgtatgagttgct 593 Query: 533 cgatgagatgatggattttgggtacccacaatacaccgaggcaaagatattaagcgagtt 592 ||||| ||||||||||||||||||||||||||||| ||||| || || ||||| || || Sbjct: 594 tgatgaaatgatggattttgggtacccacaatacacggaggcgaaaatcttaagtgaatt 653 Query: 593 catcaagacagacgcatataagatggaggtcacacagagaccaccaatggctgtgacaaa 652 ||| ||||| || || || | ||||||||| ||||||| ||||| ||||| |||||||| Sbjct: 654 cattaagacggatgcgtacaggatggaggtatcacagaggccacctatggcagtgacaaa 713 Query: 653 tgctgtctcatggaggagtgaggggattcggtacaaaaagaatgaagtgttcttggatgt 712 ||| || |||||| |||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 714 tgccgtgtcatggcggagtgagggtattcggtacaagaagaatgaagtgttcttggatgt 773 Query: 713 agtggagagtgttaacattcttgttaatagcaatgggcagattgtgagatcagacgttgt 772 |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 774 tgtggagagtgttaacattcttgttaacagcaatgggcagattgtgagatcagatgttgt 833 Query: 773 tggggcactgaaaatgcgaacatatttgagtgggatgcccgagtgcaaacttgggttgaa 832 |||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 834 tggggcactgaagatgcggacatatttgagtggaatgcctgagtgcaaacttggattgaa 893 Query: 833 tgacaaggttcttttagaggctcaggggcgagcaacaaaagggaaggcaatagatcttga 892 || | ||||||||| |||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 894 cgatagggttcttttggaggctcaaggccgagctactaaaggaaaagcaatagatcttga 953 Query: 893 tgatatcaaatttcatcagtgcgtgcgattggccagatttgagaatgacaggacgatatc 952 |||||| |||||||| ||||||||| | ||||| |||||||||||||| || || ||||| Sbjct: 954 tgatattaaatttcaccagtgcgtgaggttggctagatttgagaatgatagaactatatc 1013 Query: 953 attcatccctccagatggatcttttgatctgatgacatacaggctcaacactcaggtgaa 1012 ||||| ||||| || |||||||| ||||| ||||||||||| || | ||| ||||| || Sbjct: 1014 cttcatacctcctgacggatctttcgatctaatgacatacagacttagcacccaggtaaa 1073 Query: 1013 gcctcttatctgggtggaagcccaggttgaaaaacattcaagaagccggatagaattcat 1072 || ||||||||||||||||| || |||| ||||||||||||||||| |||||| | || Sbjct: 1074 accacttatctgggtggaagcacaaattgagaaacattcaagaagccgaatagaacttat 1133 Query: 1073 gattaaggcaagaagtcagtttaaggaaagaagcacagcaacaaatgttgaaattgaggt 1132 | | || ||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1134 ggtgaaagcaagaagtcagtttaaggaaaggagcacagcaacaaatgttgaaattgaagt 1193 Query: 1133 tcctgttccttcagatgccacgaacccaaatataagaacttcaatgggttctgctgcata 1192 ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1194 gcctgttccttcagatgctacgaaccctaatataagaacttcaatgggctctgctgcata 1253 Query: 1193 tgcacctgagcgagatgcgatggtctggaaaataaaatcatttcctggtggcaaagagta 1252 |||||||||| ||||||| |||||||||||| |||||||||||||||||||||| || || Sbjct: 1254 tgcacctgagagagatgcaatggtctggaaagtaaaatcatttcctggtggcaaggatta 1313 Query: 1253 catgtgcagagcggagtttagtctaccaagtataactgcggaagaagcagttcctgaaaa 1312 |||||||||||| || |||||||| |||||||||||||| |||||||||| ||||||||| Sbjct: 1314 catgtgcagagctgaatttagtcttccaagtataactgcagaagaagcagctcctgaaaa 1373 Query: 1313 gaaggcaccgatacgagtgaaatttgagataccgtatttcactgtatctggtattcaggt 1372 ||||||||| ||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 1374 gaaggcaccaatacgagtgaaatttgagataccatatttcactgtgtcgggtattcaggt 1433 Query: 1373 tcgctatctaaagatcattgaaaagagtgggtaccaggcgctcccgtgggttagatacat 1432 ||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 1434 tcgctatctgaagatcattgaaaagagtgggtaccaggcgcttccttgggttagatacat 1493 Query: 1433 caccatggcaggtgaatacgaactgagacttatatgagttttctctg 1479 || ||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 1494 tacaatggctggtgaatacgaactgagacttatatgagttatctctg 1540 Score = 48.1 bits (24), Expect = 0.11 Identities = 46/52 (88%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 1642 tagtgtta-tttaccatggtcactgtaatttacacatcaagtacagttttga 1692 |||||||| ||||||||||| ||||||| |||| ||||||||| || ||||| Sbjct: 1696 tagtgttactttaccatggttactgtaagttacccatcaagtatagctttga 1747
>dbj|AK065538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030K02, full insert sequence Length = 1892 Score = 1552 bits (783), Expect = 0.0 Identities = 1176/1307 (89%) Strand = Plus / Plus Query: 173 cgcgccgatggcgggcgcggtgtcggcgctgttcctgctggacatcaagggccgcgtcct 232 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 237 cgcgccgatggcgggcgcggtgtcggcgctgttccttctggacatcaagggccgcgtcct 296 Query: 233 cgtctggcgcgacttccgcggcgacgtcaccgccatccaggccgagcgcttcttcaccaa 292 |||||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||| Sbjct: 297 cgtctggcgcgactaccgcggcgacgtctccgccctccaggctgagcgcttcttcaccaa 356 Query: 293 gctcctcgacaaggagggcgatgcggaggcgtactcgccggtggtctacgacgacgcggg 352 ||||||||||||||||||||| |||||||| |||||||||||||||||||||| || || Sbjct: 357 gctcctcgacaaggagggcgactcggaggcgcactcgccggtggtctacgacgatgccgg 416 Query: 353 cgttacctacatgtttatacagcataacaatgtcttcctcctcaccgcctcccgccaaaa 412 || ||||||||||| || ||||| ||||| || ||||| || |||||||||||||| || Sbjct: 417 ggtcacctacatgttcatccagcacaacaacgtgttcctactaaccgcctcccgccagaa 476 Query: 413 ctgcaacgccgctagcatcctcctcttcctccaccgcgttgtcgatgtgttcaagcacta 472 |||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 477 ctgcaacgccgccagcatcctcctcttcctccaccgcgtcgttgatgtgttcaagcacta 536 Query: 473 tttcgaggaattggaggaggaatcactgagagataactttgtcgtcgtgtatgagttgct 532 |||||| || |||||||| || || ||||| |||||||||||||| |||||||||||||| Sbjct: 537 tttcgaagagttggaggaagagtcgctgagggataactttgtcgttgtgtatgagttgct 596 Query: 533 cgatgagatgatggattttgggtacccacaatacaccgaggcaaagatattaagcgagtt 592 ||||| ||||||||||||||||||||||||||||| ||||| || || ||||| || || Sbjct: 597 tgatgaaatgatggattttgggtacccacaatacacggaggcgaaaatcttaagtgaatt 656 Query: 593 catcaagacagacgcatataagatggaggtcacacagagaccaccaatggctgtgacaaa 652 ||| ||||| || || || | ||||||||| ||||||| ||||| ||||| |||||||| Sbjct: 657 cattaagacggatgcgtacaggatggaggtatcacagaggccacctatggcagtgacaaa 716 Query: 653 tgctgtctcatggaggagtgaggggattcggtacaaaaagaatgaagtgttcttggatgt 712 ||| || |||||| |||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 717 tgccgtgtcatggcggagtgagggtattcggtacaagaagaatgaagtgttcttggatgt 776 Query: 713 agtggagagtgttaacattcttgttaatagcaatgggcagattgtgagatcagacgttgt 772 |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 777 tgtggagagtgttaacattcttgttaacagcaatgggcagattgtgagatcagatgttgt 836 Query: 773 tggggcactgaaaatgcgaacatatttgagtgggatgcccgagtgcaaacttgggttgaa 832 |||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 837 tggggcactgaagatgcggacatatttgagtggaatgcctgagtgcaaacttggattgaa 896 Query: 833 tgacaaggttcttttagaggctcaggggcgagcaacaaaagggaaggcaatagatcttga 892 || | ||||||||| |||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 897 cgatagggttcttttggaggctcaaggccgagctactaaaggaaaagcaatagatcttga 956 Query: 893 tgatatcaaatttcatcagtgcgtgcgattggccagatttgagaatgacaggacgatatc 952 |||||| |||||||| ||||||||| | ||||| |||||||||||||| || || ||||| Sbjct: 957 tgatattaaatttcaccagtgcgtgaggttggctagatttgagaatgatagaactatatc 1016 Query: 953 attcatccctccagatggatcttttgatctgatgacatacaggctcaacactcaggtgaa 1012 ||||| ||||| || |||||||| ||||| ||||||||||| || | ||| ||||| | Sbjct: 1017 cttcatacctcctgacggatctttcgatctaatgacatacagacttagcacccaggtata 1076 Query: 1013 gcctcttatctgggtggaagcccaggttgaaaaacattcaagaagccggatagaattcat 1072 || ||||||||||||||||| || |||| ||||||||||||||||| |||||| | || Sbjct: 1077 accacttatctgggtggaagcacaaattgagaaacattcaagaagccgaatagaacttat 1136 Query: 1073 gattaaggcaagaagtcagtttaaggaaagaagcacagcaacaaatgttgaaattgaggt 1132 | | || ||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1137 ggtgaaagcaagaagtcagtttaaggaaaggagcacagcaacaaatgttgaaattgaagt 1196 Query: 1133 tcctgttccttcagatgccacgaacccaaatataagaacttcaatgggttctgctgcata 1192 ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1197 gcctgttccttcagatgctacgaaccctaatataagaacttcaatgggctctgctgcata 1256 Query: 1193 tgcacctgagcgagatgcgatggtctggaaaataaaatcatttcctggtggcaaagagta 1252 |||||||||| ||||||| |||||||||||| |||||||||||||||||||||| || || Sbjct: 1257 tgcacctgagagagatgcaatggtctggaaagtaaaatcatttcctggtggcaaggatta 1316 Query: 1253 catgtgcagagcggagtttagtctaccaagtataactgcggaagaagcagttcctgaaaa 1312 |||||||||||| || |||||||| |||||||||||||| |||||||||| ||||||||| Sbjct: 1317 catgtgcagagctgaatttagtcttccaagtataactgcagaagaagcagctcctgaaaa 1376 Query: 1313 gaaggcaccgatacgagtgaaatttgagataccgtatttcactgtatctggtattcaggt 1372 ||||||||| ||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 1377 gaaggcaccaatacgagtgaaatttgagataccatatttcactgtgtcgggtattcaggt 1436 Query: 1373 tcgctatctaaagatcattgaaaagagtgggtaccaggcgctcccgtgggttagatacat 1432 ||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 1437 tcgctatctgaagatcattgaaaagagtgggtaccaggcgcttccttgggttagatacat 1496 Query: 1433 caccatggcaggtgaatacgaactgagacttatatgagttttctctg 1479 || ||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 1497 tacaatggctggtgaatacgaactgagacttatatgagttatctctg 1543 Score = 48.1 bits (24), Expect = 0.11 Identities = 46/52 (88%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 1642 tagtgtta-tttaccatggtcactgtaatttacacatcaagtacagttttga 1692 |||||||| ||||||||||| ||||||| |||| ||||||||| || ||||| Sbjct: 1699 tagtgttactttaccatggttactgtaagttacccatcaagtatagctttga 1750
>dbj|AK060762.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A04, full insert sequence Length = 1867 Score = 1233 bits (622), Expect = 0.0 Identities = 961/1074 (89%) Strand = Plus / Plus Query: 173 cgcgccgatggcgggcgcggtgtcggcgctgttcctgctggacatcaagggccgcgtcct 232 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 227 cgcgccgatggcgggcgcggtgtcggcgctgttccttctggacatcaagggccgcgtcct 286 Query: 233 cgtctggcgcgacttccgcggcgacgtcaccgccatccaggccgagcgcttcttcaccaa 292 |||||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||| Sbjct: 287 cgtctggcgcgactaccgcggcgacgtctccgccctccaggctgagcgcttcttcaccaa 346 Query: 293 gctcctcgacaaggagggcgatgcggaggcgtactcgccggtggtctacgacgacgcggg 352 ||||||||||||||||||||| |||||||| |||||||||||||||||||||| || || Sbjct: 347 gctcctcgacaaggagggcgactcggaggcgcactcgccggtggtctacgacgatgccgg 406 Query: 353 cgttacctacatgtttatacagcataacaatgtcttcctcctcaccgcctcccgccaaaa 412 || ||||||||||| || ||||| ||||| || ||||| || |||||||||||||| || Sbjct: 407 ggtcacctacatgttcatccagcacaacaacgtgttcctactaaccgcctcccgccagaa 466 Query: 413 ctgcaacgccgctagcatcctcctcttcctccaccgcgttgtcgatgtgttcaagcacta 472 |||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 467 ctgcaacgccgccagcatcctcctcttcctccaccgcgtcgttgatgtgttcaagcacta 526 Query: 473 tttcgaggaattggaggaggaatcactgagagataactttgtcgtcgtgtatgagttgct 532 |||||| || |||||||| || || ||||| |||||||||||||| |||||||||||||| Sbjct: 527 tttcgaagagttggaggaagagtcgctgagggataactttgtcgttgtgtatgagttgct 586 Query: 533 cgatgagatgatggattttgggtacccacaatacaccgaggcaaagatattaagcgagtt 592 ||||| ||||||||||||||||||||||||||||| ||||| || || ||||| || || Sbjct: 587 tgatgaaatgatggattttgggtacccacaatacacggaggcgaaaatcttaagtgaatt 646 Query: 593 catcaagacagacgcatataagatggaggtcacacagagaccaccaatggctgtgacaaa 652 ||| ||||| || || || | ||||||||| ||||||| ||||| ||||| |||||||| Sbjct: 647 cattaagacggatgcgtacaggatggaggtatcacagaggccacctatggcagtgacaaa 706 Query: 653 tgctgtctcatggaggagtgaggggattcggtacaaaaagaatgaagtgttcttggatgt 712 ||| || |||||| |||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 707 tgccgtgtcatggcggagtgagggtattcggtacaagaagaatgaagtgttcttggatgt 766 Query: 713 agtggagagtgttaacattcttgttaatagcaatgggcagattgtgagatcagacgttgt 772 |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 767 tgtggagagtgttaacattcttgttaacagcaatgggcagattgtgagatcagatgttgt 826 Query: 773 tggggcactgaaaatgcgaacatatttgagtgggatgcccgagtgcaaacttgggttgaa 832 |||||||||||| ||||| |||||||||||||| ||||| | |||||||||||| ||||| Sbjct: 827 tggggcactgaagatgcggacatatttgagtggaatgcctgggtgcaaacttggattgaa 886 Query: 833 tgacaaggttcttttagaggctcaggggcgagcaacaaaagggaaggcaatagatcttga 892 || | ||||||||| |||||||| || ||||| || ||||| || |||||||||||||| Sbjct: 887 cgatagggttcttttggaggctcaaggccgagctactaaaggaaaagcaatagatcttga 946 Query: 893 tgatatcaaatttcatcagtgcgtgcgattggccagatttgagaatgacaggacgatatc 952 |||||| |||||||| ||||||||| | ||||| |||||||||||||| || || ||||| Sbjct: 947 tgatattaaatttcaccagtgcgtgaggttggctagatttgagaatgatagaactatatc 1006 Query: 953 attcatccctccagatggatcttttgatctgatgacatacaggctcaacactcaggtgaa 1012 ||||| ||||| || |||||||| ||||| ||||||||||| || | ||| ||||| || Sbjct: 1007 cttcatacctcctgacggatctttcgatctaatgacatacagacttagcacccaggtaaa 1066 Query: 1013 gcctcttatctgggtggaagcccaggttgaaaaacattcaagaagccggatagaattcat 1072 || ||||||||||||||||| || |||| ||||||||||||||||| |||||| | || Sbjct: 1067 accacttatctgggtggaagcacaaattgagaaacattcaagaagccgaatagaacttat 1126 Query: 1073 gattaaggcaagaagtcagtttaaggaaagaagcacagcaacaaatgttgaaattgaggt 1132 | | || ||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1127 ggtgaaagcaagaagtcagtttaaggaaaggagcacagcaacaaatgttgaaattgaagt 1186 Query: 1133 tcctgttccttcagatgccacgaacccaaatataagaacttcaatgggttctgctgcata 1192 ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1187 gcctgttccttcagatgctacgaaccctaatataagaacttcaatgggctctgctgcata 1246 Query: 1193 tgcacctgagcgagatgcgatggtctggaaaataaaatcatttcctggtggcaa 1246 |||||||||| ||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 1247 tgcacctgagagagatgcaatggtctggaaagtaaaatcatttcctggtggcaa 1300 Score = 309 bits (156), Expect = 2e-80 Identities = 204/220 (92%) Strand = Plus / Plus Query: 1260 agagcggagtttagtctaccaagtataactgcggaagaagcagttcctgaaaagaaggca 1319 ||||| || |||||||| |||||||||||||| |||||||||| |||||||||||||||| Sbjct: 1300 agagctgaatttagtcttccaagtataactgcagaagaagcagctcctgaaaagaaggca 1359 Query: 1320 ccgatacgagtgaaatttgagataccgtatttcactgtatctggtattcaggttcgctat 1379 || ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| Sbjct: 1360 ccaatacgagtgaaatttgagataccatatttcactgtgtcgggtattcaggttcgctat 1419 Query: 1380 ctaaagatcattgaaaagagtgggtaccaggcgctcccgtgggttagatacatcaccatg 1439 || |||||||||||||||||||||||||||||||| || |||||||||||||| || ||| Sbjct: 1420 ctgaagatcattgaaaagagtgggtaccaggcgcttccttgggttagatacattacaatg 1479 Query: 1440 gcaggtgaatacgaactgagacttatatgagttttctctg 1479 || |||||||||||||||||||||||||||||| |||||| Sbjct: 1480 gctggtgaatacgaactgagacttatatgagttatctctg 1519 Score = 48.1 bits (24), Expect = 0.11 Identities = 46/52 (88%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 1642 tagtgtta-tttaccatggtcactgtaatttacacatcaagtacagttttga 1692 |||||||| ||||||||||| ||||||| |||| ||||||||| || ||||| Sbjct: 1675 tagtgttactttaccatggttactgtaagttacccatcaagtatagctttga 1726
>ref|NM_001062736.1| Oryza sativa (japonica cultivar-group) Os05g0543100 (Os05g0543100) mRNA, complete cds Length = 1898 Score = 1144 bits (577), Expect = 0.0 Identities = 1096/1269 (86%) Strand = Plus / Plus Query: 182 ggcgggcgcggtgtcggcgctgttcctgctggacatcaagggccgcgtcctcgtctggcg 241 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 226 ggcgggggcggtgtcggcgctgttcctgctcgacatcaagggccgcgtcctcgtctggcg 285 Query: 242 cgacttccgcggcgacgtcaccgccatccaggccgagcgcttcttcaccaagctcctcga 301 ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 286 cgactaccgcggcgacgtctccgcgctccaggccgagcgcttcttcaccaagctcctcga 345 Query: 302 caaggagggcgatgcggaggcgtactcgccggtggtctacgacgacgcgggcgttaccta 361 ||||||| |||| ||||||| | ||| || || ||| |||| ||||| ||||| |||| Sbjct: 346 caaggagagcgacgcggaggtgctctcccccgtcgtccacgatgacgccggcgtctccta 405 Query: 362 catgtttatacagcataacaatgtcttcctcctcaccgcctcccgccaaaactgcaacgc 421 |||||| || ||||| |||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 406 catgttcatccagcacaacaatgtgttcctcctcaccgcgtcccgtcagaactgcaacgc 465 Query: 422 cgctagcatcctcctcttcctccaccgcgttgtcgatgtgttcaagcactatttcgagga 481 ||| ||||| |||||||||||||||||||| ||||||||||||||||| || |||||||| Sbjct: 466 cgccagcatactcctcttcctccaccgcgtcgtcgatgtgttcaagcattacttcgagga 525 Query: 482 attggaggaggaatcactgagagataactttgtcgtcgtgtatgagttgctcgatgagat 541 |||||||||||||| |||| || ||||| ||||| |||||||||||||| |||||||| Sbjct: 526 gctggaggaggaatcattgagggacaacttcgtcgttgtgtatgagttgcttgatgagat 585 Query: 542 gatggattttgggtacccacaatacaccgaggcaaagatattaagcgagttcatcaagac 601 ||||||||| ||||||||||||||||| || |||| ||| | ||||||||||| || || Sbjct: 586 gatggatttcgggtacccacaatacacggaagcaatgatcctgagcgagttcattaaaac 645 Query: 602 agacgcatataagatggaggtcacacagagaccaccaatggctgtgacaaatgctgtctc 661 ||||| || | |||||||||||| ||||| || || ||||| |||||||||||||| || Sbjct: 646 ggacgcgtacaggatggaggtcactcagaggccgcccatggcagtgacaaatgctgtgtc 705 Query: 662 atggaggagtgaggggattcggtacaaaaagaatgaagtgttcttggatgtagtggagag 721 ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 706 atggaggagcgaggggattcggtacaagaagaatgaagtgttcttggatgtggtggagag 765 Query: 722 tgttaacattcttgttaatagcaatgggcagattgtgagatcagacgttgttggggcact 781 ||| || || || ||||| |||||||||||||| ||||| || || || | || | || Sbjct: 766 tgtcaatatcctcgttaacagcaatgggcagatagtgaggtctgatgtcatcggtgagct 825 Query: 782 gaaaatgcgaacatatttgagtgggatgcccgagtgcaaacttgggttgaatgacaaggt 841 |||||||||||| | | | ||||| ||||||||||||||||| ||||||||||| | ||| Sbjct: 826 gaaaatgcgaacctttctaagtggaatgcccgagtgcaaactggggttgaatgatagggt 885 Query: 842 tcttttagaggctcaggggcgagcaacaaaagggaaggcaatagatcttgatgatatcaa 901 ||| || |||||||| || ||| |||| ||||| || ||||||||| | || |||||||| Sbjct: 886 tctcttggaggctcaaggccgaacaactaaaggaaaagcaatagatttggacgatatcaa 945 Query: 902 atttcatcagtgcgtgcgattggccagatttgagaatgacaggacgatatcattcatccc 961 ||| |||||||| || || |||||||||||||||||||||||||| ||||| ||||| || Sbjct: 946 attccatcagtgtgttcggttggccagatttgagaatgacaggactatatccttcattcc 1005 Query: 962 tccagatggatcttttgatctgatgacatacaggctcaacactcaggtgaagcctcttat 1021 |||||||||||| |||||||||||||| ||||| || | ||| |||||||| |||||||| Sbjct: 1006 tccagatggatcatttgatctgatgacttacagacttagcacccaggtgaaacctcttat 1065 Query: 1022 ctgggtggaagcccaggttgaaaaacattcaagaagccggatagaattcatgattaaggc 1081 |||||| ||||| || || || |||||||||||||| |||||| | ||| | ||| | Sbjct: 1066 ctgggtagaagcacaagtggagaaacattcaagaagtcggatacagatcacagtgaagac 1125 Query: 1082 aagaagtcagtttaaggaaagaagcacagcaacaaatgttgaaattgaggttcctgttcc 1141 |||||||||||| || ||||| ||||||||||||||||| |||||||| || || || || Sbjct: 1126 aagaagtcagttcaaagaaaggagcacagcaacaaatgtagaaattgaagtaccagtgcc 1185 Query: 1142 ttcagatgccacgaacccaaatataagaacttcaatgggttctgctgcatatgcacctga 1201 | ||| | || |||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 1186 tgaggattcgacaaacccaaatataagaacttcaatgggctctgcggcatatgcacctga 1245 Query: 1202 gcgagatgcgatggtctggaaaataaaatcatttcctggtggcaaagagtacatgtgcag 1261 | ||||||||||||||||||||||||||||||||||||||||||| || || ||||| || Sbjct: 1246 gagagatgcgatggtctggaaaataaaatcatttcctggtggcaaggaatatatgtgtag 1305 Query: 1262 agcggagtttagtctaccaagtataactgcggaagaagcagttcctgaaaagaaggcacc 1321 ||| || ||||| || ||||| ||||| | ||||| | | | |||||||||||||| || Sbjct: 1306 agcagaatttagccttccaagcataacatcagaagatggaatgcctgaaaagaaggctcc 1365 Query: 1322 gatacgagtgaaatttgagataccgtatttcactgtatctggtattcaggttcgctatct 1381 |||||| ||||||||||||||||||||||| || || || |||||||||||||||||||| Sbjct: 1366 gatacgtgtgaaatttgagataccgtattttaccgtgtcgggtattcaggttcgctatct 1425 Query: 1382 aaagatcattgaaaagagtgggtaccaggcgctcccgtgggttagatacatcaccatggc 1441 || ||||| ||||||||||| || ||||| || || |||||| |||||||||| ||||| Sbjct: 1426 gaaaatcatcgaaaagagtggatatcaggcccttccttgggttcgatacatcacaatggc 1485 Query: 1442 aggtgaata 1450 |||||||| Sbjct: 1486 tggtgaata 1494
>dbj|AK065138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A10, full insert sequence Length = 1899 Score = 1144 bits (577), Expect = 0.0 Identities = 1096/1269 (86%) Strand = Plus / Plus Query: 182 ggcgggcgcggtgtcggcgctgttcctgctggacatcaagggccgcgtcctcgtctggcg 241 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 227 ggcgggggcggtgtcggcgctgttcctgctcgacatcaagggccgcgtcctcgtctggcg 286 Query: 242 cgacttccgcggcgacgtcaccgccatccaggccgagcgcttcttcaccaagctcctcga 301 ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 287 cgactaccgcggcgacgtctccgcgctccaggccgagcgcttcttcaccaagctcctcga 346 Query: 302 caaggagggcgatgcggaggcgtactcgccggtggtctacgacgacgcgggcgttaccta 361 ||||||| |||| ||||||| | ||| || || ||| |||| ||||| ||||| |||| Sbjct: 347 caaggagagcgacgcggaggtgctctcccccgtcgtccacgatgacgccggcgtctccta 406 Query: 362 catgtttatacagcataacaatgtcttcctcctcaccgcctcccgccaaaactgcaacgc 421 |||||| || ||||| |||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 407 catgttcatccagcacaacaatgtgttcctcctcaccgcgtcccgtcagaactgcaacgc 466 Query: 422 cgctagcatcctcctcttcctccaccgcgttgtcgatgtgttcaagcactatttcgagga 481 ||| ||||| |||||||||||||||||||| ||||||||||||||||| || |||||||| Sbjct: 467 cgccagcatactcctcttcctccaccgcgtcgtcgatgtgttcaagcattacttcgagga 526 Query: 482 attggaggaggaatcactgagagataactttgtcgtcgtgtatgagttgctcgatgagat 541 |||||||||||||| |||| || ||||| ||||| |||||||||||||| |||||||| Sbjct: 527 gctggaggaggaatcattgagggacaacttcgtcgttgtgtatgagttgcttgatgagat 586 Query: 542 gatggattttgggtacccacaatacaccgaggcaaagatattaagcgagttcatcaagac 601 ||||||||| ||||||||||||||||| || |||| ||| | ||||||||||| || || Sbjct: 587 gatggatttcgggtacccacaatacacggaagcaatgatcctgagcgagttcattaaaac 646 Query: 602 agacgcatataagatggaggtcacacagagaccaccaatggctgtgacaaatgctgtctc 661 ||||| || | |||||||||||| ||||| || || ||||| |||||||||||||| || Sbjct: 647 ggacgcgtacaggatggaggtcactcagaggccgcccatggcagtgacaaatgctgtgtc 706 Query: 662 atggaggagtgaggggattcggtacaaaaagaatgaagtgttcttggatgtagtggagag 721 ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 707 atggaggagcgaggggattcggtacaagaagaatgaagtgttcttggatgtggtggagag 766 Query: 722 tgttaacattcttgttaatagcaatgggcagattgtgagatcagacgttgttggggcact 781 ||| || || || ||||| |||||||||||||| ||||| || || || | || | || Sbjct: 767 tgtcaatatcctcgttaacagcaatgggcagatagtgaggtctgatgtcatcggtgagct 826 Query: 782 gaaaatgcgaacatatttgagtgggatgcccgagtgcaaacttgggttgaatgacaaggt 841 |||||||||||| | | | ||||| ||||||||||||||||| ||||||||||| | ||| Sbjct: 827 gaaaatgcgaacctttctaagtggaatgcccgagtgcaaactggggttgaatgatagggt 886 Query: 842 tcttttagaggctcaggggcgagcaacaaaagggaaggcaatagatcttgatgatatcaa 901 ||| || |||||||| || ||| |||| ||||| || ||||||||| | || |||||||| Sbjct: 887 tctcttggaggctcaaggccgaacaactaaaggaaaagcaatagatttggacgatatcaa 946 Query: 902 atttcatcagtgcgtgcgattggccagatttgagaatgacaggacgatatcattcatccc 961 ||| |||||||| || || |||||||||||||||||||||||||| ||||| ||||| || Sbjct: 947 attccatcagtgtgttcggttggccagatttgagaatgacaggactatatccttcattcc 1006 Query: 962 tccagatggatcttttgatctgatgacatacaggctcaacactcaggtgaagcctcttat 1021 |||||||||||| |||||||||||||| ||||| || | ||| |||||||| |||||||| Sbjct: 1007 tccagatggatcatttgatctgatgacttacagacttagcacccaggtgaaacctcttat 1066 Query: 1022 ctgggtggaagcccaggttgaaaaacattcaagaagccggatagaattcatgattaaggc 1081 |||||| ||||| || || || |||||||||||||| |||||| | ||| | ||| | Sbjct: 1067 ctgggtagaagcacaagtggagaaacattcaagaagtcggatacagatcacagtgaagac 1126 Query: 1082 aagaagtcagtttaaggaaagaagcacagcaacaaatgttgaaattgaggttcctgttcc 1141 |||||||||||| || ||||| ||||||||||||||||| |||||||| || || || || Sbjct: 1127 aagaagtcagttcaaagaaaggagcacagcaacaaatgtagaaattgaagtaccagtgcc 1186 Query: 1142 ttcagatgccacgaacccaaatataagaacttcaatgggttctgctgcatatgcacctga 1201 | ||| | || |||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 1187 tgaggattcgacaaacccaaatataagaacttcaatgggctctgcggcatatgcacctga 1246 Query: 1202 gcgagatgcgatggtctggaaaataaaatcatttcctggtggcaaagagtacatgtgcag 1261 | ||||||||||||||||||||||||||||||||||||||||||| || || ||||| || Sbjct: 1247 gagagatgcgatggtctggaaaataaaatcatttcctggtggcaaggaatatatgtgtag 1306 Query: 1262 agcggagtttagtctaccaagtataactgcggaagaagcagttcctgaaaagaaggcacc 1321 ||| || ||||| || ||||| ||||| | ||||| | | | |||||||||||||| || Sbjct: 1307 agcagaatttagccttccaagcataacatcagaagatggaatgcctgaaaagaaggctcc 1366 Query: 1322 gatacgagtgaaatttgagataccgtatttcactgtatctggtattcaggttcgctatct 1381 |||||| ||||||||||||||||||||||| || || || |||||||||||||||||||| Sbjct: 1367 gatacgtgtgaaatttgagataccgtattttaccgtgtcgggtattcaggttcgctatct 1426 Query: 1382 aaagatcattgaaaagagtgggtaccaggcgctcccgtgggttagatacatcaccatggc 1441 || ||||| ||||||||||| || ||||| || || |||||| |||||||||| ||||| Sbjct: 1427 gaaaatcatcgaaaagagtggatatcaggcccttccttgggttcgatacatcacaatggc 1486 Query: 1442 aggtgaata 1450 |||||||| Sbjct: 1487 tggtgaata 1495
>gb|AY109738.1| Zea mays CL9467_1 mRNA sequence Length = 1356 Score = 997 bits (503), Expect = 0.0 Identities = 821/927 (88%) Strand = Plus / Minus Query: 552 gggtacccacaatacaccgaggcaaagatattaagcgagttcatcaagacagacgcatat 611 ||||||||||||||||| ||||| ||||| |||| ||||||||||||||||| || || Sbjct: 1355 gggtacccacaatacacggaggcgaagatcctaagtgagttcatcaagacagatgcgtac 1296 Query: 612 aagatggaggtcacacagagaccaccaatggctgtgacaaatgctgtctcatggaggagt 671 | |||||||||||||||| | ||||| ||||| |||||||||||||| ||||||||||| Sbjct: 1295 aggatggaggtcacacagcgtccacccatggccgtgacaaatgctgtgtcatggaggagc 1236 Query: 672 gaggggattcggtacaaaaagaatgaagtgttcttggatgtagtggagagtgttaacatt 731 |||||||| || ||||| ||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 1235 gaggggatccgttacaagaagaatgaagtcttcttggatgtagtagagagtgttaacatt 1176 Query: 732 cttgttaatagcaatgggcagattgtgagatcagacgttgttggggcactgaaaatgcga 791 || ||||| |||||||||||||||||||||||||| || |||||||||||||| |||||| Sbjct: 1175 ctagttaacagcaatgggcagattgtgagatcagatgtggttggggcactgaagatgcga 1116 Query: 792 acatatttgagtgggatgcccgagtgcaaacttgggttgaatgacaaggttcttttagag 851 |||||||||||||| ||||| ||||||||||| || |||||||| | ||||||||| ||| Sbjct: 1115 acatatttgagtggaatgcctgagtgcaaactcggcttgaatgatagggttcttttggag 1056 Query: 852 gctcaggggcgagcaacaaaagggaaggcaatagatcttgatgatatcaaatttcatcag 911 ||||| || ||||||| ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 1055 gctcaaggcagagcaactaaaggaaaagcgatagaccttgatgatatcaaatttcatcag 996 Query: 912 tgcgtgcgattggccagatttgagaatgacaggacgatatcattcatccctccagatgga 971 || || || || || ||||| |||||||| || || ||||| ||||| ||||| |||||| Sbjct: 995 tgtgtacgtttagctagattcgagaatgatagaactatatcgttcatacctcctgatgga 936 Query: 972 tcttttgatctgatgacatacaggctcaacactcaggtgaagcctcttatctgggtggaa 1031 ||||||||||| |||||||||||||| | ||||||||| || |||||||||||||| ||| Sbjct: 935 tcttttgatctaatgacatacaggcttagcactcaggtaaaacctcttatctgggtcgaa 876 Query: 1032 gcccaggttgaaaaacattcaagaagccggatagaattcatgattaaggcaagaagtcag 1091 || ||| |||| |||||||| |||||||| |||||| ||||| | |||||||| |||||| Sbjct: 875 gcacagattgagaaacattctagaagccgtatagaactcatggtgaaggcaaggagtcag 816 Query: 1092 tttaaggaaagaagcacagcaacaaatgttgaaattgaggttcctgttccttcagatgcc 1151 || ||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 815 ttcaaggaaagaagcacagcaacaaatgttgaaattgaagtgcctgttccttcagatgcc 756 Query: 1152 acgaacccaaatataagaacttcaatgggttctgctgcatatgcacctgagcgagatgcg 1211 || ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 755 acaaacccaaatataagaacttcaatgggttctgctgcatatgctcctgagagagatgca 696 Query: 1212 atggtctggaaaataaaatcatttcctggtggcaaagagtacatgtgcagagcggagttt 1271 |||||||||||| |||||||||| ||||||||||| || |||||||||||||| || ||| Sbjct: 695 atggtctggaaagtaaaatcattccctggtggcaaggaatacatgtgcagagcagaattt 636 Query: 1272 agtctaccaagtataactgcggaagaagcagttcctgaaaagaaggcaccgatacgagtg 1331 ||||| || || ||||| |||||||||| | || |||||||||||||| ||||||||| Sbjct: 635 agtcttcctagcataacagcggaagaaggggccccagaaaagaaggcaccaatacgagtg 576 Query: 1332 aaatttgagataccgtatttcactgtatctggtattcaggttcgctatctaaagatcatt 1391 |||||||||||||| |||||||| ||||| ||||||||||| || ||||| ||||| ||| Sbjct: 575 aaatttgagataccatatttcaccgtatcaggtattcaggtccgttatctgaagataatt 516 Query: 1392 gaaaagagtgggtaccaggcgctcccgtgggttagatacatcaccatggcaggtgaatac 1451 ||||||||||| |||||||| ||||| ||||||||||| ||||| ||||| || ||||| Sbjct: 515 gaaaagagtggttaccaggcactcccctgggttagatatatcacgatggctggcgaatat 456 Query: 1452 gaactgagacttatatgagttttctct 1478 || |||||||||||||||||||||||| Sbjct: 455 gagctgagacttatatgagttttctct 429
>gb|BT009619.1| Triticum aestivum clone wre1n.pk0123.c3:fis, full insert mRNA sequence Length = 1508 Score = 896 bits (452), Expect = 0.0 Identities = 929/1088 (85%) Strand = Plus / Plus Query: 378 aacaatgtcttcctcctcaccgcctcccgccaaaactgcaacgccgctagcatcctcctc 437 ||||| |||||||||||||||||| ||||||| |||||||| ||||| |||||||| ||| Sbjct: 12 aacaacgtcttcctcctcaccgccgcccgccagaactgcaatgccgccagcatcctgctc 71 Query: 438 ttcctccaccgcgttgtcgatgtgttcaagcactatttcgaggaattggaggaggaatca 497 |||||||||||| | |||||||||||||||||||| || ||||| ||||||||||||| Sbjct: 72 ttcctccaccgcctcgtcgatgtgttcaagcactactttgaggagctggaggaggaatct 131 Query: 498 ctgagagataactttgtcgtcgtgtatgagttgctcgatgagatgatggattttgggtac 557 ||||| || ||||| ||||||||||||||||| || |||||||||||||| || ||||| Sbjct: 132 ctgagggacaacttcgtcgtcgtgtatgagttacttgatgagatgatggacttcgggtat 191 Query: 558 ccacaatacaccgaggcaaagatattaagcgagttcatcaagacagacgcatataagatg 617 || |||||||| ||||| | ||| | || |||||||||||||| || ||||| | |||| Sbjct: 192 ccgcaatacacagaggcgacgatcctgagtgagttcatcaagaccgatgcatacaggatg 251 Query: 618 gaggtcacacagagaccaccaatggctgtgacaaatgctgtctcatggaggagtgagggg 677 |||||||||||||| || || ||||| ||||| || || || |||||| |||| |||||| Sbjct: 252 gaggtcacacagaggccgcccatggcagtgacgaacgccgtgtcatggcggagcgagggg 311 Query: 678 attcggtacaaaaagaatgaagtgttcttggatgtagtggagagtgttaacattcttgtt 737 ||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||| Sbjct: 312 attcggtacaagaagaatgaagtgttcttggatgtggttgagagtgtcaacattcttgtc 371 Query: 738 aatagcaatgggcagattgtgagatcagacgttgttggggcactgaaaatgcgaacatat 797 |||||||| |||||||| |||||||| ||| | | || || ||||| ||||| || | | Sbjct: 372 aatagcaacgggcagatcgtgagatctgacatcatcggcgcgctgaagatgcggaccttt 431 Query: 798 ttgagtgggatgcccgagtgcaaacttgggttgaatgacaaggttcttttagaggctcag 857 ||||||| ||||||||||| ||||||||||||||||| | |||||||| || || || Sbjct: 432 ctgagtggaatgcccgagtgtaaacttgggttgaatgatagagttcttttggaagcgcaa 491 Query: 858 gggcgagcaacaaaagggaaggcaatagatcttgatgatatcaaatttcatcagtgcgtg 917 || |||||||| ||||| || ||||||||||| ||||||||||||||||||||||| || Sbjct: 492 ggccgagcaactaaaggaaaagcaatagatctggatgatatcaaatttcatcagtgtgtt 551 Query: 918 cgattggccagatttgagaatgacaggacgatatcattcatccctccagatggatctttt 977 || ||| |||||||||||||||| ||||| ||||||||| |||||||||||||| ||||| Sbjct: 552 cggttgaccagatttgagaatgataggactatatcattcgtccctccagatggagctttt 611 Query: 978 gatctgatgacatacaggctcaacactcaggtgaagcctcttatctgggtggaagcccag 1037 ||||| ||||| ||||| |||| ||| |||||||||||||| |||||||| ||||| || Sbjct: 612 gatctaatgacttacagactcaccacacaggtgaagcctctgatctgggtagaagcacaa 671 Query: 1038 gttgaaaaacattcaagaagccggatagaattcatgattaaggcaagaagtcagtttaag 1097 ||||| || |||||||||||||||||||| ||||| | |||||||| || ||||| ||| Sbjct: 672 gttgagaagcattcaagaagccggatagagatcatggtgaaggcaaggagccagttcaag 731 Query: 1098 gaaagaagcacagcaacaaatgttgaaattgaggttcctgttccttcagatgccacgaac 1157 ||||||||||| | ||||||||| |||||||| || ||||| || | ||||| || ||| Sbjct: 732 gaaagaagcaccggaacaaatgtagaaattgaagtacctgtaccctatgatgcgacaaac 791 Query: 1158 ccaaatataagaacttcaatgggttctgctgcatatgcacctgagcgagatgcgatggtc 1217 ||||||||||| ||||||||||||||||| ||||||||||||||| |||| || |||||| Sbjct: 792 ccaaatataaggacttcaatgggttctgcggcatatgcacctgagagagacgcaatggtc 851 Query: 1218 tggaaaataaaatcatttcctggtggcaaagagtacatgtgcagagcggagtttagtcta 1277 |||||||| |||||||||||||||||||| || || ||||| ||||| |||||||| || Sbjct: 852 tggaaaattaaatcatttcctggtggcaaggaatatatgtgtagagcagagtttagcctt 911 Query: 1278 ccaagtataactgcggaagaagcagttcctgaaaagaaggcaccgatacgagtgaaattt 1337 || || || || ||||||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 912 cccagcattacctcggaagaagcaacccctgaaaagaaggctccaatacgtgtgaaattt 971 Query: 1338 gagataccgtatttcactgtatctggtattcaggttcgctatctaaagatcattgaaaag 1397 |||||||| ||||| || || || || ||||||||||| ||||| || |||| || || Sbjct: 972 gagataccctattttaccgtttcaggcattcaggttcgttatctgaaagtcatcgagaaa 1031 Query: 1398 agtgggtaccaggcgctcccgtgggttagatacatcaccatggcaggtgaatacgaactg 1457 ||||| |||||||| ||||| |||||||| || ||||| ||||| ||||||||||| ||| Sbjct: 1032 agtggataccaggccctcccttgggttaggtatatcacaatggccggtgaatacgagctg 1091 Query: 1458 agacttat 1465 || ||||| Sbjct: 1092 aggcttat 1099
>ref|NM_100949.1| Arabidopsis thaliana unknown protein (AT1G10730) mRNA, complete cds Length = 1287 Score = 287 bits (145), Expect = 7e-74 Identities = 472/581 (81%) Strand = Plus / Plus Query: 453 gtcgatgtgttcaagcactatttcgaggaattggaggaggaatcactgagagataacttt 512 |||||||| |||||||| || |||||||| || ||||| ||||| |||||||||||||| Sbjct: 271 gtcgatgtcttcaagcattacttcgaggagttagaggaagaatctttgagagataacttt 330 Query: 513 gtcgtcgtgtatgagttgctcgatgagatgatggattttgggtacccacaatacaccgag 572 || || ||||||||||| || || ||||||||||| ||||| ||||| || | || ||| Sbjct: 331 gtggtagtgtatgagttacttgacgagatgatggactttggttaccctcagtttactgag 390 Query: 573 gcaaagatattaagcgagttcatcaagacagacgcatataagatggaggtcacacagaga 632 |||| || | || || ||||||||||| || ||||||| ||||| || ||||||||| Sbjct: 391 gcaagaatccttagtgaattcatcaagactgatgcatatagaatggaagttacacagaga 450 Query: 633 ccaccaatggctgtgacaaatgctgtctcatggaggagtgaggggattcggtacaaaaag 692 || ||||||||||| || ||| ||||||||||||||||||||||| | || || || Sbjct: 451 cctccaatggctgtcactaattctgtctcatggaggagtgaggggttaaagtttaagaaa 510 Query: 693 aatgaagtgttcttggatgtagtggagagtgttaacattcttgttaatagcaatgggcag 752 || ||||| ||||||||||| | |||||||| || || ||||| || || |||||||| Sbjct: 511 aacgaagttttcttggatgtgatagagagtgtaaatatccttgtgaacagtaatgggcaa 570 Query: 753 attgtgagatcagacgttgttggggcactgaaaatgcgaacatatttgagtgggatgccc 812 ||||| || || || || ||||| || |||| ||||||||||| |||||||| ||||| Sbjct: 571 attgtcaggtctgatgtcgttggagctttgaagatgcgaacatacttgagtggaatgcca 630 Query: 813 gagtgcaaacttgggttgaatgacaaggttcttttagaggctcaggggcgagcaacaaaa 872 ||||| || || || |||||||||| | | || ||||| ||||| ||||||| |||| Sbjct: 631 gagtgtaagctaggcttgaatgacagaatattgttggaggcacagggacgagcaataaaa 690 Query: 873 gggaaggcaatagatcttgatgatatcaaatttcatcagtgcgtgcgattggccagattt 932 || || || || ||| | || || ||||||||||||||||| || ||||| ||| | ||| Sbjct: 691 ggaaaagccattgatttggaggacatcaaatttcatcagtgtgttcgattagcccgtttt 750 Query: 933 gagaatgacaggacgatatcattcatccctccagatggatcttttgatctgatgacatac 992 ||||| |||||||| ||||||||||| || || ||||||||||||||||| ||||| || Sbjct: 751 gagaacgacaggacaatatcattcataccacctgatggatcttttgatcttatgacgtat 810 Query: 993 aggctcaacactcaggtgaagcctcttatctgggtggaagc 1033 || |||| |||||||| ||||||||||| ||||||||||| Sbjct: 811 agactcagtactcaggtaaagcctcttatatgggtggaagc 851 Score = 85.7 bits (43), Expect = 5e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggcgctcccgtgggttaga 1427 |||||||| || || ||||||||||| ||||||||||||||||| | || ||||| ||| Sbjct: 1186 caggttcgatacctgaagatcattgagaagagtgggtaccaggcacatccatgggtgaga 1245 Query: 1428 tacatcaccatggcaggtgaatacgaactgagact 1462 || || |||||||| ||||| |||||||||||||| Sbjct: 1246 tatataaccatggctggtgagtacgaactgagact 1280
>ref|NM_104761.3| Arabidopsis thaliana unknown protein (AT1G60780) mRNA, complete cds Length = 1897 Score = 242 bits (122), Expect = 4e-60 Identities = 311/374 (83%) Strand = Plus / Plus Query: 444 caccgcgttgtcgatgtgttcaagcactatttcgaggaattggaggaggaatcactgaga 503 ||||||||||||||||| |||||||| || |||||||| || || ||||||||| |||| Sbjct: 536 caccgcgttgtcgatgttttcaagcattacttcgaggagttagaagaggaatcattgagg 595 Query: 504 gataactttgtcgtcgtgtatgagttgctcgatgagatgatggattttgggtacccacaa 563 ||||||||||| || ||||||||| | || || ||||||||||| ||||| ||||| || Sbjct: 596 gataactttgtggtagtgtatgagctacttgacgagatgatggactttggttaccctcag 655 Query: 564 tacaccgaggcaaagatattaagcgagttcatcaagacagacgcatataagatggaggtc 623 || ||||| |||| || | || || ||||||||||| || ||||||| ||||| || Sbjct: 656 tataccgaagcaagaattctcagtgaattcatcaagactgatgcatatagaatggaagtt 715 Query: 624 acacagagaccaccaatggctgtgacaaatgctgtctcatggaggagtgaggggattcgg 683 ||||||||||| |||||||||||||| ||||||||||| |||||||||||||| || | | Sbjct: 716 acacagagacctccaatggctgtgacgaatgctgtctcctggaggagtgagggaatacag 775 Query: 684 tacaaaaagaatgaagtgttcttggatgtagtggagagtgttaacattcttgttaatagc 743 ||||| ||||||||||| ||||||||||| | |||| ||| || |||||||| || || Sbjct: 776 tacaagaagaatgaagttttcttggatgttattgagaatgtaaatattcttgtcaacagt 835 Query: 744 aatgggcagattgtgagatcagacgttgttggggcactgaaaatgcgaacatatttgagt 803 |||||||| ||||| || || || |||||||| || ||||| |||||||| || |||| | Sbjct: 836 aatgggcaaattgtcaggtctgatgttgttggagcgctgaagatgcgaacttacttgact 895 Query: 804 gggatgcccgagtg 817 || ||||| ||||| Sbjct: 896 ggaatgccagagtg 909 Score = 123 bits (62), Expect = 2e-24 Identities = 191/234 (81%) Strand = Plus / Plus Query: 897 atcaaatttcatcagtgcgtgcgattggccagatttgagaatgacaggacgatatcattc 956 ||||||||||||||||| || ||||||||| | ||||| || || ||||||||||| ||| Sbjct: 989 atcaaatttcatcagtgtgttcgattggcccgttttgaaaacgataggacgatatctttc 1048 Query: 957 atccctccagatggatcttttgatctgatgacatacaggctcaacactcaggtgaagcct 1016 || || || ||||| ||||||||||||||||||| || |||| ||||||||| ||||| Sbjct: 1049 ataccacctgatggggcttttgatctgatgacatatagactcagcactcaggtaaagcca 1108 Query: 1017 cttatctgggtggaagcccaggttgaaaaacattcaagaagccggatagaattcatgatt 1076 ||||| ||||||||||| || | |||| ||||||||||| || | || | | || Sbjct: 1109 cttatatgggtggaagcacaaatagaaagtcattcaagaagtcgtgttgagatgctcata 1168 Query: 1077 aaggcaagaagtcagtttaaggaaagaagcacagcaacaaatgttgaaattgag 1130 || || ||||||||||| |||||| ||||||| ||||| || ||||| |||||| Sbjct: 1169 aaagctagaagtcagttcaaggaacgaagcaccgcaacgaacgttgagattgag 1222 Score = 117 bits (59), Expect = 1e-22 Identities = 113/131 (86%) Strand = Plus / Plus Query: 1332 aaatttgagataccgtatttcactgtatctggtattcaggttcgctatctaaagatcatt 1391 ||||||||||| || ||||||||||| || || ||||||||||| || |||||||| ||| Sbjct: 1424 aaatttgagatcccttatttcactgtttcagggattcaggttcggtacctaaagattatt 1483 Query: 1392 gaaaagagtgggtaccaggcgctcccgtgggttagatacatcaccatggcaggtgaatac 1451 || |||||||||||||| || || || ||||| |||||||| |||||||| ||||| ||| Sbjct: 1484 gagaagagtgggtaccaagcacttccatgggtgagatacataaccatggctggtgagtac 1543 Query: 1452 gaactgagact 1462 ||||| ||||| Sbjct: 1544 gaactaagact 1554 Score = 50.1 bits (25), Expect = 0.028 Identities = 91/113 (80%) Strand = Plus / Plus Query: 198 gcgctgttcctgctggacatcaagggccgcgtcctcgtctggcgcgacttccgcggcgac 257 |||||||| ||||| || |||||||| ||||| ||||||||||| || | || ||||| Sbjct: 293 gcgctgtttctgcttgatatcaagggacgcgttctcgtctggcgtgattatcgtggcgat 352 Query: 258 gtcaccgccatccaggccgagcgcttcttcaccaagctcctcgacaaggaggg 310 ||| |||| || |||||||| |||||||| |||||| |||| || ||||| Sbjct: 353 gtctccgctgctcaagccgagcgattcttcactaagctcatcgagaaagaggg 405
>gb|AY099652.1| Arabidopsis thaliana clathrin adaptor medium chain protein MU1B, putative (At1g60780) mRNA, complete cds Length = 1690 Score = 242 bits (122), Expect = 4e-60 Identities = 311/374 (83%) Strand = Plus / Plus Query: 444 caccgcgttgtcgatgtgttcaagcactatttcgaggaattggaggaggaatcactgaga 503 ||||||||||||||||| |||||||| || |||||||| || || ||||||||| |||| Sbjct: 455 caccgcgttgtcgatgttttcaagcattacttcgaggagttagaagaggaatcattgagg 514 Query: 504 gataactttgtcgtcgtgtatgagttgctcgatgagatgatggattttgggtacccacaa 563 ||||||||||| || ||||||||| | || || ||||||||||| ||||| ||||| || Sbjct: 515 gataactttgtggtagtgtatgagctacttgacgagatgatggactttggttaccctcag 574 Query: 564 tacaccgaggcaaagatattaagcgagttcatcaagacagacgcatataagatggaggtc 623 || ||||| |||| || | || || ||||||||||| || ||||||| ||||| || Sbjct: 575 tataccgaagcaagaattctcagtgaattcatcaagactgatgcatatagaatggaagtt 634 Query: 624 acacagagaccaccaatggctgtgacaaatgctgtctcatggaggagtgaggggattcgg 683 ||||||||||| |||||||||||||| ||||||||||| |||||||||||||| || | | Sbjct: 635 acacagagacctccaatggctgtgacgaatgctgtctcctggaggagtgagggaatacag 694 Query: 684 tacaaaaagaatgaagtgttcttggatgtagtggagagtgttaacattcttgttaatagc 743 ||||| ||||||||||| ||||||||||| | |||| ||| || |||||||| || || Sbjct: 695 tacaagaagaatgaagttttcttggatgttattgagaatgtaaatattcttgtcaacagt 754 Query: 744 aatgggcagattgtgagatcagacgttgttggggcactgaaaatgcgaacatatttgagt 803 |||||||| ||||| || || || |||||||| || ||||| |||||||| || |||| | Sbjct: 755 aatgggcaaattgtcaggtctgatgttgttggagcgctgaagatgcgaacttacttgact 814 Query: 804 gggatgcccgagtg 817 || ||||| ||||| Sbjct: 815 ggaatgccagagtg 828 Score = 123 bits (62), Expect = 2e-24 Identities = 191/234 (81%) Strand = Plus / Plus Query: 897 atcaaatttcatcagtgcgtgcgattggccagatttgagaatgacaggacgatatcattc 956 ||||||||||||||||| || ||||||||| | ||||| || || ||||||||||| ||| Sbjct: 908 atcaaatttcatcagtgtgttcgattggcccgttttgaaaacgataggacgatatctttc 967 Query: 957 atccctccagatggatcttttgatctgatgacatacaggctcaacactcaggtgaagcct 1016 || || || ||||| ||||||||||||||||||| || |||| ||||||||| ||||| Sbjct: 968 ataccacctgatggggcttttgatctgatgacatatagactcagcactcaggtaaagcca 1027 Query: 1017 cttatctgggtggaagcccaggttgaaaaacattcaagaagccggatagaattcatgatt 1076 ||||| ||||||||||| || | |||| ||||||||||| || | || | | || Sbjct: 1028 cttatatgggtggaagcacaaatagaaagtcattcaagaagtcgtgttgagatgctcata 1087 Query: 1077 aaggcaagaagtcagtttaaggaaagaagcacagcaacaaatgttgaaattgag 1130 || || ||||||||||| |||||| ||||||| ||||| || ||||| |||||| Sbjct: 1088 aaagctagaagtcagttcaaggaacgaagcaccgcaacgaacgttgagattgag 1141 Score = 117 bits (59), Expect = 1e-22 Identities = 113/131 (86%) Strand = Plus / Plus Query: 1332 aaatttgagataccgtatttcactgtatctggtattcaggttcgctatctaaagatcatt 1391 ||||||||||| || ||||||||||| || || ||||||||||| || |||||||| ||| Sbjct: 1343 aaatttgagatcccttatttcactgtttcagggattcaggttcggtacctaaagattatt 1402 Query: 1392 gaaaagagtgggtaccaggcgctcccgtgggttagatacatcaccatggcaggtgaatac 1451 || |||||||||||||| || || || ||||| |||||||| |||||||| ||||| ||| Sbjct: 1403 gagaagagtgggtaccaagcacttccatgggtgagatacataaccatggctggtgagtac 1462 Query: 1452 gaactgagact 1462 ||||| ||||| Sbjct: 1463 gaactaagact 1473 Score = 50.1 bits (25), Expect = 0.028 Identities = 91/113 (80%) Strand = Plus / Plus Query: 198 gcgctgttcctgctggacatcaagggccgcgtcctcgtctggcgcgacttccgcggcgac 257 |||||||| ||||| || |||||||| ||||| ||||||||||| || | || ||||| Sbjct: 212 gcgctgtttctgcttgatatcaagggacgcgttctcgtctggcgtgattatcgtggcgat 271 Query: 258 gtcaccgccatccaggccgagcgcttcttcaccaagctcctcgacaaggaggg 310 ||| |||| || |||||||| |||||||| |||||| |||| || ||||| Sbjct: 272 gtctccgctgctcaagccgagcgattcttcactaagctcatcgagaaagaggg 324
>gb|BT002144.1| Arabidopsis thaliana clathrin adaptor medium chain protein MU1B, putative (At1g60780) mRNA, complete cds Length = 1360 Score = 242 bits (122), Expect = 4e-60 Identities = 311/374 (83%) Strand = Plus / Plus Query: 444 caccgcgttgtcgatgtgttcaagcactatttcgaggaattggaggaggaatcactgaga 503 ||||||||||||||||| |||||||| || |||||||| || || ||||||||| |||| Sbjct: 262 caccgcgttgtcgatgttttcaagcattacttcgaggagttagaagaggaatcattgagg 321 Query: 504 gataactttgtcgtcgtgtatgagttgctcgatgagatgatggattttgggtacccacaa 563 ||||||||||| || ||||||||| | || || ||||||||||| ||||| ||||| || Sbjct: 322 gataactttgtggtagtgtatgagctacttgacgagatgatggactttggttaccctcag 381 Query: 564 tacaccgaggcaaagatattaagcgagttcatcaagacagacgcatataagatggaggtc 623 || ||||| |||| || | || || ||||||||||| || ||||||| ||||| || Sbjct: 382 tataccgaagcaagaattctcagtgaattcatcaagactgatgcatatagaatggaagtt 441 Query: 624 acacagagaccaccaatggctgtgacaaatgctgtctcatggaggagtgaggggattcgg 683 ||||||||||| |||||||||||||| ||||||||||| |||||||||||||| || | | Sbjct: 442 acacagagacctccaatggctgtgacgaatgctgtctcctggaggagtgagggaatacag 501 Query: 684 tacaaaaagaatgaagtgttcttggatgtagtggagagtgttaacattcttgttaatagc 743 ||||| ||||||||||| ||||||||||| | |||| ||| || |||||||| || || Sbjct: 502 tacaagaagaatgaagttttcttggatgttattgagaatgtaaatattcttgtcaacagt 561 Query: 744 aatgggcagattgtgagatcagacgttgttggggcactgaaaatgcgaacatatttgagt 803 |||||||| ||||| || || || |||||||| || ||||| |||||||| || |||| | Sbjct: 562 aatgggcaaattgtcaggtctgatgttgttggagcgctgaagatgcgaacttacttgact 621 Query: 804 gggatgcccgagtg 817 || ||||| ||||| Sbjct: 622 ggaatgccagagtg 635 Score = 123 bits (62), Expect = 2e-24 Identities = 191/234 (81%) Strand = Plus / Plus Query: 897 atcaaatttcatcagtgcgtgcgattggccagatttgagaatgacaggacgatatcattc 956 ||||||||||||||||| || ||||||||| | ||||| || || ||||||||||| ||| Sbjct: 715 atcaaatttcatcagtgtgttcgattggcccgttttgaaaacgataggacgatatctttc 774 Query: 957 atccctccagatggatcttttgatctgatgacatacaggctcaacactcaggtgaagcct 1016 || || || ||||| ||||||||||||||||||| || |||| ||||||||| ||||| Sbjct: 775 ataccacctgatggggcttttgatctgatgacatatagactcagcactcaggtaaagcca 834 Query: 1017 cttatctgggtggaagcccaggttgaaaaacattcaagaagccggatagaattcatgatt 1076 ||||| ||||||||||| || | |||| ||||||||||| || | || | | || Sbjct: 835 cttatatgggtggaagcacaaatagaaagtcattcaagaagtcgtgttgagatgctcata 894 Query: 1077 aaggcaagaagtcagtttaaggaaagaagcacagcaacaaatgttgaaattgag 1130 || || ||||||||||| |||||| ||||||| ||||| || ||||| |||||| Sbjct: 895 aaagctagaagtcagttcaaggaacgaagcaccgcaacgaacgttgagattgag 948 Score = 117 bits (59), Expect = 1e-22 Identities = 113/131 (86%) Strand = Plus / Plus Query: 1332 aaatttgagataccgtatttcactgtatctggtattcaggttcgctatctaaagatcatt 1391 ||||||||||| || ||||||||||| || || ||||||||||| || |||||||| ||| Sbjct: 1150 aaatttgagatcccttatttcactgtttcagggattcaggttcggtacctaaagattatt 1209 Query: 1392 gaaaagagtgggtaccaggcgctcccgtgggttagatacatcaccatggcaggtgaatac 1451 || |||||||||||||| || || || ||||| |||||||| |||||||| ||||| ||| Sbjct: 1210 gagaagagtgggtaccaagcacttccatgggtgagatacataaccatggctggtgagtac 1269 Query: 1452 gaactgagact 1462 ||||| ||||| Sbjct: 1270 gaactaagact 1280 Score = 50.1 bits (25), Expect = 0.028 Identities = 91/113 (80%) Strand = Plus / Plus Query: 198 gcgctgttcctgctggacatcaagggccgcgtcctcgtctggcgcgacttccgcggcgac 257 |||||||| ||||| || |||||||| ||||| ||||||||||| || | || ||||| Sbjct: 19 gcgctgtttctgcttgatatcaagggacgcgttctcgtctggcgtgattatcgtggcgat 78 Query: 258 gtcaccgccatccaggccgagcgcttcttcaccaagctcctcgacaaggaggg 310 ||| |||| || |||||||| |||||||| |||||| |||| || ||||| Sbjct: 79 gtctccgctgctcaagccgagcgattcttcactaagctcatcgagaaagaggg 131
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 232 bits (117), Expect = 3e-57 Identities = 132/137 (96%) Strand = Plus / Plus Query: 173 cgcgccgatggcgggcgcggtgtcggcgctgttcctgctggacatcaagggccgcgtcct 232 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 29159911 cgcgccgatggcgggcgcggtgtcggcgctgttccttctggacatcaagggccgcgtcct 29159970 Query: 233 cgtctggcgcgacttccgcggcgacgtcaccgccatccaggccgagcgcttcttcaccaa 292 |||||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||| Sbjct: 29159971 cgtctggcgcgactaccgcggcgacgtctccgccctccaggctgagcgcttcttcaccaa 29160030 Query: 293 gctcctcgacaaggagg 309 ||||||||||||||||| Sbjct: 29160031 gctcctcgacaaggagg 29160047 Score = 220 bits (111), Expect = 1e-53 Identities = 135/143 (94%) Strand = Plus / Plus Query: 1104 agcacagcaacaaatgttgaaattgaggttcctgttccttcagatgccacgaacccaaat 1163 |||||||||||||||||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 29162716 agcacagcaacaaatgttgaaattgaagtgcctgttccttcagatgctacgaaccctaat 29162775 Query: 1164 ataagaacttcaatgggttctgctgcatatgcacctgagcgagatgcgatggtctggaaa 1223 ||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 29162776 ataagaacttcaatgggctctgctgcatatgcacctgagagagatgcaatggtctggaaa 29162835 Query: 1224 ataaaatcatttcctggtggcaa 1246 |||||||||||||||||||||| Sbjct: 29162836 gtaaaatcatttcctggtggcaa 29162858 Score = 170 bits (86), Expect = 1e-38 Identities = 113/122 (92%) Strand = Plus / Plus Query: 1251 tacatgtgcagagcggagtttagtctaccaagtataactgcggaagaagcagttcctgaa 1310 |||||||||||||| || |||||||| |||||||||||||| |||||||||| ||||||| Sbjct: 29162944 tacatgtgcagagctgaatttagtcttccaagtataactgcagaagaagcagctcctgaa 29163003 Query: 1311 aagaaggcaccgatacgagtgaaatttgagataccgtatttcactgtatctggtattcag 1370 ||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 29163004 aagaaggcaccaatacgagtgaaatttgagataccatatttcactgtgtcgggtattcag 29163063 Query: 1371 gt 1372 || Sbjct: 29163064 gt 29163065 Score = 167 bits (84), Expect = 2e-37 Identities = 156/180 (86%) Strand = Plus / Plus Query: 521 gtatgagttgctcgatgagatgatggattttgggtacccacaatacaccgaggcaaagat 580 |||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| || || Sbjct: 29160539 gtatgagttgcttgatgaaatgatggattttgggtacccacaatacacggaggcgaaaat 29160598 Query: 581 attaagcgagttcatcaagacagacgcatataagatggaggtcacacagagaccaccaat 640 ||||| || ||||| ||||| || || || | ||||||||| ||||||| ||||| || Sbjct: 29160599 cttaagtgaattcattaagacggatgcgtacaggatggaggtatcacagaggccacctat 29160658 Query: 641 ggctgtgacaaatgctgtctcatggaggagtgaggggattcggtacaaaaagaatgaagt 700 ||| ||||||||||| || |||||| |||||||||| ||||||||||| ||||||||||| Sbjct: 29160659 ggcagtgacaaatgccgtgtcatggcggagtgagggtattcggtacaagaagaatgaagt 29160718 Score = 167 bits (84), Expect = 2e-37 Identities = 99/104 (95%) Strand = Plus / Plus Query: 699 gtgttcttggatgtagtggagagtgttaacattcttgttaatagcaatgggcagattgtg 758 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 29160796 gtgttcttggatgttgtggagagtgttaacattcttgttaacagcaatgggcagattgtg 29160855 Query: 759 agatcagacgttgttggggcactgaaaatgcgaacatatttgag 802 |||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 29160856 agatcagatgttgttggggcactgaagatgcggacatatttgag 29160899 Score = 167 bits (84), Expect = 2e-37 Identities = 105/112 (93%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggcgctcccgtgggttaga 1427 |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 29163158 caggttcgctatctgaagatcattgaaaagagtgggtaccaggcgcttccttgggttaga 29163217 Query: 1428 tacatcaccatggcaggtgaatacgaactgagacttatatgagttttctctg 1479 ||||| || ||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 29163218 tacattacaatggctggtgaatacgaactgagacttatatgagttatctctg 29163269 Score = 163 bits (82), Expect = 3e-36 Identities = 136/154 (88%) Strand = Plus / Plus Query: 307 agggcgatgcggaggcgtactcgccggtggtctacgacgacgcgggcgttacctacatgt 366 ||||||| |||||||| |||||||||||||||||||||| || || || |||||||||| Sbjct: 29160146 agggcgactcggaggcgcactcgccggtggtctacgacgatgccggggtcacctacatgt 29160205 Query: 367 ttatacagcataacaatgtcttcctcctcaccgcctcccgccaaaactgcaacgccgcta 426 | || ||||| ||||| || ||||| || |||||||||||||| |||||||||||||| | Sbjct: 29160206 tcatccagcacaacaacgtgttcctactaaccgcctcccgccagaactgcaacgccgcca 29160265 Query: 427 gcatcctcctcttcctccaccgcgttgtcgatgt 460 ||||||||||||||||||||||||| || ||||| Sbjct: 29160266 gcatcctcctcttcctccaccgcgtcgttgatgt 29160299 Score = 103 bits (52), Expect = 2e-18 Identities = 97/112 (86%) Strand = Plus / Plus Query: 801 agtgggatgcccgagtgcaaacttgggttgaatgacaaggttcttttagaggctcagggg 860 ||||| ||||| |||||||||||||| ||||| || | ||||||||| |||||||| || Sbjct: 29162140 agtggaatgcctgagtgcaaacttggattgaacgatagggttcttttggaggctcaaggc 29162199 Query: 861 cgagcaacaaaagggaaggcaatagatcttgatgatatcaaatttcatcagt 912 ||||| || ||||| || |||||||||||||||||||| |||||||| |||| Sbjct: 29162200 cgagctactaaaggaaaagcaatagatcttgatgatattaaatttcaccagt 29162251 Score = 91.7 bits (46), Expect = 8e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 1017 cttatctgggtggaagcccaggttgaaaaacattcaagaagccggatagaattcatgatt 1076 ||||||||||||||||| || |||| ||||||||||||||||| |||||| | ||| | Sbjct: 29162549 cttatctgggtggaagcacaaattgagaaacattcaagaagccgaatagaacttatggtg 29162608 Query: 1077 aaggcaagaagtcagtttaaggaaag 1102 || ||||||||||||||||||||||| Sbjct: 29162609 aaagcaagaagtcagtttaaggaaag 29162634 Score = 71.9 bits (36), Expect = 8e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 911 gtgcgtgcgattggccagatttgagaatgacaggacgatatcattcatccctccagatgg 970 ||||||| | ||||| |||||||||||||| || || ||||| ||||| ||||| || || Sbjct: 29162336 gtgcgtgaggttggctagatttgagaatgatagaactatatccttcatacctcctgacgg 29162395 Query: 971 atcttttgatctgatgacatacag 994 |||||| ||||| ||||||||||| Sbjct: 29162396 atctttcgatctaatgacatacag 29162419 Score = 69.9 bits (35), Expect = 3e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 459 gtgttcaagcactatttcgaggaattggaggaggaatcactgagagataactttgtcgt 517 |||||||||||||||||||| || |||||||| || || ||||| |||||||||||||| Sbjct: 29160385 gtgttcaagcactatttcgaagagttggaggaagagtcgctgagggataactttgtcgt 29160443 Score = 48.1 bits (24), Expect = 0.11 Identities = 46/52 (88%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 1642 tagtgtta-tttaccatggtcactgtaatttacacatcaagtacagttttga 1692 |||||||| ||||||||||| ||||||| |||| ||||||||| || ||||| Sbjct: 29163425 tagtgttactttaccatggttactgtaagttacccatcaagtatagctttga 29163476 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 tcccaccgcgcttcgcgccgat 181 |||||||||||||||||||||| Sbjct: 14203404 tcccaccgcgcttcgcgccgat 14203425
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0421H07 Length = 158126 Score = 232 bits (117), Expect = 3e-57 Identities = 132/137 (96%) Strand = Plus / Plus Query: 173 cgcgccgatggcgggcgcggtgtcggcgctgttcctgctggacatcaagggccgcgtcct 232 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 120277 cgcgccgatggcgggcgcggtgtcggcgctgttccttctggacatcaagggccgcgtcct 120336 Query: 233 cgtctggcgcgacttccgcggcgacgtcaccgccatccaggccgagcgcttcttcaccaa 292 |||||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||| Sbjct: 120337 cgtctggcgcgactaccgcggcgacgtctccgccctccaggctgagcgcttcttcaccaa 120396 Query: 293 gctcctcgacaaggagg 309 ||||||||||||||||| Sbjct: 120397 gctcctcgacaaggagg 120413 Score = 220 bits (111), Expect = 1e-53 Identities = 135/143 (94%) Strand = Plus / Plus Query: 1104 agcacagcaacaaatgttgaaattgaggttcctgttccttcagatgccacgaacccaaat 1163 |||||||||||||||||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 123082 agcacagcaacaaatgttgaaattgaagtgcctgttccttcagatgctacgaaccctaat 123141 Query: 1164 ataagaacttcaatgggttctgctgcatatgcacctgagcgagatgcgatggtctggaaa 1223 ||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 123142 ataagaacttcaatgggctctgctgcatatgcacctgagagagatgcaatggtctggaaa 123201 Query: 1224 ataaaatcatttcctggtggcaa 1246 |||||||||||||||||||||| Sbjct: 123202 gtaaaatcatttcctggtggcaa 123224 Score = 170 bits (86), Expect = 1e-38 Identities = 113/122 (92%) Strand = Plus / Plus Query: 1251 tacatgtgcagagcggagtttagtctaccaagtataactgcggaagaagcagttcctgaa 1310 |||||||||||||| || |||||||| |||||||||||||| |||||||||| ||||||| Sbjct: 123310 tacatgtgcagagctgaatttagtcttccaagtataactgcagaagaagcagctcctgaa 123369 Query: 1311 aagaaggcaccgatacgagtgaaatttgagataccgtatttcactgtatctggtattcag 1370 ||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 123370 aagaaggcaccaatacgagtgaaatttgagataccatatttcactgtgtcgggtattcag 123429 Query: 1371 gt 1372 || Sbjct: 123430 gt 123431 Score = 167 bits (84), Expect = 2e-37 Identities = 156/180 (86%) Strand = Plus / Plus Query: 521 gtatgagttgctcgatgagatgatggattttgggtacccacaatacaccgaggcaaagat 580 |||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| || || Sbjct: 120905 gtatgagttgcttgatgaaatgatggattttgggtacccacaatacacggaggcgaaaat 120964 Query: 581 attaagcgagttcatcaagacagacgcatataagatggaggtcacacagagaccaccaat 640 ||||| || ||||| ||||| || || || | ||||||||| ||||||| ||||| || Sbjct: 120965 cttaagtgaattcattaagacggatgcgtacaggatggaggtatcacagaggccacctat 121024 Query: 641 ggctgtgacaaatgctgtctcatggaggagtgaggggattcggtacaaaaagaatgaagt 700 ||| ||||||||||| || |||||| |||||||||| ||||||||||| ||||||||||| Sbjct: 121025 ggcagtgacaaatgccgtgtcatggcggagtgagggtattcggtacaagaagaatgaagt 121084 Score = 167 bits (84), Expect = 2e-37 Identities = 99/104 (95%) Strand = Plus / Plus Query: 699 gtgttcttggatgtagtggagagtgttaacattcttgttaatagcaatgggcagattgtg 758 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121162 gtgttcttggatgttgtggagagtgttaacattcttgttaacagcaatgggcagattgtg 121221 Query: 759 agatcagacgttgttggggcactgaaaatgcgaacatatttgag 802 |||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 121222 agatcagatgttgttggggcactgaagatgcggacatatttgag 121265 Score = 167 bits (84), Expect = 2e-37 Identities = 105/112 (93%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggcgctcccgtgggttaga 1427 |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 123524 caggttcgctatctgaagatcattgaaaagagtgggtaccaggcgcttccttgggttaga 123583 Query: 1428 tacatcaccatggcaggtgaatacgaactgagacttatatgagttttctctg 1479 ||||| || ||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 123584 tacattacaatggctggtgaatacgaactgagacttatatgagttatctctg 123635 Score = 163 bits (82), Expect = 3e-36 Identities = 136/154 (88%) Strand = Plus / Plus Query: 307 agggcgatgcggaggcgtactcgccggtggtctacgacgacgcgggcgttacctacatgt 366 ||||||| |||||||| |||||||||||||||||||||| || || || |||||||||| Sbjct: 120512 agggcgactcggaggcgcactcgccggtggtctacgacgatgccggggtcacctacatgt 120571 Query: 367 ttatacagcataacaatgtcttcctcctcaccgcctcccgccaaaactgcaacgccgcta 426 | || ||||| ||||| || ||||| || |||||||||||||| |||||||||||||| | Sbjct: 120572 tcatccagcacaacaacgtgttcctactaaccgcctcccgccagaactgcaacgccgcca 120631 Query: 427 gcatcctcctcttcctccaccgcgttgtcgatgt 460 ||||||||||||||||||||||||| || ||||| Sbjct: 120632 gcatcctcctcttcctccaccgcgtcgttgatgt 120665 Score = 103 bits (52), Expect = 2e-18 Identities = 97/112 (86%) Strand = Plus / Plus Query: 801 agtgggatgcccgagtgcaaacttgggttgaatgacaaggttcttttagaggctcagggg 860 ||||| ||||| |||||||||||||| ||||| || | ||||||||| |||||||| || Sbjct: 122506 agtggaatgcctgagtgcaaacttggattgaacgatagggttcttttggaggctcaaggc 122565 Query: 861 cgagcaacaaaagggaaggcaatagatcttgatgatatcaaatttcatcagt 912 ||||| || ||||| || |||||||||||||||||||| |||||||| |||| Sbjct: 122566 cgagctactaaaggaaaagcaatagatcttgatgatattaaatttcaccagt 122617 Score = 91.7 bits (46), Expect = 8e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 1017 cttatctgggtggaagcccaggttgaaaaacattcaagaagccggatagaattcatgatt 1076 ||||||||||||||||| || |||| ||||||||||||||||| |||||| | ||| | Sbjct: 122915 cttatctgggtggaagcacaaattgagaaacattcaagaagccgaatagaacttatggtg 122974 Query: 1077 aaggcaagaagtcagtttaaggaaag 1102 || ||||||||||||||||||||||| Sbjct: 122975 aaagcaagaagtcagtttaaggaaag 123000 Score = 71.9 bits (36), Expect = 8e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 911 gtgcgtgcgattggccagatttgagaatgacaggacgatatcattcatccctccagatgg 970 ||||||| | ||||| |||||||||||||| || || ||||| ||||| ||||| || || Sbjct: 122702 gtgcgtgaggttggctagatttgagaatgatagaactatatccttcatacctcctgacgg 122761 Query: 971 atcttttgatctgatgacatacag 994 |||||| ||||| ||||||||||| Sbjct: 122762 atctttcgatctaatgacatacag 122785 Score = 69.9 bits (35), Expect = 3e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 459 gtgttcaagcactatttcgaggaattggaggaggaatcactgagagataactttgtcgt 517 |||||||||||||||||||| || |||||||| || || ||||| |||||||||||||| Sbjct: 120751 gtgttcaagcactatttcgaagagttggaggaagagtcgctgagggataactttgtcgt 120809 Score = 48.1 bits (24), Expect = 0.11 Identities = 46/52 (88%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 1642 tagtgtta-tttaccatggtcactgtaatttacacatcaagtacagttttga 1692 |||||||| ||||||||||| ||||||| |||| ||||||||| || ||||| Sbjct: 123791 tagtgttactttaccatggttactgtaagttacccatcaagtatagctttga 123842
>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684B02 Length = 132470 Score = 232 bits (117), Expect = 3e-57 Identities = 132/137 (96%) Strand = Plus / Plus Query: 173 cgcgccgatggcgggcgcggtgtcggcgctgttcctgctggacatcaagggccgcgtcct 232 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 5698 cgcgccgatggcgggcgcggtgtcggcgctgttccttctggacatcaagggccgcgtcct 5757 Query: 233 cgtctggcgcgacttccgcggcgacgtcaccgccatccaggccgagcgcttcttcaccaa 292 |||||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||| Sbjct: 5758 cgtctggcgcgactaccgcggcgacgtctccgccctccaggctgagcgcttcttcaccaa 5817 Query: 293 gctcctcgacaaggagg 309 ||||||||||||||||| Sbjct: 5818 gctcctcgacaaggagg 5834 Score = 220 bits (111), Expect = 1e-53 Identities = 135/143 (94%) Strand = Plus / Plus Query: 1104 agcacagcaacaaatgttgaaattgaggttcctgttccttcagatgccacgaacccaaat 1163 |||||||||||||||||||||||||| || ||||||||||||||||| |||||||| ||| Sbjct: 8503 agcacagcaacaaatgttgaaattgaagtgcctgttccttcagatgctacgaaccctaat 8562 Query: 1164 ataagaacttcaatgggttctgctgcatatgcacctgagcgagatgcgatggtctggaaa 1223 ||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 8563 ataagaacttcaatgggctctgctgcatatgcacctgagagagatgcaatggtctggaaa 8622 Query: 1224 ataaaatcatttcctggtggcaa 1246 |||||||||||||||||||||| Sbjct: 8623 gtaaaatcatttcctggtggcaa 8645 Score = 170 bits (86), Expect = 1e-38 Identities = 113/122 (92%) Strand = Plus / Plus Query: 1251 tacatgtgcagagcggagtttagtctaccaagtataactgcggaagaagcagttcctgaa 1310 |||||||||||||| || |||||||| |||||||||||||| |||||||||| ||||||| Sbjct: 8731 tacatgtgcagagctgaatttagtcttccaagtataactgcagaagaagcagctcctgaa 8790 Query: 1311 aagaaggcaccgatacgagtgaaatttgagataccgtatttcactgtatctggtattcag 1370 ||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 8791 aagaaggcaccaatacgagtgaaatttgagataccatatttcactgtgtcgggtattcag 8850 Query: 1371 gt 1372 || Sbjct: 8851 gt 8852 Score = 167 bits (84), Expect = 2e-37 Identities = 156/180 (86%) Strand = Plus / Plus Query: 521 gtatgagttgctcgatgagatgatggattttgggtacccacaatacaccgaggcaaagat 580 |||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| || || Sbjct: 6326 gtatgagttgcttgatgaaatgatggattttgggtacccacaatacacggaggcgaaaat 6385 Query: 581 attaagcgagttcatcaagacagacgcatataagatggaggtcacacagagaccaccaat 640 ||||| || ||||| ||||| || || || | ||||||||| ||||||| ||||| || Sbjct: 6386 cttaagtgaattcattaagacggatgcgtacaggatggaggtatcacagaggccacctat 6445 Query: 641 ggctgtgacaaatgctgtctcatggaggagtgaggggattcggtacaaaaagaatgaagt 700 ||| ||||||||||| || |||||| |||||||||| ||||||||||| ||||||||||| Sbjct: 6446 ggcagtgacaaatgccgtgtcatggcggagtgagggtattcggtacaagaagaatgaagt 6505 Score = 167 bits (84), Expect = 2e-37 Identities = 99/104 (95%) Strand = Plus / Plus Query: 699 gtgttcttggatgtagtggagagtgttaacattcttgttaatagcaatgggcagattgtg 758 |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 6583 gtgttcttggatgttgtggagagtgttaacattcttgttaacagcaatgggcagattgtg 6642 Query: 759 agatcagacgttgttggggcactgaaaatgcgaacatatttgag 802 |||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 6643 agatcagatgttgttggggcactgaagatgcggacatatttgag 6686 Score = 167 bits (84), Expect = 2e-37 Identities = 105/112 (93%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggcgctcccgtgggttaga 1427 |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 8945 caggttcgctatctgaagatcattgaaaagagtgggtaccaggcgcttccttgggttaga 9004 Query: 1428 tacatcaccatggcaggtgaatacgaactgagacttatatgagttttctctg 1479 ||||| || ||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 9005 tacattacaatggctggtgaatacgaactgagacttatatgagttatctctg 9056 Score = 163 bits (82), Expect = 3e-36 Identities = 136/154 (88%) Strand = Plus / Plus Query: 307 agggcgatgcggaggcgtactcgccggtggtctacgacgacgcgggcgttacctacatgt 366 ||||||| |||||||| |||||||||||||||||||||| || || || |||||||||| Sbjct: 5933 agggcgactcggaggcgcactcgccggtggtctacgacgatgccggggtcacctacatgt 5992 Query: 367 ttatacagcataacaatgtcttcctcctcaccgcctcccgccaaaactgcaacgccgcta 426 | || ||||| ||||| || ||||| || |||||||||||||| |||||||||||||| | Sbjct: 5993 tcatccagcacaacaacgtgttcctactaaccgcctcccgccagaactgcaacgccgcca 6052 Query: 427 gcatcctcctcttcctccaccgcgttgtcgatgt 460 ||||||||||||||||||||||||| || ||||| Sbjct: 6053 gcatcctcctcttcctccaccgcgtcgttgatgt 6086 Score = 103 bits (52), Expect = 2e-18 Identities = 97/112 (86%) Strand = Plus / Plus Query: 801 agtgggatgcccgagtgcaaacttgggttgaatgacaaggttcttttagaggctcagggg 860 ||||| ||||| |||||||||||||| ||||| || | ||||||||| |||||||| || Sbjct: 7927 agtggaatgcctgagtgcaaacttggattgaacgatagggttcttttggaggctcaaggc 7986 Query: 861 cgagcaacaaaagggaaggcaatagatcttgatgatatcaaatttcatcagt 912 ||||| || ||||| || |||||||||||||||||||| |||||||| |||| Sbjct: 7987 cgagctactaaaggaaaagcaatagatcttgatgatattaaatttcaccagt 8038 Score = 91.7 bits (46), Expect = 8e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 1017 cttatctgggtggaagcccaggttgaaaaacattcaagaagccggatagaattcatgatt 1076 ||||||||||||||||| || |||| ||||||||||||||||| |||||| | ||| | Sbjct: 8336 cttatctgggtggaagcacaaattgagaaacattcaagaagccgaatagaacttatggtg 8395 Query: 1077 aaggcaagaagtcagtttaaggaaag 1102 || ||||||||||||||||||||||| Sbjct: 8396 aaagcaagaagtcagtttaaggaaag 8421 Score = 71.9 bits (36), Expect = 8e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 911 gtgcgtgcgattggccagatttgagaatgacaggacgatatcattcatccctccagatgg 970 ||||||| | ||||| |||||||||||||| || || ||||| ||||| ||||| || || Sbjct: 8123 gtgcgtgaggttggctagatttgagaatgatagaactatatccttcatacctcctgacgg 8182 Query: 971 atcttttgatctgatgacatacag 994 |||||| ||||| ||||||||||| Sbjct: 8183 atctttcgatctaatgacatacag 8206 Score = 69.9 bits (35), Expect = 3e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 459 gtgttcaagcactatttcgaggaattggaggaggaatcactgagagataactttgtcgt 517 |||||||||||||||||||| || |||||||| || || ||||| |||||||||||||| Sbjct: 6172 gtgttcaagcactatttcgaagagttggaggaagagtcgctgagggataactttgtcgt 6230 Score = 48.1 bits (24), Expect = 0.11 Identities = 46/52 (88%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 1642 tagtgtta-tttaccatggtcactgtaatttacacatcaagtacagttttga 1692 |||||||| ||||||||||| ||||||| |||| ||||||||| || ||||| Sbjct: 9212 tagtgttactttaccatggttactgtaagttacccatcaagtatagctttga 9263
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 206 bits (104), Expect = 2e-49 Identities = 122/128 (95%) Strand = Plus / Minus Query: 182 ggcgggcgcggtgtcggcgctgttcctgctggacatcaagggccgcgtcctcgtctggcg 241 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 30834 ggcgggggcggtgtcggcgctgttcctgctcgacatcaagggccgcgtcctcgtctggcg 30775 Query: 242 cgacttccgcggcgacgtcaccgccatccaggccgagcgcttcttcaccaagctcctcga 301 ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 30774 cgactaccgcggcgacgtctccgcgctccaggccgagcgcttcttcaccaagctcctcga 30715 Query: 302 caaggagg 309 |||||||| Sbjct: 30714 caaggagg 30707 Score = 182 bits (92), Expect = 3e-42 Identities = 158/180 (87%) Strand = Plus / Minus Query: 521 gtatgagttgctcgatgagatgatggattttgggtacccacaatacaccgaggcaaagat 580 |||||||||||| ||||||||||||||||| ||||||||||||||||| || |||| ||| Sbjct: 30208 gtatgagttgcttgatgagatgatggatttcgggtacccacaatacacggaagcaatgat 30149 Query: 581 attaagcgagttcatcaagacagacgcatataagatggaggtcacacagagaccaccaat 640 | ||||||||||| || || ||||| || | |||||||||||| ||||| || || || Sbjct: 30148 cctgagcgagttcattaaaacggacgcgtacaggatggaggtcactcagaggccgcccat 30089 Query: 641 ggctgtgacaaatgctgtctcatggaggagtgaggggattcggtacaaaaagaatgaagt 700 ||| |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 30088 ggcagtgacaaatgctgtgtcatggaggagcgaggggattcggtacaagaagaatgaagt 30029 Score = 172 bits (87), Expect = 3e-39 Identities = 129/143 (90%) Strand = Plus / Minus Query: 1104 agcacagcaacaaatgttgaaattgaggttcctgttccttcagatgccacgaacccaaat 1163 ||||||||||||||||| |||||||| || || || ||| ||| | || ||||||||| Sbjct: 28666 agcacagcaacaaatgtagaaattgaagtaccagtgcctgaggattcgacaaacccaaat 28607 Query: 1164 ataagaacttcaatgggttctgctgcatatgcacctgagcgagatgcgatggtctggaaa 1223 ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 28606 ataagaacttcaatgggctctgcggcatatgcacctgagagagatgcgatggtctggaaa 28547 Query: 1224 ataaaatcatttcctggtggcaa 1246 ||||||||||||||||||||||| Sbjct: 28546 ataaaatcatttcctggtggcaa 28524 Score = 129 bits (65), Expect = 4e-26 Identities = 107/121 (88%) Strand = Plus / Minus Query: 340 acgacgacgcgggcgttacctacatgtttatacagcataacaatgtcttcctcctcaccg 399 |||| ||||| ||||| |||||||||| || ||||| |||||||| ||||||||||||| Sbjct: 30595 acgatgacgccggcgtctcctacatgttcatccagcacaacaatgtgttcctcctcaccg 30536 Query: 400 cctcccgccaaaactgcaacgccgctagcatcctcctcttcctccaccgcgttgtcgatg 459 | ||||| || |||||||||||||| ||||| |||||||||||||||||||| ||||||| Sbjct: 30535 cgtcccgtcagaactgcaacgccgccagcatactcctcttcctccaccgcgtcgtcgatg 30476 Query: 460 t 460 | Sbjct: 30475 t 30475 Score = 107 bits (54), Expect = 1e-19 Identities = 69/74 (93%) Strand = Plus / Minus Query: 921 ttggccagatttgagaatgacaggacgatatcattcatccctccagatggatcttttgat 980 |||||||||||||||||||||||||| ||||| ||||| |||||||||||||| |||||| Sbjct: 29037 ttggccagatttgagaatgacaggactatatccttcattcctccagatggatcatttgat 28978 Query: 981 ctgatgacatacag 994 |||||||| ||||| Sbjct: 28977 ctgatgacttacag 28964 Score = 95.6 bits (48), Expect = 5e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 801 agtgggatgcccgagtgcaaacttgggttgaatgacaaggttcttttagaggctcagggg 860 ||||| ||||||||||||||||| ||||||||||| | |||||| || |||||||| || Sbjct: 29263 agtggaatgcccgagtgcaaactggggttgaatgatagggttctcttggaggctcaaggc 29204 Query: 861 cgagcaacaaaagggaaggcaatagatcttgatgatatcaaatttcatcagt 912 ||| |||| ||||| || ||||||||| | || ||||||||||| ||||||| Sbjct: 29203 cgaacaactaaaggaaaagcaatagatttggacgatatcaaattccatcagt 29152 Score = 87.7 bits (44), Expect = 1e-13 Identities = 62/68 (91%) Strand = Plus / Minus Query: 1305 cctgaaaagaaggcaccgatacgagtgaaatttgagataccgtatttcactgtatctggt 1364 |||||||||||||| |||||||| ||||||||||||||||||||||| || || || ||| Sbjct: 28375 cctgaaaagaaggctccgatacgtgtgaaatttgagataccgtattttaccgtgtcgggt 28316 Query: 1365 attcaggt 1372 |||||||| Sbjct: 28315 attcaggt 28308 Score = 77.8 bits (39), Expect = 1e-10 Identities = 72/83 (86%) Strand = Plus / Minus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggcgctcccgtgggttaga 1427 |||||||||||||| || ||||| ||||||||||| || ||||| || || |||||| || Sbjct: 28220 caggttcgctatctgaaaatcatcgaaaagagtggatatcaggcccttccttgggttcga 28161 Query: 1428 tacatcaccatggcaggtgaata 1450 |||||||| ||||| |||||||| Sbjct: 28160 tacatcacaatggctggtgaata 28138 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Minus Query: 699 gtgttcttggatgtagtggagagtgttaacattcttgttaatagcaatgggcagattgtg 758 |||||||||||||| ||||||||||| || || || ||||| |||||||||||||| ||| Sbjct: 29942 gtgttcttggatgtggtggagagtgtcaatatcctcgttaacagcaatgggcagatagtg 29883 Query: 759 ag 760 || Sbjct: 29882 ag 29881 Score = 63.9 bits (32), Expect = 2e-06 Identities = 53/60 (88%) Strand = Plus / Minus Query: 1005 caggtgaagcctcttatctgggtggaagcccaggttgaaaaacattcaagaagccggata 1064 |||||||| |||||||||||||| ||||| || || || |||||||||||||| |||||| Sbjct: 28863 caggtgaaacctcttatctgggtagaagcacaagtggagaaacattcaagaagtcggata 28804 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Minus Query: 459 gtgttcaagcactatttcgaggaattggaggaggaatcactgagagataactttgtcgt 517 ||||||||||| || |||||||| |||||||||||||| |||| || ||||| ||||| Sbjct: 30374 gtgttcaagcattacttcgaggagctggaggaggaatcattgagggacaacttcgtcgt 30316
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 206 bits (104), Expect = 2e-49 Identities = 122/128 (95%) Strand = Plus / Minus Query: 182 ggcgggcgcggtgtcggcgctgttcctgctggacatcaagggccgcgtcctcgtctggcg 241 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 26748895 ggcgggggcggtgtcggcgctgttcctgctcgacatcaagggccgcgtcctcgtctggcg 26748836 Query: 242 cgacttccgcggcgacgtcaccgccatccaggccgagcgcttcttcaccaagctcctcga 301 ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 26748835 cgactaccgcggcgacgtctccgcgctccaggccgagcgcttcttcaccaagctcctcga 26748776 Query: 302 caaggagg 309 |||||||| Sbjct: 26748775 caaggagg 26748768 Score = 182 bits (92), Expect = 3e-42 Identities = 158/180 (87%) Strand = Plus / Minus Query: 521 gtatgagttgctcgatgagatgatggattttgggtacccacaatacaccgaggcaaagat 580 |||||||||||| ||||||||||||||||| ||||||||||||||||| || |||| ||| Sbjct: 26748269 gtatgagttgcttgatgagatgatggatttcgggtacccacaatacacggaagcaatgat 26748210 Query: 581 attaagcgagttcatcaagacagacgcatataagatggaggtcacacagagaccaccaat 640 | ||||||||||| || || ||||| || | |||||||||||| ||||| || || || Sbjct: 26748209 cctgagcgagttcattaaaacggacgcgtacaggatggaggtcactcagaggccgcccat 26748150 Query: 641 ggctgtgacaaatgctgtctcatggaggagtgaggggattcggtacaaaaagaatgaagt 700 ||| |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 26748149 ggcagtgacaaatgctgtgtcatggaggagcgaggggattcggtacaagaagaatgaagt 26748090 Score = 172 bits (87), Expect = 3e-39 Identities = 129/143 (90%) Strand = Plus / Minus Query: 1104 agcacagcaacaaatgttgaaattgaggttcctgttccttcagatgccacgaacccaaat 1163 ||||||||||||||||| |||||||| || || || ||| ||| | || ||||||||| Sbjct: 26746727 agcacagcaacaaatgtagaaattgaagtaccagtgcctgaggattcgacaaacccaaat 26746668 Query: 1164 ataagaacttcaatgggttctgctgcatatgcacctgagcgagatgcgatggtctggaaa 1223 ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 26746667 ataagaacttcaatgggctctgcggcatatgcacctgagagagatgcgatggtctggaaa 26746608 Query: 1224 ataaaatcatttcctggtggcaa 1246 ||||||||||||||||||||||| Sbjct: 26746607 ataaaatcatttcctggtggcaa 26746585 Score = 129 bits (65), Expect = 4e-26 Identities = 107/121 (88%) Strand = Plus / Minus Query: 340 acgacgacgcgggcgttacctacatgtttatacagcataacaatgtcttcctcctcaccg 399 |||| ||||| ||||| |||||||||| || ||||| |||||||| ||||||||||||| Sbjct: 26748656 acgatgacgccggcgtctcctacatgttcatccagcacaacaatgtgttcctcctcaccg 26748597 Query: 400 cctcccgccaaaactgcaacgccgctagcatcctcctcttcctccaccgcgttgtcgatg 459 | ||||| || |||||||||||||| ||||| |||||||||||||||||||| ||||||| Sbjct: 26748596 cgtcccgtcagaactgcaacgccgccagcatactcctcttcctccaccgcgtcgtcgatg 26748537 Query: 460 t 460 | Sbjct: 26748536 t 26748536 Score = 107 bits (54), Expect = 1e-19 Identities = 69/74 (93%) Strand = Plus / Minus Query: 921 ttggccagatttgagaatgacaggacgatatcattcatccctccagatggatcttttgat 980 |||||||||||||||||||||||||| ||||| ||||| |||||||||||||| |||||| Sbjct: 26747098 ttggccagatttgagaatgacaggactatatccttcattcctccagatggatcatttgat 26747039 Query: 981 ctgatgacatacag 994 |||||||| ||||| Sbjct: 26747038 ctgatgacttacag 26747025 Score = 95.6 bits (48), Expect = 5e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 801 agtgggatgcccgagtgcaaacttgggttgaatgacaaggttcttttagaggctcagggg 860 ||||| ||||||||||||||||| ||||||||||| | |||||| || |||||||| || Sbjct: 26747324 agtggaatgcccgagtgcaaactggggttgaatgatagggttctcttggaggctcaaggc 26747265 Query: 861 cgagcaacaaaagggaaggcaatagatcttgatgatatcaaatttcatcagt 912 ||| |||| ||||| || ||||||||| | || ||||||||||| ||||||| Sbjct: 26747264 cgaacaactaaaggaaaagcaatagatttggacgatatcaaattccatcagt 26747213 Score = 87.7 bits (44), Expect = 1e-13 Identities = 62/68 (91%) Strand = Plus / Minus Query: 1305 cctgaaaagaaggcaccgatacgagtgaaatttgagataccgtatttcactgtatctggt 1364 |||||||||||||| |||||||| ||||||||||||||||||||||| || || || ||| Sbjct: 26746436 cctgaaaagaaggctccgatacgtgtgaaatttgagataccgtattttaccgtgtcgggt 26746377 Query: 1365 attcaggt 1372 |||||||| Sbjct: 26746376 attcaggt 26746369 Score = 77.8 bits (39), Expect = 1e-10 Identities = 72/83 (86%) Strand = Plus / Minus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggcgctcccgtgggttaga 1427 |||||||||||||| || ||||| ||||||||||| || ||||| || || |||||| || Sbjct: 26746281 caggttcgctatctgaaaatcatcgaaaagagtggatatcaggcccttccttgggttcga 26746222 Query: 1428 tacatcaccatggcaggtgaata 1450 |||||||| ||||| |||||||| Sbjct: 26746221 tacatcacaatggctggtgaata 26746199 Score = 67.9 bits (34), Expect = 1e-07 Identities = 55/62 (88%) Strand = Plus / Minus Query: 699 gtgttcttggatgtagtggagagtgttaacattcttgttaatagcaatgggcagattgtg 758 |||||||||||||| ||||||||||| || || || ||||| |||||||||||||| ||| Sbjct: 26748003 gtgttcttggatgtggtggagagtgtcaatatcctcgttaacagcaatgggcagatagtg 26747944 Query: 759 ag 760 || Sbjct: 26747943 ag 26747942 Score = 63.9 bits (32), Expect = 2e-06 Identities = 53/60 (88%) Strand = Plus / Minus Query: 1005 caggtgaagcctcttatctgggtggaagcccaggttgaaaaacattcaagaagccggata 1064 |||||||| |||||||||||||| ||||| || || || |||||||||||||| |||||| Sbjct: 26746924 caggtgaaacctcttatctgggtagaagcacaagtggagaaacattcaagaagtcggata 26746865 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Minus Query: 459 gtgttcaagcactatttcgaggaattggaggaggaatcactgagagataactttgtcgt 517 ||||||||||| || |||||||| |||||||||||||| |||| || ||||| ||||| Sbjct: 26748435 gtgttcaagcattacttcgaggagctggaggaggaatcattgagggacaacttcgtcgt 26748377
>gb|AC002292.1|AC002292 Arabidopsis thaliana BAC F8A5, complete sequence Length = 120787 Score = 121 bits (61), Expect = 9e-24 Identities = 139/165 (84%) Strand = Plus / Minus Query: 537 gagatgatggattttgggtacccacaatacaccgaggcaaagatattaagcgagttcatc 596 ||||||||||| ||||| ||||| || || ||||| |||| || | || || |||||| Sbjct: 94915 gagatgatggactttggttaccctcagtataccgaagcaagaattctcagtgaattcatc 94856 Query: 597 aagacagacgcatataagatggaggtcacacagagaccaccaatggctgtgacaaatgct 656 ||||| || ||||||| ||||| || ||||||||||| |||||||||||||| |||||| Sbjct: 94855 aagactgatgcatatagaatggaagttacacagagacctccaatggctgtgacgaatgct 94796 Query: 657 gtctcatggaggagtgaggggattcggtacaaaaagaatgaagtg 701 ||||| |||||||||||||| || | |||||| |||||||||||| Sbjct: 94795 gtctcctggaggagtgagggaatacagtacaagaagaatgaagtg 94751 Score = 83.8 bits (42), Expect = 2e-12 Identities = 81/94 (86%) Strand = Plus / Minus Query: 1369 aggttcgctatctaaagatcattgaaaagagtgggtaccaggcgctcccgtgggttagat 1428 ||||||| || |||||||| ||||| |||||||||||||| || || || ||||| |||| Sbjct: 93379 aggttcggtacctaaagattattgagaagagtgggtaccaagcacttccatgggtgagat 93320 Query: 1429 acatcaccatggcaggtgaatacgaactgagact 1462 |||| |||||||| ||||| |||||||| ||||| Sbjct: 93319 acataaccatggctggtgagtacgaactaagact 93286 Score = 71.9 bits (36), Expect = 8e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 918 cgattggccagatttgagaatgacaggacgatatcattcatccctccagatggatctttt 977 ||||||||| | ||||| || || ||||||||||| ||||| || || ||||| ||||| Sbjct: 94209 cgattggcccgttttgaaaacgataggacgatatctttcataccacctgatggggctttt 94150 Query: 978 gatctgatgacatacaggctcaacactcaggt 1009 |||||||||||||| || |||| ||||||||| Sbjct: 94149 gatctgatgacatatagactcagcactcaggt 94118 Score = 50.1 bits (25), Expect = 0.028 Identities = 46/53 (86%) Strand = Plus / Minus Query: 462 ttcaagcactatttcgaggaattggaggaggaatcactgagagataactttgt 514 |||||||| || |||||||| || || ||||||||| |||| ||||||||||| Sbjct: 95133 ttcaagcattacttcgaggagttagaagaggaatcattgagggataactttgt 95081 Score = 48.1 bits (24), Expect = 0.11 Identities = 75/92 (81%) Strand = Plus / Minus Query: 702 ttcttggatgtagtggagagtgttaacattcttgttaatagcaatgggcagattgtgaga 761 ||||||||||| | |||| ||| || |||||||| || || |||||||| ||||| || Sbjct: 94667 ttcttggatgttattgagaatgtaaatattcttgtcaacagtaatgggcaaattgtcagg 94608 Query: 762 tcagacgttgttggggcactgaaaatgcgaac 793 || || |||||||| || ||||| |||||||| Sbjct: 94607 tctgatgttgttggagcgctgaagatgcgaac 94576 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Minus Query: 198 gcgctgttcctgctggacatcaagggccgcgtcctcgtctggcg 241 |||||||| ||||| || |||||||| ||||| ||||||||||| Sbjct: 95857 gcgctgtttctgcttgatatcaagggacgcgttctcgtctggcg 95814 Score = 42.1 bits (21), Expect = 6.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 1332 aaatttgagataccgtatttcactgtatctggtattcaggt 1372 ||||||||||| || ||||||||||| || || |||||||| Sbjct: 93497 aaatttgagatcccttatttcactgtttcagggattcaggt 93457
>dbj|AP004918.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT13I21, TM0076a, complete sequence Length = 71794 Score = 121 bits (61), Expect = 9e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 201 ctgttcctgctggacatcaagggccgcgtcctcgtctggcgcgacttccgcggcgacgtc 260 |||||||| || |||||||| |||||||||||| |||||||||||| ||||||||||||| Sbjct: 56732 ctgttcctcctcgacatcaaaggccgcgtcctcatctggcgcgactaccgcggcgacgtc 56791 Query: 261 accgccatccaggccgagcgcttcttcaccaagctcctcga 301 |||||| || | ||||| |||||||||||||||||| |||| Sbjct: 56792 accgccctcgacgccgaacgcttcttcaccaagctcatcga 56832 Score = 73.8 bits (37), Expect = 2e-09 Identities = 85/101 (84%) Strand = Plus / Plus Query: 702 ttcttggatgtagtggagagtgttaacattcttgttaatagcaatgggcagattgtgaga 761 ||||||||||| ||||||||||| ||||| ||||| ||||||||||| || || | ||| Sbjct: 57598 ttcttggatgtggtggagagtgtgaacatacttgtcaatagcaatggacaaataattaga 57657 Query: 762 tcagacgttgttggggcactgaaaatgcgaacatatttgag 802 || || ||||||||||| || || ||| |||| |||||||| Sbjct: 57658 tctgatgttgttggggctctcaagatgagaacttatttgag 57698 Score = 60.0 bits (30), Expect = 3e-05 Identities = 81/98 (82%) Strand = Plus / Plus Query: 1104 agcacagcaacaaatgttgaaattgaggttcctgttccttcagatgccacgaacccaaat 1163 ||||| || ||||||||||| |||||| | ||||| ||| ||||| | ||| |||||| Sbjct: 58986 agcactgccacaaatgttgagattgagttgcctgtgcctgttgatgcaatgaatccaaat 59045 Query: 1164 ataagaacttcaatgggttctgctgcatatgcacctga 1201 | ||||||||||||| ||||| |||||||||||||| Sbjct: 59046 gttcgaacttcaatgggatctgcagcatatgcacctga 59083 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 465 aagcactatttcgaggaattggaggaggaatcactgagagataactttgtcgt 517 ||||| ||||| || |||||||| ||||||||||| || |||||||||||||| Sbjct: 57176 aagcattattttgaagaattggaagaggaatcacttagggataactttgtcgt 57228 Score = 54.0 bits (27), Expect = 0.002 Identities = 102/127 (80%) Strand = Plus / Plus Query: 529 tgctcgatgagatgatggattttgggtacccacaatacaccgaggcaaagatattaagcg 588 |||| ||||| || ||||| ||||| ||||| || ||||| ||||| ||||| | || | Sbjct: 57332 tgcttgatgaaattatggactttggctaccctcagtacactgaggcgaagattcttagtg 57391 Query: 589 agttcatcaagacagacgcatataagatggaggtcacacagagaccaccaatggctgtga 648 |||| |||||||| || || |||| ||||| || || |||||||| || |||||||||| Sbjct: 57392 agtttatcaagaccgatgcttatagaatggaagttacgcagagacctcccatggctgtga 57451 Query: 649 caaatgc 655 | ||||| Sbjct: 57452 ctaatgc 57458 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 408 caaaactgcaacgccgctagcatcctcctcttcctcca 445 ||||||||||| ||||||||| ||||| |||||||||| Sbjct: 57023 caaaactgcaatgccgctagcctcctcttcttcctcca 57060 Score = 44.1 bits (22), Expect = 1.7 Identities = 31/34 (91%) Strand = Plus / Plus Query: 966 gatggatcttttgatctgatgacatacaggctca 999 |||||| | |||||| |||||||||||||||||| Sbjct: 58566 gatggagcatttgatttgatgacatacaggctca 58599 Score = 44.1 bits (22), Expect = 1.7 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1323 atacgagtgaaatttgagataccgtatttcactgtatctggtattcaggt 1372 ||||| ||||||||||| ||||| ||||| ||||| ||||| || ||||| Sbjct: 59312 atacgtgtgaaatttgaaataccttattttactgtttctggaatacaggt 59361
>emb|CT985828.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 421 Score = 109 bits (55), Expect = 3e-20 Identities = 163/199 (81%) Strand = Plus / Plus Query: 1272 agtctaccaagtataactgcggaagaagcagttcctgaaaagaaggcaccgatacgagtg 1331 |||||||| |||||||| || |||||||| ||||| | ||||| || ||||| ||| Sbjct: 1 agtctacccagtataacagctgaagaagccacccctgagagaaaggcccccatacgcgtg 60 Query: 1332 aaatttgagataccgtatttcactgtatctggtattcaggttcgctatctaaagatcatt 1391 || ||||||||||| ||||||||||| ||||| || ||||| || || || ||||| ||| Sbjct: 61 aagtttgagataccatatttcactgtctctggcatacaggtgcggtacctgaagattatt 120 Query: 1392 gaaaagagtgggtaccaggcgctcccgtgggttagatacatcaccatggcaggtgaatac 1451 || ||||| || |||||||| || || ||||| ||||||||||| |||||||| || || Sbjct: 121 gagaagagcggctaccaggctcttccctgggtgagatacatcactatggcaggcgagtat 180 Query: 1452 gaactgagacttatatgag 1470 |||||||| ||||| |||| Sbjct: 181 gaactgaggcttatctgag 199
>emb|CT985386.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 428 Score = 109 bits (55), Expect = 3e-20 Identities = 163/199 (81%) Strand = Plus / Plus Query: 1272 agtctaccaagtataactgcggaagaagcagttcctgaaaagaaggcaccgatacgagtg 1331 |||||||| |||||||| || |||||||| ||||| | ||||| || ||||| ||| Sbjct: 1 agtctacccagtataacagctgaagaagccacccctgagagaaaggcccccatacgcgtg 60 Query: 1332 aaatttgagataccgtatttcactgtatctggtattcaggttcgctatctaaagatcatt 1391 || ||||||||||| ||||||||||| ||||| || ||||| || || || ||||| ||| Sbjct: 61 aagtttgagataccatatttcactgtctctggcatacaggtgcggtacctgaagattatt 120 Query: 1392 gaaaagagtgggtaccaggcgctcccgtgggttagatacatcaccatggcaggtgaatac 1451 || ||||| || |||||||| || || ||||| ||||||||||| |||||||| || || Sbjct: 121 gagaagagcggctaccaggctcttccctgggtgagatacatcactatggcaggcgagtat 180 Query: 1452 gaactgagacttatatgag 1470 |||||||| ||||| |||| Sbjct: 181 gaactgaggcttatctgag 199
>emb|CT981132.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 421 Score = 109 bits (55), Expect = 3e-20 Identities = 163/199 (81%) Strand = Plus / Plus Query: 1272 agtctaccaagtataactgcggaagaagcagttcctgaaaagaaggcaccgatacgagtg 1331 |||||||| |||||||| || |||||||| ||||| | ||||| || ||||| ||| Sbjct: 1 agtctacccagtataacagctgaagaagccacccctgagagaaaggcccccatacgcgtg 60 Query: 1332 aaatttgagataccgtatttcactgtatctggtattcaggttcgctatctaaagatcatt 1391 || ||||||||||| ||||||||||| ||||| || ||||| || || || ||||| ||| Sbjct: 61 aagtttgagataccatatttcactgtctctggcatacaggtgcggtacctgaagattatt 120 Query: 1392 gaaaagagtgggtaccaggcgctcccgtgggttagatacatcaccatggcaggtgaatac 1451 || ||||| || |||||||| || || ||||| ||||||||||| |||||||| || || Sbjct: 121 gagaagagcggctaccaggctcttccctgggtgagatacatcactatggcaggcgagtat 180 Query: 1452 gaactgagacttatatgag 1470 |||||||| ||||| |||| Sbjct: 181 gaactgaggcttatctgag 199
>emb|CT982640.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 420 Score = 101 bits (51), Expect = 8e-18 Identities = 162/199 (81%) Strand = Plus / Plus Query: 1272 agtctaccaagtataactgcggaagaagcagttcctgaaaagaaggcaccgatacgagtg 1331 |||||||| |||||||| || |||||||| ||||| | ||||| || ||||| || Sbjct: 1 agtctacccagtataacagctgaagaagccacccctgagagaaaggcccccatacgcatg 60 Query: 1332 aaatttgagataccgtatttcactgtatctggtattcaggttcgctatctaaagatcatt 1391 || ||||||||||| ||||||||||| ||||| || ||||| || || || ||||| ||| Sbjct: 61 aagtttgagataccatatttcactgtctctggcatacaggtgcggtacctgaagattatt 120 Query: 1392 gaaaagagtgggtaccaggcgctcccgtgggttagatacatcaccatggcaggtgaatac 1451 || ||||| || |||||||| || || ||||| ||||||||||| |||||||| || || Sbjct: 121 gagaagagcggctaccaggctcttccctgggtgagatacatcactatggcaggcgagtat 180 Query: 1452 gaactgagacttatatgag 1470 |||||||| ||||| |||| Sbjct: 181 gaactgaggcttatctgag 199
>gb|AC007354.3|T16B5 Arabidopsis thaliana chromosome 1 BAC T16B5 sequence, complete sequence Length = 70116 Score = 97.6 bits (49), Expect = 1e-16 Identities = 130/157 (82%) Strand = Plus / Minus Query: 521 gtatgagttgctcgatgagatgatggattttgggtacccacaatacaccgaggcaaagat 580 ||||||||| || || ||||||||||| ||||| ||||| || | || ||||||| || Sbjct: 48830 gtatgagttacttgacgagatgatggactttggttaccctcagtttactgaggcaagaat 48771 Query: 581 attaagcgagttcatcaagacagacgcatataagatggaggtcacacagagaccaccaat 640 | || || ||||||||||| || ||||||| ||||| || ||||||||||| ||||| Sbjct: 48770 ccttagtgaattcatcaagactgatgcatatagaatggaagttacacagagacctccaat 48711 Query: 641 ggctgtgacaaatgctgtctcatggaggagtgagggg 677 |||||| || ||| ||||||||||||||||||||||| Sbjct: 48710 ggctgtcactaattctgtctcatggaggagtgagggg 48674 Score = 85.7 bits (43), Expect = 5e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggcgctcccgtgggttaga 1427 |||||||| || || ||||||||||| ||||||||||||||||| | || ||||| ||| Sbjct: 47309 caggttcgatacctgaagatcattgagaagagtgggtaccaggcacatccatgggtgaga 47250 Query: 1428 tacatcaccatggcaggtgaatacgaactgagact 1462 || || |||||||| ||||| |||||||||||||| Sbjct: 47249 tatataaccatggctggtgagtacgaactgagact 47215 Score = 71.9 bits (36), Expect = 8e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 930 tttgagaatgacaggacgatatcattcatccctccagatggatcttttgatctgatgaca 989 |||||||| |||||||| ||||||||||| || || ||||||||||||||||| ||||| Sbjct: 48131 tttgagaacgacaggacaatatcattcataccacctgatggatcttttgatcttatgacg 48072 Query: 990 tacaggctcaacactcaggt 1009 || || |||| |||||||| Sbjct: 48071 tatagactcagtactcaggt 48052 Score = 50.1 bits (25), Expect = 0.028 Identities = 46/53 (86%) Strand = Plus / Minus Query: 462 ttcaagcactatttcgaggaattggaggaggaatcactgagagataactttgt 514 |||||||| || |||||||| || ||||| ||||| |||||||||||||||| Sbjct: 48999 ttcaagcattacttcgaggagttagaggaagaatctttgagagataactttgt 48947 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1004 tcaggtgaagcctcttatctgggtggaagc 1033 |||||| ||||||||||| ||||||||||| Sbjct: 47963 tcaggtaaagcctcttatatgggtggaagc 47934 Score = 42.1 bits (21), Expect = 6.8 Identities = 81/101 (80%) Strand = Plus / Minus Query: 702 ttcttggatgtagtggagagtgttaacattcttgttaatagcaatgggcagattgtgaga 761 ||||||||||| | |||||||| || || ||||| || || |||||||| ||||| || Sbjct: 48575 ttcttggatgtgatagagagtgtaaatatccttgtgaacagtaatgggcaaattgtcagg 48516 Query: 762 tcagacgttgttggggcactgaaaatgcgaacatatttgag 802 || || || ||||| || |||| ||||||||||| ||||| Sbjct: 48515 tctgatgtcgttggagctttgaagatgcgaacatacttgag 48475
>gb|AC009398.6|AC009398 Genomic sequence for Arabidopsis thaliana BAC F20B24 from chromosome I, complete sequence Length = 99416 Score = 97.6 bits (49), Expect = 1e-16 Identities = 130/157 (82%) Strand = Plus / Plus Query: 521 gtatgagttgctcgatgagatgatggattttgggtacccacaatacaccgaggcaaagat 580 ||||||||| || || ||||||||||| ||||| ||||| || | || ||||||| || Sbjct: 66361 gtatgagttacttgacgagatgatggactttggttaccctcagtttactgaggcaagaat 66420 Query: 581 attaagcgagttcatcaagacagacgcatataagatggaggtcacacagagaccaccaat 640 | || || ||||||||||| || ||||||| ||||| || ||||||||||| ||||| Sbjct: 66421 ccttagtgaattcatcaagactgatgcatatagaatggaagttacacagagacctccaat 66480 Query: 641 ggctgtgacaaatgctgtctcatggaggagtgagggg 677 |||||| || ||| ||||||||||||||||||||||| Sbjct: 66481 ggctgtcactaattctgtctcatggaggagtgagggg 66517 Score = 85.7 bits (43), Expect = 5e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggcgctcccgtgggttaga 1427 |||||||| || || ||||||||||| ||||||||||||||||| | || ||||| ||| Sbjct: 67882 caggttcgatacctgaagatcattgagaagagtgggtaccaggcacatccatgggtgaga 67941 Query: 1428 tacatcaccatggcaggtgaatacgaactgagact 1462 || || |||||||| ||||| |||||||||||||| Sbjct: 67942 tatataaccatggctggtgagtacgaactgagact 67976 Score = 71.9 bits (36), Expect = 8e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 930 tttgagaatgacaggacgatatcattcatccctccagatggatcttttgatctgatgaca 989 |||||||| |||||||| ||||||||||| || || ||||||||||||||||| ||||| Sbjct: 67060 tttgagaacgacaggacaatatcattcataccacctgatggatcttttgatcttatgacg 67119 Query: 990 tacaggctcaacactcaggt 1009 || || |||| |||||||| Sbjct: 67120 tatagactcagtactcaggt 67139 Score = 50.1 bits (25), Expect = 0.028 Identities = 46/53 (86%) Strand = Plus / Plus Query: 462 ttcaagcactatttcgaggaattggaggaggaatcactgagagataactttgt 514 |||||||| || |||||||| || ||||| ||||| |||||||||||||||| Sbjct: 66192 ttcaagcattacttcgaggagttagaggaagaatctttgagagataactttgt 66244 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1004 tcaggtgaagcctcttatctgggtggaagc 1033 |||||| ||||||||||| ||||||||||| Sbjct: 67228 tcaggtaaagcctcttatatgggtggaagc 67257 Score = 42.1 bits (21), Expect = 6.8 Identities = 81/101 (80%) Strand = Plus / Plus Query: 702 ttcttggatgtagtggagagtgttaacattcttgttaatagcaatgggcagattgtgaga 761 ||||||||||| | |||||||| || || ||||| || || |||||||| ||||| || Sbjct: 66616 ttcttggatgtgatagagagtgtaaatatccttgtgaacagtaatgggcaaattgtcagg 66675 Query: 762 tcagacgttgttggggcactgaaaatgcgaacatatttgag 802 || || || ||||| || |||| ||||||||||| ||||| Sbjct: 66676 tctgatgtcgttggagctttgaagatgcgaacatacttgag 66716
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 67.9 bits (34), Expect = 1e-07 Identities = 64/74 (86%) Strand = Plus / Minus Query: 372 cagcataacaatgtcttcctcctcaccgcctcccgccaaaactgcaacgccgctagcatc 431 ||||| ||||||||||||||||||| ||||||| |||||| ||||| |||| ||||| Sbjct: 10897792 cagcacaacaatgtcttcctcctcaacgcctcctgccaaatttgcaataccgccagcata 10897733 Query: 432 ctcctcttcctcca 445 ||| |||||||||| Sbjct: 10897732 ctcttcttcctcca 10897719 Score = 61.9 bits (31), Expect = 7e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 386 cttcctcctcaccgcctcccgccaaaactgcaacgccgc 424 |||||||||| ||||||||||||| |||||||||||||| Sbjct: 10897872 cttcctcctcgccgcctcccgccagaactgcaacgccgc 10897834 Score = 46.1 bits (23), Expect = 0.43 Identities = 32/35 (91%) Strand = Plus / Minus Query: 226 gcgtcctcgtctggcgcgacttccgcggcgacgtc 260 |||||||||||||| | |||| ||||||||||||| Sbjct: 10897963 gcgtcctcgtctggagtgactaccgcggcgacgtc 10897929
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 67.9 bits (34), Expect = 1e-07 Identities = 64/74 (86%) Strand = Plus / Minus Query: 372 cagcataacaatgtcttcctcctcaccgcctcccgccaaaactgcaacgccgctagcatc 431 ||||| ||||||||||||||||||| ||||||| |||||| ||||| |||| ||||| Sbjct: 121515 cagcacaacaatgtcttcctcctcaacgcctcctgccaaatttgcaataccgccagcata 121456 Query: 432 ctcctcttcctcca 445 ||| |||||||||| Sbjct: 121455 ctcttcttcctcca 121442 Score = 61.9 bits (31), Expect = 7e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 386 cttcctcctcaccgcctcccgccaaaactgcaacgccgc 424 |||||||||| ||||||||||||| |||||||||||||| Sbjct: 121595 cttcctcctcgccgcctcccgccagaactgcaacgccgc 121557 Score = 46.1 bits (23), Expect = 0.43 Identities = 32/35 (91%) Strand = Plus / Minus Query: 226 gcgtcctcgtctggcgcgacttccgcggcgacgtc 260 |||||||||||||| | |||| ||||||||||||| Sbjct: 121686 gcgtcctcgtctggagtgactaccgcggcgacgtc 121652
>dbj|AP005400.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0698G06 Length = 138282 Score = 67.9 bits (34), Expect = 1e-07 Identities = 64/74 (86%) Strand = Plus / Minus Query: 372 cagcataacaatgtcttcctcctcaccgcctcccgccaaaactgcaacgccgctagcatc 431 ||||| ||||||||||||||||||| ||||||| |||||| ||||| |||| ||||| Sbjct: 37497 cagcacaacaatgtcttcctcctcaacgcctcctgccaaatttgcaataccgccagcata 37438 Query: 432 ctcctcttcctcca 445 ||| |||||||||| Sbjct: 37437 ctcttcttcctcca 37424 Score = 61.9 bits (31), Expect = 7e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 386 cttcctcctcaccgcctcccgccaaaactgcaacgccgc 424 |||||||||| ||||||||||||| |||||||||||||| Sbjct: 37577 cttcctcctcgccgcctcccgccagaactgcaacgccgc 37539 Score = 46.1 bits (23), Expect = 0.43 Identities = 32/35 (91%) Strand = Plus / Minus Query: 226 gcgtcctcgtctggcgcgacttccgcggcgacgtc 260 |||||||||||||| | |||| ||||||||||||| Sbjct: 37668 gcgtcctcgtctggagtgactaccgcggcgacgtc 37634
>ref|XM_784523.2| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC584669 (LOC584669), mRNA Length = 1113 Score = 65.9 bits (33), Expect = 5e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 1335 tttgagataccgtatttcactgtatctggtattcaggttcgctatctaaagatcattgaa 1394 ||||||||||| || ||||| ||| || ||||||||||| || | ||||||||||| Sbjct: 979 tttgagataccttacttcacaacatcaggcattcaggttcggtacttgaagatcattgag 1038 Query: 1395 aagagtgggtaccaggcgctcccgtgggttagatacatcac 1435 |||||||| |||||||| || || ||||| ||||||||||| Sbjct: 1039 aagagtggttaccaggcactaccatgggtgagatacatcac 1079
>ref|XM_001177371.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC584669 (LOC584669), mRNA Length = 1113 Score = 65.9 bits (33), Expect = 5e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 1335 tttgagataccgtatttcactgtatctggtattcaggttcgctatctaaagatcattgaa 1394 ||||||||||| || ||||| ||| || ||||||||||| || | ||||||||||| Sbjct: 979 tttgagataccttacttcacaacatcaggcattcaggttcggtacttgaagatcattgag 1038 Query: 1395 aagagtgggtaccaggcgctcccgtgggttagatacatcac 1435 |||||||| |||||||| || || ||||| ||||||||||| Sbjct: 1039 aagagtggttaccaggcactaccatgggtgagatacatcac 1079
>ref|XM_001112653.1| PREDICTED: Macaca mulatta similar to adaptor-related protein complex 1, mu 1 subunit (LOC718605), mRNA Length = 2299 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggcgctcccgtgggt 1423 ||||| ||||| || ||||||||||| ||||||||||||||||| || |||||||| Sbjct: 1326 caggtgcgctacctgaagatcattgagaagagtgggtaccaggccctgccgtgggt 1381
>ref|NM_001034511.1| Bos taurus similar to Adaptor-related protein complex 1, mu 2 subunit (Mu-adaptin 2) (Adaptor protein complex AP-1 mu-2 subunit) (Golgi adaptor HA1/AP1 adaptin mu-2 subunit) (Clathrin assembly protein assembly protein complex 1 medium chain 2) (AP-mu chain fa... (MGC127475), mRNA gb|BC103358.1| Bos taurus similar to Adaptor-related protein complex 1, mu 2 subunit (Mu-adaptin 2) (Adaptor protein complex AP-1 mu-2 subunit) (Golgi adaptor HA1/AP1 adaptin mu-2 subunit) (Clathrin assembly protein assembly protein complex 1 medium chain 2) (AP-mu chai, mRNA (cDNA clone MGC:127475 IMAGE:7949401), complete cds Length = 1705 Score = 61.9 bits (31), Expect = 7e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 1329 gtgaaatttgagataccgtatttcactgtatctggtattcaggttcgctatctaaagatc 1388 ||||| |||||||| || ||||||||||| ||||| || ||||| || || | |||||| Sbjct: 1151 gtgaagtttgagatcccctatttcactgtctctgggatccaggtccgatacatgaagatc 1210 Query: 1389 attgaaaagagtgggtaccaggc 1411 ||||| |||||||| |||||||| Sbjct: 1211 attgagaagagtggttaccaggc 1233
>gb|BC003823.1| Mus musculus adaptor-related protein complex AP-1, mu subunit 1, mRNA (cDNA clone MGC:6219 IMAGE:3491338), complete cds Length = 1952 Score = 58.0 bits (29), Expect = 1e-04 Identities = 65/77 (84%) Strand = Plus / Plus Query: 1335 tttgagataccgtatttcactgtatctggtattcaggttcgctatctaaagatcattgaa 1394 |||||||| || ||||||||| ||||| || ||||| ||||| || || |||||||| Sbjct: 1182 tttgagatcccctatttcactacctctggcatccaggtgcgctacctgaaaatcattgag 1241 Query: 1395 aagagtgggtaccaggc 1411 ||||||||||||||||| Sbjct: 1242 aagagtgggtaccaggc 1258
>ref|NM_001006850.1| Xenopus tropicalis adaptor-related protein complex 1, mu 1 subunit (ap1m1), mRNA gb|BC076939.1| Xenopus tropicalis adaptor-related protein complex 1, mu 1 subunit, mRNA (cDNA clone MGC:89273 IMAGE:6977081), complete cds Length = 3062 Score = 58.0 bits (29), Expect = 1e-04 Identities = 74/89 (83%) Strand = Plus / Plus Query: 1335 tttgagataccgtatttcactgtatctggtattcaggttcgctatctaaagatcattgaa 1394 ||||| ||||| || |||||||| || || ||||||||||| || | ||||||||||| Sbjct: 1412 tttgaaataccctacttcactgtttcagggattcaggttcgatacatgaagatcattgag 1471 Query: 1395 aagagtgggtaccaggcgctcccgtgggt 1423 || ||||| ||||| || ||||||||||| Sbjct: 1472 aaaagtggataccaagccctcccgtgggt 1500 Score = 48.1 bits (24), Expect = 0.11 Identities = 45/52 (86%) Strand = Plus / Plus Query: 504 gataactttgtcgtcgtgtatgagttgctcgatgagatgatggattttgggt 555 |||||||||||| | ||||||||| |||| ||||| || ||||| ||||||| Sbjct: 587 gataactttgtcattgtgtatgagctgctggatgaaatcatggactttgggt 638
>ref|XM_001172700.1| PREDICTED: Pan troglodytes adaptor-related protein complex 1, mu 1 subunit, transcript variant 1 (AP1M1), mRNA Length = 2054 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct: 952 caggtgcgctacctgaagatcattgagaagagtgggtaccaggc 995
>ref|XM_524148.2| PREDICTED: Pan troglodytes adaptor-related protein complex 1, mu 1 subunit, transcript variant 8 (AP1M1), mRNA Length = 2383 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct: 1281 caggtgcgctacctgaagatcattgagaagagtgggtaccaggc 1324
>ref|XM_001172722.1| PREDICTED: Pan troglodytes adaptor-related protein complex 1, mu 1 subunit, transcript variant 3 (AP1M1), mRNA Length = 2552 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct: 1450 caggtgcgctacctgaagatcattgagaagagtgggtaccaggc 1493
>ref|XM_001172712.1| PREDICTED: Pan troglodytes adaptor-related protein complex 1, mu 1 subunit, transcript variant 2 (AP1M1), mRNA Length = 2442 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct: 1340 caggtgcgctacctgaagatcattgagaagagtgggtaccaggc 1383
>ref|XM_001172767.1| PREDICTED: Pan troglodytes adaptor-related protein complex 1, mu 1 subunit, transcript variant 6 (AP1M1), mRNA Length = 2309 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct: 1207 caggtgcgctacctgaagatcattgagaagagtgggtaccaggc 1250
>ref|XM_001172758.1| PREDICTED: Pan troglodytes adaptor-related protein complex 1, mu 1 subunit, transcript variant 5 (AP1M1), mRNA Length = 2474 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct: 1372 caggtgcgctacctgaagatcattgagaagagtgggtaccaggc 1415
>ref|XM_001172777.1| PREDICTED: Pan troglodytes adaptor-related protein complex 1, mu 1 subunit, transcript variant 7 (AP1M1), mRNA Length = 2468 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct: 1366 caggtgcgctacctgaagatcattgagaagagtgggtaccaggc 1409
>ref|XM_001172745.1| PREDICTED: Pan troglodytes adaptor-related protein complex 1, mu 1 subunit, transcript variant 4 (AP1M1), mRNA Length = 2409 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct: 1307 caggtgcgctacctgaagatcattgagaagagtgggtaccaggc 1350
>gb|BC077578.1| Xenopus laevis adaptor-related protein complex 1, mu 1 subunit, mRNA (cDNA clone MGC:83665 IMAGE:5085508), complete cds Length = 2163 Score = 56.0 bits (28), Expect = 4e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 504 gataactttgtcgtcgtgtatgagttgctcgatgagatgatggattttgggt 555 |||||||||||| | ||||||||| |||| |||||||| ||||| ||||||| Sbjct: 655 gataactttgtcattgtgtatgagctgctggatgagatcatggactttgggt 706
>gb|AY810336.1| Schistosoma japonicum SJCHGC09053 protein mRNA, partial cds Length = 1273 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 1329 gtgaaatttgagataccgtatttcactgtatctggt 1364 ||||||||||||||||| ||||||||||| |||||| Sbjct: 1135 gtgaaatttgagataccctatttcactgtgtctggt 1170 Score = 46.1 bits (23), Expect = 0.43 Identities = 86/107 (80%) Strand = Plus / Plus Query: 927 agatttgagaatgacaggacgatatcattcatccctccagatggatcttttgatctgatg 986 |||||||| ||||| | ||||| || || |||||||||||||| ||||| |||||| Sbjct: 736 agatttgaaaatgatcgcacgatttcttttatccctccagatggtgaatttgaactgatg 795 Query: 987 acatacaggctcaacactcaggtgaagcctcttatctgggtggaagc 1033 | ||||| || || ||||| || || |||||||||||||| ||||| Sbjct: 796 tcttacagacttaatactcatgttaaacctcttatctgggtagaagc 842
>dbj|AK027528.1| Homo sapiens cDNA FLJ14622 fis, clone NT2RP2000147, highly similar to CLATHRIN COAT ASSEMBLY PROTEIN AP47 Length = 2256 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct: 1252 caggtgcgctacctgaagatcattgagaagagtgggtaccaggc 1295
>gb|BC017469.2| Homo sapiens adaptor-related protein complex 1, mu 1 subunit, mRNA (cDNA clone MGC:10185 IMAGE:3908642), complete cds Length = 2308 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct: 1289 caggtgcgctacctgaagatcattgagaagagtgggtaccaggc 1332
>dbj|AB209808.1| Homo sapiens mRNA for adaptor-related protein complex 1, mu 1 subunit variant protein Length = 2311 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct: 1300 caggtgcgctacctgaagatcattgagaagagtgggtaccaggc 1343
>ref|NM_032493.2| Homo sapiens adaptor-related protein complex 1, mu 1 subunit (AP1M1), mRNA Length = 2297 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct: 1278 caggtgcgctacctgaagatcattgagaagagtgggtaccaggc 1321
>gb|DQ059565.1| Homo sapiens leukemia T cell specific adaptor-related protein 1 mu1 subunit mRNA, complete cds Length = 1308 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct: 1207 caggtgcgctacctgaagatcattgagaagagtgggtaccaggc 1250
>gb|AC020911.9| Homo sapiens chromosome 19 clone CTD-2562J15, complete sequence Length = 196512 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct: 114157 caggtgcgctacctgaagatcattgagaagagtgggtaccaggc 114200
>gb|AF290613.1|AF290613 Homo sapiens clone F0127 clathrin-associated protein AP47 mRNA, complete cds Length = 1751 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct: 1247 caggtgcgctacctgaagatcattgagaagagtgggtaccaggc 1290
>emb|CR623912.1| full-length cDNA clone CS0DI016YJ15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1311 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct: 339 caggtgcgctacctgaagatcattgagaagagtgggtaccaggc 382
>emb|CR613573.1| full-length cDNA clone CS0DC026YD21 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1566 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct: 588 caggtgcgctacctgaagatcattgagaagagtgggtaccaggc 631
>emb|CR760351.2| Xenopus tropicalis finished cDNA, clone TNeu104l10 Length = 1784 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Plus Query: 1329 gtgaaatttgagataccgtatttcactgtatctggtattcaggttcgctatctaaagatc 1388 ||||| ||||||||||| ||||| || ||||| ||||||||||| || | || ||| Sbjct: 1274 gtgaagtttgagataccctattttacaacttctggaattcaggttcggtacttgaaaatc 1333 Query: 1389 attgaaaagagtgggtaccaggc 1411 |||||||| |||||||||||||| Sbjct: 1334 attgaaaaaagtgggtaccaggc 1356 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Plus Query: 927 agatttgagaatgacaggacgatatcattcatccctccagatgg 970 |||||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 878 agatttgaaaatgacaggacaatttccttcattcctccagatgg 921
>ref|XM_001116045.1| PREDICTED: Macaca mulatta similar to AP-1 complex subunit mu-2 (Adaptor-related protein complex 1 mu-2 subunit) (Mu-adaptin 2) (Adaptor protein complex AP-1 mu-2 subunit) (Golgi adaptor HA1/AP1 adaptin mu-2 subunit) (Clathrin assembly protein assembly protein complex 1 medi... (LOC720531), partial mRNA Length = 492 Score = 52.0 bits (26), Expect = 0.007 Identities = 83/102 (81%) Strand = Plus / Plus Query: 1335 tttgagataccgtatttcactgtatctggtattcaggttcgctatctaaagatcattgaa 1394 |||||||| || || |||||||| ||||| || ||||| || || | ||||||||||| Sbjct: 322 tttgagatcccctacttcactgtctctgggatccaggtccgatacatgaagatcattgag 381 Query: 1395 aagagtgggtaccaggcgctcccgtgggttagatacatcacc 1436 || ||||| |||||||| || || |||||| | ||||||||| Sbjct: 382 aaaagtggttaccaggccctgccctgggttcgctacatcacc 423
>dbj|AB230160.1| Aspergillus oryzae cDNA, contig sequence: AoEST7047 Length = 536 Score = 52.0 bits (26), Expect = 0.007 Identities = 38/42 (90%) Strand = Plus / Plus Query: 522 tatgagttgctcgatgagatgatggattttgggtacccacaa 563 ||||| |||||||||||||||||||| || || ||||||||| Sbjct: 358 tatgaattgctcgatgagatgatggacttcggatacccacaa 399
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 52.0 bits (26), Expect = 0.007 Identities = 38/42 (90%) Strand = Plus / Plus Query: 522 tatgagttgctcgatgagatgatggattttgggtacccacaa 563 ||||| |||||||||||||||||||| || || ||||||||| Sbjct: 1521867 tatgaattgctcgatgagatgatggacttcggatacccacaa 1521908
>dbj|AK148173.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370040P14 product:adaptor-related protein complex AP-1, mu subunit 1, full insert sequence Length = 1985 Score = 50.1 bits (25), Expect = 0.028 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1359 tctggtattcaggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| || ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 1247 tctggcatccaggtgcgctacctgaaaatcattgagaagagtgggtaccaggc 1299
>ref|NM_007456.1| Mus musculus adaptor-related protein complex AP-1, mu subunit 1 (Ap1m1), mRNA gb|M62419.1|MUSAP47A Mouse clathrin-associated protein (AP47) mRNA, complete cds Length = 1966 Score = 50.1 bits (25), Expect = 0.028 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1359 tctggtattcaggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| || ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 1234 tctggcatccaggtgcgctacctgaaaatcattgagaagagtgggtaccaggc 1286
>ref|XM_001215660.1| Aspergillus terreus NIH2624 AP-1 complex subunit mu-1 (ATEG_06482) mRNA, complete cds Length = 1302 Score = 48.1 bits (24), Expect = 0.11 Identities = 33/36 (91%) Strand = Plus / Plus Query: 528 ttgctcgatgagatgatggattttgggtacccacaa 563 |||||||| || |||||||| ||||||||||||||| Sbjct: 337 ttgctcgacgaaatgatggactttgggtacccacaa 372
>dbj|AK228929.1| Arabidopsis thaliana mRNA for putative Clathrin Coat Assembly protein, complete cds, clone: RAFL16-24-F16 Length = 566 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Plus Query: 198 gcgctgttcctgctggacatcaagggccgcgtcctcgtctggcg 241 |||||||| ||||| || |||||||| ||||| ||||||||||| Sbjct: 294 gcgctgtttctgcttgatatcaagggacgcgttctcgtctggcg 337
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 48.1 bits (24), Expect = 0.11 Identities = 27/28 (96%) Strand = Plus / Minus Query: 182 ggcgggcgcggtgtcggcgctgttcctg 209 ||||||||||||| |||||||||||||| Sbjct: 884804 ggcgggcgcggtgacggcgctgttcctg 884777
>ref|NM_203702.1| Xenopus tropicalis hypothetical protein MGC75970 (MGC75970), mRNA gb|BC061393.1| Xenopus tropicalis hypothetical protein MGC75970, mRNA (cDNA clone MGC:75970 IMAGE:5384222), complete cds Length = 1835 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Plus Query: 927 agatttgagaatgacaggacgatatcattcatccctccagatgg 970 |||||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 969 agatttgaaaatgacaggacaatttccttcattcctccagatgg 1012 Score = 46.1 bits (23), Expect = 0.43 Identities = 68/83 (81%) Strand = Plus / Plus Query: 1329 gtgaaatttgagataccgtatttcactgtatctggtattcaggttcgctatctaaagatc 1388 ||||| ||||||||||| ||||| || ||||| ||||||||| | || | || ||| Sbjct: 1365 gtgaagtttgagataccctattttacaacttctggaattcaggttaggtacttgaaaatc 1424 Query: 1389 attgaaaagagtgggtaccaggc 1411 |||||||| |||||||||||||| Sbjct: 1425 attgaaaaaagtgggtaccaggc 1447
>gb|AC158898.7| Mus musculus chromosome 8, clone RP23-153P23, complete sequence Length = 212598 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Minus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 3863 caggtgcgctacctgaaaatcattgagaagagtgggtaccaggc 3820
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Minus Query: 190 cggtgtcggcgctgttcctgctgg 213 |||||||||||||||||||||||| Sbjct: 7605049 cggtgtcggcgctgttcctgctgg 7605026 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Minus Query: 190 cggtgtcggcgctgttcctgctgg 213 |||||||||||||||||||||||| Sbjct: 7648752 cggtgtcggcgctgttcctgctgg 7648729
>gb|AF139404.1|F139394S11 Mus musculus clathrin-associated adaptor medium chain mu 1A (Ap1m1) gene, exon 11 Length = 96 Score = 48.1 bits (24), Expect = 0.11 Identities = 39/44 (88%) Strand = Plus / Plus Query: 1368 caggttcgctatctaaagatcattgaaaagagtgggtaccaggc 1411 ||||| ||||| || || |||||||| ||||||||||||||||| Sbjct: 8 caggtgcgctacctgaaaatcattgagaagagtgggtaccaggc 51
>gb|L24432.1|RHBHGC Bradyrhizobium japonicum hydrogenase gene cluster (hupN) gene, complete cds Length = 4532 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Plus Query: 190 cggtgtcggcgctgttcctgctgg 213 |||||||||||||||||||||||| Sbjct: 1358 cggtgtcggcgctgttcctgctgg 1381
>emb|AM260480.1| Ralstonia eutropha H16 chromosome 2 Length = 2912490 Score = 46.1 bits (23), Expect = 0.43 Identities = 26/27 (96%) Strand = Plus / Minus Query: 187 gcgcggtgtcggcgctgttcctgctgg 213 |||||||| |||||||||||||||||| Sbjct: 1960987 gcgcggtgccggcgctgttcctgctgg 1960961
>ref|XM_001116049.1| PREDICTED: Macaca mulatta similar to AP-1 complex subunit mu-2 (Adaptor-related protein complex 1 mu-2 subunit) (Mu-adaptin 2) (Adaptor protein complex AP-1 mu-2 subunit) (Golgi adaptor HA1/AP1 adaptin mu-2 subunit) (Clathrin assembly protein assembly protein complex 1 medi... (LOC720533), partial mRNA Length = 406 Score = 46.1 bits (23), Expect = 0.43 Identities = 41/47 (87%) Strand = Plus / Plus Query: 507 aactttgtcgtcgtgtatgagttgctcgatgagatgatggattttgg 553 ||||||||| |||| ||||||||||| |||||| | ||||| ||||| Sbjct: 49 aactttgtcatcgtctatgagttgctggatgagctcatggactttgg 95
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 191 ggtgtcggcgctgttcctgctgg 213 ||||||||||||||||||||||| Sbjct: 128141 ggtgtcggcgctgttcctgctgg 128163
>gb|BC072376.1| Xenopus laevis cDNA clone IMAGE:4173701 Length = 1765 Score = 46.1 bits (23), Expect = 0.43 Identities = 68/83 (81%) Strand = Plus / Plus Query: 1329 gtgaaatttgagataccgtatttcactgtatctggtattcaggttcgctatctaaagatc 1388 ||||| |||||||| |||||||| || ||||| ||||||||||| || | || ||| Sbjct: 1279 gtgaagtttgagattccgtattttacaacctctggaattcaggttcgatacttgaaaatc 1338 Query: 1389 attgaaaagagtgggtaccaggc 1411 ||||| || |||||||||||||| Sbjct: 1339 attgagaaaagtgggtaccaggc 1361
>gb|BC097533.1| Xenopus laevis hypothetical protein MGC114659, mRNA (cDNA clone MGC:114659 IMAGE:5512051), complete cds Length = 1704 Score = 46.1 bits (23), Expect = 0.43 Identities = 68/83 (81%) Strand = Plus / Plus Query: 1329 gtgaaatttgagataccgtatttcactgtatctggtattcaggttcgctatctaaagatc 1388 ||||| |||||||| |||||||| || ||||| ||||||||||| || | || ||| Sbjct: 1227 gtgaagtttgagattccgtattttacaacctctggaattcaggttcgatacttgaaaatc 1286 Query: 1389 attgaaaagagtgggtaccaggc 1411 ||||| || |||||||||||||| Sbjct: 1287 attgagaaaagtgggtaccaggc 1309
>ref|NM_001007886.1| Gallus gallus adaptor-related protein complex 1, mu 1 subunit (AP1M1), mRNA emb|AJ719417.1| Gallus gallus mRNA for hypothetical protein, clone 2b13 Length = 3196 Score = 46.1 bits (23), Expect = 0.43 Identities = 50/59 (84%) Strand = Plus / Plus Query: 1039 ttgaaaaacattcaagaagccggatagaattcatgattaaggcaagaagtcagtttaag 1097 ||||||||||||| ||||| || |||| |||||| ||||||| ||||||||||||| Sbjct: 891 ttgaaaaacattcccacagccgcatcgaatacatgatcaaggcaaaaagtcagtttaag 949
>emb|BX935874.2| Gallus gallus finished cDNA, clone ChEST161b14 Length = 2253 Score = 46.1 bits (23), Expect = 0.43 Identities = 50/59 (84%) Strand = Plus / Plus Query: 1039 ttgaaaaacattcaagaagccggatagaattcatgattaaggcaagaagtcagtttaag 1097 ||||||||||||| ||||| || |||| |||||| ||||||| ||||||||||||| Sbjct: 874 ttgaaaaacattcccacagccgcatcgaatacatgatcaaggcaaaaagtcagtttaag 932
>gb|AC132286.3| Mus musculus BAC clone RP24-299C19 from 1, complete sequence Length = 192877 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1106 cacagcaacaaatgttgaaattg 1128 ||||||||||||||||||||||| Sbjct: 136112 cacagcaacaaatgttgaaattg 136134
>ref|NM_005498.3| Homo sapiens adaptor-related protein complex 1, mu 2 subunit (AP1M2), mRNA Length = 1749 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1383 aagatcattgaaaagagtgggtaccaggcgctcccgtgggttagatacatcacc 1436 ||||||||||| || ||||| |||||||| || || |||||| | ||||||||| Sbjct: 1270 aagatcattgagaaaagtggttaccaggccctgccctgggttcgctacatcacc 1323
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 430 tcctcctcttcctccaccgcgt 451 |||||||||||||||||||||| Sbjct: 3277595 tcctcctcttcctccaccgcgt 3277616
>ref|XM_512375.2| PREDICTED: Pan troglodytes adaptor-related protein complex 1, mu 2 subunit, transcript variant 3 (AP1M2), mRNA Length = 1393 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1383 aagatcattgaaaagagtgggtaccaggcgctcccgtgggttagatacatcacc 1436 ||||||||||| || ||||| |||||||| || || |||||| | ||||||||| Sbjct: 1271 aagatcattgagaaaagtggttaccaggccctgccctgggttcgctacatcacc 1324
>ref|XM_001165482.1| PREDICTED: Pan troglodytes adaptor-related protein complex 1, mu 2 subunit, transcript variant 2 (AP1M2), mRNA Length = 1761 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1383 aagatcattgaaaagagtgggtaccaggcgctcccgtgggttagatacatcacc 1436 ||||||||||| || ||||| |||||||| || || |||||| | ||||||||| Sbjct: 1271 aagatcattgagaaaagtggttaccaggccctgccctgggttcgctacatcacc 1324
>ref|XM_001165453.1| PREDICTED: Pan troglodytes adaptor-related protein complex 1, mu 2 subunit, transcript variant 1 (AP1M2), mRNA Length = 1559 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1383 aagatcattgaaaagagtgggtaccaggcgctcccgtgggttagatacatcacc 1436 ||||||||||| || ||||| |||||||| || || |||||| | ||||||||| Sbjct: 1271 aagatcattgagaaaagtggttaccaggccctgccctgggttcgctacatcacc 1324
>gb|AC184098.2| Populus trichocarpa clone Pop1-90I7, complete sequence Length = 93295 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1505 ccaatgaagctgtgaggctttt 1526 |||||||||||||||||||||| Sbjct: 67433 ccaatgaagctgtgaggctttt 67454
>ref|XM_391939.3| PREDICTED: Apis mellifera similar to AP-47 CG9388-PA (LOC408391), mRNA Length = 1269 Score = 44.1 bits (22), Expect = 1.7 Identities = 85/106 (80%) Strand = Plus / Plus Query: 1318 caccgatacgagtgaaatttgagataccgtatttcactgtatctggtattcaggttcgct 1377 ||||||| | ||| |||||||| || || ||||||||| ||||| || || || || | Sbjct: 1118 caccgattcaagttaaatttgaaattccatatttcactacttctgggatacaagtgcgtt 1177 Query: 1378 atctaaagatcattgaaaagagtgggtaccaggcgctcccgtgggt 1423 || ||||||||||||| || ||||| ||||| ||||| || ||||| Sbjct: 1178 atttaaagatcattgagaaaagtggataccaagcgctaccatgggt 1223
>ref|NW_001091929.1| Theileria annulata strain Ankara clone C9 Length = 2592520 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1416 ccgtgggttagatacatcacca 1437 |||||||||||||||||||||| Sbjct: 1104174 ccgtgggttagatacatcacca 1104153
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 430 tcctcctcttcctccaccgcgt 451 |||||||||||||||||||||| Sbjct: 2365799 tcctcctcttcctccaccgcgt 2365778
>ref|NM_001044239.1| Rattus norvegicus adaptor-related protein complex AP-1, mu subunit 1 (Ap1m1), mRNA gb|BC107903.1| Rattus norvegicus adaptor-related protein complex AP-1, mu subunit 1, mRNA (cDNA clone MGC:125095 IMAGE:7455976), complete cds Length = 1955 Score = 44.1 bits (22), Expect = 1.7 Identities = 61/74 (82%) Strand = Plus / Plus Query: 1338 gagataccgtatttcactgtatctggtattcaggttcgctatctaaagatcattgaaaag 1397 ||||| || ||||||||| ||||| || ||||| ||||| || || |||||||| ||| Sbjct: 1212 gagatcccctatttcactacctctggcatccaggtgcgctacctgaaaatcattgagaag 1271 Query: 1398 agtgggtaccaggc 1411 || ||||||||||| Sbjct: 1272 agcgggtaccaggc 1285
>gb|BC003387.2| Homo sapiens adaptor-related protein complex 1, mu 2 subunit, mRNA (cDNA clone MGC:5039 IMAGE:3446133), complete cds Length = 1709 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1383 aagatcattgaaaagagtgggtaccaggcgctcccgtgggttagatacatcacc 1436 ||||||||||| || ||||| |||||||| || || |||||| | ||||||||| Sbjct: 1208 aagatcattgagaaaagtggttaccaggccctgccctgggttcgctacatcacc 1261
>gb|BC005021.1| Homo sapiens adaptor-related protein complex 1, mu 2 subunit, mRNA (cDNA clone MGC:12546 IMAGE:3139433), complete cds Length = 1810 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1383 aagatcattgaaaagagtgggtaccaggcgctcccgtgggttagatacatcacc 1436 ||||||||||| || ||||| |||||||| || || |||||| | ||||||||| Sbjct: 1276 aagatcattgagaaaagtggttaccaggccctgccctgggttcgctacatcacc 1329
>gb|BC003612.2| Homo sapiens adaptor-related protein complex 1, mu 2 subunit, mRNA (cDNA clone MGC:1441 IMAGE:2988458), complete cds Length = 1707 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1383 aagatcattgaaaagagtgggtaccaggcgctcccgtgggttagatacatcacc 1436 ||||||||||| || ||||| |||||||| || || |||||| | ||||||||| Sbjct: 1207 aagatcattgagaaaagtggttaccaggccctgccctgggttcgctacatcacc 1260
>dbj|AK023863.1| Homo sapiens cDNA FLJ13801 fis, clone THYRO1000173, highly similar to Homo sapiens AP-mu chain family member mu1B (HSMU1B) mRNA Length = 1751 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1383 aagatcattgaaaagagtgggtaccaggcgctcccgtgggttagatacatcacc 1436 ||||||||||| || ||||| |||||||| || || |||||| | ||||||||| Sbjct: 1271 aagatcattgagaaaagtggttaccaggccctgccctgggttcgctacatcacc 1324
>emb|BX649497.23| Zebrafish DNA sequence from clone DKEYP-15A6 in linkage group 22, complete sequence Length = 106459 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1726 atcataactgatttattattat 1747 |||||||||||||||||||||| Sbjct: 20369 atcataactgatttattattat 20348
>gb|AC011475.6| Homo sapiens chromosome 19 clone CTC-539A10, complete sequence Length = 179953 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1383 aagatcattgaaaagagtgggtaccaggcgctcccgtgggttagatacatcacc 1436 ||||||||||| || ||||| |||||||| || || |||||| | ||||||||| Sbjct: 153446 aagatcattgagaaaagtggttaccaggccctgccctgggttcgctacatcacc 153499
>emb|BX004879.21| Zebrafish DNA sequence from clone CH211-157L7 in linkage group 22, complete sequence Length = 195947 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1726 atcataactgatttattattat 1747 |||||||||||||||||||||| Sbjct: 192396 atcataactgatttattattat 192417
>dbj|AK222946.1| Homo sapiens mRNA for adaptor-related protein complex 1, mu 2 subunit variant, clone: HRC09763 Length = 1616 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1383 aagatcattgaaaagagtgggtaccaggcgctcccgtgggttagatacatcacc 1436 ||||||||||| || ||||| |||||||| || || |||||| | ||||||||| Sbjct: 1236 aagatcattgagaaaagtggttaccaggccctgccctgggttcgctacatcacc 1289
>emb|CR615885.1| full-length cDNA clone CS0DI067YN09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1647 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1383 aagatcattgaaaagagtgggtaccaggcgctcccgtgggttagatacatcacc 1436 ||||||||||| || ||||| |||||||| || || |||||| | ||||||||| Sbjct: 1195 aagatcattgagaaaagtggttaccaggccctgccctgggttcgctacatcacc 1248
>emb|CR596228.1| full-length cDNA clone CS0DI036YB05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1638 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1383 aagatcattgaaaagagtgggtaccaggcgctcccgtgggttagatacatcacc 1436 ||||||||||| || ||||| |||||||| || || |||||| | ||||||||| Sbjct: 1186 aagatcattgagaaaagtggttaccaggccctgccctgggttcgctacatcacc 1239
>gb|AY117037.1| Toxoplasma gondii mu1 adaptin (mu1) mRNA, complete cds Length = 1644 Score = 44.1 bits (22), Expect = 1.7 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1386 atcattgaaaagagtgggtaccaggcgctcccgtgggttagatacatcac 1435 ||||| ||||| ||||| ||||| || || |||||||| ||||||||||| Sbjct: 1434 atcatcgaaaaaagtggataccaagctcttccgtgggtcagatacatcac 1483
>dbj|AP003369.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1102E12 Length = 155692 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 tcccaccgcgcttcgcgccgat 181 |||||||||||||||||||||| Sbjct: 143118 tcccaccgcgcttcgcgccgat 143139
>dbj|BS000224.1| Pan troglodytes chromosome 22 clone:PTB-030G10, map 22, complete sequences Length = 155241 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1211 gatggtctggaaaataaaatcatttc 1236 |||||| ||||||||||||||||||| Sbjct: 69082 gatggtatggaaaataaaatcatttc 69057
>gb|AF020797.2|AF020797 Homo sapiens AP-mu chain family member mu1B (HSMU1B) mRNA, complete cds Length = 1711 Score = 44.1 bits (22), Expect = 1.7 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1383 aagatcattgaaaagagtgggtaccaggcgctcccgtgggttagatacatcacc 1436 ||||||||||| || ||||| |||||||| || || |||||| | ||||||||| Sbjct: 1233 aagatcattgagaaaagtggttaccaggccctgccctgggttcgctacatcacc 1286
>ref|XM_948975.1| Theileria annulata strain Ankara clathrin-adaptor chain (TA06310) partial mRNA Length = 1305 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1416 ccgtgggttagatacatcacca 1437 |||||||||||||||||||||| Sbjct: 1252 ccgtgggttagatacatcacca 1273
>ref|XM_001030223.1| Tetrahymena thermophila SB210 Adaptor complexes medium subunit family protein (TTHERM_01108620) mRNA, complete cds Length = 1335 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 684 tacaaaaagaatgaagtgttcttggatgt 712 ||||||||||||||||| || |||||||| Sbjct: 547 tacaaaaagaatgaagtctttttggatgt 575
>dbj|AK236737.1| Sus scrofa mRNA, clone:OVRM10222E11, expressed in ovary Length = 1951 Score = 42.1 bits (21), Expect = 6.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 799 tgagtgggatgcccgagtgcaaacttgggttgaatgacaag 839 ||||||| ||||| |||||||| ||||| ||||||||||| Sbjct: 768 tgagtggcatgcctgagtgcaagtttgggatgaatgacaag 808
>dbj|AK235168.1| Sus scrofa mRNA, clone:OVRM10054G10, expressed in ovary Length = 2933 Score = 42.1 bits (21), Expect = 6.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 799 tgagtgggatgcccgagtgcaaacttgggttgaatgacaag 839 ||||||| ||||| |||||||| ||||| ||||||||||| Sbjct: 642 tgagtggcatgcctgagtgcaagtttgggatgaatgacaag 682
>ref|XM_001144024.1| PREDICTED: Pan troglodytes similar to Chain M, Ap2 Clathrin Adaptor Core, transcript variant 9 (LOC736431), mRNA Length = 2265 Score = 42.1 bits (21), Expect = 6.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 799 tgagtgggatgcccgagtgcaaacttgggttgaatgacaaggttctttt 847 ||||||| ||||| || ||||| ||||| ||||||||||| ||||||| Sbjct: 925 tgagtggcatgcctgaatgcaagtttgggatgaatgacaagattctttt 973
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 cgctgttcctgctggacatca 219 ||||||||||||||||||||| Sbjct: 4619630 cgctgttcctgctggacatca 4619610
>gb|CP000390.1| Mesorhizobium sp. BNC1, complete genome Length = 4412446 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 gccgatggcgggcgcggtgtcggcg 200 ||||||||||||||||||| ||||| Sbjct: 2801112 gccgatggcgggcgcggtgacggcg 2801136
>ref|XM_001102323.1| PREDICTED: Macaca mulatta similar to adaptor-related protein complex 2, mu 1 subunit, transcript variant 8 (LOC703554), mRNA Length = 2082 Score = 42.1 bits (21), Expect = 6.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 799 tgagtgggatgcccgagtgcaaacttgggttgaatgacaaggttctttt 847 ||||||| ||||| || ||||| ||||| ||||||||||| ||||||| Sbjct: 925 tgagtggcatgcctgaatgcaagtttgggatgaatgacaagattctttt 973
>ref|XM_631160.1| Dictyostelium discoideum AX4 clathrin-adaptor medium chain apm1 (apm1) mRNA, complete cds Length = 1287 Score = 42.1 bits (21), Expect = 6.8 Identities = 51/61 (83%) Strand = Plus / Plus Query: 504 gataactttgtcgtcgtgtatgagttgctcgatgagatgatggattttgggtacccacaa 563 ||||||||||| || | ||||| ||| | ||||| |||||||||||||| || |||||| Sbjct: 310 gataactttgtagtaatttatgaattgatggatgaaatgatggattttggatatccacaa 369 Query: 564 t 564 | Sbjct: 370 t 370
>gb|AC113104.15| Mus musculus chromosome 18, clone RP23-321L15, complete sequence Length = 207418 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 21 actccccacgatccccgcaccccgacccc 49 ||||||||||| ||||||||||| ||||| Sbjct: 11417 actccccacgacccccgcacccccacccc 11445
>gb|AY596538.1| Saccharum officinarum clone SCCCRZ2C04A03, complete sequence Length = 1227 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 gcgggcgcggtgtcggcgctg 203 ||||||||||||||||||||| Sbjct: 283 gcgggcgcggtgtcggcgctg 303
>gb|AC146238.2| Pan troglodytes BAC clone CH251-170A15 from Y, complete sequence Length = 169552 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1731 aactgatttattattattttt 1751 ||||||||||||||||||||| Sbjct: 68465 aactgatttattattattttt 68485
>gb|AY274927.1| Mus musculus mitogenic Ets transcriptional suppressor METS (Etv3) gene, complete cds Length = 15920 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1514 ctgtgaggcttttggaataca 1534 ||||||||||||||||||||| Sbjct: 9538 ctgtgaggcttttggaataca 9518
>gb|AC158975.9| Mus musculus chromosome 18, clone RP24-192J22, complete sequence Length = 178651 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 21 actccccacgatccccgcaccccgacccc 49 ||||||||||| ||||||||||| ||||| Sbjct: 23192 actccccacgacccccgcacccccacccc 23164
>ref|NM_199707.1| Danio rerio elongation factor RNA polymerase II (ell), mRNA gb|BC058072.1| Danio rerio elongation factor RNA polymerase II, mRNA (cDNA clone MGC:63836 IMAGE:3817105), complete cds Length = 3883 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1731 aactgatttattattattttt 1751 ||||||||||||||||||||| Sbjct: 2078 aactgatttattattattttt 2098
>gb|AC110990.3| Homo sapiens 3 BAC RP11-17A18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 55000 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1708 ttttgccttttaacttgtatc 1728 ||||||||||||||||||||| Sbjct: 32319 ttttgccttttaacttgtatc 32339
>gb|AC009811.14| Homo sapiens chromosome 3, clone RP11-491K7, complete sequence Length = 171083 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1708 ttttgccttttaacttgtatc 1728 ||||||||||||||||||||| Sbjct: 6455 ttttgccttttaacttgtatc 6435
>gb|AC022784.7| Homo sapiens chromosome 8, clone RP11-10A14, complete sequence Length = 187253 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1301 agttcctgaaaagaaggcacc 1321 ||||||||||||||||||||| Sbjct: 171429 agttcctgaaaagaaggcacc 171409
>ref|XM_696993.1| PREDICTED: Danio rerio hypothetical protein LOC554546 (LOC554546), mRNA Length = 3871 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1731 aactgatttattattattttt 1751 ||||||||||||||||||||| Sbjct: 2079 aactgatttattattattttt 2099
>gb|AC153361.5| Mus musculus BAC clone RP23-291L20 from chromosome 10, complete sequence Length = 212761 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1223 aataaaatcatttcctggtgg 1243 ||||||||||||||||||||| Sbjct: 40616 aataaaatcatttcctggtgg 40636
>emb|AL772289.10| Zebrafish DNA sequence from clone CH211-8A9 in linkage group 13, complete sequence Length = 168459 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1728 cataactgatttattattatt 1748 ||||||||||||||||||||| Sbjct: 13599 cataactgatttattattatt 13579
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 211 tggacatcaagggccgcgtcctcgt 235 |||||||||||||||||| |||||| Sbjct: 135768 tggacatcaagggccgcgacctcgt 135744 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 211 tggacatcaagggccgcgtcctcgt 235 |||||||||||||||||| |||||| Sbjct: 136934 tggacatcaagggccgcgacctcgt 136910 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 260 caccgccatccaggccgagcgcttc 284 ||||||||||||||||||| ||||| Sbjct: 3618791 caccgccatccaggccgagggcttc 3618767
>emb|AJ012328.1|LMO012328 Listeria monocytogenes antigen operon, genes maY, maX, maD, maC, maB, maA and gene encoding hypothetical protein Length = 3987 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1693 gaaagaaaaataccgttttgc 1713 ||||||||||||||||||||| Sbjct: 2346 gaaagaaaaataccgttttgc 2366
>gb|AY007278.1| Dictyostelium discoideum clathrin-adaptor medium chain apm 1 mRNA, complete cds Length = 1287 Score = 42.1 bits (21), Expect = 6.8 Identities = 51/61 (83%) Strand = Plus / Plus Query: 504 gataactttgtcgtcgtgtatgagttgctcgatgagatgatggattttgggtacccacaa 563 ||||||||||| || | ||||| ||| | ||||| |||||||||||||| || |||||| Sbjct: 310 gataactttgtagtaatttatgaattgatggatgaaatgatggattttggatatccacaa 369 Query: 564 t 564 | Sbjct: 370 t 370
>gb|AC092680.2| Homo sapiens BAC clone RP11-694B12 from 2, complete sequence Length = 200028 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 ggaggaggaatcactgagaga 505 ||||||||||||||||||||| Sbjct: 12797 ggaggaggaatcactgagaga 12777
>dbj|BS000585.1| Pan troglodytes chromosome Y clone:PTB-582H02, complete sequence Length = 140513 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1731 aactgatttattattattttt 1751 ||||||||||||||||||||| Sbjct: 106546 aactgatttattattattttt 106566
>gb|S78456.1| {pseudogene} p53 {internal fragment} [rats, IEC18 small intestinal epiothelial cells, Genomic, 323 nt] Length = 323 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1012 agcctcttatctgggtggaag 1032 ||||||||||||||||||||| Sbjct: 53 agcctcttatctgggtggaag 73
>emb|Y09161.1|LMLMA L.monocytogenes lmaD, lmaC, lmaB & lmaA genes Length = 3027 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1693 gaaagaaaaataccgttttgc 1713 ||||||||||||||||||||| Sbjct: 1386 gaaagaaaaataccgttttgc 1406
>emb|AL163246.2|HS21C046 Homo sapiens chromosome 21 segment HS21C046 Length = 340000 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1211 gatggtctggaaaataaaatcattt 1235 |||||| |||||||||||||||||| Sbjct: 225045 gatggtatggaaaataaaatcattt 225021
>ref|XM_675348.1| Plasmodium berghei strain ANKA DNAJ protein (PB001261.02.0), partial mRNA Length = 1848 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1737 tttattattatttttggtgcc 1757 ||||||||||||||||||||| Sbjct: 102 tttattattatttttggtgcc 82
>emb|AL773593.10| Zebrafish DNA sequence from clone CH211-202N20 in linkage group 5, complete sequence Length = 202726 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1731 aactgatttattattattttt 1751 ||||||||||||||||||||| Sbjct: 184540 aactgatttattattattttt 184560
>gb|AC139241.4| Mus musculus BAC clone RP24-79L4 from 3, complete sequence Length = 200361 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1514 ctgtgaggcttttggaataca 1534 ||||||||||||||||||||| Sbjct: 162535 ctgtgaggcttttggaataca 162555
>emb|AL591973.1| Listeria monocytogenes strain EGD, complete genome, segment 1/12 Length = 200050 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1693 gaaagaaaaataccgttttgc 1713 ||||||||||||||||||||| Sbjct: 122959 gaaagaaaaataccgttttgc 122979
>gb|AC138459.3| Mus musculus BAC clone RP23-335K20 from 10, complete sequence Length = 222461 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1223 aataaaatcatttcctggtgg 1243 ||||||||||||||||||||| Sbjct: 94607 aataaaatcatttcctggtgg 94587
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1693 gaaagaaaaataccgttttgc 1713 ||||||||||||||||||||| Sbjct: 134716 gaaagaaaaataccgttttgc 134736
>gb|DQ219841.1| Tetrahymena thermophila Apm1Ap (APM1A) gene, complete cds Length = 2187 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 684 tacaaaaagaatgaagtgttcttggatgt 712 ||||||||||||||||| || |||||||| Sbjct: 643 tacaaaaagaatgaagtctttttggatgt 671
>emb|AL035610.3| Homo sapiens chromosome 21 PAC LLNLP704M17648Q13, complete sequence Length = 154894 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1211 gatggtctggaaaataaaatcattt 1235 |||||| |||||||||||||||||| Sbjct: 73733 gatggtatggaaaataaaatcattt 73709
>gb|U07020.1|RNU07020 Rattus norvegicus Wistar clone pR53P2 p53 pseudogene Length = 1186 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1012 agcctcttatctgggtggaag 1032 ||||||||||||||||||||| Sbjct: 591 agcctcttatctgggtggaag 611 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 329,725,571 Number of extensions: 20039420 Number of successful extensions: 550730 Number of sequences better than 10.0: 136 Number of HSP's gapped: 550712 Number of HSP's successfully gapped: 250 Length of query: 1770 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1747 Effective length of database: 18,503,978,556 Effective search space: 32326450537332 Effective search space used: 32326450537332 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
