ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf34p06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK099645:Os01g0164600 | 281 | e-118 | 2 | AK103140:Os03g0809300 | 72 | 3e-19 | 3 | AK100049:Os10g0370000 | 62 | 9e-17 | 4 | AK071987:Os10g0370000 | 62 | 9e-17 | 5 | AY603974:Os03g0192500 | 52 | 4e-15 | 6 | AK068957:Os03g0192500 | 52 | 4e-15 | 7 | AK107359: | 44 | 1e-07 | 8 | AK111342:Os09g0449500 | 31 | 1.5 | 9 | Os01g0113700:Os01g0113700 | 31 | 2.0 | 10 | AK108220:Os02g0452700 | 30 | 4.5 | 11 | Os01g0114400:Os01g0114400 | 29 | 5.9 | 12 | AK109979: | 29 | 5.9 | 13 | Os02g0157700:Os02g0157700 | 29 | 5.9 | 14 | AK099995:Os04g0478000 | 29 | 5.9 | 15 | AK067868:Os08g0176100 | 29 | 7.7 |
|---|
>AK099645:Os01g0164600 | Length = 331 Score = 281 bits (720), Expect(2) = e-118 Identities = 145/192 (75%), Positives = 160/192 (83%), Gaps = 4/192 (2%) Frame = +1 Query: 97 AASTASRLSPPRLHA----APNHPLRRSRFSPLRAAKLEAVLSIGTHVIPHPRKVETXXX 264 A+STA+RLSPPRLHA +P+ PLRRSRFSPLRAAKLEAVL+IGTH+IPHPRK ET Sbjct: 3 ASSTATRLSPPRLHAPTTPSPHLPLRRSRFSPLRAAKLEAVLTIGTHLIPHPRKAETGGE 62 Query: 265 XXXXXXXXXXXXXXXXXXXSGWAEKNVNPALFSRELMANSSTFIKDEEVSQDPQILLMKA 444 SGWAEK+VNPALFSRELMA++STF+KDEEV+ DPQ+LLMKA Sbjct: 63 DAFFVNGDDGGVFAVADGVSGWAEKDVNPALFSRELMAHTSTFLKDEEVNHDPQLLLMKA 122 Query: 445 HAATSSIGSATVIVAMLEKTGTLKIASVGDCGLKVIRKGQVMFSTCPQEHYFDCPYQLSS 624 HAAT+S+GSATVI+AMLEKTG LKIASVGDCGLKVIRKGQVMFSTCPQEHYFDCPYQLSS Sbjct: 123 HAATTSVGSATVIIAMLEKTGILKIASVGDCGLKVIRKGQVMFSTCPQEHYFDCPYQLSS 182 Query: 625 EAIGQTSQDALV 660 EAIGQT DALV Sbjct: 183 EAIGQTYLDALV 194 Score = 163 bits (412), Expect(2) = e-118 Identities = 89/134 (66%), Positives = 97/134 (72%), Gaps = 1/134 (0%) Frame = +2 Query: 662 CTVNLMEGDMIVSGSDGFFDNIFDQEILAVINESPGTDXXXXXXXXXXXXHSVDVTFDSP 841 CTVNLMEGDMIVSGSDGFFDNIFDQEI++VI+ESPG D HSVDVTFDSP Sbjct: 195 CTVNLMEGDMIVSGSDGFFDNIFDQEIVSVISESPGVDEAAKALAELARKHSVDVTFDSP 254 Query: 842 YSMEARSRGFDVPWWXXXXXXXXXXXXMDDITVIVAQVKTVVIPDDEGSGIELEK-VGGE 1018 YSMEARSRGFDVP W MDDITVIVAQVK V+IPDDE G++ EK G E Sbjct: 255 YSMEARSRGFDVPSWKKFIGGKLIGGKMDDITVIVAQVKAVMIPDDE--GVDEEKGQGDE 312 Query: 1019 QLAAAGVASAEQSE 1060 Q +A VAS+EQ E Sbjct: 313 QGSAVAVASSEQKE 326
>AK103140:Os03g0809300 | Length = 479 Score = 72.4 bits (176), Expect(2) = 3e-19 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 1/151 (0%) Frame = +1 Query: 217 GTHVIPHPRKVETXXXXXXXXXXXXXXXXXXXXXXSGWAEKNVNPALFSRELMANSSTFI 396 G+ +PHP K E GWA+ V+ L+++ELM+NS + I Sbjct: 236 GSCYLPHPAK-EATGGEDGHFICVDEQAIGVADGVGGWADHGVDAGLYAKELMSNSMSAI 294 Query: 397 KDE-EVSQDPQILLMKAHAATSSIGSATVIVAMLEKTGTLKIASVGDCGLKVIRKGQVMF 573 KDE + + DP +L KA+ T + GS+T + L++ G + ++GD G ++R G+ + Sbjct: 295 KDEPQGTIDPSRVLEKAYTCTKARGSSTACIVALKEQG-IHAVNLGDSGFIIVRDGRTVL 353 Query: 574 STCPQEHYFDCPYQLSSEAIGQTSQDALVLH 666 + Q+H F+ YQL S A H Sbjct: 354 RSPVQQHDFNFTYQLESGGGSDLPSSAQTFH 384 Score = 41.6 bits (96), Expect(2) = 3e-19 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 4/95 (4%) Frame = +2 Query: 683 GDMIVSGSDGFFDNIFDQEILAVINESPGT----DXXXXXXXXXXXXHSVDVTFDSPYSM 850 GD+I++G+DG FDN++ EI A++ E+ T + ++D SP++ Sbjct: 390 GDVIIAGTDGLFDNLYSNEISAIVVEALRTGLEPEATAKKIAALAQQKAMDRNRQSPFAA 449 Query: 851 EARSRGFDVPWWXXXXXXXXXXXXMDDITVIVAQV 955 A+ G+ +DDITVIV+ V Sbjct: 450 AAQEAGY-----------RYFGGKLDDITVIVSYV 473
>AK100049:Os10g0370000 | Length = 465 Score = 62.4 bits (150), Expect(2) = 9e-17 Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 19/196 (9%) Frame = +1 Query: 88 TAMAASTASRLSPPRLHAAPNHPLRR-----------------SRFSPLRAAKLEAVLSI 216 T +ASTA+ P A P P R P+ ++ L VL+ Sbjct: 166 TESSASTAADDDQPAEFAVPPPPAEEVCNKVDWEKDTSEVKNTDRMVPVASSTL--VLAS 223 Query: 217 GTHVIPHPRKVETXXXXXXXXXXXXXXXXXXXXXXSGWAEKNVNPALFSRELMANSSTFI 396 G ++PHP K T W+ + +N L++RELM FI Sbjct: 224 GAAILPHPSKAATGGEDAYFIACDGWFGVADGVGQ--WSFEGINAGLYARELMDGCKKFI 281 Query: 397 KDEEVSQD--PQILLMKAHAATSSIGSATVIVAMLEKTGTLKIASVGDCGLKVIRKGQVM 570 + + + D P+ +L KA S GS+TV+VA + L +++GD G VIR G+V Sbjct: 282 MENQGAADIKPEQVLSKAADEAHSPGSSTVLVAHFDGQ-FLNASNIGDSGFLVIRNGEVY 340 Query: 571 FSTCPQEHYFDCPYQL 618 + P + F+ P Q+ Sbjct: 341 QKSKPMVYGFNFPLQI 356 Score = 43.1 bits (100), Expect(2) = 9e-17 Identities = 18/44 (40%), Positives = 31/44 (70%) Frame = +2 Query: 644 LKMHWFCTVNLMEGDMIVSGSDGFFDNIFDQEILAVINESPGTD 775 LK+ T+ L +GD+IV+ SDG FDN+++QE+ ++++S D Sbjct: 363 LKLVQNYTIELEDGDVIVTASDGLFDNVYEQEVATMVSKSLQAD 406
>AK071987:Os10g0370000 | Length = 465 Score = 62.4 bits (150), Expect(2) = 9e-17 Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 19/196 (9%) Frame = +1 Query: 88 TAMAASTASRLSPPRLHAAPNHPLRR-----------------SRFSPLRAAKLEAVLSI 216 T +ASTA+ P A P P R P+ ++ L VL+ Sbjct: 166 TESSASTAADDDQPAEFAVPPPPAEEVCNKVDWEKDTSEVKNTDRMVPVASSTL--VLAS 223 Query: 217 GTHVIPHPRKVETXXXXXXXXXXXXXXXXXXXXXXSGWAEKNVNPALFSRELMANSSTFI 396 G ++PHP K T W+ + +N L++RELM FI Sbjct: 224 GAAILPHPSKAATGGEDAYFIACDGWFGVADGVGQ--WSFEGINAGLYARELMDGCKKFI 281 Query: 397 KDEEVSQD--PQILLMKAHAATSSIGSATVIVAMLEKTGTLKIASVGDCGLKVIRKGQVM 570 + + + D P+ +L KA S GS+TV+VA + L +++GD G VIR G+V Sbjct: 282 MENQGAADIKPEQVLSKAADEAHSPGSSTVLVAHFDGQ-FLNASNIGDSGFLVIRNGEVY 340 Query: 571 FSTCPQEHYFDCPYQL 618 + P + F+ P Q+ Sbjct: 341 QKSKPMVYGFNFPLQI 356 Score = 43.1 bits (100), Expect(2) = 9e-17 Identities = 18/44 (40%), Positives = 31/44 (70%) Frame = +2 Query: 644 LKMHWFCTVNLMEGDMIVSGSDGFFDNIFDQEILAVINESPGTD 775 LK+ T+ L +GD+IV+ SDG FDN+++QE+ ++++S D Sbjct: 363 LKLVQNYTIELEDGDVIVTASDGLFDNVYEQEVATMVSKSLQAD 406
>AY603974:Os03g0192500 | Length = 569 Score = 52.4 bits (124), Expect(2) = 4e-15 Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 2/140 (1%) Frame = +1 Query: 205 VLSIGTHVIPHPRKVETXXXXXXXXXXXXXXXXXXXXXXSGWAEKNVNPALFSRELMANS 384 +L+ G ++PHP KV T W+ + +N L++RELM Sbjct: 324 ILASGAAMLPHPSKVLTGGEDAYFIACDGWFGVADGVGQ--WSFEGINAGLYARELMDGC 381 Query: 385 STFIKDEEVSQDPQI--LLMKAHAATSSIGSATVIVAMLEKTGTLKIASVGDCGLKVIRK 558 + + + + + + +L KA S GS+TV+VA + L ++GD G VIR Sbjct: 382 KKAVMESQGAPEMRTEEVLAKAADEARSPGSSTVLVAHFDGQ-VLHACNIGDSGFLVIRN 440 Query: 559 GQVMFSTCPQEHYFDCPYQL 618 G++ + P + F+ P Q+ Sbjct: 441 GEIYQKSKPMTYGFNFPLQI 460 Score = 47.4 bits (111), Expect(2) = 4e-15 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 4/102 (3%) Frame = +2 Query: 665 TVNLMEGDMIVSGSDGFFDNIFDQEILAVINESPGTDXXXXXXXXXXXXHSVDV----TF 832 T++L EGD IV+ +DG FDN++++EI AVI++S + +V T Sbjct: 474 TIDLQEGDAIVTATDGLFDNVYEEEIAAVISKSLEAGLKPSEIAEFLVARAKEVGRSATC 533 Query: 833 DSPYSMEARSRGFDVPWWXXXXXXXXXXXXMDDITVIVAQVK 958 SP+S A + G+ +DD+TV+V+ V+ Sbjct: 534 RSPFSDAALAVGY----------LGYSGGKLDDVTVVVSVVR 565
>AK068957:Os03g0192500 | Length = 569 Score = 52.4 bits (124), Expect(2) = 4e-15 Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 2/140 (1%) Frame = +1 Query: 205 VLSIGTHVIPHPRKVETXXXXXXXXXXXXXXXXXXXXXXSGWAEKNVNPALFSRELMANS 384 +L+ G ++PHP KV T W+ + +N L++RELM Sbjct: 324 ILASGAAMLPHPSKVLTGGEDAYFIACDGWFGVADGVGQ--WSFEGINAGLYARELMDGC 381 Query: 385 STFIKDEEVSQDPQI--LLMKAHAATSSIGSATVIVAMLEKTGTLKIASVGDCGLKVIRK 558 + + + + + + +L KA S GS+TV+VA + L ++GD G VIR Sbjct: 382 KKAVMESQGAPEMRTEEVLAKAADEARSPGSSTVLVAHFDGQ-VLHACNIGDSGFLVIRN 440 Query: 559 GQVMFSTCPQEHYFDCPYQL 618 G++ + P + F+ P Q+ Sbjct: 441 GEIYQKSKPMTYGFNFPLQI 460 Score = 47.4 bits (111), Expect(2) = 4e-15 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 4/102 (3%) Frame = +2 Query: 665 TVNLMEGDMIVSGSDGFFDNIFDQEILAVINESPGTDXXXXXXXXXXXXHSVDV----TF 832 T++L EGD IV+ +DG FDN++++EI AVI++S + +V T Sbjct: 474 TIDLQEGDAIVTATDGLFDNVYEEEIAAVISKSLEAGLKPSEIAEFLVARAKEVGRSATC 533 Query: 833 DSPYSMEARSRGFDVPWWXXXXXXXXXXXXMDDITVIVAQVK 958 SP+S A + G+ +DD+TV+V+ V+ Sbjct: 534 RSPFSDAALAVGY----------LGYSGGKLDDVTVVVSVVR 565
>AK107359: | Length = 421 Score = 44.3 bits (103), Expect(2) = 1e-07 Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 30/117 (25%) Frame = +1 Query: 400 DEEVSQDPQILLMKAHAATSS--------IGSATVIVAML---EKTGTLKIASVGDCGLK 546 D E DP L +A+AAT G+ T A+L + TL + +GDC + Sbjct: 189 DGENKPDPVRYLSEAYAATKEALGPPTEWFGTTTTSSALLHWEQDKPTLYVTQLGDCKVL 248 Query: 547 VIRK-------------------GQVMFSTCPQEHYFDCPYQLSSEAIGQTSQDALV 660 V+R G V+F+T Q HYFDCP QL + + ++A++ Sbjct: 249 VLRPDQEYKGNDDVSIDEQEDIGGNVVFATKEQWHYFDCPRQLGTNSPDTPEENAVL 305 Score = 30.0 bits (66), Expect(2) = 1e-07 Identities = 12/27 (44%), Positives = 20/27 (74%) Frame = +2 Query: 668 VNLMEGDMIVSGSDGFFDNIFDQEILA 748 V + EGD++++ SDG DN+++ EI A Sbjct: 308 VTVQEGDIVLAMSDGVTDNLWEHEISA 334
>AK111342:Os09g0449500 | Length = 243 Score = 31.2 bits (69), Expect = 1.5 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -3 Query: 182 RGEKRERRSGWLGAAWRRGGERRDAVEAAMAVLW 81 R ++R RRSGW R RR AV++ W Sbjct: 187 RRQRRRRRSGWCSTMTRAAARRRGAVDSKTRSFW 220
>Os01g0113700:Os01g0113700 | Length = 678 Score = 30.8 bits (68), Expect = 2.0 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -3 Query: 590 SCGHVENITWPFRITFKPQSPTLAIFRVPVFSSIATITV 474 SCGH++NI+ PFR PQ + + + S ATI + Sbjct: 28 SCGHLQNISHPFRRRGDPQRCGVPSYELDCRDSKATIRI 66
>AK108220:Os02g0452700 | Length = 120 Score = 29.6 bits (65), Expect = 4.5 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 5/58 (8%) Frame = +2 Query: 98 RLPPRHASRPLASTLLPTTRSGARASPLCAP-----PSWRLCYLLELM*SHTQERLRP 256 RLP R +SR A+ R G +P P PS L L +L SH + R+RP Sbjct: 6 RLPRRSSSRSAAAPPCLPRRGGTPGTPRAPPPPPLAPSLLLRELKKLAGSHGESRIRP 63
>Os01g0114400:Os01g0114400 | Length = 711 Score = 29.3 bits (64), Expect = 5.9 Identities = 10/20 (50%), Positives = 16/20 (80%) Frame = -3 Query: 590 SCGHVENITWPFRITFKPQS 531 SCGH++N+++PFR P+S Sbjct: 38 SCGHLQNVSYPFRRRGDPRS 57
>AK109979: | Length = 934 Score = 29.3 bits (64), Expect = 5.9 Identities = 20/83 (24%), Positives = 30/83 (36%) Frame = -3 Query: 1067 LFIHSVQRMQLQQQRVAHHPLSPVQFHYPHHLGSPPSSLARQ*P*CHPSYHLLA*LQVAS 888 + +H Q+ Q QQQ+ Q H+PH + P + Q P Sbjct: 223 VMLHQQQQQQQQQQQQQRQQQQQQQLHHPHQHPAQPQTPQPQQP---------------- 266 Query: 887 STKEHQNPYSGPPSSRVNRMLHP 819 ++HQ P S+V HP Sbjct: 267 -QQQHQPQQHMPSHSQVTLQSHP 288
>Os02g0157700:Os02g0157700 | Length = 628 Score = 29.3 bits (64), Expect = 5.9 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +1 Query: 94 MAASTASRLSPPRLHAAPNHPLRRSRFSPLRAA 192 MA +TASRL+ P +P+ P RR +PL +A Sbjct: 1 MATATASRLAVPAPRTSPHAPGRRRPAAPLPSA 33
>AK099995:Os04g0478000 | Length = 139 Score = 29.3 bits (64), Expect = 5.9 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +1 Query: 97 AASTASRLSPPRLHAAPNHPLRRSRFSPLRAAKLEAV 207 +A+TA+R+ PP AAP HP + +PL++A V Sbjct: 91 SAATAARMWPPAAKAAPMHPAAATA-APLQSATASVV 126
>AK067868:Os08g0176100 | Length = 323 Score = 28.9 bits (63), Expect = 7.7 Identities = 25/89 (28%), Positives = 36/89 (40%) Frame = +1 Query: 385 STFIKDEEVSQDPQILLMKAHAATSSIGSATVIVAMLEKTGTLKIASVGDCGLKVIRKGQ 564 S F ++ DP ILL KA AA G V+ L + + V G +R+ Sbjct: 233 SAFCVSFKLETDPDILLQKAEAALRKYGMNVVVANELANYKDV-VVMVTSNGRTTVRRPS 291 Query: 565 VMFSTCPQEHYFDCPYQLSSEAIGQTSQD 651 +E D ++ SE I Q +QD Sbjct: 292 KEDDV--EEQLIDLLVEMHSEHIMQLNQD 318 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 33,519,091 Number of extensions: 724034 Number of successful extensions: 2536 Number of sequences better than 10.0: 15 Number of HSP's gapped: 2517 Number of HSP's successfully gapped: 22 Length of query: 406 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 303 Effective length of database: 11,275,632 Effective search space: 3416516496 Effective search space used: 3416516496 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
