No.
Definition
Score (bits)
E Value
1 emb|CT833589.1| Oryza sativa (indica cultivar-group) cDNA clone:...
787
0.0
2 ref|NM_001048638.1| Oryza sativa (japonica cultivar-group) Os01g...
787
0.0
3 dbj|AK099645.1| Oryza sativa (japonica cultivar-group) cDNA clon...
779
0.0
4 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
141
7e-30
5 dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic D...
141
7e-30
6 dbj|AP003209.3| Oryza sativa (japonica cultivar-group) genomic D...
141
7e-30
7 dbj|AB049715.1| Pisum sativum ssa-4 mRNA for putative senescence...
50
0.019
8 ref|XM_631820.1| Dictyostelium discoideum AX4 hypothetical prote...
46
0.30
9 gb|AC131704.3| Mus musculus BAC clone RP24-149D9 from chromosome...
46
0.30
10 gb|AF241823.1|AF241823 Dictyostelium discoideum prespore protein...
46
0.30
11 gb|AC131785.3| Mus musculus BAC clone RP24-397D13 from chromosom...
44
1.2
12 dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp...
44
1.2
13 gb|AC079326.8| Homo sapiens chromosome 11, clone RP11-233I10, co...
44
1.2
14 gb|AC079073.7| Homo sapiens chromosome 11, clone RP11-72A10, com...
44
1.2
15 emb|AL596246.10| Mouse DNA sequence from clone RP23-186E14 on ch...
44
1.2
16 gb|CP000485.1| Bacillus thuringiensis str. Al Hakam, complete ge...
42
4.6
17 gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete...
42
4.6
18 gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
42
4.6
19 gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosom...
42
4.6
20 gb|AY275268.1| Streptococcus pyogenes acetyl coenzyme A acetyltr...
42
4.6
21 gb|AC146001.2| Pan troglodytes BAC clone RP43-148A6 from 7, comp...
42
4.6
22 gb|AC139886.3| Mus musculus BAC clone RP23-120M10 from chromosom...
42
4.6
23 gb|AC124455.6| Mus musculus BAC clone RP24-129J9 from chromosome...
42
4.6
24 gb|AC124176.3| Mus musculus BAC clone RP23-184D18 from 7, comple...
42
4.6
25 gb|AC134858.6| Mus musculus BAC clone RP23-361A18 from chromosom...
42
4.6
26 gb|CP000001.1| Bacillus cereus E33L, complete genome
42
4.6
27 gb|AC112683.10| Mus musculus chromosome 17, clone RP23-332P1, co...
42
4.6
28 gb|AC105057.7| Homo sapiens 3 BAC RP11-543P4 (Roswell Park Cance...
42
4.6
29 gb|AC084358.19| Homo sapiens 12p BAC RP11-418C2 (Roswell Park Ca...
42
4.6
30 dbj|AB121692.1| Mus musculus peptidylarginine deiminase gene clu...
42
4.6
31 emb|BX004772.17| Zebrafish DNA sequence from clone DKEY-15L1 in ...
42
4.6
32 gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
42
4.6
33 gb|U61375.1|HSU61375 Human cosmid LL12NC01-N-184C4, ETV6 gene, e...
42
4.6
34 gb|AC151051.2| Mus musculus BAC clone RP24-333M6 from 7, complet...
42
4.6
35 gb|AC141895.4| Mus musculus BAC clone RP23-299L22 from 10, compl...
42
4.6
36 emb|AL807805.7| Mouse DNA sequence from clone RP23-48K5 on chrom...
42
4.6
37 emb|AL606926.6| Mouse DNA sequence from clone RP23-231M4 on chro...
42
4.6
38 gb|M17982.1|MUSGFBPA3 Mouse epidermal growth factor binding prot...
42
4.6
39 emb|AL607073.15| Mouse DNA sequence from clone RP23-321K1 on chr...
42
4.6
>dbj|AP008207.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
Length = 43261740
Score = 141 bits (71), Expect = 7e-30
Identities = 110/123 (89%)
Strand = Plus / Minus
Query: 660 tttgcactgtaaatcttatggagggtgatatgatagtcagtggctcagatggattcttcg 719
||||||| |||||||||||||||||||||||||| |||||||||||||||||||| || |
Sbjct: 3333022 tttgcacagtaaatcttatggagggtgatatgattgtcagtggctcagatggattttttg 3332963
Query: 720 acaatatatttgatcaagagatccttgctgtcattaatgagtctccaggcacagatgaag 779
|||||||||| |||||||||||| || |||||||| ||||||||||| ||||||||
Sbjct: 3332962 acaatatattcgatcaagagatcgtttctgtcatttccgagtctccaggggtagatgaag 3332903
Query: 780 ctg 782
|||
Sbjct: 3332902 ctg 3332900
Score = 107 bits (54), Expect = 9e-20
Identities = 90/102 (88%)
Strand = Plus / Minus
Query: 558 aggccaagtgatgttctctacatgcccgcaagaacattactttgattgtccataccagct 617
||||||||| |||||||||||||| || ||||||||||||||||| || ||||||||| |
Sbjct: 3333488 aggccaagtaatgttctctacatgtcctcaagaacattactttgactgcccataccagtt 3333429
Query: 618 aagctccgaggcaattggtcaaacatctcaagatgcactggt 659
|||||| || |||||||||||||| | || |||||||||||
Sbjct: 3333428 aagctctgaagcaattggtcaaacgtatctggatgcactggt 3333387
Score = 97.6 bits (49), Expect = 9e-17
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 326 gatgggcagaaaagaatgtcaacccagctctgttttctcgagagcttatggcaaacagct 385
|||||||||||||| ||||||| || |||||||||||||||||||| |||||| ||| |
Sbjct: 3333954 gatgggcagaaaaggatgtcaatccggctctgttttctcgagagctcatggcacacactt 3333895
Query: 386 ctacttttatcaaagatgaggaggt 410
|||||||| |||| |||||||||||
Sbjct: 3333894 ctacttttctcaaggatgaggaggt 3333870
Score = 85.7 bits (43), Expect = 3e-13
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 913 aggtggtaagatggatgacattacggtcattgtcgcgcaagtgaagacggtggtgatccc 972
||||||||||||||||||||||||||| ||||| || || |||||| | ||| |||||||
Sbjct: 3332483 aggtggtaagatggatgacattacggttattgttgcacaggtgaaggcagtgatgatccc 3332424
Query: 973 agatgatgagg 983
|||||||||||
Sbjct: 3332423 agatgatgagg 3332413
Score = 77.8 bits (39), Expect = 8e-11
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 244 aaggttgagaccgggggagaagatgctttctttgtgggcggtgatggtggtggagtattt 303
|||| |||||| || ||||||||||||||||||||| ||| |||| ||||||||| |||
Sbjct: 3334240 aaggctgagactggcggagaagatgctttctttgtgaacggcgatgatggtggagtgttt 3334181
Query: 304 gccattgcagatggcgtttcagg 326
||| | |||||||| ||||||||
Sbjct: 3334180 gccgtcgcagatggagtttcagg 3334158
Score = 77.8 bits (39), Expect = 8e-11
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 195 gttggaggctgtgttatctattggaactcatgtaatcccacacccaagaaaggtt 249
|||||| ||||||||| |||||||||||||| |||| ||||||||||||||||||
Sbjct: 3334416 gttggaagctgtgttaactattggaactcatctaataccacacccaagaaaggtt 3334362
Score = 65.9 bits (33), Expect = 3e-07
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 782 gcaaaagctttagcggagctcgcgagaaaacattcagtggatgtaacattcgattcaccc 841
|||||||| |||| ||||| || || || |||||||||||||| || || |||||||||
Sbjct: 3332799 gcaaaagcactagcagagcttgcaaggaagcattcagtggatgtcacctttgattcaccc 3332740
Query: 842 tactcgatggaggcccggagt 862
||||| |||||||| ||||||
Sbjct: 3332739 tactcaatggaggctcggagt 3332719
Score = 63.9 bits (32), Expect = 1e-06
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 418 gatcctcaaattcttctaatgaaggctcatgctgcaacttcttccattggatctgc 473
|||||||| |||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 3333773 gatcctcagcttcttctaatgaaggctcatgctgcaacaacttctgttggatctgc 3333718
Score = 63.9 bits (32), Expect = 1e-06
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 153 cccgctccggcgctcgcgcttctcccctctgcgcgccgccaagt 196
|||||| || |||||||||||||||||||| |||||||||||||
Sbjct: 3334884 cccgcttcgccgctcgcgcttctcccctcttcgcgccgccaagt 3334841
Score = 61.9 bits (31), Expect = 5e-06
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 490 atgcttgagaagactggaaccctgaaaattgcgagtgtgggcgactgtggtttgaaagtt 549
|||||||||||||| || | || |||||||| |||||||| || ||||||||||||||
Sbjct: 3333624 atgcttgagaagacagggattctaaaaattgcaagtgtgggagattgtggtttgaaagta 3333565
Query: 550 attcgaaaagg 560
||| |||||||
Sbjct: 3333564 attagaaaagg 3333554
Score = 44.1 bits (22), Expect = 1.2
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 115 cgcctctcgccccctcgcctccacgc 140
||||||||||| ||||||||||||||
Sbjct: 3334934 cgcctctcgccgcctcgcctccacgc 3334909
>dbj|AP003301.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0701D05
Length = 172161
Score = 141 bits (71), Expect = 7e-30
Identities = 110/123 (89%)
Strand = Plus / Minus
Query: 660 tttgcactgtaaatcttatggagggtgatatgatagtcagtggctcagatggattcttcg 719
||||||| |||||||||||||||||||||||||| |||||||||||||||||||| || |
Sbjct: 11392 tttgcacagtaaatcttatggagggtgatatgattgtcagtggctcagatggattttttg 11333
Query: 720 acaatatatttgatcaagagatccttgctgtcattaatgagtctccaggcacagatgaag 779
|||||||||| |||||||||||| || |||||||| ||||||||||| ||||||||
Sbjct: 11332 acaatatattcgatcaagagatcgtttctgtcatttccgagtctccaggggtagatgaag 11273
Query: 780 ctg 782
|||
Sbjct: 11272 ctg 11270
Score = 107 bits (54), Expect = 9e-20
Identities = 90/102 (88%)
Strand = Plus / Minus
Query: 558 aggccaagtgatgttctctacatgcccgcaagaacattactttgattgtccataccagct 617
||||||||| |||||||||||||| || ||||||||||||||||| || ||||||||| |
Sbjct: 11858 aggccaagtaatgttctctacatgtcctcaagaacattactttgactgcccataccagtt 11799
Query: 618 aagctccgaggcaattggtcaaacatctcaagatgcactggt 659
|||||| || |||||||||||||| | || |||||||||||
Sbjct: 11798 aagctctgaagcaattggtcaaacgtatctggatgcactggt 11757
Score = 97.6 bits (49), Expect = 9e-17
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 326 gatgggcagaaaagaatgtcaacccagctctgttttctcgagagcttatggcaaacagct 385
|||||||||||||| ||||||| || |||||||||||||||||||| |||||| ||| |
Sbjct: 12324 gatgggcagaaaaggatgtcaatccggctctgttttctcgagagctcatggcacacactt 12265
Query: 386 ctacttttatcaaagatgaggaggt 410
|||||||| |||| |||||||||||
Sbjct: 12264 ctacttttctcaaggatgaggaggt 12240
Score = 85.7 bits (43), Expect = 3e-13
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 913 aggtggtaagatggatgacattacggtcattgtcgcgcaagtgaagacggtggtgatccc 972
||||||||||||||||||||||||||| ||||| || || |||||| | ||| |||||||
Sbjct: 10853 aggtggtaagatggatgacattacggttattgttgcacaggtgaaggcagtgatgatccc 10794
Query: 973 agatgatgagg 983
|||||||||||
Sbjct: 10793 agatgatgagg 10783
Score = 77.8 bits (39), Expect = 8e-11
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 244 aaggttgagaccgggggagaagatgctttctttgtgggcggtgatggtggtggagtattt 303
|||| |||||| || ||||||||||||||||||||| ||| |||| ||||||||| |||
Sbjct: 12610 aaggctgagactggcggagaagatgctttctttgtgaacggcgatgatggtggagtgttt 12551
Query: 304 gccattgcagatggcgtttcagg 326
||| | |||||||| ||||||||
Sbjct: 12550 gccgtcgcagatggagtttcagg 12528
Score = 77.8 bits (39), Expect = 8e-11
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 195 gttggaggctgtgttatctattggaactcatgtaatcccacacccaagaaaggtt 249
|||||| ||||||||| |||||||||||||| |||| ||||||||||||||||||
Sbjct: 12786 gttggaagctgtgttaactattggaactcatctaataccacacccaagaaaggtt 12732
Score = 65.9 bits (33), Expect = 3e-07
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 782 gcaaaagctttagcggagctcgcgagaaaacattcagtggatgtaacattcgattcaccc 841
|||||||| |||| ||||| || || || |||||||||||||| || || |||||||||
Sbjct: 11169 gcaaaagcactagcagagcttgcaaggaagcattcagtggatgtcacctttgattcaccc 11110
Query: 842 tactcgatggaggcccggagt 862
||||| |||||||| ||||||
Sbjct: 11109 tactcaatggaggctcggagt 11089
Score = 63.9 bits (32), Expect = 1e-06
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 418 gatcctcaaattcttctaatgaaggctcatgctgcaacttcttccattggatctgc 473
|||||||| |||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 12143 gatcctcagcttcttctaatgaaggctcatgctgcaacaacttctgttggatctgc 12088
Score = 63.9 bits (32), Expect = 1e-06
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 153 cccgctccggcgctcgcgcttctcccctctgcgcgccgccaagt 196
|||||| || |||||||||||||||||||| |||||||||||||
Sbjct: 13254 cccgcttcgccgctcgcgcttctcccctcttcgcgccgccaagt 13211
Score = 61.9 bits (31), Expect = 5e-06
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 490 atgcttgagaagactggaaccctgaaaattgcgagtgtgggcgactgtggtttgaaagtt 549
|||||||||||||| || | || |||||||| |||||||| || ||||||||||||||
Sbjct: 11994 atgcttgagaagacagggattctaaaaattgcaagtgtgggagattgtggtttgaaagta 11935
Query: 550 attcgaaaagg 560
||| |||||||
Sbjct: 11934 attagaaaagg 11924
Score = 44.1 bits (22), Expect = 1.2
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 115 cgcctctcgccccctcgcctccacgc 140
||||||||||| ||||||||||||||
Sbjct: 13304 cgcctctcgccgcctcgcctccacgc 13279
>dbj|AP003209.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1189A09
Length = 167761
Score = 141 bits (71), Expect = 7e-30
Identities = 110/123 (89%)
Strand = Plus / Minus
Query: 660 tttgcactgtaaatcttatggagggtgatatgatagtcagtggctcagatggattcttcg 719
||||||| |||||||||||||||||||||||||| |||||||||||||||||||| || |
Sbjct: 150651 tttgcacagtaaatcttatggagggtgatatgattgtcagtggctcagatggattttttg 150592
Query: 720 acaatatatttgatcaagagatccttgctgtcattaatgagtctccaggcacagatgaag 779
|||||||||| |||||||||||| || |||||||| ||||||||||| ||||||||
Sbjct: 150591 acaatatattcgatcaagagatcgtttctgtcatttccgagtctccaggggtagatgaag 150532
Query: 780 ctg 782
|||
Sbjct: 150531 ctg 150529
Score = 107 bits (54), Expect = 9e-20
Identities = 90/102 (88%)
Strand = Plus / Minus
Query: 558 aggccaagtgatgttctctacatgcccgcaagaacattactttgattgtccataccagct 617
||||||||| |||||||||||||| || ||||||||||||||||| || ||||||||| |
Sbjct: 151117 aggccaagtaatgttctctacatgtcctcaagaacattactttgactgcccataccagtt 151058
Query: 618 aagctccgaggcaattggtcaaacatctcaagatgcactggt 659
|||||| || |||||||||||||| | || |||||||||||
Sbjct: 151057 aagctctgaagcaattggtcaaacgtatctggatgcactggt 151016
Score = 97.6 bits (49), Expect = 9e-17
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 326 gatgggcagaaaagaatgtcaacccagctctgttttctcgagagcttatggcaaacagct 385
|||||||||||||| ||||||| || |||||||||||||||||||| |||||| ||| |
Sbjct: 151583 gatgggcagaaaaggatgtcaatccggctctgttttctcgagagctcatggcacacactt 151524
Query: 386 ctacttttatcaaagatgaggaggt 410
|||||||| |||| |||||||||||
Sbjct: 151523 ctacttttctcaaggatgaggaggt 151499
Score = 85.7 bits (43), Expect = 3e-13
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 913 aggtggtaagatggatgacattacggtcattgtcgcgcaagtgaagacggtggtgatccc 972
||||||||||||||||||||||||||| ||||| || || |||||| | ||| |||||||
Sbjct: 150112 aggtggtaagatggatgacattacggttattgttgcacaggtgaaggcagtgatgatccc 150053
Query: 973 agatgatgagg 983
|||||||||||
Sbjct: 150052 agatgatgagg 150042
Score = 77.8 bits (39), Expect = 8e-11
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 244 aaggttgagaccgggggagaagatgctttctttgtgggcggtgatggtggtggagtattt 303
|||| |||||| || ||||||||||||||||||||| ||| |||| ||||||||| |||
Sbjct: 151869 aaggctgagactggcggagaagatgctttctttgtgaacggcgatgatggtggagtgttt 151810
Query: 304 gccattgcagatggcgtttcagg 326
||| | |||||||| ||||||||
Sbjct: 151809 gccgtcgcagatggagtttcagg 151787
Score = 77.8 bits (39), Expect = 8e-11
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 195 gttggaggctgtgttatctattggaactcatgtaatcccacacccaagaaaggtt 249
|||||| ||||||||| |||||||||||||| |||| ||||||||||||||||||
Sbjct: 152045 gttggaagctgtgttaactattggaactcatctaataccacacccaagaaaggtt 151991
Score = 65.9 bits (33), Expect = 3e-07
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 782 gcaaaagctttagcggagctcgcgagaaaacattcagtggatgtaacattcgattcaccc 841
|||||||| |||| ||||| || || || |||||||||||||| || || |||||||||
Sbjct: 150428 gcaaaagcactagcagagcttgcaaggaagcattcagtggatgtcacctttgattcaccc 150369
Query: 842 tactcgatggaggcccggagt 862
||||| |||||||| ||||||
Sbjct: 150368 tactcaatggaggctcggagt 150348
Score = 63.9 bits (32), Expect = 1e-06
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 418 gatcctcaaattcttctaatgaaggctcatgctgcaacttcttccattggatctgc 473
|||||||| |||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 151402 gatcctcagcttcttctaatgaaggctcatgctgcaacaacttctgttggatctgc 151347
Score = 63.9 bits (32), Expect = 1e-06
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 153 cccgctccggcgctcgcgcttctcccctctgcgcgccgccaagt 196
|||||| || |||||||||||||||||||| |||||||||||||
Sbjct: 152513 cccgcttcgccgctcgcgcttctcccctcttcgcgccgccaagt 152470
Score = 61.9 bits (31), Expect = 5e-06
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 490 atgcttgagaagactggaaccctgaaaattgcgagtgtgggcgactgtggtttgaaagtt 549
|||||||||||||| || | || |||||||| |||||||| || ||||||||||||||
Sbjct: 151253 atgcttgagaagacagggattctaaaaattgcaagtgtgggagattgtggtttgaaagta 151194
Query: 550 attcgaaaagg 560
||| |||||||
Sbjct: 151193 attagaaaagg 151183
Score = 44.1 bits (22), Expect = 1.2
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 115 cgcctctcgccccctcgcctccacgc 140
||||||||||| ||||||||||||||
Sbjct: 152563 cgcctctcgccgcctcgcctccacgc 152538
>dbj|AB121692.1 | Mus musculus peptidylarginine deiminase gene cluster (Padi2, Padi1,
Padi23, Padi4, Padi6), complete cds
Length = 240498
Score = 42.1 bits (21), Expect = 4.6
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 730 tgatcaagagatccttgctgt 750
|||||||||||||||||||||
Sbjct: 71771 tgatcaagagatccttgctgt 71791
>emb|AL607073.15 | Mouse DNA sequence from clone RP23-321K1 on chromosome 4, complete
sequence
Length = 95219
Score = 42.1 bits (21), Expect = 4.6
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1079 tgaatagaaattcattttctt 1099
|||||||||||||||||||||
Sbjct: 856 tgaatagaaattcattttctt 836
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 230,953,653
Number of extensions: 12915951
Number of successful extensions: 302705
Number of sequences better than 10.0: 39
Number of HSP's gapped: 302701
Number of HSP's successfully gapped: 75
Length of query: 1219
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1196
Effective length of database: 18,503,978,556
Effective search space: 22130758352976
Effective search space used: 22130758352976
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)