ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf34p06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|CT833589.1| Oryza sativa (indica cultivar-group) cDNA clone:... 787 0.0
2ref|NM_001048638.1| Oryza sativa (japonica cultivar-group) Os01g... 787 0.0
3dbj|AK099645.1| Oryza sativa (japonica cultivar-group) cDNA clon... 779 0.0
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 141 7e-30
5dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic D... 141 7e-30
6dbj|AP003209.3| Oryza sativa (japonica cultivar-group) genomic D... 141 7e-30
7dbj|AB049715.1| Pisum sativum ssa-4 mRNA for putative senescence... 50 0.019
8ref|XM_631820.1| Dictyostelium discoideum AX4 hypothetical prote... 46 0.30
9gb|AC131704.3| Mus musculus BAC clone RP24-149D9 from chromosome... 46 0.30
10gb|AF241823.1|AF241823 Dictyostelium discoideum prespore protein... 46 0.30
11gb|AC131785.3| Mus musculus BAC clone RP24-397D13 from chromosom... 44 1.2
12dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 44 1.2
13gb|AC079326.8| Homo sapiens chromosome 11, clone RP11-233I10, co... 44 1.2
14gb|AC079073.7| Homo sapiens chromosome 11, clone RP11-72A10, com... 44 1.2
15emb|AL596246.10| Mouse DNA sequence from clone RP23-186E14 on ch... 44 1.2
16gb|CP000485.1| Bacillus thuringiensis str. Al Hakam, complete ge... 42 4.6
17gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 42 4.6
18gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 42 4.6
19gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosom... 42 4.6
20gb|AY275268.1| Streptococcus pyogenes acetyl coenzyme A acetyltr... 42 4.6
21gb|AC146001.2| Pan troglodytes BAC clone RP43-148A6 from 7, comp... 42 4.6
22gb|AC139886.3| Mus musculus BAC clone RP23-120M10 from chromosom... 42 4.6
23gb|AC124455.6| Mus musculus BAC clone RP24-129J9 from chromosome... 42 4.6
24gb|AC124176.3| Mus musculus BAC clone RP23-184D18 from 7, comple... 42 4.6
25gb|AC134858.6| Mus musculus BAC clone RP23-361A18 from chromosom... 42 4.6
26gb|CP000001.1| Bacillus cereus E33L, complete genome 42 4.6
27gb|AC112683.10| Mus musculus chromosome 17, clone RP23-332P1, co... 42 4.6
28gb|AC105057.7| Homo sapiens 3 BAC RP11-543P4 (Roswell Park Cance... 42 4.6
29gb|AC084358.19| Homo sapiens 12p BAC RP11-418C2 (Roswell Park Ca... 42 4.6
30dbj|AB121692.1| Mus musculus peptidylarginine deiminase gene clu... 42 4.6
31emb|BX004772.17| Zebrafish DNA sequence from clone DKEY-15L1 in ... 42 4.6
32gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 42 4.6
33gb|U61375.1|HSU61375 Human cosmid LL12NC01-N-184C4, ETV6 gene, e... 42 4.6
34gb|AC151051.2| Mus musculus BAC clone RP24-333M6 from 7, complet... 42 4.6
35gb|AC141895.4| Mus musculus BAC clone RP23-299L22 from 10, compl... 42 4.6
36emb|AL807805.7| Mouse DNA sequence from clone RP23-48K5 on chrom... 42 4.6
37emb|AL606926.6| Mouse DNA sequence from clone RP23-231M4 on chro... 42 4.6
38gb|M17982.1|MUSGFBPA3 Mouse epidermal growth factor binding prot... 42 4.6
39emb|AL607073.15| Mouse DNA sequence from clone RP23-321K1 on chr... 42 4.6

>emb|CT833589.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN038E02, full
           insert sequence
          Length = 1338
 Score =  787 bits (397), Expect = 0.0
 Identities = 725/833 (87%), Gaps = 1/833 (0%)
 Strand = Plus / Plus

                                                                       
Query: 153 cccgctccggcgctcgcgcttctcccctctgcgcgccgccaagttggaggctgtgttatc 212
           |||||| || |||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 140 cccgcttcgccgctcgcgcttctcccctcttcgcgccgccaagttggaagctgtgttatc 199

                                                                       
Query: 213 tattggaactcatgtaatcccacacccaagaaaggttgagaccgggggagaagatgcttt 272
           ||||||||||||| |||| |||||||||||||||| |||||| || ||||||||||||||
Sbjct: 200 tattggaactcatctaataccacacccaagaaaggctgagactggcggagaagatgcttt 259

                                                                       
Query: 273 ctttgtgggcggtgatggtggtggagtatttgccattgcagatggcgtttcaggatgggc 332
           |||||||  ||| |||| ||||||||| |||||| | |||||||| ||||||||||||||
Sbjct: 260 ctttgtgaacggcgatgatggtggagtgtttgccgtcgcagatggagtttcaggatgggc 319

                                                                       
Query: 333 agaaaagaatgtcaacccagctctgttttctcgagagcttatggcaaacagctctacttt 392
           ||||||| ||||||| || |||||||||||||||||||| |||||| |||  ||||||||
Sbjct: 320 agaaaaggatgtcaatccggctctgttttctcgagagctcatggcacacacttctacttt 379

                                                                       
Query: 393 tatcaaagatgaggaggttagtcaggatcctcaaattcttctaatgaaggctcatgctgc 452
           | |||| ||||| ||||| | ||| ||||||||  |||||||||||||||||||||||||
Sbjct: 380 tctcaaggatgatgaggtcaatcatgatcctcagcttcttctaatgaaggctcatgctgc 439

                                                                       
Query: 453 aacttcttccattggatctgctacagtaatcgtcgcgatgcttgagaagactggaaccct 512
           |||  ||||  |||||||||| || |||||| | || |||||||||||||| || |  ||
Sbjct: 440 aacaacttctgttggatctgcaactgtaatcattgcaatgcttgagaagacagggattct 499

                                                                       
Query: 513 gaaaattgcgagtgtgggcgactgtggtttgaaagttattcgaaaaggccaagtgatgtt 572
            |||||||| |||||||| || |||||||||||||| ||| ||||||||||||| |||||
Sbjct: 500 aaaaattgcaagtgtgggagattgtggtttgaaagtaattagaaaaggccaagtaatgtt 559

                                                                       
Query: 573 ctctacatgcccgcaagaacattactttgattgtccataccagctaagctccgaggcaat 632
           ||||||||| || ||||||||||||||||| || ||||||||| ||||||| || |||||
Sbjct: 560 ctctacatgtcctcaagaacattactttgactgcccataccagttaagctctgaagcaat 619

                                                                       
Query: 633 tggtcaaacatctcaagatgcactggttttgcactgtaaatcttatggagggtgatatga 692
           ||||||||| | ||  |||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 620 tggtcaaacgtatctggatgcactgg-tttgcacagtaaatcttatggagggtgatatga 678

                                                                       
Query: 693 tagtcagtggctcagatggattcttcgacaatatatttgatcaagagatccttgctgtca 752
           | |||||||||||||||||||| || ||||||||||| |||||||||||| || ||||||
Sbjct: 679 ttgtcagtggctcagatggattttttgacaatatattcgatcaagagatcgtttctgtca 738

                                                                       
Query: 753 ttaatgagtctccaggcacagatgaagctgcaaaagctttagcggagctcgcgagaaaac 812
           ||   |||||||||||   ||||||||||||||||||  |||| ||||| || || || |
Sbjct: 739 tttccgagtctccaggggtagatgaagctgcaaaagcactagcagagcttgcaaggaagc 798

                                                                       
Query: 813 attcagtggatgtaacattcgattcaccctactcgatggaggcccggagtaggggttttg 872
           |||| |||||||| || || |||||||||||||| |||||||| |||||| |||||||||
Sbjct: 799 attcggtggatgtcacctttgattcaccctactcaatggaggctcggagtcggggttttg 858

                                                                       
Query: 873 atgttccttggtggaagaagctacttggagctaagctagtaggtggtaagatggatgaca 932
           |||| || | |||||| ||| |  ||||||  || ||| |||||||||||||||||||||
Sbjct: 859 atgtcccctcgtggaaaaagttcattggagggaaactaataggtggtaagatggatgaca 918

                                                                
Query: 933 ttacggtcattgtcgcgcaagtgaagacggtggtgatcccagatgatgagggt 985
           ||||||| |||||||| || |||||| | ||| ||||||||||||||||||||
Sbjct: 919 ttacggttattgtcgcacaggtgaaggcagtgatgatcccagatgatgagggt 971



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 115 cgcctctcgccccctcgcctccacgc 140
           ||||||||||| ||||||||||||||
Sbjct: 90  cgcctctcgccgcctcgcctccacgc 115



to top

>ref|NM_001048638.1| Oryza sativa (japonica cultivar-group) Os01g0164600 (Os01g0164600)
           mRNA, complete cds
          Length = 1359

 Score =  787 bits (397), Expect = 0.0
 Identities = 725/833 (87%), Gaps = 1/833 (0%)
 Strand = Plus / Plus

                                                                       
Query: 153 cccgctccggcgctcgcgcttctcccctctgcgcgccgccaagttggaggctgtgttatc 212
           |||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| |
Sbjct: 152 cccgcttcgccgctcgcgcttctcccctcttcgcgccgccaagttggaagctgtgttaac 211

                                                                       
Query: 213 tattggaactcatgtaatcccacacccaagaaaggttgagaccgggggagaagatgcttt 272
           ||||||||||||| |||| |||||||||||||||| |||||| || ||||||||||||||
Sbjct: 212 tattggaactcatctaataccacacccaagaaaggctgagactggcggagaagatgcttt 271

                                                                       
Query: 273 ctttgtgggcggtgatggtggtggagtatttgccattgcagatggcgtttcaggatgggc 332
           |||||||  ||| |||| ||||||||| |||||| | |||||||| ||||||||||||||
Sbjct: 272 ctttgtgaacggcgatgatggtggagtgtttgccgtcgcagatggagtttcaggatgggc 331

                                                                       
Query: 333 agaaaagaatgtcaacccagctctgttttctcgagagcttatggcaaacagctctacttt 392
           ||||||| ||||||| || |||||||||||||||||||| |||||| |||  ||||||||
Sbjct: 332 agaaaaggatgtcaatccggctctgttttctcgagagctcatggcacacacttctacttt 391

                                                                       
Query: 393 tatcaaagatgaggaggttagtcaggatcctcaaattcttctaatgaaggctcatgctgc 452
           | |||| ||||||||||| | ||| ||||||||  |||||||||||||||||||||||||
Sbjct: 392 tctcaaggatgaggaggtcaatcatgatcctcagcttcttctaatgaaggctcatgctgc 451

                                                                       
Query: 453 aacttcttccattggatctgctacagtaatcgtcgcgatgcttgagaagactggaaccct 512
           |||  ||||  |||||||||| || |||||| | || |||||||||||||| || |  ||
Sbjct: 452 aacaacttctgttggatctgcaactgtaatcattgcaatgcttgagaagacagggattct 511

                                                                       
Query: 513 gaaaattgcgagtgtgggcgactgtggtttgaaagttattcgaaaaggccaagtgatgtt 572
            |||||||| |||||||| || |||||||||||||| ||| ||||||||||||| |||||
Sbjct: 512 aaaaattgcaagtgtgggagattgtggtttgaaagtaattagaaaaggccaagtaatgtt 571

                                                                       
Query: 573 ctctacatgcccgcaagaacattactttgattgtccataccagctaagctccgaggcaat 632
           ||||||||| || ||||||||||||||||| || ||||||||| ||||||| || |||||
Sbjct: 572 ctctacatgtcctcaagaacattactttgactgcccataccagttaagctctgaagcaat 631

                                                                       
Query: 633 tggtcaaacatctcaagatgcactggttttgcactgtaaatcttatggagggtgatatga 692
           ||||||||| | ||  |||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 632 tggtcaaacgtatctggatgcactgg-tttgcacagtaaatcttatggagggtgatatga 690

                                                                       
Query: 693 tagtcagtggctcagatggattcttcgacaatatatttgatcaagagatccttgctgtca 752
           | |||||||||||||||||||| || ||||||||||| |||||||||||| || ||||||
Sbjct: 691 ttgtcagtggctcagatggattttttgacaatatattcgatcaagagatcgtttctgtca 750

                                                                       
Query: 753 ttaatgagtctccaggcacagatgaagctgcaaaagctttagcggagctcgcgagaaaac 812
           ||   |||||||||||   ||||||||||||||||||  |||| ||||| || || || |
Sbjct: 751 tttccgagtctccaggggtagatgaagctgcaaaagcactagcagagcttgcaaggaagc 810

                                                                       
Query: 813 attcagtggatgtaacattcgattcaccctactcgatggaggcccggagtaggggttttg 872
           ||||||||||||| || || |||||||||||||| |||||||| |||||| |||||||||
Sbjct: 811 attcagtggatgtcacctttgattcaccctactcaatggaggctcggagtcggggttttg 870

                                                                       
Query: 873 atgttccttggtggaagaagctacttggagctaagctagtaggtggtaagatggatgaca 932
           |||| || | |||||| ||| |  ||||||  || ||| |||||||||||||||||||||
Sbjct: 871 atgtcccctcgtggaaaaagttcattggagggaaactaataggtggtaagatggatgaca 930

                                                                
Query: 933 ttacggtcattgtcgcgcaagtgaagacggtggtgatcccagatgatgagggt 985
           ||||||| ||||| || || |||||| | ||| ||||||||||||||||||||
Sbjct: 931 ttacggttattgttgcacaggtgaaggcagtgatgatcccagatgatgagggt 983



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 115 cgcctctcgccccctcgcctccacgc 140
           ||||||||||| ||||||||||||||
Sbjct: 102 cgcctctcgccgcctcgcctccacgc 127



to top

>dbj|AK099645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064A15, full
           insert sequence
          Length = 1361

 Score =  779 bits (393), Expect = 0.0
 Identities = 725/833 (87%), Gaps = 2/833 (0%)
 Strand = Plus / Plus

                                                                       
Query: 153 cccgctccggcgctcgcgcttctcccctctgcgcgccgccaagttggaggctgtgttatc 212
           |||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| |
Sbjct: 155 cccgcttcgccgctcgcgcttctcccctcttcgcgccgccaagttggaagctgtgttaac 214

                                                                       
Query: 213 tattggaactcatgtaatcccacacccaagaaaggttgagaccgggggagaagatgcttt 272
           ||||||||||||| |||| |||||||||||||||| |||||| || ||||||||||||||
Sbjct: 215 tattggaactcatctaataccacacccaagaaaggctgagactggcggagaagatgcttt 274

                                                                       
Query: 273 ctttgtgggcggtgatggtggtggagtatttgccattgcagatggcgtttcaggatgggc 332
           |||||||  ||| |||| ||||||||| |||||| | |||||||| ||||||||||||||
Sbjct: 275 ctttgtgaacggcgatgatggtggagtgtttgccgtcgcagatggagtttcaggatgggc 334

                                                                       
Query: 333 agaaaagaatgtcaacccagctctgttttctcgagagcttatggcaaacagctctacttt 392
           ||||||| ||||||| || |||||||||||||||||||| |||||| |||  ||||||||
Sbjct: 335 agaaaaggatgtcaatccggctctgttttctcgagagctcatggcacacacttctacttt 394

                                                                       
Query: 393 tatcaaagatgaggaggttagtcaggatcctcaaattcttctaatgaaggctcatgctgc 452
           | |||| ||||||||||| | ||| ||||||||  |||||||||||||||||||||||||
Sbjct: 395 t-tcaaggatgaggaggtcaatcatgatcctcagcttcttctaatgaaggctcatgctgc 453

                                                                       
Query: 453 aacttcttccattggatctgctacagtaatcgtcgcgatgcttgagaagactggaaccct 512
           |||  ||||  |||||||||| || |||||| | || |||||||||||||| || |  ||
Sbjct: 454 aacaacttctgttggatctgcaactgtaatcattgcaatgcttgagaagacagggattct 513

                                                                       
Query: 513 gaaaattgcgagtgtgggcgactgtggtttgaaagttattcgaaaaggccaagtgatgtt 572
            |||||||| |||||||| || |||||||||||||| ||| ||||||||||||| |||||
Sbjct: 514 aaaaattgcaagtgtgggagattgtggtttgaaagtaattagaaaaggccaagtaatgtt 573

                                                                       
Query: 573 ctctacatgcccgcaagaacattactttgattgtccataccagctaagctccgaggcaat 632
           ||||||||| || ||||||||||||||||| || ||||||||| ||||||| || |||||
Sbjct: 574 ctctacatgtcctcaagaacattactttgactgcccataccagttaagctctgaagcaat 633

                                                                       
Query: 633 tggtcaaacatctcaagatgcactggttttgcactgtaaatcttatggagggtgatatga 692
           ||||||||| | ||  ||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 634 tggtcaaacgtatctggatgcactggttt-gcacagtaaatcttatggagggtgatatga 692

                                                                       
Query: 693 tagtcagtggctcagatggattcttcgacaatatatttgatcaagagatccttgctgtca 752
           | |||||||||||||||||||| || ||||||||||| |||||||||||| || ||||||
Sbjct: 693 ttgtcagtggctcagatggattttttgacaatatattcgatcaagagatcgtttctgtca 752

                                                                       
Query: 753 ttaatgagtctccaggcacagatgaagctgcaaaagctttagcggagctcgcgagaaaac 812
           ||   |||||||||||   ||||||||||||||||||  |||| ||||| || || || |
Sbjct: 753 tttccgagtctccaggggtagatgaagctgcaaaagcactagcagagcttgcaaggaagc 812

                                                                       
Query: 813 attcagtggatgtaacattcgattcaccctactcgatggaggcccggagtaggggttttg 872
           ||||||||||||| || || |||||||||||||| |||||||| |||||| |||||||||
Sbjct: 813 attcagtggatgtcacctttgattcaccctactcaatggaggctcggagtcggggttttg 872

                                                                       
Query: 873 atgttccttggtggaagaagctacttggagctaagctagtaggtggtaagatggatgaca 932
           |||| || | |||||| ||| |  ||||||  || ||| |||||||||||||||||||||
Sbjct: 873 atgtcccctcgtggaaaaagttcattggagggaaactaataggtggtaagatggatgaca 932

                                                                
Query: 933 ttacggtcattgtcgcgcaagtgaagacggtggtgatcccagatgatgagggt 985
           ||||||| ||||| || || |||||| | ||| ||||||||||||||||||||
Sbjct: 933 ttacggttattgttgcacaggtgaaggcagtgatgatcccagatgatgagggt 985



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 115 cgcctctcgccccctcgcctccacgc 140
           ||||||||||| ||||||||||||||
Sbjct: 105 cgcctctcgccgcctcgcctccacgc 130



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  141 bits (71), Expect = 7e-30
 Identities = 110/123 (89%)
 Strand = Plus / Minus

                                                                           
Query: 660     tttgcactgtaaatcttatggagggtgatatgatagtcagtggctcagatggattcttcg 719
               ||||||| |||||||||||||||||||||||||| |||||||||||||||||||| || |
Sbjct: 3333022 tttgcacagtaaatcttatggagggtgatatgattgtcagtggctcagatggattttttg 3332963

                                                                           
Query: 720     acaatatatttgatcaagagatccttgctgtcattaatgagtctccaggcacagatgaag 779
               |||||||||| |||||||||||| || ||||||||   |||||||||||   ||||||||
Sbjct: 3332962 acaatatattcgatcaagagatcgtttctgtcatttccgagtctccaggggtagatgaag 3332903

                  
Query: 780     ctg 782
               |||
Sbjct: 3332902 ctg 3332900



 Score =  107 bits (54), Expect = 9e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                           
Query: 558     aggccaagtgatgttctctacatgcccgcaagaacattactttgattgtccataccagct 617
               ||||||||| |||||||||||||| || ||||||||||||||||| || ||||||||| |
Sbjct: 3333488 aggccaagtaatgttctctacatgtcctcaagaacattactttgactgcccataccagtt 3333429

                                                         
Query: 618     aagctccgaggcaattggtcaaacatctcaagatgcactggt 659
               |||||| || |||||||||||||| | ||  |||||||||||
Sbjct: 3333428 aagctctgaagcaattggtcaaacgtatctggatgcactggt 3333387



 Score = 97.6 bits (49), Expect = 9e-17
 Identities = 76/85 (89%)
 Strand = Plus / Minus

                                                                           
Query: 326     gatgggcagaaaagaatgtcaacccagctctgttttctcgagagcttatggcaaacagct 385
               |||||||||||||| ||||||| || |||||||||||||||||||| |||||| |||  |
Sbjct: 3333954 gatgggcagaaaaggatgtcaatccggctctgttttctcgagagctcatggcacacactt 3333895

                                        
Query: 386     ctacttttatcaaagatgaggaggt 410
               |||||||| |||| |||||||||||
Sbjct: 3333894 ctacttttctcaaggatgaggaggt 3333870



 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                           
Query: 913     aggtggtaagatggatgacattacggtcattgtcgcgcaagtgaagacggtggtgatccc 972
               ||||||||||||||||||||||||||| ||||| || || |||||| | ||| |||||||
Sbjct: 3332483 aggtggtaagatggatgacattacggttattgttgcacaggtgaaggcagtgatgatccc 3332424

                          
Query: 973     agatgatgagg 983
               |||||||||||
Sbjct: 3332423 agatgatgagg 3332413



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                           
Query: 244     aaggttgagaccgggggagaagatgctttctttgtgggcggtgatggtggtggagtattt 303
               |||| |||||| || |||||||||||||||||||||  ||| |||| ||||||||| |||
Sbjct: 3334240 aaggctgagactggcggagaagatgctttctttgtgaacggcgatgatggtggagtgttt 3334181

                                      
Query: 304     gccattgcagatggcgtttcagg 326
               ||| | |||||||| ||||||||
Sbjct: 3334180 gccgtcgcagatggagtttcagg 3334158



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 51/55 (92%)
 Strand = Plus / Minus

                                                                      
Query: 195     gttggaggctgtgttatctattggaactcatgtaatcccacacccaagaaaggtt 249
               |||||| ||||||||| |||||||||||||| |||| ||||||||||||||||||
Sbjct: 3334416 gttggaagctgtgttaactattggaactcatctaataccacacccaagaaaggtt 3334362



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                           
Query: 782     gcaaaagctttagcggagctcgcgagaaaacattcagtggatgtaacattcgattcaccc 841
               ||||||||  |||| ||||| || || || |||||||||||||| || || |||||||||
Sbjct: 3332799 gcaaaagcactagcagagcttgcaaggaagcattcagtggatgtcacctttgattcaccc 3332740

                                    
Query: 842     tactcgatggaggcccggagt 862
               ||||| |||||||| ||||||
Sbjct: 3332739 tactcaatggaggctcggagt 3332719



 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                       
Query: 418     gatcctcaaattcttctaatgaaggctcatgctgcaacttcttccattggatctgc 473
               ||||||||  ||||||||||||||||||||||||||||  ||||  ||||||||||
Sbjct: 3333773 gatcctcagcttcttctaatgaaggctcatgctgcaacaacttctgttggatctgc 3333718



 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                           
Query: 153     cccgctccggcgctcgcgcttctcccctctgcgcgccgccaagt 196
               |||||| || |||||||||||||||||||| |||||||||||||
Sbjct: 3334884 cccgcttcgccgctcgcgcttctcccctcttcgcgccgccaagt 3334841



 Score = 61.9 bits (31), Expect = 5e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                           
Query: 490     atgcttgagaagactggaaccctgaaaattgcgagtgtgggcgactgtggtttgaaagtt 549
               |||||||||||||| || |  || |||||||| |||||||| || |||||||||||||| 
Sbjct: 3333624 atgcttgagaagacagggattctaaaaattgcaagtgtgggagattgtggtttgaaagta 3333565

                          
Query: 550     attcgaaaagg 560
               ||| |||||||
Sbjct: 3333564 attagaaaagg 3333554



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 115     cgcctctcgccccctcgcctccacgc 140
               ||||||||||| ||||||||||||||
Sbjct: 3334934 cgcctctcgccgcctcgcctccacgc 3334909



to top

>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0701D05
          Length = 172161

 Score =  141 bits (71), Expect = 7e-30
 Identities = 110/123 (89%)
 Strand = Plus / Minus

                                                                         
Query: 660   tttgcactgtaaatcttatggagggtgatatgatagtcagtggctcagatggattcttcg 719
             ||||||| |||||||||||||||||||||||||| |||||||||||||||||||| || |
Sbjct: 11392 tttgcacagtaaatcttatggagggtgatatgattgtcagtggctcagatggattttttg 11333

                                                                         
Query: 720   acaatatatttgatcaagagatccttgctgtcattaatgagtctccaggcacagatgaag 779
             |||||||||| |||||||||||| || ||||||||   |||||||||||   ||||||||
Sbjct: 11332 acaatatattcgatcaagagatcgtttctgtcatttccgagtctccaggggtagatgaag 11273

                
Query: 780   ctg 782
             |||
Sbjct: 11272 ctg 11270



 Score =  107 bits (54), Expect = 9e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                         
Query: 558   aggccaagtgatgttctctacatgcccgcaagaacattactttgattgtccataccagct 617
             ||||||||| |||||||||||||| || ||||||||||||||||| || ||||||||| |
Sbjct: 11858 aggccaagtaatgttctctacatgtcctcaagaacattactttgactgcccataccagtt 11799

                                                       
Query: 618   aagctccgaggcaattggtcaaacatctcaagatgcactggt 659
             |||||| || |||||||||||||| | ||  |||||||||||
Sbjct: 11798 aagctctgaagcaattggtcaaacgtatctggatgcactggt 11757



 Score = 97.6 bits (49), Expect = 9e-17
 Identities = 76/85 (89%)
 Strand = Plus / Minus

                                                                         
Query: 326   gatgggcagaaaagaatgtcaacccagctctgttttctcgagagcttatggcaaacagct 385
             |||||||||||||| ||||||| || |||||||||||||||||||| |||||| |||  |
Sbjct: 12324 gatgggcagaaaaggatgtcaatccggctctgttttctcgagagctcatggcacacactt 12265

                                      
Query: 386   ctacttttatcaaagatgaggaggt 410
             |||||||| |||| |||||||||||
Sbjct: 12264 ctacttttctcaaggatgaggaggt 12240



 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                         
Query: 913   aggtggtaagatggatgacattacggtcattgtcgcgcaagtgaagacggtggtgatccc 972
             ||||||||||||||||||||||||||| ||||| || || |||||| | ||| |||||||
Sbjct: 10853 aggtggtaagatggatgacattacggttattgttgcacaggtgaaggcagtgatgatccc 10794

                        
Query: 973   agatgatgagg 983
             |||||||||||
Sbjct: 10793 agatgatgagg 10783



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                         
Query: 244   aaggttgagaccgggggagaagatgctttctttgtgggcggtgatggtggtggagtattt 303
             |||| |||||| || |||||||||||||||||||||  ||| |||| ||||||||| |||
Sbjct: 12610 aaggctgagactggcggagaagatgctttctttgtgaacggcgatgatggtggagtgttt 12551

                                    
Query: 304   gccattgcagatggcgtttcagg 326
             ||| | |||||||| ||||||||
Sbjct: 12550 gccgtcgcagatggagtttcagg 12528



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 51/55 (92%)
 Strand = Plus / Minus

                                                                    
Query: 195   gttggaggctgtgttatctattggaactcatgtaatcccacacccaagaaaggtt 249
             |||||| ||||||||| |||||||||||||| |||| ||||||||||||||||||
Sbjct: 12786 gttggaagctgtgttaactattggaactcatctaataccacacccaagaaaggtt 12732



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                         
Query: 782   gcaaaagctttagcggagctcgcgagaaaacattcagtggatgtaacattcgattcaccc 841
             ||||||||  |||| ||||| || || || |||||||||||||| || || |||||||||
Sbjct: 11169 gcaaaagcactagcagagcttgcaaggaagcattcagtggatgtcacctttgattcaccc 11110

                                  
Query: 842   tactcgatggaggcccggagt 862
             ||||| |||||||| ||||||
Sbjct: 11109 tactcaatggaggctcggagt 11089



 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                     
Query: 418   gatcctcaaattcttctaatgaaggctcatgctgcaacttcttccattggatctgc 473
             ||||||||  ||||||||||||||||||||||||||||  ||||  ||||||||||
Sbjct: 12143 gatcctcagcttcttctaatgaaggctcatgctgcaacaacttctgttggatctgc 12088



 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                         
Query: 153   cccgctccggcgctcgcgcttctcccctctgcgcgccgccaagt 196
             |||||| || |||||||||||||||||||| |||||||||||||
Sbjct: 13254 cccgcttcgccgctcgcgcttctcccctcttcgcgccgccaagt 13211



 Score = 61.9 bits (31), Expect = 5e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                         
Query: 490   atgcttgagaagactggaaccctgaaaattgcgagtgtgggcgactgtggtttgaaagtt 549
             |||||||||||||| || |  || |||||||| |||||||| || |||||||||||||| 
Sbjct: 11994 atgcttgagaagacagggattctaaaaattgcaagtgtgggagattgtggtttgaaagta 11935

                        
Query: 550   attcgaaaagg 560
             ||| |||||||
Sbjct: 11934 attagaaaagg 11924



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 115   cgcctctcgccccctcgcctccacgc 140
             ||||||||||| ||||||||||||||
Sbjct: 13304 cgcctctcgccgcctcgcctccacgc 13279



to top

>dbj|AP003209.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1189A09
          Length = 167761

 Score =  141 bits (71), Expect = 7e-30
 Identities = 110/123 (89%)
 Strand = Plus / Minus

                                                                          
Query: 660    tttgcactgtaaatcttatggagggtgatatgatagtcagtggctcagatggattcttcg 719
              ||||||| |||||||||||||||||||||||||| |||||||||||||||||||| || |
Sbjct: 150651 tttgcacagtaaatcttatggagggtgatatgattgtcagtggctcagatggattttttg 150592

                                                                          
Query: 720    acaatatatttgatcaagagatccttgctgtcattaatgagtctccaggcacagatgaag 779
              |||||||||| |||||||||||| || ||||||||   |||||||||||   ||||||||
Sbjct: 150591 acaatatattcgatcaagagatcgtttctgtcatttccgagtctccaggggtagatgaag 150532

                 
Query: 780    ctg 782
              |||
Sbjct: 150531 ctg 150529



 Score =  107 bits (54), Expect = 9e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                          
Query: 558    aggccaagtgatgttctctacatgcccgcaagaacattactttgattgtccataccagct 617
              ||||||||| |||||||||||||| || ||||||||||||||||| || ||||||||| |
Sbjct: 151117 aggccaagtaatgttctctacatgtcctcaagaacattactttgactgcccataccagtt 151058

                                                        
Query: 618    aagctccgaggcaattggtcaaacatctcaagatgcactggt 659
              |||||| || |||||||||||||| | ||  |||||||||||
Sbjct: 151057 aagctctgaagcaattggtcaaacgtatctggatgcactggt 151016



 Score = 97.6 bits (49), Expect = 9e-17
 Identities = 76/85 (89%)
 Strand = Plus / Minus

                                                                          
Query: 326    gatgggcagaaaagaatgtcaacccagctctgttttctcgagagcttatggcaaacagct 385
              |||||||||||||| ||||||| || |||||||||||||||||||| |||||| |||  |
Sbjct: 151583 gatgggcagaaaaggatgtcaatccggctctgttttctcgagagctcatggcacacactt 151524

                                       
Query: 386    ctacttttatcaaagatgaggaggt 410
              |||||||| |||| |||||||||||
Sbjct: 151523 ctacttttctcaaggatgaggaggt 151499



 Score = 85.7 bits (43), Expect = 3e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                          
Query: 913    aggtggtaagatggatgacattacggtcattgtcgcgcaagtgaagacggtggtgatccc 972
              ||||||||||||||||||||||||||| ||||| || || |||||| | ||| |||||||
Sbjct: 150112 aggtggtaagatggatgacattacggttattgttgcacaggtgaaggcagtgatgatccc 150053

                         
Query: 973    agatgatgagg 983
              |||||||||||
Sbjct: 150052 agatgatgagg 150042



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                          
Query: 244    aaggttgagaccgggggagaagatgctttctttgtgggcggtgatggtggtggagtattt 303
              |||| |||||| || |||||||||||||||||||||  ||| |||| ||||||||| |||
Sbjct: 151869 aaggctgagactggcggagaagatgctttctttgtgaacggcgatgatggtggagtgttt 151810

                                     
Query: 304    gccattgcagatggcgtttcagg 326
              ||| | |||||||| ||||||||
Sbjct: 151809 gccgtcgcagatggagtttcagg 151787



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 51/55 (92%)
 Strand = Plus / Minus

                                                                     
Query: 195    gttggaggctgtgttatctattggaactcatgtaatcccacacccaagaaaggtt 249
              |||||| ||||||||| |||||||||||||| |||| ||||||||||||||||||
Sbjct: 152045 gttggaagctgtgttaactattggaactcatctaataccacacccaagaaaggtt 151991



 Score = 65.9 bits (33), Expect = 3e-07
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                          
Query: 782    gcaaaagctttagcggagctcgcgagaaaacattcagtggatgtaacattcgattcaccc 841
              ||||||||  |||| ||||| || || || |||||||||||||| || || |||||||||
Sbjct: 150428 gcaaaagcactagcagagcttgcaaggaagcattcagtggatgtcacctttgattcaccc 150369

                                   
Query: 842    tactcgatggaggcccggagt 862
              ||||| |||||||| ||||||
Sbjct: 150368 tactcaatggaggctcggagt 150348



 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                      
Query: 418    gatcctcaaattcttctaatgaaggctcatgctgcaacttcttccattggatctgc 473
              ||||||||  ||||||||||||||||||||||||||||  ||||  ||||||||||
Sbjct: 151402 gatcctcagcttcttctaatgaaggctcatgctgcaacaacttctgttggatctgc 151347



 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                          
Query: 153    cccgctccggcgctcgcgcttctcccctctgcgcgccgccaagt 196
              |||||| || |||||||||||||||||||| |||||||||||||
Sbjct: 152513 cccgcttcgccgctcgcgcttctcccctcttcgcgccgccaagt 152470



 Score = 61.9 bits (31), Expect = 5e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                          
Query: 490    atgcttgagaagactggaaccctgaaaattgcgagtgtgggcgactgtggtttgaaagtt 549
              |||||||||||||| || |  || |||||||| |||||||| || |||||||||||||| 
Sbjct: 151253 atgcttgagaagacagggattctaaaaattgcaagtgtgggagattgtggtttgaaagta 151194

                         
Query: 550    attcgaaaagg 560
              ||| |||||||
Sbjct: 151193 attagaaaagg 151183



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 115    cgcctctcgccccctcgcctccacgc 140
              ||||||||||| ||||||||||||||
Sbjct: 152563 cgcctctcgccgcctcgcctccacgc 152538



to top

>dbj|AB049715.1| Pisum sativum ssa-4 mRNA for putative senescence-associated
           protein, complete cds
          Length = 1118

 Score = 50.1 bits (25), Expect = 0.019
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 583 ccgcaagaacattactttgattgtccataccagctaagctc 623
           |||||||||||||||||||| ||||||| ||| || |||||
Sbjct: 588 ccgcaagaacattactttgactgtccattccaactgagctc 628



to top

>ref|XM_631820.1| Dictyostelium discoideum AX4 hypothetical protein
           (DDBDRAFT_0187791) mRNA, complete cds
          Length = 1182

 Score = 46.1 bits (23), Expect = 0.30
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 707 gatggattcttcgacaatatatttgatcaagagat 741
           |||||||| || || ||||||||||||||||||||
Sbjct: 964 gatggattttttgataatatatttgatcaagagat 998



to top

>gb|AC131704.3| Mus musculus BAC clone RP24-149D9 from chromosome 12, complete sequence
          Length = 163959

 Score = 46.1 bits (23), Expect = 0.30
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 1078  ttgaatagaaattcattttcttt 1100
             |||||||||||||||||||||||
Sbjct: 83185 ttgaatagaaattcattttcttt 83163



to top

>gb|AF241823.1|AF241823 Dictyostelium discoideum prespore protein MF12 gene, promoter and
           partial cds
          Length = 5312

 Score = 46.1 bits (23), Expect = 0.30
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 707 gatggattcttcgacaatatatttgatcaagagat 741
           |||||||| || || ||||||||||||||||||||
Sbjct: 759 gatggattttttgataatatatttgatcaagagat 793



to top

>gb|AC131785.3| Mus musculus BAC clone RP24-397D13 from chromosome 17, complete
             sequence
          Length = 147557

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1093  ttttcttttccattttggtcat 1114
             ||||||||||||||||||||||
Sbjct: 62524 ttttcttttccattttggtcat 62545



to top

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 78      cagccagaggacggccatggcg 99
               ||||||||||||||||||||||
Sbjct: 1706647 cagccagaggacggccatggcg 1706668



to top

>gb|AC079326.8| Homo sapiens chromosome 11, clone RP11-233I10, complete sequence
          Length = 180353

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1068  gttgtatatgttgaatagaaat 1089
             ||||||||||||||||||||||
Sbjct: 50131 gttgtatatgttgaatagaaat 50152



to top

>gb|AC079073.7| Homo sapiens chromosome 11, clone RP11-72A10, complete sequence
          Length = 173119

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1068   gttgtatatgttgaatagaaat 1089
              ||||||||||||||||||||||
Sbjct: 161776 gttgtatatgttgaatagaaat 161797



to top

>emb|AL596246.10| Mouse DNA sequence from clone RP23-186E14 on chromosome 11, complete
             sequence
          Length = 144136

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 326   gatgggcagaaaagaatgtcaa 347
             ||||||||||||||||||||||
Sbjct: 35997 gatgggcagaaaagaatgtcaa 36018



to top

>gb|CP000485.1| Bacillus thuringiensis str. Al Hakam, complete genome
          Length = 5257091

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 774     atgaagctgcaaaagctttag 794
               |||||||||||||||||||||
Sbjct: 3853733 atgaagctgcaaaagctttag 3853713



to top

>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 774     atgaagctgcaaaagctttag 794
               |||||||||||||||||||||
Sbjct: 3867089 atgaagctgcaaaagctttag 3867069



to top

>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 774     atgaagctgcaaaagctttag 794
               |||||||||||||||||||||
Sbjct: 3867462 atgaagctgcaaaagctttag 3867442



to top

>gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosome 17, complete
             sequence
          Length = 184079

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 759   agtctccaggcacagatgaag 779
             |||||||||||||||||||||
Sbjct: 14266 agtctccaggcacagatgaag 14246



to top

>gb|AY275268.1| Streptococcus pyogenes acetyl coenzyme A acetyltransferase (yqiL)
           gene, yqiL-38 allele, partial cds
          Length = 434

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 386 ctacttttatcaaagatgagg 406
           |||||||||||||||||||||
Sbjct: 170 ctacttttatcaaagatgagg 190



to top

>gb|AC146001.2| Pan troglodytes BAC clone RP43-148A6 from 7, complete sequence
          Length = 154218

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1081  aatagaaattcattttctttt 1101
             |||||||||||||||||||||
Sbjct: 55048 aatagaaattcattttctttt 55068



to top

>gb|AC139886.3| Mus musculus BAC clone RP23-120M10 from chromosome 15, complete
             sequence
          Length = 211336

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 323   caggatgggcagaaaagaatg 343
             |||||||||||||||||||||
Sbjct: 32249 caggatgggcagaaaagaatg 32229



to top

>gb|AC124455.6| Mus musculus BAC clone RP24-129J9 from chromosome 15, complete sequence
          Length = 167059

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 323    caggatgggcagaaaagaatg 343
              |||||||||||||||||||||
Sbjct: 163889 caggatgggcagaaaagaatg 163869



to top

>gb|AC124176.3| Mus musculus BAC clone RP23-184D18 from 7, complete sequence
          Length = 180922

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1000  ggagaaagtgggtggtgagca 1020
             |||||||||||||||||||||
Sbjct: 75590 ggagaaagtgggtggtgagca 75570



 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1000   ggagaaagtgggtggtgagca 1020
              |||||||||||||||||||||
Sbjct: 126438 ggagaaagtgggtggtgagca 126418



to top

>gb|AC134858.6| Mus musculus BAC clone RP23-361A18 from chromosome 7, complete sequence
          Length = 214282

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1000   ggagaaagtgggtggtgagca 1020
              |||||||||||||||||||||
Sbjct: 144320 ggagaaagtgggtggtgagca 144300



 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1000   ggagaaagtgggtggtgagca 1020
              |||||||||||||||||||||
Sbjct: 206345 ggagaaagtgggtggtgagca 206325



to top

>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 774     atgaagctgcaaaagctttag 794
               |||||||||||||||||||||
Sbjct: 3903475 atgaagctgcaaaagctttag 3903455



to top

>gb|AC112683.10| Mus musculus chromosome 17, clone RP23-332P1, complete sequence
          Length = 206979

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 759   agtctccaggcacagatgaag 779
             |||||||||||||||||||||
Sbjct: 61335 agtctccaggcacagatgaag 61355



to top

>gb|AC105057.7| Homo sapiens 3 BAC RP11-543P4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 165602

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 298    gtatttgccattgcagatggcgttt 322
              ||||||| |||||||||||||||||
Sbjct: 157911 gtatttgtcattgcagatggcgttt 157887



to top

>gb|AC084358.19| Homo sapiens 12p BAC RP11-418C2 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 169949

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 354   tctgttttctcgagagcttat 374
             |||||||||||||||||||||
Sbjct: 82001 tctgttttctcgagagcttat 82021



to top

>dbj|AB121692.1| Mus musculus peptidylarginine deiminase gene cluster (Padi2, Padi1,
             Padi23, Padi4, Padi6), complete cds
          Length = 240498

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 730   tgatcaagagatccttgctgt 750
             |||||||||||||||||||||
Sbjct: 71771 tgatcaagagatccttgctgt 71791



to top

>emb|BX004772.17| Zebrafish DNA sequence from clone DKEY-15L1 in linkage group 7,
            complete sequence
          Length = 210545

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1105 ttttggtcatgttgtactata 1125
            |||||||||||||||||||||
Sbjct: 3821 ttttggtcatgttgtactata 3801



to top

>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 774     atgaagctgcaaaagctttag 794
               |||||||||||||||||||||
Sbjct: 3866962 atgaagctgcaaaagctttag 3866942



to top

>gb|U61375.1|HSU61375 Human cosmid LL12NC01-N-184C4, ETV6 gene, exons 4 and 5 and partial
            cds
          Length = 39825

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 354  tctgttttctcgagagcttat 374
            |||||||||||||||||||||
Sbjct: 3517 tctgttttctcgagagcttat 3537



to top

>gb|AC151051.2| Mus musculus BAC clone RP24-333M6 from 7, complete sequence
          Length = 196288

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1000  ggagaaagtgggtggtgagca 1020
             |||||||||||||||||||||
Sbjct: 44619 ggagaaagtgggtggtgagca 44599



 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1000   ggagaaagtgggtggtgagca 1020
              |||||||||||||||||||||
Sbjct: 106644 ggagaaagtgggtggtgagca 106624



to top

>gb|AC141895.4| Mus musculus BAC clone RP23-299L22 from 10, complete sequence
          Length = 178358

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1086  aaattcattttcttttccatt 1106
             |||||||||||||||||||||
Sbjct: 67702 aaattcattttcttttccatt 67682



to top

>emb|AL807805.7| Mouse DNA sequence from clone RP23-48K5 on chromosome 4, complete
              sequence
          Length = 183495

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 730    tgatcaagagatccttgctgt 750
              |||||||||||||||||||||
Sbjct: 154731 tgatcaagagatccttgctgt 154711



to top

>emb|AL606926.6| Mouse DNA sequence from clone RP23-231M4 on chromosome 4, complete
             sequence
          Length = 93508

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1079  tgaatagaaattcattttctt 1099
             |||||||||||||||||||||
Sbjct: 92364 tgaatagaaattcattttctt 92344



to top

>gb|M17982.1|MUSGFBPA3 Mouse epidermal growth factor binding protein type 2 gene, exons 3-5
          Length = 1384

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1000 ggagaaagtgggtggtgagca 1020
            |||||||||||||||||||||
Sbjct: 608  ggagaaagtgggtggtgagca 588



to top

>emb|AL607073.15| Mouse DNA sequence from clone RP23-321K1 on chromosome 4, complete
            sequence
          Length = 95219

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1079 tgaatagaaattcattttctt 1099
            |||||||||||||||||||||
Sbjct: 856  tgaatagaaattcattttctt 836


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 230,953,653
Number of extensions: 12915951
Number of successful extensions: 302705
Number of sequences better than 10.0: 39
Number of HSP's gapped: 302701
Number of HSP's successfully gapped: 75
Length of query: 1219
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1196
Effective length of database: 18,503,978,556
Effective search space: 22130758352976
Effective search space used: 22130758352976
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top