ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf31k08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK069538:Os06g0714000 | 779 | 0.0 | 2 | AK064057: | 33 | 0.79 | 3 | Os01g0807400:Os01g0807400 | 31 | 2.3 | 4 | U29176:Os12g0114800 | 30 | 3.9 | 5 | AK119692:Os11g0115100 | 30 | 3.9 | 6 | AK119681:Os12g0114800 | 30 | 3.9 | 7 | AK119677:Os11g0115100 | 30 | 3.9 | 8 | AK104005:Os12g0114800 | 30 | 3.9 | 9 | AK072917:Os12g0114800 | 30 | 3.9 | 10 | AK061314:Os01g0106600 | 30 | 3.9 | 11 | AK060340:Os12g0114800 | 30 | 3.9 | 12 | AK072620:Os10g0400900 | 30 | 5.1 | 13 | AK062191:Os10g0400900 | 30 | 5.1 | 14 | AK061100:Os04g0552300 | 30 | 5.1 | 15 | X83433:Os12g0114800 | 29 | 8.7 |
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>AK069538:Os06g0714000 | Length = 426 Score = 779 bits (2012), Expect = 0.0 Identities = 375/402 (93%), Positives = 385/402 (95%), Gaps = 1/402 (0%) Frame = +2 Query: 176 TVPVRRRCEGTAMGAVTLDLRPGLGVGPFTLGMPISDAFAQIEHQPNIYDVVHVKYFDEE 355 TVPVRRRCEGTAMGA+TLDLRPG GVGPFTLGMPISDAFAQIE QP +YDVVHVKYFDEE Sbjct: 25 TVPVRRRCEGTAMGAITLDLRPGNGVGPFTLGMPISDAFAQIEGQPTLYDVVHVKYFDEE 84 Query: 356 PLKLDFVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQLRYATSLIGGPSTLATFVSVYA 535 PLKLDFVISFPDHGFHLRFDPWSQRLRLIEI+DVKRLQLRYA SLIGGPSTLATFV+VY Sbjct: 85 PLKLDFVISFPDHGFHLRFDPWSQRLRLIEIYDVKRLQLRYAKSLIGGPSTLATFVAVYG 144 Query: 536 LFGPTFPGIYDKERGMYTLFYPGLSFAFPIPSQYTNFFNNGEVADLPLEFPDGTTPVTCR 715 LFGPTFPGIYDKERG+YTLFYPGLSFAFPIPSQYTN F NGEVADLPLEFPDGTTPVTCR Sbjct: 145 LFGPTFPGIYDKERGIYTLFYPGLSFAFPIPSQYTNLFTNGEVADLPLEFPDGTTPVTCR 204 Query: 716 VSIYDSSTDSKVGVGSLMDKAVIPALPAGSLYMEEVHAKLGEELWFTIGGQHIPFGASPQ 895 VSIYDSSTDSKVGVGSLMDKAV+PALPAGSLYMEEVHAKLGEEL FTIGGQHIPFGASPQ Sbjct: 205 VSIYDSSTDSKVGVGSLMDKAVVPALPAGSLYMEEVHAKLGEELLFTIGGQHIPFGASPQ 264 Query: 896 DIWTELGRPCGIHQKQVDQMVIHSASDLRPRTTLCGDYFYNYFSRGIDILFDGQTHKIKK 1075 D+WTELGRPCGIHQKQVDQMVIHSASD RPRTTLCGDYFYNYFSRGIDILFDGQTH+IKK Sbjct: 265 DVWTELGRPCGIHQKQVDQMVIHSASDPRPRTTLCGDYFYNYFSRGIDILFDGQTHRIKK 324 Query: 1076 FVLHTNFPGHSDFNSYMKCNFVIYDAEG-GQQPTGNTSKNCITPRTKWEQVKEILGDCGR 1252 FVLHTNFPGHSDFNSYMKCNFVIYDAE G G+ K+CITPRTKWEQVKEILGDCGR Sbjct: 325 FVLHTNFPGHSDFNSYMKCNFVIYDAEAEGTDQPGSIPKSCITPRTKWEQVKEILGDCGR 384 Query: 1253 AAIQTQGSMNNPFGSTFVYGYQNIAFEVMKNGYIATVTLFQS 1378 AAIQTQGSMNNPFGSTFVYGYQNIAFEVMKNGYIATVTLFQS Sbjct: 385 AAIQTQGSMNNPFGSTFVYGYQNIAFEVMKNGYIATVTLFQS 426
>AK064057: | Length = 239 Score = 32.7 bits (73), Expect = 0.79 Identities = 18/52 (34%), Positives = 28/52 (53%) Frame = -3 Query: 864 PPIVNQSSSPSFACTSSIYRLPAGKAGITALSINDPTPTLLSVELSYIETRH 709 P +V Q SSP+ C+SS+ + + TA+S + ++L EL YI H Sbjct: 72 PAVVPQKSSPTTECSSSVSSMSSSPTA-TAISSSKSPASVLHEELGYIRFLH 122
>Os01g0807400:Os01g0807400 | Length = 261 Score = 31.2 bits (69), Expect = 2.3 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -3 Query: 273 IPRVKGPTPRPGRRSRVTAPMAVPSQRRLTG 181 +PRV+ PTPRP + T P A S R+ G Sbjct: 99 LPRVRRPTPRPSSTASPTPPNAAGSGARVAG 129
>U29176:Os12g0114800 | Length = 99 Score = 30.4 bits (67), Expect = 3.9 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Frame = -3 Query: 909 SVQISCGDAPKGI--CWPPIVNQSSSPSFACTSSIYRLPAGKAGITA 775 S +SCGD I C ++ + SSPS +C S + R GKA +A Sbjct: 5 SAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGV-RTLNGKASSSA 50
>AK119692:Os11g0115100 | Length = 121 Score = 30.4 bits (67), Expect = 3.9 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Frame = -3 Query: 909 SVQISCGDAPKGI--CWPPIVNQSSSPSFACTSSIYRLPAGKAGITA 775 S +SCGD I C ++ + SSPS +C S + R GKA +A Sbjct: 27 SAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGV-RTLNGKASSSA 72
>AK119681:Os12g0114800 | Length = 121 Score = 30.4 bits (67), Expect = 3.9 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Frame = -3 Query: 909 SVQISCGDAPKGI--CWPPIVNQSSSPSFACTSSIYRLPAGKAGITA 775 S +SCGD I C ++ + SSPS +C S + R GKA +A Sbjct: 27 SAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGV-RTLNGKASSSA 72
>AK119677:Os11g0115100 | Length = 121 Score = 30.4 bits (67), Expect = 3.9 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Frame = -3 Query: 909 SVQISCGDAPKGI--CWPPIVNQSSSPSFACTSSIYRLPAGKAGITA 775 S +SCGD I C ++ + SSPS +C S + R GKA +A Sbjct: 27 SAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGV-RTLNGKASSSA 72
>AK104005:Os12g0114800 | Length = 121 Score = 30.4 bits (67), Expect = 3.9 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Frame = -3 Query: 909 SVQISCGDAPKGI--CWPPIVNQSSSPSFACTSSIYRLPAGKAGITA 775 S +SCGD I C ++ + SSPS +C S + R GKA +A Sbjct: 27 SAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGV-RTLNGKASSSA 72
>AK072917:Os12g0114800 | Length = 121 Score = 30.4 bits (67), Expect = 3.9 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Frame = -3 Query: 909 SVQISCGDAPKGI--CWPPIVNQSSSPSFACTSSIYRLPAGKAGITA 775 S +SCGD I C ++ + SSPS +C S + R GKA +A Sbjct: 27 SAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGV-RTLNGKASSSA 72
>AK061314:Os01g0106600 | Length = 292 Score = 30.4 bits (67), Expect = 3.9 Identities = 21/63 (33%), Positives = 26/63 (41%) Frame = -1 Query: 956 PFGPPASDGYRMDDPTRSRYPVAMLRKEYAGPQ**TKALHQALHVLPPYIGCPRVRQE*P 777 P PP+S YR P SR+P + A P ++ LH PP R E P Sbjct: 31 PPPPPSSSRYRPPSPPSSRHPHPTIPAARAAPP--LGPTNRRLHQQPPPPASRDGRHEPP 88 Query: 776 PYP 768 P P Sbjct: 89 PKP 91
>AK060340:Os12g0114800 | Length = 121 Score = 30.4 bits (67), Expect = 3.9 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Frame = -3 Query: 909 SVQISCGDAPKGI--CWPPIVNQSSSPSFACTSSIYRLPAGKAGITA 775 S +SCGD I C ++ + SSPS +C S + R GKA +A Sbjct: 27 SAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGV-RTLNGKASSSA 72
>AK072620:Os10g0400900 | Length = 725 Score = 30.0 bits (66), Expect = 5.1 Identities = 22/81 (27%), Positives = 37/81 (45%) Frame = +2 Query: 350 EEPLKLDFVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQLRYATSLIGGPSTLATFVSV 529 E L D+V + G+HL ++++ ++I + V L+ A I LA +S Sbjct: 644 ERGLHHDYVTALLQDGYHLEALRYARKYKVITVQPVLFLEKAVA---INSAQNLAAMLSF 700 Query: 530 YALFGPTFPGIYDKERGMYTL 592 ++ F PTF D R + L Sbjct: 701 FSEFTPTFKTTSDYGRYRHIL 721
>AK062191:Os10g0400900 | Length = 423 Score = 30.0 bits (66), Expect = 5.1 Identities = 22/81 (27%), Positives = 37/81 (45%) Frame = +2 Query: 350 EEPLKLDFVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQLRYATSLIGGPSTLATFVSV 529 E L D+V + G+HL ++++ ++I + V L+ A I LA +S Sbjct: 342 ERGLHHDYVTALLQDGYHLEALRYARKYKVITVQPVLFLEKAVA---INSAQNLAAMLSF 398 Query: 530 YALFGPTFPGIYDKERGMYTL 592 ++ F PTF D R + L Sbjct: 399 FSEFTPTFKTTSDYGRYRHIL 419
>AK061100:Os04g0552300 | Length = 217 Score = 30.0 bits (66), Expect = 5.1 Identities = 18/38 (47%), Positives = 23/38 (60%) Frame = -3 Query: 819 SSIYRLPAGKAGITALSINDPTPTLLSVELSYIETRHV 706 S +Y LP G G TALS TP ++SV S +E RH+ Sbjct: 8 SDVYALPCGDDGTTALS----TPVVVSVLASLLE-RHI 40
>X83433:Os12g0114800 | Length = 93 Score = 29.3 bits (64), Expect = 8.7 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Frame = -3 Query: 900 ISCGDAPKGI--CWPPIVNQSSSPSFACTSSIYRLPAGKAGITA 775 +SCGD I C ++ + SSPS +C S + R GKA +A Sbjct: 2 VSCGDVTSSIAPCLSYVMGRESSPSSSCCSGV-RTLNGKASSSA 44 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 49,851,196 Number of extensions: 1247521 Number of successful extensions: 3478 Number of sequences better than 10.0: 15 Number of HSP's gapped: 3474 Number of HSP's successfully gapped: 15 Length of query: 559 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 453 Effective length of database: 11,155,509 Effective search space: 5053445577 Effective search space used: 5053445577 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
