| Clone Name | FLbaf31k08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001065105.1| Oryza sativa (japonica cultivar-group) Os06g0714000 (Os06g0714000) mRNA, complete cds Length = 1841 Score = 1009 bits (509), Expect = 0.0 Identities = 920/1057 (87%) Strand = Plus / Plus Query: 101 gcgatgcagacgcagaggtcaccggcgatggtggggggagggcccgggtcggcggtcggg 160 ||||||||| |||| || || ||||||||||||||||| || || | ||| |||||| Sbjct: 146 gcgatgcaggcgcacagatcgccggcgatggtggggggcggcggcgcgggggccgtcggg 205 Query: 161 tcgccgtccccggcgacggtgccggtgaggcggcgctgcgagggcacggccatgggagcc 220 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 206 ccgccgtcgccggcgacggtgccggtgaggcggcgctgcgagggcacggccatgggggcc 265 Query: 221 gtcaccctcgacctccgccccggcctcggcgtcggccccttcaccctcgggatgccgatt 280 |||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 266 atcacgctcgacctccgccccggcaacggcgtcgggcccttcaccctcgggatgccgatt 325 Query: 281 tccgatgcatttgcgcagattgaacaccagccaaacatttacgatgttgtccacgtgaag 340 |||||||| || |||||||| || |||||||| | ||||| ||||||||||||||| Sbjct: 326 tccgatgcgttcgcgcagatagagggccagccaacactctacgacgttgtccacgtgaag 385 Query: 341 tacttcgatgaggagcctctaaagttggactttgtcataagctttccggatcacgggttt 400 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| Sbjct: 386 tacttcgatgaggagcctctaaagttggattttgtcataagctttcctgaccatgggttc 445 Query: 401 cacttgcgctttgatccttggtcgcagaggctccggctcattgaaatttttgatgttaag 460 ||| ||||||| ||||||||||| |||||||| || |||||||| || | ||| || || Sbjct: 446 cacctgcgcttcgatccttggtcacagaggcttcgtctcattgagatctatgacgtgaaa 505 Query: 461 agactgcaattgcgttacgcaacgtctttaattggcggtccatcgacgttagccactttt 520 ||||||||| |||| || |||| ||| |||||||| || ||||| || |||||||||||| Sbjct: 506 agactgcaactgcgatatgcaaagtccttaattggtggcccatcaacattagccactttt 565 Query: 521 gtgtctgtttatgctctattcggaccaactttccctgggatatatgacaaagagaggggc 580 ||| ||||||||| |||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 566 gtggctgtttatggattattcggacctactttcccgggtatatatgacaaagagaggggc 625 Query: 581 atgtataccctcttctatccaggcttatcatttgcattccctatccccagtcaatataca 640 || || ||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 626 atttacaccctcttctatccagggttatcctttgcattccctatccccagtcaatataca 685 Query: 641 aatttcttcaacaatggggaagtggcagatttgcccctggagtttcccgatggaacaact 700 ||||| || | |||||||||||||||||||||||| ||||| ||||| || ||||||||| Sbjct: 686 aatttgtttaccaatggggaagtggcagatttgcctctggaatttcctgacggaacaact 745 Query: 701 ccggttacgtgccgtgtttctatatatgatagctcaacagatagcaaagttggtgttggg 760 || ||||| ||||| |||||||||||||| || ||||| |||||||| ||||| ||||| Sbjct: 746 cctgttacttgccgggtttctatatatgacagttcaacggatagcaaggttggggttgga 805 Query: 761 tcattgatggataaggcggttattcctgccttacccgcgggcagcctatatatggaggaa 820 ||| |||||||||| || ||| ||||||| ||||| || |||||||| || ||||||||| Sbjct: 806 tcactgatggataaagcagttgttcctgcattacctgcaggcagcctgtacatggaggaa 865 Query: 821 gtacatgcaaagcttggtgaagagctttggttcactattgggggccagcatattcctttc 880 || ||||||||||||||||||||||||| |||||| || || || || |||||||||||| Sbjct: 866 gtgcatgcaaagcttggtgaagagcttttgttcacgataggcgggcaacatattcctttc 925 Query: 881 ggagcatcgccacaggatatctggaccgagttgggtcgtccatgcggtatccatcagaag 940 || ||||| || ||||| | ||||| ||||||||||||||||| || ||||| |||||| Sbjct: 926 ggtgcatcaccgcaggacgtgtggactgagttgggtcgtccatgtggcatccaccagaag 985 Query: 941 caggtggaccaaatggttatacactctgcatccgacctccgtcctcggactactctttgt 1000 ||||| ||||| ||||| ||||| || ||||| |||| ||| |||||||| ||||||||| Sbjct: 986 caggttgaccagatggtaatacattcagcatcagacccccgccctcggacaactctttgt 1045 Query: 1001 ggagactacttctacaactatttctcacgtggcatagatatcttatttgatggtcagact 1060 || || || || |||||||| ||||| ||||| || ||||||||||||||||| ||||| Sbjct: 1046 ggggattatttttacaactacttctctcgtggtattgatatcttatttgatgggcagaca 1105 Query: 1061 cataagataaagaagtttgttttacatacaaacttccctggtcattctgatttcaattcg 1120 || | ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1106 cacaggataaagaagtttgttttacacacaaacttccctggtcattcagatttcaattcc 1165 Query: 1121 tacatgaaatgcaactttgttatctatgatgctgaag 1157 || ||||| || |||||||||||||||||||| |||| Sbjct: 1166 tatatgaagtgtaactttgttatctatgatgccgaag 1202 Score = 206 bits (104), Expect = 2e-49 Identities = 173/196 (88%) Strand = Plus / Plus Query: 1187 aagaattgcataacaccccgaacaaagtgggaacaagtcaaggagatccttggcgactgc 1246 |||| ||||||||| || || |||||||||||||||||||||||||||||||| || || Sbjct: 1235 aagagttgcataacgcctcgcacaaagtgggaacaagtcaaggagatccttggtgattgt 1294 Query: 1247 ggtcgagcagcaatccagacacagggctcgatgaataacccgtttggatcaactttcgtc 1306 |||||||||||||||||||| || ||||| |||||||| || ||||| |||||||| ||| Sbjct: 1295 ggtcgagcagcaatccagacgcaaggctccatgaataatccatttgggtcaacttttgtc 1354 Query: 1307 tatggataccaaaatattgctttcgaggtgatgaaaaatggatatatcgccaccgttacc 1366 |||||||| || ||||||||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 1355 tatggatatcagaatattgcttttgaggtcatgaaaaatggatatattgcaactgttacc 1414 Query: 1367 ctcttccagtcatgag 1382 ||||| || ||||||| Sbjct: 1415 ctctttcaatcatgag 1430 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Plus Query: 7 ggagtagacgcaagcccacgcgaa 30 |||||||||||||||||||||||| Sbjct: 31 ggagtagacgcaagcccacgcgaa 54
>dbj|AK069538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020A02, full insert sequence Length = 1842 Score = 1001 bits (505), Expect = 0.0 Identities = 919/1057 (86%) Strand = Plus / Plus Query: 101 gcgatgcagacgcagaggtcaccggcgatggtggggggagggcccgggtcggcggtcggg 160 ||||||||| |||| || || ||||||||||||||||| || || | ||| |||||| Sbjct: 147 gcgatgcaggcgcacagatcgccggcgatggtggggggcggcggcgcgggggccgtcggg 206 Query: 161 tcgccgtccccggcgacggtgccggtgaggcggcgctgcgagggcacggccatgggagcc 220 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 207 ccgccgtcgccggcgacggtgccggtgaggcggcgctgcgagggcacggccatgggggcc 266 Query: 221 gtcaccctcgacctccgccccggcctcggcgtcggccccttcaccctcgggatgccgatt 280 |||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 267 atcacgctcgacctccgccccggcaacggcgtcgggcccttcaccctcgggatgccgatt 326 Query: 281 tccgatgcatttgcgcagattgaacaccagccaaacatttacgatgttgtccacgtgaag 340 |||| ||| || |||||||| || |||||||| | ||||| ||||||||||||||| Sbjct: 327 tccggtgcgttcgcgcagatagagggccagccaacactctacgacgttgtccacgtgaag 386 Query: 341 tacttcgatgaggagcctctaaagttggactttgtcataagctttccggatcacgggttt 400 ||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| Sbjct: 387 tacttcgatgaggagcctctaaagttggattttgtcataagctttcctgaccatgggttc 446 Query: 401 cacttgcgctttgatccttggtcgcagaggctccggctcattgaaatttttgatgttaag 460 ||| ||||||| ||||||||||| |||||||| || |||||||| || | ||| || || Sbjct: 447 cacctgcgcttcgatccttggtcacagaggcttcgtctcattgagatctatgacgtgaaa 506 Query: 461 agactgcaattgcgttacgcaacgtctttaattggcggtccatcgacgttagccactttt 520 ||||||||| |||| || |||| ||| |||||||| || ||||| || |||||||||||| Sbjct: 507 agactgcaactgcgatatgcaaagtccttaattggtggcccatcaacattagccactttt 566 Query: 521 gtgtctgtttatgctctattcggaccaactttccctgggatatatgacaaagagaggggc 580 ||| ||||||||| |||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 567 gtggctgtttatggattattcggacctactttcccgggtatatatgacaaagagaggggc 626 Query: 581 atgtataccctcttctatccaggcttatcatttgcattccctatccccagtcaatataca 640 || || ||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 627 atttacaccctcttctatccagggttatcctttgcattccctatccccagtcaatataca 686 Query: 641 aatttcttcaacaatggggaagtggcagatttgcccctggagtttcccgatggaacaact 700 ||||| || | |||||||||||||||||||||||| ||||| ||||| || ||||||||| Sbjct: 687 aatttgtttaccaatggggaagtggcagatttgcctctggaatttcctgacggaacaact 746 Query: 701 ccggttacgtgccgtgtttctatatatgatagctcaacagatagcaaagttggtgttggg 760 || ||||| ||||| |||||||||||||| || ||||| |||||||| ||||| ||||| Sbjct: 747 cctgttacttgccgggtttctatatatgacagttcaacggatagcaaggttggggttgga 806 Query: 761 tcattgatggataaggcggttattcctgccttacccgcgggcagcctatatatggaggaa 820 ||| |||||||||| || ||| ||||||| ||||| || |||||||| || ||||||||| Sbjct: 807 tcactgatggataaagcagttgttcctgcattacctgcaggcagcctgtacatggaggaa 866 Query: 821 gtacatgcaaagcttggtgaagagctttggttcactattgggggccagcatattcctttc 880 || ||||||||||||||||||||||||| |||||| || || || || |||||||||||| Sbjct: 867 gtgcatgcaaagcttggtgaagagcttttgttcacgataggcgggcaacatattcctttc 926 Query: 881 ggagcatcgccacaggatatctggaccgagttgggtcgtccatgcggtatccatcagaag 940 || ||||| || ||||| | ||||| ||||||||||||||||| || ||||| |||||| Sbjct: 927 ggtgcatcaccgcaggacgtgtggactgagttgggtcgtccatgtggcatccaccagaag 986 Query: 941 caggtggaccaaatggttatacactctgcatccgacctccgtcctcggactactctttgt 1000 ||||| ||||| ||||| ||||| || ||||| |||| ||| |||||||| ||||||||| Sbjct: 987 caggttgaccagatggtaatacattcagcatcagacccccgccctcggacaactctttgt 1046 Query: 1001 ggagactacttctacaactatttctcacgtggcatagatatcttatttgatggtcagact 1060 || || || || |||||||| ||||| ||||| || ||||||||||||||||| ||||| Sbjct: 1047 ggggattatttttacaactacttctctcgtggtattgatatcttatttgatgggcagaca 1106 Query: 1061 cataagataaagaagtttgttttacatacaaacttccctggtcattctgatttcaattcg 1120 || | ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1107 cacaggataaagaagtttgttttacacacaaacttccctggtcattcagatttcaattcc 1166 Query: 1121 tacatgaaatgcaactttgttatctatgatgctgaag 1157 || ||||| || |||||||||||||||||||| |||| Sbjct: 1167 tatatgaagtgtaactttgttatctatgatgccgaag 1203 Score = 206 bits (104), Expect = 2e-49 Identities = 173/196 (88%) Strand = Plus / Plus Query: 1187 aagaattgcataacaccccgaacaaagtgggaacaagtcaaggagatccttggcgactgc 1246 |||| ||||||||| || || |||||||||||||||||||||||||||||||| || || Sbjct: 1236 aagagttgcataacgcctcgcacaaagtgggaacaagtcaaggagatccttggtgattgt 1295 Query: 1247 ggtcgagcagcaatccagacacagggctcgatgaataacccgtttggatcaactttcgtc 1306 |||||||||||||||||||| || ||||| |||||||| || ||||| |||||||| ||| Sbjct: 1296 ggtcgagcagcaatccagacgcaaggctccatgaataatccatttgggtcaacttttgtc 1355 Query: 1307 tatggataccaaaatattgctttcgaggtgatgaaaaatggatatatcgccaccgttacc 1366 |||||||| || ||||||||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 1356 tatggatatcagaatattgcttttgaggtcatgaaaaatggatatattgcaactgttacc 1415 Query: 1367 ctcttccagtcatgag 1382 ||||| || ||||||| Sbjct: 1416 ctctttcaatcatgag 1431 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Plus Query: 7 ggagtagacgcaagcccacgcgaa 30 |||||||||||||||||||||||| Sbjct: 32 ggagtagacgcaagcccacgcgaa 55
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 178 bits (90), Expect = 4e-41 Identities = 150/170 (88%) Strand = Plus / Minus Query: 101 gcgatgcagacgcagaggtcaccggcgatggtggggggagggcccgggtcggcggtcggg 160 ||||||||| |||| || || ||||||||||||||||| || || | ||| |||||| Sbjct: 29762956 gcgatgcaggcgcacagatcgccggcgatggtggggggcggcggcgcgggggccgtcggg 29762897 Query: 161 tcgccgtccccggcgacggtgccggtgaggcggcgctgcgagggcacggccatgggagcc 220 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 29762896 ccgccgtcgccggcgacggtgccggtgaggcggcgctgcgagggcacggccatgggggcc 29762837 Query: 221 gtcaccctcgacctccgccccggcctcggcgtcggccccttcaccctcgg 270 |||| |||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 29762836 atcacgctcgacctccgccccggcaacggcgtcgggcccttcaccctcgg 29762787 Score = 159 bits (80), Expect = 4e-35 Identities = 149/172 (86%) Strand = Plus / Minus Query: 661 agtggcagatttgcccctggagtttcccgatggaacaactccggttacgtgccgtgtttc 720 ||||||||||||||| ||||| ||||| || ||||||||||| ||||| ||||| ||||| Sbjct: 29761408 agtggcagatttgcctctggaatttcctgacggaacaactcctgttacttgccgggtttc 29761349 Query: 721 tatatatgatagctcaacagatagcaaagttggtgttgggtcattgatggataaggcggt 780 ||||||||| || ||||| |||||||| ||||| ||||| ||| |||||||||| || || Sbjct: 29761348 tatatatgacagttcaacggatagcaaggttggggttggatcactgatggataaagcagt 29761289 Query: 781 tattcctgccttacccgcgggcagcctatatatggaggaagtacatgcaaag 832 | ||||||| ||||| || |||||||| || ||||||||||| ||||||||| Sbjct: 29761288 tgttcctgcattacctgcaggcagcctgtacatggaggaagtgcatgcaaag 29761237 Score = 129 bits (65), Expect = 4e-26 Identities = 86/93 (92%) Strand = Plus / Minus Query: 1066 gataaagaagtttgttttacatacaaacttccctggtcattctgatttcaattcgtacat 1125 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| || || Sbjct: 29759992 gataaagaagtttgttttacacacaaacttccctggtcattcagatttcaattcctatat 29759933 Query: 1126 gaaatgcaactttgttatctatgatgctgaagg 1158 ||| || |||||||||||||||||||| ||||| Sbjct: 29759932 gaagtgtaactttgttatctatgatgccgaagg 29759900 Score = 117 bits (59), Expect = 1e-22 Identities = 92/103 (89%) Strand = Plus / Minus Query: 500 ccatcgacgttagccacttttgtgtctgtttatgctctattcggaccaactttccctggg 559 ||||| || ||||||||||||||| ||||||||| |||||||||| |||||||| || Sbjct: 29761786 ccatcaacattagccacttttgtggctgtttatggattattcggacctactttcccgggt 29761727 Query: 560 atatatgacaaagagaggggcatgtataccctcttctatccag 602 ||||||||||||||||||||||| || |||||||||||||||| Sbjct: 29761726 atatatgacaaagagaggggcatttacaccctcttctatccag 29761684 Score = 115 bits (58), Expect = 5e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 1227 aggagatccttggcgactgcggtcgagcagcaatccagacacagggctcgatgaataacc 1286 ||||||||||||| || || |||||||||||||||||||| || ||||| |||||||| | Sbjct: 29759323 aggagatccttggtgattgtggtcgagcagcaatccagacgcaaggctccatgaataatc 29759264 Query: 1287 cgtttggatcaactttcgtctatggataccaaaatattgctttcgaggtg 1336 | ||||| |||||||| ||||||||||| || ||||||||||| |||||| Sbjct: 29759263 catttgggtcaacttttgtctatggatatcagaatattgcttttgaggtg 29759214 Score = 89.7 bits (45), Expect = 3e-14 Identities = 96/113 (84%) Strand = Plus / Minus Query: 941 caggtggaccaaatggttatacactctgcatccgacctccgtcctcggactactctttgt 1000 ||||| ||||| ||||| ||||| || ||||| |||| ||| |||||||| ||||||||| Sbjct: 29760223 caggttgaccagatggtaatacattcagcatcagacccccgccctcggacaactctttgt 29760164 Query: 1001 ggagactacttctacaactatttctcacgtggcatagatatcttatttgatgg 1053 || || || || |||||||| ||||| ||||| || ||||||||||||||||| Sbjct: 29760163 ggggattatttttacaactacttctctcgtggtattgatatcttatttgatgg 29760111 Score = 89.7 bits (45), Expect = 3e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 351 aggagcctctaaagttggactttgtcataagctttccggatcacgggtttcacttgcgct 410 ||||||||||||||||||| ||||||||||||||||| || || ||||| ||| |||||| Sbjct: 29762420 aggagcctctaaagttggattttgtcataagctttcctgaccatgggttccacctgcgct 29762361 Query: 411 ttgatccttggtc 423 | ||||||||||| Sbjct: 29762360 tcgatccttggtc 29762348 Score = 83.8 bits (42), Expect = 2e-12 Identities = 54/58 (93%) Strand = Plus / Minus Query: 605 ttatcatttgcattccctatccccagtcaatatacaaatttcttcaacaatggggaag 662 ||||| ||||||||||||||||||||||||||||||||||| || | ||||||||||| Sbjct: 29761575 ttatcctttgcattccctatccccagtcaatatacaaatttgtttaccaatggggaag 29761518 Score = 81.8 bits (41), Expect = 7e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 269 gggatgccgatttccgatgcatttgcgcagattgaacaccagccaaacatttacgatgtt 328 |||||||||||||||||||| || |||||||| || |||||||| | ||||| ||| Sbjct: 29762590 gggatgccgatttccgatgcgttcgcgcagatagagggccagccaacactctacgacgtt 29762531 Query: 329 gtccacgtgaagtacttcgatgagg 353 ||||||||||||||||||||||||| Sbjct: 29762530 gtccacgtgaagtacttcgatgagg 29762506 Score = 60.0 bits (30), Expect = 3e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 831 agcttggtgaagagctttggttcactattgggggccagcatattcctttcggagcatc 888 |||||||||||||||||| |||||| || || || || |||||||||||||| ||||| Sbjct: 29761023 agcttggtgaagagcttttgttcacgataggcgggcaacatattcctttcggtgcatc 29760966 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 902 tggaccgagttgggtcgtccatgcggtatccatcagaagcaggt 945 ||||| ||||||||||||||||| || ||||| ||||||||||| Sbjct: 29760848 tggactgagttgggtcgtccatgtggcatccaccagaagcaggt 29760805 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Minus Query: 1332 aggtgatgaaaaatggatatatcgccaccgttaccctcttccagtcatgag 1382 |||| ||||||||||||||||| || || ||||||||||| || ||||||| Sbjct: 29759116 aggtcatgaaaaatggatatattgcaactgttaccctctttcaatcatgag 29759066 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Minus Query: 1187 aagaattgcataacaccccgaacaaagtgggaacaagtcaagg 1229 |||| ||||||||| || || |||||||||||||||||||||| Sbjct: 29759792 aagagttgcataacgcctcgcacaaagtgggaacaagtcaagg 29759750 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Minus Query: 7 ggagtagacgcaagcccacgcgaa 30 |||||||||||||||||||||||| Sbjct: 29763071 ggagtagacgcaagcccacgcgaa 29763048 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 cctccgccccggcctcggcgtcggc 256 ||||||||||||||||||| ||||| Sbjct: 6759537 cctccgccccggcctcggcctcggc 6759561
>dbj|AP004678.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_F03 Length = 110783 Score = 178 bits (90), Expect = 4e-41 Identities = 150/170 (88%) Strand = Plus / Minus Query: 101 gcgatgcagacgcagaggtcaccggcgatggtggggggagggcccgggtcggcggtcggg 160 ||||||||| |||| || || ||||||||||||||||| || || | ||| |||||| Sbjct: 61086 gcgatgcaggcgcacagatcgccggcgatggtggggggcggcggcgcgggggccgtcggg 61027 Query: 161 tcgccgtccccggcgacggtgccggtgaggcggcgctgcgagggcacggccatgggagcc 220 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 61026 ccgccgtcgccggcgacggtgccggtgaggcggcgctgcgagggcacggccatgggggcc 60967 Query: 221 gtcaccctcgacctccgccccggcctcggcgtcggccccttcaccctcgg 270 |||| |||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 60966 atcacgctcgacctccgccccggcaacggcgtcgggcccttcaccctcgg 60917 Score = 159 bits (80), Expect = 4e-35 Identities = 149/172 (86%) Strand = Plus / Minus Query: 661 agtggcagatttgcccctggagtttcccgatggaacaactccggttacgtgccgtgtttc 720 ||||||||||||||| ||||| ||||| || ||||||||||| ||||| ||||| ||||| Sbjct: 59538 agtggcagatttgcctctggaatttcctgacggaacaactcctgttacttgccgggtttc 59479 Query: 721 tatatatgatagctcaacagatagcaaagttggtgttgggtcattgatggataaggcggt 780 ||||||||| || ||||| |||||||| ||||| ||||| ||| |||||||||| || || Sbjct: 59478 tatatatgacagttcaacggatagcaaggttggggttggatcactgatggataaagcagt 59419 Query: 781 tattcctgccttacccgcgggcagcctatatatggaggaagtacatgcaaag 832 | ||||||| ||||| || |||||||| || ||||||||||| ||||||||| Sbjct: 59418 tgttcctgcattacctgcaggcagcctgtacatggaggaagtgcatgcaaag 59367 Score = 129 bits (65), Expect = 4e-26 Identities = 86/93 (92%) Strand = Plus / Minus Query: 1066 gataaagaagtttgttttacatacaaacttccctggtcattctgatttcaattcgtacat 1125 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| || || Sbjct: 58122 gataaagaagtttgttttacacacaaacttccctggtcattcagatttcaattcctatat 58063 Query: 1126 gaaatgcaactttgttatctatgatgctgaagg 1158 ||| || |||||||||||||||||||| ||||| Sbjct: 58062 gaagtgtaactttgttatctatgatgccgaagg 58030 Score = 117 bits (59), Expect = 1e-22 Identities = 92/103 (89%) Strand = Plus / Minus Query: 500 ccatcgacgttagccacttttgtgtctgtttatgctctattcggaccaactttccctggg 559 ||||| || ||||||||||||||| ||||||||| |||||||||| |||||||| || Sbjct: 59916 ccatcaacattagccacttttgtggctgtttatggattattcggacctactttcccgggt 59857 Query: 560 atatatgacaaagagaggggcatgtataccctcttctatccag 602 ||||||||||||||||||||||| || |||||||||||||||| Sbjct: 59856 atatatgacaaagagaggggcatttacaccctcttctatccag 59814 Score = 115 bits (58), Expect = 5e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 1227 aggagatccttggcgactgcggtcgagcagcaatccagacacagggctcgatgaataacc 1286 ||||||||||||| || || |||||||||||||||||||| || ||||| |||||||| | Sbjct: 57453 aggagatccttggtgattgtggtcgagcagcaatccagacgcaaggctccatgaataatc 57394 Query: 1287 cgtttggatcaactttcgtctatggataccaaaatattgctttcgaggtg 1336 | ||||| |||||||| ||||||||||| || ||||||||||| |||||| Sbjct: 57393 catttgggtcaacttttgtctatggatatcagaatattgcttttgaggtg 57344 Score = 89.7 bits (45), Expect = 3e-14 Identities = 96/113 (84%) Strand = Plus / Minus Query: 941 caggtggaccaaatggttatacactctgcatccgacctccgtcctcggactactctttgt 1000 ||||| ||||| ||||| ||||| || ||||| |||| ||| |||||||| ||||||||| Sbjct: 58353 caggttgaccagatggtaatacattcagcatcagacccccgccctcggacaactctttgt 58294 Query: 1001 ggagactacttctacaactatttctcacgtggcatagatatcttatttgatgg 1053 || || || || |||||||| ||||| ||||| || ||||||||||||||||| Sbjct: 58293 ggggattatttttacaactacttctctcgtggtattgatatcttatttgatgg 58241 Score = 89.7 bits (45), Expect = 3e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 351 aggagcctctaaagttggactttgtcataagctttccggatcacgggtttcacttgcgct 410 ||||||||||||||||||| ||||||||||||||||| || || ||||| ||| |||||| Sbjct: 60550 aggagcctctaaagttggattttgtcataagctttcctgaccatgggttccacctgcgct 60491 Query: 411 ttgatccttggtc 423 | ||||||||||| Sbjct: 60490 tcgatccttggtc 60478 Score = 83.8 bits (42), Expect = 2e-12 Identities = 54/58 (93%) Strand = Plus / Minus Query: 605 ttatcatttgcattccctatccccagtcaatatacaaatttcttcaacaatggggaag 662 ||||| ||||||||||||||||||||||||||||||||||| || | ||||||||||| Sbjct: 59705 ttatcctttgcattccctatccccagtcaatatacaaatttgtttaccaatggggaag 59648 Score = 81.8 bits (41), Expect = 7e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 269 gggatgccgatttccgatgcatttgcgcagattgaacaccagccaaacatttacgatgtt 328 |||||||||||||||||||| || |||||||| || |||||||| | ||||| ||| Sbjct: 60720 gggatgccgatttccgatgcgttcgcgcagatagagggccagccaacactctacgacgtt 60661 Query: 329 gtccacgtgaagtacttcgatgagg 353 ||||||||||||||||||||||||| Sbjct: 60660 gtccacgtgaagtacttcgatgagg 60636 Score = 60.0 bits (30), Expect = 3e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 831 agcttggtgaagagctttggttcactattgggggccagcatattcctttcggagcatc 888 |||||||||||||||||| |||||| || || || || |||||||||||||| ||||| Sbjct: 59153 agcttggtgaagagcttttgttcacgataggcgggcaacatattcctttcggtgcatc 59096 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 902 tggaccgagttgggtcgtccatgcggtatccatcagaagcaggt 945 ||||| ||||||||||||||||| || ||||| ||||||||||| Sbjct: 58978 tggactgagttgggtcgtccatgtggcatccaccagaagcaggt 58935 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Minus Query: 1332 aggtgatgaaaaatggatatatcgccaccgttaccctcttccagtcatgag 1382 |||| ||||||||||||||||| || || ||||||||||| || ||||||| Sbjct: 57246 aggtcatgaaaaatggatatattgcaactgttaccctctttcaatcatgag 57196 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Minus Query: 1187 aagaattgcataacaccccgaacaaagtgggaacaagtcaagg 1229 |||| ||||||||| || || |||||||||||||||||||||| Sbjct: 57922 aagagttgcataacgcctcgcacaaagtgggaacaagtcaagg 57880 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Minus Query: 7 ggagtagacgcaagcccacgcgaa 30 |||||||||||||||||||||||| Sbjct: 61201 ggagtagacgcaagcccacgcgaa 61178
>gb|AY111872.1| Zea mays CL40592_-1 mRNA sequence Length = 610 Score = 111 bits (56), Expect = 8e-21 Identities = 92/104 (88%) Strand = Plus / Minus Query: 1055 cagactcataagataaagaagtttgttttacatacaaacttccctggtcattctgatttc 1114 ||||| |||| |||||||||||||||||| ||||||||||||||||| || || |||||| Sbjct: 609 cagacacataggataaagaagtttgttttgcatacaaacttccctggccactcagatttc 550 Query: 1115 aattcgtacatgaaatgcaactttgttatctatgatgctgaagg 1158 ||||| || | |||||||||||||||||| || || |||||||| Sbjct: 549 aattcatataagaaatgcaactttgttatatacgacgctgaagg 506 Score = 44.1 bits (22), Expect = 1.6 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1192 ttgcataacaccccgaacaaagtgggaacaagtcaagg 1229 |||||||||||| | ||||| |||||||||||||||| Sbjct: 390 ttgcataacacctagtacaaaatgggaacaagtcaagg 353
>gb|AY109848.1| Zea mays CL40592_-2 mRNA sequence Length = 671 Score = 107 bits (54), Expect = 1e-19 Identities = 130/157 (82%) Strand = Plus / Minus Query: 1227 aggagatccttggcgactgcggtcgagcagcaatccagacacagggctcgatgaataacc 1286 |||||||||| || ||||| || ||||| |||||||||||||| ||||| ||||| || | Sbjct: 502 aggagatcctcggtgactgtggccgagctgcaatccagacacaaggctccatgaacaatc 443 Query: 1287 cgtttggatcaactttcgtctatggataccaaaatattgctttcgaggtgatgaaaaatg 1346 | |||||||||||||| || ||||| || || ||||| ||||||||||||||| | Sbjct: 442 catttggatcaacttttgtatatggttatcagaatatcgctttcgaggtgatgnnnnncg 383 Query: 1347 gatatatcgccaccgttaccctcttccagtcatgagt 1383 ||||||| || || || ||||||||||| |||||||| Sbjct: 382 gatatattgcaactgtcaccctcttccaatcatgagt 346
>emb|CR954188.2| Medicago truncatula chromosome 5 clone mth2-193f16, COMPLETE SEQUENCE Length = 106631 Score = 107 bits (54), Expect = 1e-19 Identities = 84/94 (89%) Strand = Plus / Plus Query: 1054 tcagactcataagataaagaagtttgttttacatacaaacttccctggtcattctgattt 1113 ||||||||| ||||| ||||||||||| |||||||| |||| ||| |||||| ||||||| Sbjct: 65847 tcagactcacaagattaagaagtttgtgttacatactaactaccccggtcatgctgattt 65906 Query: 1114 caattcgtacatgaaatgcaactttgttatctat 1147 ||||| |||||||||||||||||||| |||||| Sbjct: 65907 taattcttacatgaaatgcaactttgtcatctat 65940 Score = 61.9 bits (31), Expect = 7e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 678 tggagtttcccgatggaacaactccggttacgtgccgtgtttctatatatgatag 732 |||||||||| ||||| ||||| || ||||| ||||| ||||||||||||||||| Sbjct: 64597 tggagtttcctgatgggacaacaccagttacatgccgcgtttctatatatgatag 64651 Score = 44.1 bits (22), Expect = 1.6 Identities = 91/114 (79%) Strand = Plus / Plus Query: 940 gcaggtggaccaaatggttatacactctgcatccgacctccgtcctcggactactctttg 999 |||||| || |||||||||||||| ||||| || || || || || ||||| ||| | || Sbjct: 65646 gcaggtagatcaaatggttatacattctgcctctgatcttcggccacggacaactatctg 65705 Query: 1000 tggagactacttctacaactatttctcacgtggcatagatatcttatttgatgg 1053 |||||| ||||| || || ||||| | ||||| | || |||||||||||||| Sbjct: 65706 tggagattacttttataattattttactcgtggtctggacatcttatttgatgg 65759 Score = 44.1 bits (22), Expect = 1.6 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1282 taacccgtttggatcaactttcgtctatggataccaaaatattgctttcgaggt 1335 |||||| ||||| || ||| | || |||||||| |||||||||||||| ||||| Sbjct: 66399 taacccatttggttctactcttgtatatggatatcaaaatattgcttttgaggt 66452
>gb|AC189627.1| Brassica rapa subsp. pekinensis clone KBrS001M03, complete sequence Length = 115604 Score = 67.9 bits (34), Expect = 1e-07 Identities = 73/86 (84%) Strand = Plus / Plus Query: 1252 agcagcaatccagacacagggctcgatgaataacccgtttggatcaactttcgtctatgg 1311 ||||||||| |||||||||||||||| || ||||| |||||||| || | ||||||||| Sbjct: 34486 agcagcaatacagacacagggctcgacgagcaacccttttggatcgacatacgtctatgg 34545 Query: 1312 ataccaaaatattgctttcgaggtga 1337 || || ||| ||||||| ||||||| Sbjct: 34546 ctatcagaatgttgcttttgaggtga 34571 Score = 56.0 bits (28), Expect = 4e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 1070 aagaagtttgttttacatacaaacttccctggtcattctgatttcaattcgtacatgaaa 1129 |||||||||||| | || || |||| ||||||||| |||||||||| || ||||| || Sbjct: 33948 aagaagtttgttcttcacaccaactatcctggtcatgctgatttcaactcatacataaag 34007 Query: 1130 tgcaactttgttatct 1145 ||||||||||| |||| Sbjct: 34008 tgcaactttgtgatct 34023 Score = 46.1 bits (23), Expect = 0.41 Identities = 35/39 (89%) Strand = Plus / Plus Query: 858 ttgggggccagcatattcctttcggagcatcgccacagg 896 ||||||| |||||||| ||||| || ||||||||||||| Sbjct: 33463 ttggggggcagcatatgccttttggtgcatcgccacagg 33501 Score = 44.1 bits (22), Expect = 1.6 Identities = 52/62 (83%) Strand = Plus / Plus Query: 272 atgccgatttccgatgcatttgcgcagattgaacaccagccaaacatttacgatgttgtc 331 |||||||||| |||||||||||||| || || || ||||| ||||| ||||| || ||| Sbjct: 32382 atgccgatttgtgatgcatttgcgcaaatagagcagcagcctaacatatacgacgtcgtc 32441 Query: 332 ca 333 || Sbjct: 32442 ca 32443
>ref|NM_114973.2| Arabidopsis thaliana unknown protein (AT3G51130) mRNA, complete cds Length = 1571 Score = 56.0 bits (28), Expect = 4e-04 Identities = 91/112 (81%) Strand = Plus / Plus Query: 858 ttgggggccagcatattcctttcggagcatcgccacaggatatctggaccgagttgggtc 917 |||| ||||||||||| ||||| || ||||| ||||||||| | ||||| || || |||| Sbjct: 794 ttggaggccagcatatgccttttggtgcatcaccacaggatgtatggactgaattaggtc 853 Query: 918 gtccatgcggtatccatcagaagcaggtggaccaaatggttatacactctgc 969 | || || || ||||| | |||||||| || ||||||||||| || ||||| Sbjct: 854 gaccttgtgggatccacccaaagcaggtagatcaaatggttattcattctgc 905 Score = 42.1 bits (21), Expect = 6.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1100 ggtcattctgatttcaattcgtacatgaaatgcaactttgt 1140 |||||| |||||||||| || ||||| || ||||||||||| Sbjct: 1036 ggtcatgctgatttcaactcatacataaagtgcaactttgt 1076
>gb|AY086173.1| Arabidopsis thaliana clone 21956 mRNA, complete sequence Length = 1498 Score = 56.0 bits (28), Expect = 4e-04 Identities = 91/112 (81%) Strand = Plus / Plus Query: 858 ttgggggccagcatattcctttcggagcatcgccacaggatatctggaccgagttgggtc 917 |||| ||||||||||| ||||| || ||||| ||||||||| | ||||| || || |||| Sbjct: 753 ttggaggccagcatatgccttttggtgcatcaccacaggatgtatggactgaattaggtc 812 Query: 918 gtccatgcggtatccatcagaagcaggtggaccaaatggttatacactctgc 969 | || || || ||||| | |||||||| || ||||||||||| || ||||| Sbjct: 813 gaccttgtgggatccacccaaagcaggtagatcaaatggttattcattctgc 864 Score = 42.1 bits (21), Expect = 6.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1100 ggtcattctgatttcaattcgtacatgaaatgcaactttgt 1140 |||||| |||||||||| || ||||| || ||||||||||| Sbjct: 995 ggtcatgctgatttcaactcatacataaagtgcaactttgt 1035
>gb|AY037194.1| Arabidopsis thaliana AT3g51130/F24M12_170 mRNA, complete cds Length = 1571 Score = 56.0 bits (28), Expect = 4e-04 Identities = 91/112 (81%) Strand = Plus / Plus Query: 858 ttgggggccagcatattcctttcggagcatcgccacaggatatctggaccgagttgggtc 917 |||| ||||||||||| ||||| || ||||| ||||||||| | ||||| || || |||| Sbjct: 794 ttggaggccagcatatgccttttggtgcatcaccacaggatgtatggactgaattaggtc 853 Query: 918 gtccatgcggtatccatcagaagcaggtggaccaaatggttatacactctgc 969 | || || || ||||| | |||||||| || ||||||||||| || ||||| Sbjct: 854 gaccttgtgggatccacccaaagcaggtagatcaaatggttattcattctgc 905 Score = 42.1 bits (21), Expect = 6.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1100 ggtcattctgatttcaattcgtacatgaaatgcaactttgt 1140 |||||| |||||||||| || ||||| || ||||||||||| Sbjct: 1036 ggtcatgctgatttcaactcatacataaagtgcaactttgt 1076
>gb|BT002670.1| Arabidopsis thaliana At3g51130/F24M12_170 gene, complete cds Length = 1233 Score = 56.0 bits (28), Expect = 4e-04 Identities = 91/112 (81%) Strand = Plus / Plus Query: 858 ttgggggccagcatattcctttcggagcatcgccacaggatatctggaccgagttgggtc 917 |||| ||||||||||| ||||| || ||||| ||||||||| | ||||| || || |||| Sbjct: 716 ttggaggccagcatatgccttttggtgcatcaccacaggatgtatggactgaattaggtc 775 Query: 918 gtccatgcggtatccatcagaagcaggtggaccaaatggttatacactctgc 969 | || || || ||||| | |||||||| || ||||||||||| || ||||| Sbjct: 776 gaccttgtgggatccacccaaagcaggtagatcaaatggttattcattctgc 827 Score = 42.1 bits (21), Expect = 6.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1100 ggtcattctgatttcaattcgtacatgaaatgcaactttgt 1140 |||||| |||||||||| || ||||| || ||||||||||| Sbjct: 958 ggtcatgctgatttcaactcatacataaagtgcaactttgt 998
>emb|CR855139.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0404F02, complete sequence Length = 130181 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 93 ccgccacggcgatgcagacgcagagg 118 ||||||||||||||| |||||||||| Sbjct: 101789 ccgccacggcgatgccgacgcagagg 101814
>ref|NM_001060176.1| Oryza sativa (japonica cultivar-group) Os04g0578600 (Os04g0578600) mRNA, partial cds Length = 2390 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 ccgccacggcgatgcagacgcagagg 118 ||||||||||||||| |||||||||| Sbjct: 2087 ccgccacggcgatgccgacgcagagg 2062
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 531 atgctctattcggaccaacttt 552 |||||||||||||||||||||| Sbjct: 12859966 atgctctattcggaccaacttt 12859945
>emb|CT573052.2| Medicago truncatula chromosome 5 clone mth2-60f21, COMPLETE SEQUENCE Length = 131869 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 632 caatatacaaatttcttcaaca 653 |||||||||||||||||||||| Sbjct: 47402 caatatacaaatttcttcaaca 47381
>ref|NM_142331.1| Drosophila melanogaster CG4009-RA (CG4009), mRNA Length = 1872 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 531 atgctctattcggaccaacttt 552 |||||||||||||||||||||| Sbjct: 1652 atgctctattcggaccaacttt 1673
>dbj|AB126085.1| Oryza sativa (japonica cultivar-group) 0sFRO2 mRNA for ferric reductase, complete cds Length = 2395 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 ccgccacggcgatgcagacgcagagg 118 ||||||||||||||| |||||||||| Sbjct: 2092 ccgccacggcgatgccgacgcagagg 2067
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 229 cgacctccgccccggcctcggcgtcg 254 ||||| |||||||||||||||||||| Sbjct: 4285041 cgaccaccgccccggcctcggcgtcg 4285016
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 93 ccgccacggcgatgcagacgcagagg 118 ||||||||||||||| |||||||||| Sbjct: 29152371 ccgccacggcgatgccgacgcagagg 29152396 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 241 cggcctcggcgtcggccccttcaccctcg 269 |||||||||||||||| ||||||| |||| Sbjct: 30036757 cggcctcggcgtcggcgccttcacgctcg 30036785
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 232 cctccgccccggcctcggcgtcggcc 257 |||| ||||||||||||||||||||| Sbjct: 266331 cctcggccccggcctcggcgtcggcc 266356
>emb|AL606624.4|OSJN00058 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011J08, complete sequence Length = 157734 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 93 ccgccacggcgatgcagacgcagagg 118 ||||||||||||||| |||||||||| Sbjct: 61839 ccgccacggcgatgccgacgcagagg 61864
>gb|AC007807.8|AC007807 Drosophila melanogaster, chromosome 3R, region 89E-89E, BAC clone BACR01E04, complete sequence Length = 172674 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 531 atgctctattcggaccaacttt 552 |||||||||||||||||||||| Sbjct: 19459 atgctctattcggaccaacttt 19438
>gb|AC091636.1|AC091636 Drosophila melanogaster, chromosome 3R, region 89E-89E, BAC clone BACR03M20, complete sequence Length = 175335 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 531 atgctctattcggaccaacttt 552 |||||||||||||||||||||| Sbjct: 139312 atgctctattcggaccaacttt 139291
>dbj|AK068159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135D03, full insert sequence Length = 2395 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 93 ccgccacggcgatgcagacgcagagg 118 ||||||||||||||| |||||||||| Sbjct: 2092 ccgccacggcgatgccgacgcagagg 2067
>emb|CR855235.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0142I02-OSIGBa0101B20, complete sequence Length = 189880 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 241 cggcctcggcgtcggccccttcaccctcg 269 |||||||||||||||| ||||||| |||| Sbjct: 183355 cggcctcggcgtcggcgccttcacgctcg 183383
>ref|NM_001063751.1| Oryza sativa (japonica cultivar-group) Os06g0229800 (Os06g0229800) mRNA, complete cds Length = 2959 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 cctccgccccggcctcggcgtcggc 256 ||||||||||||||||||| ||||| Sbjct: 363 cctccgccccggcctcggcctcggc 387
>ref|NM_001060264.1| Oryza sativa (japonica cultivar-group) Os04g0594800 (Os04g0594800) mRNA, complete cds Length = 2594 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 241 cggcctcggcgtcggccccttcaccctcg 269 |||||||||||||||| ||||||| |||| Sbjct: 847 cggcctcggcgtcggcgccttcacgctcg 875
>gb|DQ156149.1| Salmo salar clone BAC S0085O16, partial sequence Length = 219899 Score = 42.1 bits (21), Expect = 6.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 1070 aagaagtttgttttacatacaaacttccctggtcatt 1106 ||||||||||| | ||||| |||||||||||||||| Sbjct: 113501 aagaagtttgtccttcataccaacttccctggtcatt 113465
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 168 ccccggcgacggtgccggtgaggcg 192 ||||| ||||||||||||||||||| Sbjct: 1944860 ccccgccgacggtgccggtgaggcg 1944884
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 gggtcggcggtcgggtcgccg 166 ||||||||||||||||||||| Sbjct: 1109634 gggtcggcggtcgggtcgccg 1109654
>ref|NM_001336.2| Homo sapiens cathepsin Z (CTSZ), mRNA Length = 1501 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 ccgccccggcctcggcgtcggcccc 259 |||||||||||||||| |||||||| Sbjct: 47 ccgccccggcctcggcctcggcccc 23
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 ccggcgacggtgccggtgagg 190 ||||||||||||||||||||| Sbjct: 4251730 ccggcgacggtgccggtgagg 4251750
>gb|AC104200.12| Mus musculus chromosome 13, clone RP24-512M2, complete sequence Length = 171912 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1089 caaacttccctggtcattctg 1109 ||||||||||||||||||||| Sbjct: 61673 caaacttccctggtcattctg 61653
>gb|AF032906.1| Homo sapiens cathepsin Z precursor (CTSZ) mRNA, complete cds Length = 1541 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 ccgccccggcctcggcgtcggcccc 259 |||||||||||||||| |||||||| Sbjct: 162 ccgccccggcctcggcctcggcccc 138
>gb|AY423717.1| Oryza sativa (indica cultivar-group) soluble starch synthase II (ALK) gene, complete cds Length = 4422 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 cctccgccccggcctcggcgtcggc 256 ||||||||||||||||||| ||||| Sbjct: 160 cctccgccccggcctcggcctcggc 184
>ref|XM_799521.1| Trypanosoma cruzi strain CL Brener ribonuclease inhibitor (Tc00.1047053511893.10) partial mRNA Length = 2702 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 ggtgccggtgaggcggcgctg 198 ||||||||||||||||||||| Sbjct: 81 ggtgccggtgaggcggcgctg 101
>ref|XM_800070.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509893.10) partial mRNA Length = 3123 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 ggtgccggtgaggcggcgctg 198 ||||||||||||||||||||| Sbjct: 1522 ggtgccggtgaggcggcgctg 1542
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 167 tccccggcgacggtgccggtgaggcggcg 195 ||||||||| ||||| ||||||||||||| Sbjct: 3841586 tccccggcgccggtgtcggtgaggcggcg 3841558
>dbj|AB115918.1| Oryza sativa (indica cultivar-group) mRNA for starch synthase IIa, complete cds, cultivar:Kasalath Length = 2433 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 cctccgccccggcctcggcgtcggc 256 ||||||||||||||||||| ||||| Sbjct: 160 cctccgccccggcctcggcctcggc 184
>dbj|AB115917.1| Oryza sativa (indica cultivar-group) mRNA for starch synthase IIa, complete cds, cultivar:IR36 Length = 2433 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 cctccgccccggcctcggcgtcggc 256 ||||||||||||||||||| ||||| Sbjct: 160 cctccgccccggcctcggcctcggc 184
>dbj|AB115916.1| Oryza sativa (japonica cultivar-group) mRNA for starch synthase IIa, complete cds, cultivar:Kinmaze Length = 2433 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 cctccgccccggcctcggcgtcggc 256 ||||||||||||||||||| ||||| Sbjct: 160 cctccgccccggcctcggcctcggc 184
>dbj|AB115915.1| Oryza sativa (japonica cultivar-group) mRNA for starch synthase IIa, complete cds, cultivar:Nipponbare Length = 2447 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 cctccgccccggcctcggcgtcggc 256 ||||||||||||||||||| ||||| Sbjct: 174 cctccgccccggcctcggcctcggc 198
>gb|AF419099.1|AF419099 Oryza sativa putative soluble starch synthase II-3 mRNA, complete cds Length = 2959 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 cctccgccccggcctcggcgtcggc 256 ||||||||||||||||||| ||||| Sbjct: 363 cctccgccccggcctcggcctcggc 387
>emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006A01, complete sequence Length = 143157 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 241 cggcctcggcgtcggccccttcaccctcg 269 |||||||||||||||| ||||||| |||| Sbjct: 76439 cggcctcggcgtcggcgccttcacgctcg 76467
>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12, complete sequence Length = 179644 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 241 cggcctcggcgtcggccccttcaccctcg 269 |||||||||||||||| ||||||| |||| Sbjct: 173509 cggcctcggcgtcggcgccttcacgctcg 173537
>emb|AL132980.3|ATF24M12 Arabidopsis thaliana DNA chromosome 3, BAC clone F24M12 Length = 129516 Score = 42.1 bits (21), Expect = 6.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1100 ggtcattctgatttcaattcgtacatgaaatgcaactttgt 1140 |||||| |||||||||| || ||||| || ||||||||||| Sbjct: 55771 ggtcatgctgatttcaactcatacataaagtgcaactttgt 55811
>gb|AC157773.6| Mus musculus chromosome 8, clone RP24-161L20, complete sequence Length = 179186 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1609 tcttttgccgtcaggatatct 1629 ||||||||||||||||||||| Sbjct: 106031 tcttttgccgtcaggatatct 106011
>gb|AC010102.3|AC010102 Homo sapiens BAC clone RP11-486B15 from 2, complete sequence Length = 230827 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 ccgccccggcctcggcgtcggcccc 259 |||||||||||||||| |||||||| Sbjct: 101788 ccgccccggcctcggcctcggcccc 101812
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 167 tccccggcgacggtgccggtgaggcggcg 195 ||||||||| ||||| ||||||||||||| Sbjct: 115128 tccccggcgccggtgtcggtgaggcggcg 115100
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 cctccgccccggcctcggcgtcggc 256 ||||||||||||||||||| ||||| Sbjct: 89216 cctccgccccggcctcggcctcggc 89240
>dbj|AK101978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076P09, full insert sequence Length = 2919 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 cctccgccccggcctcggcgtcggc 256 ||||||||||||||||||| ||||| Sbjct: 324 cctccgccccggcctcggcctcggc 348
>dbj|AK070801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072A11, full insert sequence Length = 2594 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 241 cggcctcggcgtcggccccttcaccctcg 269 |||||||||||||||| ||||||| |||| Sbjct: 847 cggcctcggcgtcggcgccttcacgctcg 875
>gb|AF136274.1|HSCTSZ1 Homo sapiens cathepsin Z precursor (CTSZ) gene, exons 1 and 2 Length = 3046 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 ccgccccggcctcggcgtcggcccc 259 |||||||||||||||| |||||||| Sbjct: 306 ccgccccggcctcggcctcggcccc 282
>gb|AF136273.1|AF136273 Homo sapiens cathepsin Z precursor (CTSZ) mRNA, complete cds Length = 1500 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 ccgccccggcctcggcgtcggcccc 259 |||||||||||||||| |||||||| Sbjct: 47 ccgccccggcctcggcctcggcccc 23
>gb|AC121131.14| Mus musculus chromosome 8, clone RP23-187D7, complete sequence Length = 188634 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1609 tcttttgccgtcaggatatct 1629 ||||||||||||||||||||| Sbjct: 188619 tcttttgccgtcaggatatct 188599
>emb|AJ544616.1|TRU544616 Takifugu rubripes dmd gene for putative dystrophin, exons 67-73 Length = 14923 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1495 gtctctctgtaaatatcattc 1515 ||||||||||||||||||||| Sbjct: 4516 gtctctctgtaaatatcattc 4536
>gb|AF031407.1|AF031407 Rhodobacter capsulatus puc operon upstream regulatory region Length = 2686 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 172 ggcgacggtgccggtgaggcggcgc 196 |||||||||||||||| |||||||| Sbjct: 1046 ggcgacggtgccggtggggcggcgc 1022
>gb|AF031406.1|AF031406 Rhodobacter capsulatus NADPH dependent glutamate synthase small subunit homolog838 (gltX) gene, complete cds Length = 2687 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 172 ggcgacggtgccggtgaggcggcgc 196 |||||||||||||||| |||||||| Sbjct: 1641 ggcgacggtgccggtggggcggcgc 1665
>gb|BC025419.2| Homo sapiens cathepsin Z, mRNA (cDNA clone IMAGE:3929674), partial cds Length = 1009 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 ccgccccggcctcggcgtcggcccc 259 |||||||||||||||| |||||||| Sbjct: 39 ccgccccggcctcggcctcggcccc 15 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 273,055,843 Number of extensions: 13440339 Number of successful extensions: 260941 Number of sequences better than 10.0: 60 Number of HSP's gapped: 260935 Number of HSP's successfully gapped: 107 Length of query: 1679 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1656 Effective length of database: 18,503,978,556 Effective search space: 30642588488736 Effective search space used: 30642588488736 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)