ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf28a05 |
|---|---|
| Clone Library Name | barley_pub |
>Q4R8H2:DNJC2_MACFA DnaJ homolog subfamily C member 2 - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 621 Score = 63.2 bits (152), Expect = 2e-09 Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 13/158 (8%) Frame = +2 Query: 596 WTDQEMELLRRQMLKHPAGEPQRWEKIA------AVFGGRRTPESVI-------RXXXXX 736 W++ +++LL + + PAG RWE IA + G +RT + VI + Sbjct: 454 WSEDDLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPHQ 513 Query: 737 XXXXXXXXFEQFLRKRKPLDPRXXXXXXXXXXXXXXXXXXXXXXEDRALLNALKEFPKDT 916 F++F ++ + E + L ALK +P +T Sbjct: 514 KDDINKKAFDKFKKEHGVVPQADNAAPSERFEGPYTDFTPWTTEEQKLLEQALKTYPVNT 573 Query: 917 TMRWEKVASAVPGKTKAGCMKRVTELKRDFRSSKES*E 1030 RWEK+A AVPG+TK CMKR EL ++ K + E Sbjct: 574 PERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQE 611
>Q99543:DNJC2_HUMAN DnaJ homolog subfamily C member 2 - Homo sapiens (Human)| Length = 621 Score = 63.2 bits (152), Expect = 2e-09 Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 13/158 (8%) Frame = +2 Query: 596 WTDQEMELLRRQMLKHPAGEPQRWEKIA------AVFGGRRTPESVI-------RXXXXX 736 W++ +++LL + + PAG RWE IA + G +RT + VI + Sbjct: 454 WSEDDLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPHQ 513 Query: 737 XXXXXXXXFEQFLRKRKPLDPRXXXXXXXXXXXXXXXXXXXXXXEDRALLNALKEFPKDT 916 F++F ++ + E + L ALK +P +T Sbjct: 514 KDDINKKAFDKFKKEHGVVPQADNATPSERFEGPYTDFTPWTTEEQKLLEQALKTYPVNT 573 Query: 917 TMRWEKVASAVPGKTKAGCMKRVTELKRDFRSSKES*E 1030 RWEK+A AVPG+TK CMKR EL ++ K + E Sbjct: 574 PERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQE 611
>Q1RMH9:DNJC2_BOVIN DnaJ homolog subfamily C member 2 - Bos taurus (Bovine)| Length = 621 Score = 63.2 bits (152), Expect = 2e-09 Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 13/158 (8%) Frame = +2 Query: 596 WTDQEMELLRRQMLKHPAGEPQRWEKIA------AVFGGRRTPESVI-------RXXXXX 736 W++ +++LL + + PAG RWE IA + G +RT + VI + Sbjct: 454 WSEDDLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPHQ 513 Query: 737 XXXXXXXXFEQFLRKRKPLDPRXXXXXXXXXXXXXXXXXXXXXXEDRALLNALKEFPKDT 916 F++F ++ + E + L ALK +P +T Sbjct: 514 KDDINKKAFDKFKKEHGVVPQADNATPSERFEGPCTDFTPWTTEEQKLLEQALKTYPVNT 573 Query: 917 TMRWEKVASAVPGKTKAGCMKRVTELKRDFRSSKES*E 1030 RWEK+A AVPG+TK CMKR EL ++ K + E Sbjct: 574 PERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQE 611
>Q7TQ20:DNJC2_RAT DnaJ homolog subfamily C member 2 - Rattus norvegicus (Rat)| Length = 621 Score = 62.0 bits (149), Expect = 6e-09 Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 14/159 (8%) Frame = +2 Query: 596 WTDQEMELLRRQMLKHPAGEPQRWEKIA------AVFGGRRTPESVI-------RXXXXX 736 W++ +++LL + + PAG RWE IA + G +RT + VI + Sbjct: 454 WSEDDLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPHQ 513 Query: 737 XXXXXXXXFEQFLRKRKPLDPRXXXXXXXXXXXXXXXXXXXXXXEDRALL-NALKEFPKD 913 F++F +K + P+ E++ LL ALK +P + Sbjct: 514 KDDINKKAFDKF-KKEHGVAPQADSAAPSERFEGPCIDSIPWTTEEQKLLEQALKTYPVN 572 Query: 914 TTMRWEKVASAVPGKTKAGCMKRVTELKRDFRSSKES*E 1030 T RWEK+A AVPG+TK CM+R EL ++ K + E Sbjct: 573 TPERWEKIAEAVPGRTKKDCMRRYKELVEMVKAKKAAQE 611
>P54103:DNJC2_MOUSE DnaJ homolog subfamily C member 2 - Mus musculus (Mouse)| Length = 621 Score = 61.6 bits (148), Expect = 7e-09 Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 13/158 (8%) Frame = +2 Query: 596 WTDQEMELLRRQMLKHPAGEPQRWEKIAAVF------GGRRTPESVI-------RXXXXX 736 W++ +++LL + + PAG RWE IA G +RT + VI + Sbjct: 454 WSEDDLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVISKAKSLQKLDPHQ 513 Query: 737 XXXXXXXXFEQFLRKRKPLDPRXXXXXXXXXXXXXXXXXXXXXXEDRALLNALKEFPKDT 916 F++F ++ E + L ALK +P +T Sbjct: 514 KDDINKKAFDKFKKEHGVASQADSAAPSERFEGPCIDSTPWTTEEQKLLEQALKTYPVNT 573 Query: 917 TMRWEKVASAVPGKTKAGCMKRVTELKRDFRSSKES*E 1030 RWEK+A AVPG+TK CM+R EL ++ K + E Sbjct: 574 PERWEKIAEAVPGRTKKDCMRRYKELVEMVKAKKAAQE 611
>P34454:YMA9_CAEEL Uncharacterized protein F54F2.9 - Caenorhabditis elegans| Length = 299 Score = 50.8 bits (120), Expect = 1e-05 Identities = 48/216 (22%), Positives = 77/216 (35%), Gaps = 2/216 (0%) Frame = +2 Query: 377 RGSLLPDQEPSQEPTPDPTAPSRRGRRQNXXXXXXXXXXXXXXXXXXXXXXXXXMRAGTA 556 + ++ P + +EPT + A RR +R M A Sbjct: 93 KDAMTPKEVEPEEPTEEELAQQRRQQRAAAAPQQLEFKFEVAQGMKAVSTNDPEMEKKYA 152 Query: 557 VPDAGEREEEVGE-WTDQEM-ELLRRQMLKHPAGEPQRWEKIAAVFGGRRTPESVIRXXX 730 + +++ G WT E+ L+R K+PAG P RWE++ V R+ E VI Sbjct: 153 AENEVVAQKQSGATWTPDELASLVRLSTEKYPAGTPNRWEQMGRVLN--RSAEDVIAMAG 210 Query: 731 XXXXXXXXXXFEQFLRKRKPLDPRXXXXXXXXXXXXXXXXXXXXXXEDRALLNALKEFPK 910 + + + P E +A AL+++PK Sbjct: 211 KMKQMKQEDYTKLLMTTIQQSVP-----------VEEKSEDDWSQAEQKAFETALQKYPK 259 Query: 911 DTTMRWEKVASAVPGKTKAGCMKRVTELKRDFRSSK 1018 T RWE+++ + KTK M R +L R K Sbjct: 260 GTDERWERISEEIGSKTKKQVMVRFKQLAEMIRKKK 295
>Q96KC8:DNJC1_HUMAN DnaJ homolog subfamily C member 1 - Homo sapiens (Human)| Length = 554 Score = 43.5 bits (101), Expect = 0.002 Identities = 17/39 (43%), Positives = 26/39 (66%) Frame = +2 Query: 575 REEEVGEWTDQEMELLRRQMLKHPAGEPQRWEKIAAVFG 691 ++++ EWT++++ L R M+K P G P RWEKIA G Sbjct: 323 QKKQAPEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHELG 361 Score = 37.7 bits (86), Expect = 0.11 Identities = 16/52 (30%), Positives = 31/52 (59%) Frame = +2 Query: 869 EDRALLNALKEFPKDTTMRWEKVASAVPGKTKAGCMKRVTELKRDFRSSKES 1024 + + L AL+++P+ ++ RW+K+A VP K+K C+ R L + K++ Sbjct: 501 QQKLLELALQQYPRGSSDRWDKIARCVPSKSKEDCIARYKLLVELVQKKKQA 552 Score = 32.0 bits (71), Expect = 6.1 Identities = 12/42 (28%), Positives = 21/42 (50%) Frame = +2 Query: 596 WTDQEMELLRRQMLKHPAGEPQRWEKIAAVFGGRRTPESVIR 721 WT + +LL + ++P G RW+KIA + + + R Sbjct: 497 WTQNQQKLLELALQQYPRGSSDRWDKIARCVPSKSKEDCIAR 538
>Q61712:DNJC1_MOUSE DnaJ homolog subfamily C member 1 - Mus musculus (Mouse)| Length = 552 Score = 42.0 bits (97), Expect = 0.006 Identities = 16/39 (41%), Positives = 25/39 (64%) Frame = +2 Query: 575 REEEVGEWTDQEMELLRRQMLKHPAGEPQRWEKIAAVFG 691 ++ + EWT++++ L R M+K P G P RW+KIA G Sbjct: 321 QKRQAPEWTEEDLSQLTRSMVKFPGGTPGRWDKIAHELG 359 Score = 38.9 bits (89), Expect = 0.050 Identities = 17/52 (32%), Positives = 30/52 (57%) Frame = +2 Query: 869 EDRALLNALKEFPKDTTMRWEKVASAVPGKTKAGCMKRVTELKRDFRSSKES 1024 + + L AL+++PK + RW+K+A VP K+K C+ R L + K++ Sbjct: 499 QQKLLELALQQYPKGASDRWDKIAKCVPSKSKEDCIARYKLLVELVQKKKQA 550 Score = 31.6 bits (70), Expect = 8.0 Identities = 12/42 (28%), Positives = 21/42 (50%) Frame = +2 Query: 596 WTDQEMELLRRQMLKHPAGEPQRWEKIAAVFGGRRTPESVIR 721 WT + +LL + ++P G RW+KIA + + + R Sbjct: 495 WTQSQQKLLELALQQYPKGASDRWDKIAKCVPSKSKEDCIAR 536
>Q6KAQ7:ZZZ3_MOUSE Zinc finger ZZ-type-containing protein 3 - Mus musculus (Mouse)| Length = 910 Score = 31.6 bits (70), Expect = 8.0 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Frame = +2 Query: 596 WTDQEMELLRRQMLKHPAG--EPQRWEKIAAVFGGRRTPESVIR 721 WT +E + L + +LK+P E +RW+KIA G R + R Sbjct: 662 WTVEEQKKLEQLLLKYPPEEVESRRWQKIADELGNRTAKQVASR 705 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 180,739,735 Number of extensions: 3452353 Number of successful extensions: 12367 Number of sequences better than 10.0: 9 Number of HSP's gapped: 12324 Number of HSP's successfully gapped: 20 Length of query: 454 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 337 Effective length of database: 68,593,924 Effective search space: 23116152388 Effective search space used: 23116152388 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
