ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf6o13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK072777:Os02g0591700 | 374 | e-104 | 2 | AK067896:Os04g0473400 | 358 | 4e-99 | 3 | Os11g0529900:Os11g0529900 | 35 | 0.057 | 4 | AK066340:Os10g0564300 | 33 | 0.28 | 5 | Os05g0151000:Os05g0151000 | 33 | 0.37 | 6 | AK109474:Os03g0276500 | 32 | 0.49 | 7 | AK099275:Os03g0276500 | 32 | 0.49 | 8 | AK072830:Os03g0276500 | 32 | 0.49 | 9 | AK065651:Os08g0461300 | 32 | 0.63 | 10 | AK121593:Os02g0284600 | 30 | 1.8 | 11 | AK066480:Os10g0181200 | 30 | 1.8 | 12 | Os03g0308700:Os03g0308700 | 30 | 3.1 | 13 | AK110543:Os03g0412400 | 26 | 3.3 | 14 | Os03g0207700:Os03g0207700 | 29 | 4.1 | 15 | AK109558:Os07g0271500 | 29 | 4.1 | 16 | AK071875:Os07g0658700 | 29 | 4.1 | 17 | AK109823:Os04g0607400 | 29 | 5.4 | 18 | AK106108:Os04g0607400 | 29 | 5.4 | 19 | AK106066:Os04g0607400 | 29 | 5.4 | 20 | AK066668:Os04g0607400 | 29 | 5.4 | 21 | AK063279:Os04g0607400 | 29 | 5.4 | 22 | AK122108:Os03g0711800 | 28 | 7.0 | 23 | AK121293:Os01g0169900 | 28 | 7.0 | 24 | AK106515:Os03g0711800 | 28 | 7.0 | 25 | AK070973:Os07g0164800 | 28 | 9.2 |
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>AK072777:Os02g0591700 | Length = 219 Score = 374 bits (961), Expect = e-104 Identities = 188/219 (85%), Positives = 197/219 (89%) Frame = +3 Query: 66 MAPTSKMALGIKRASRSHSYHRRGLWAIKAKNGGXXXXXXXXXXXXXXXXYPADDVKPRT 245 MAPTSK++ GIKRASRSH+YHRRGLWAIKAKNGG YPADDVKPR Sbjct: 1 MAPTSKLSQGIKRASRSHTYHRRGLWAIKAKNGGTFPKAGKPAAAAEPKFYPADDVKPRA 60 Query: 246 ASTRKPKPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPVRRV 425 STRK PTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVP+RRV Sbjct: 61 PSTRKANPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPIRRV 120 Query: 426 NQAYVIATSTKVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDD 605 NQAYVIATSTKVDISGVKV+KFDDKYFARDKKA+AKKTEGELFETEKEATKNLPDFKKDD Sbjct: 121 NQAYVIATSTKVDISGVKVDKFDDKYFARDKKAKAKKTEGELFETEKEATKNLPDFKKDD 180 Query: 606 QKAIDAELIKAIDAVPDLKNYLGARFSLRDGDKPHEMTF 722 QKA+DAELIKAI+ VPDLK+YLGARFSLRDGDKPHEMTF Sbjct: 181 QKAVDAELIKAIEVVPDLKSYLGARFSLRDGDKPHEMTF 219
>AK067896:Os04g0473400 | Length = 239 Score = 358 bits (918), Expect = 4e-99 Identities = 181/236 (76%), Positives = 198/236 (83%), Gaps = 3/236 (1%) Frame = +3 Query: 24 LQPKRPHASTQGIPMAPTSKMALGIKRASRSHSYHRRGLWAIKAKNGGXXXXXXXXXXXX 203 L+ P + PMAPTSK++ GIK+ASRSH+YHRRGLWAIKAK+GG Sbjct: 4 LRTSSPPPPPRADPMAPTSKLSQGIKKASRSHTYHRRGLWAIKAKHGGAFPKAEKPAAAA 63 Query: 204 XXXX---YPADDVKPRTASTRKPKPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGL 374 YPADDVKPR STRKP PTKLRS+ITPGTVLILLAGR+MGKRVVFLKQLKSGL Sbjct: 64 AAAAPKFYPADDVKPRQPSTRKPNPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGL 123 Query: 375 LLITGPFKINGVPVRRVNQAYVIATSTKVDISGVKVEKFDDKYFARDKKARAKKTEGELF 554 LL+TGPFKINGVP+RRVNQ YVIATSTKVDISGV VEKFDDKYF+RDKK +AKKTEGELF Sbjct: 124 LLVTGPFKINGVPIRRVNQPYVIATSTKVDISGVNVEKFDDKYFSRDKKQKAKKTEGELF 183 Query: 555 ETEKEATKNLPDFKKDDQKAIDAELIKAIDAVPDLKNYLGARFSLRDGDKPHEMTF 722 ETEKEATKNLP+FKK+DQK +DAELIKAI+AVPDLK YLGARFSLRDGDKPHEM F Sbjct: 184 ETEKEATKNLPEFKKEDQKVVDAELIKAIEAVPDLKTYLGARFSLRDGDKPHEMVF 239
>Os11g0529900:Os11g0529900 | Length = 407 Score = 35.4 bits (80), Expect = 0.057 Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 13/105 (12%) Frame = +3 Query: 432 AYVIATSTKVDISGVKVEKFDDKYFA-------RDKKARAKKT------EGELFETEKEA 572 A V+A T S V E++ D YF D KA+ K+ + F +E Sbjct: 29 AAVLAIGTANPASWVTQEEYVDWYFRVTNSEHLADLKAKMKRICDKSGIKKRHFHLTEEL 88 Query: 573 TKNLPDFKKDDQKAIDAELIKAIDAVPDLKNYLGARFSLRDGDKP 707 + PDF Q ++DA L A AVP+L AR ++ + +P Sbjct: 89 LADHPDFADRAQPSLDARLDVAAAAVPELAAAAAARKAIAEWGRP 133
>AK066340:Os10g0564300 | Length = 136 Score = 33.1 bits (74), Expect = 0.28 Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 25/129 (19%) Frame = +3 Query: 288 ITPGTVLILLAGRYMGKRVVFLKQLKSGL-------LLITGPFKINGVPVRR-------- 422 + PG +ILL GR+ G++ V ++ + G L+ G K +R+ Sbjct: 5 LKPGKAVILLQGRFAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAKKTAK 64 Query: 423 ----------VNQAYVIATSTKVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEA 572 VN +++ T +D+ +V D RDKK A K+ E + Sbjct: 65 KSRVKCFLKLVNFTHLMPTRYTLDVDLKEVAAGPDALATRDKKVAACKSAKARLEDRFKT 124 Query: 573 TKNLPDFKK 599 KN F K Sbjct: 125 GKNRWFFTK 133
>Os05g0151000:Os05g0151000 | Length = 2085 Score = 32.7 bits (73), Expect = 0.37 Identities = 20/56 (35%), Positives = 26/56 (46%) Frame = +2 Query: 20 PSSAEAPTRLDPRDPNGADVQDGAGHQARVAVALLPPPRALGHQGQERRSLPKGRE 187 PSS+ P R +P AD HQ R+A +L PP + + ER K RE Sbjct: 1915 PSSSPLPPRPPSPEPRSADAVHIICHQPRIASSLRPPLASTRERIGERGRKKKARE 1970
>AK109474:Os03g0276500 | Length = 650 Score = 32.3 bits (72), Expect = 0.49 Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 2/144 (1%) Frame = +3 Query: 243 TASTRKPKPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPV-- 416 T T+K + S PG ++ + Y G+R + K LL G F+++G+P Sbjct: 425 TIPTKKEQVFSTYSDNQPGVLIQV----YEGERT----RTKDNNLL--GKFELSGIPPAP 474 Query: 417 RRVNQAYVIATSTKVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEATKNLPDFK 596 R V Q I +D +G+ +DK + K +G L ++++ K + + + Sbjct: 475 RGVPQ---ITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRL--SKEDIEKMVQEAE 529 Query: 597 KDDQKAIDAELIKAIDAVPDLKNY 668 K KA D E K +DA L+NY Sbjct: 530 K--YKAEDEEHKKKVDAKNSLENY 551
>AK099275:Os03g0276500 | Length = 650 Score = 32.3 bits (72), Expect = 0.49 Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 2/144 (1%) Frame = +3 Query: 243 TASTRKPKPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPV-- 416 T T+K + S PG ++ + Y G+R + K LL G F+++G+P Sbjct: 425 TIPTKKEQVFSTYSDNQPGVLIQV----YEGERT----RTKDNNLL--GKFELSGIPPAP 474 Query: 417 RRVNQAYVIATSTKVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEATKNLPDFK 596 R V Q I +D +G+ +DK + K +G L ++++ K + + + Sbjct: 475 RGVPQ---ITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRL--SKEDIEKMVQEAE 529 Query: 597 KDDQKAIDAELIKAIDAVPDLKNY 668 K KA D E K +DA L+NY Sbjct: 530 K--YKAEDEEHKKKVDAKNSLENY 551
>AK072830:Os03g0276500 | Length = 650 Score = 32.3 bits (72), Expect = 0.49 Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 2/144 (1%) Frame = +3 Query: 243 TASTRKPKPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPV-- 416 T T+K + S PG ++ + Y G+R + K LL G F+++G+P Sbjct: 425 TIPTKKEQVFSTYSDNQPGVLIQV----YEGERT----RTKDNNLL--GKFELSGIPPAP 474 Query: 417 RRVNQAYVIATSTKVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEATKNLPDFK 596 R V Q I +D +G+ +DK + K +G L ++++ K + + + Sbjct: 475 RGVPQ---ITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRL--SKEDIEKMVQEAE 529 Query: 597 KDDQKAIDAELIKAIDAVPDLKNY 668 K KA D E K +DA L+NY Sbjct: 530 K--YKAEDEEHKKKVDAKNSLENY 551
>AK065651:Os08g0461300 | Length = 432 Score = 32.0 bits (71), Expect = 0.63 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -1 Query: 77 RRRHWDPLGRGVWALRLKKGGGGG 6 R R W P W LRL +GGGGG Sbjct: 99 RDRSWSPTAFHDWLLRLSRGGGGG 122
>AK121593:Os02g0284600 | Length = 137 Score = 30.4 bits (67), Expect = 1.8 Identities = 32/130 (24%), Positives = 48/130 (36%), Gaps = 26/130 (20%) Frame = +3 Query: 288 ITPGTVLILLAGRYMGKRVVFLKQLKSGL-------LLITGPFKINGVPVRR-------- 422 + PG +ILL GRY G++ V ++ + G L+ G K +R+ Sbjct: 5 LKPGKAVILLQGRYAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAKKTAK 64 Query: 423 ----------VNQAYVIATSTKVDISGVKVEK-FDDKYFARDKKARAKKTEGELFETEKE 569 VN +++ T +D+ V D RDKK A K E + Sbjct: 65 KSRVKCFLKLVNFTHIMPTRYTLDVDFKDVASGGPDALATRDKKVAACKAAKARLEERFK 124 Query: 570 ATKNLPDFKK 599 KN F K Sbjct: 125 TGKNRWFFTK 134
>AK066480:Os10g0181200 | Length = 1021 Score = 30.4 bits (67), Expect = 1.8 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = -1 Query: 785 GTNFSNKLGKTHSKRRTSTNLEGHLMGLVTVPE---REPGTKIVLKVRDSIDSLDQLSIN 615 G + SN L K + + TS N G L G VP+ R I +++DS+D L+ + Sbjct: 297 GWSISNLLSKENPENSTSANRAG-LRGTKDVPDYLRRYNSLLIDGRLKDSVDLLESMEQK 355 Query: 614 GLL 606 GLL Sbjct: 356 GLL 358
>Os03g0308700:Os03g0308700 | Length = 464 Score = 29.6 bits (65), Expect = 3.1 Identities = 16/35 (45%), Positives = 17/35 (48%) Frame = -3 Query: 582 GSWLPPSQSQTAPLQSSLPWPSCP*QSTCHQTSPP 478 G WLPP S T P + P P P S H T PP Sbjct: 260 GEWLPPPPS-TPPRWTRSPTPPPPPPSPPHATPPP 293
>AK110543:Os03g0412400 | Length = 286 Score = 25.8 bits (55), Expect(2) = 3.3 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = +2 Query: 95 HQARVAVALLPPPRALGHQGQERRS 169 H+ +A + PPP AL G+E++S Sbjct: 164 HEPAMATTMAPPPIALPPAGEEKQS 188 Score = 22.3 bits (46), Expect(2) = 3.3 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +3 Query: 3 AAAASSLLQPKRPHASTQGIPMAPTSKMAL 92 ++AASS +P+RP +S + P SK+A+ Sbjct: 109 SSAASSRRRPQRPRSSAAVVVWRP-SKLAV 137
>Os03g0207700:Os03g0207700 | Length = 144 Score = 29.3 bits (64), Expect = 4.1 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = +2 Query: 2 RCRRLLPSSAEAPTRLDPRDPNGADVQDGAGHQARVAVALLPP 130 +CRR PSSA P D P+ + G VAVAL+PP Sbjct: 74 QCRRRTPSSAHRP---DRHSPSPHTLVLGQMGTTAVAVALIPP 113
>AK109558:Os07g0271500 | Length = 402 Score = 29.3 bits (64), Expect = 4.1 Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 14/90 (15%) Frame = +3 Query: 432 AYVIATSTKVDISGVKVEKFDDKYFA----------RDKKARAKKTEGE----LFETEKE 569 A V+A T + V E+F D YF +DK R + G L TE+ Sbjct: 27 AAVLAIGTANPPNCVTQEEFPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHHTEEM 86 Query: 570 ATKNLPDFKKDDQKAIDAELIKAIDAVPDL 659 + + P+F D ++DA L A DAVP+L Sbjct: 87 LSAH-PEFVDRDAPSLDARLDIAADAVPEL 115
>AK071875:Os07g0658700 | Length = 791 Score = 29.3 bits (64), Expect = 4.1 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = +2 Query: 26 SAEAPTRLDPRDPNGADVQDGAGHQARVAVALLPPPRALGHQG 154 +A +PT DPRD D+ G A A +L P R+L H G Sbjct: 258 AASSPTARDPRDVFARDLPGFMGGAAEPAASL--PHRSLNHSG 298
>AK109823:Os04g0607400 | Length = 198 Score = 28.9 bits (63), Expect = 5.4 Identities = 20/45 (44%), Positives = 23/45 (51%) Frame = -3 Query: 138 ARGGGRSATATRA*CPAPSWTSAPLGSLGSRRVGASAEEGRRRRQ 4 A GG A ATR P P W S G RR G AE GR+R++ Sbjct: 12 AGGGKGGAAATRVASPDPGWGS------GRRRGG--AETGRQRQR 48
>AK106108:Os04g0607400 | Length = 198 Score = 28.9 bits (63), Expect = 5.4 Identities = 20/45 (44%), Positives = 23/45 (51%) Frame = -3 Query: 138 ARGGGRSATATRA*CPAPSWTSAPLGSLGSRRVGASAEEGRRRRQ 4 A GG A ATR P P W S G RR G AE GR+R++ Sbjct: 12 AGGGKGGAAATRVASPDPGWGS------GRRRGG--AETGRQRQR 48
>AK106066:Os04g0607400 | Length = 198 Score = 28.9 bits (63), Expect = 5.4 Identities = 20/45 (44%), Positives = 23/45 (51%) Frame = -3 Query: 138 ARGGGRSATATRA*CPAPSWTSAPLGSLGSRRVGASAEEGRRRRQ 4 A GG A ATR P P W S G RR G AE GR+R++ Sbjct: 12 AGGGKGGAAATRVASPDPGWGS------GRRRGG--AETGRQRQR 48
>AK066668:Os04g0607400 | Length = 323 Score = 28.9 bits (63), Expect = 5.4 Identities = 20/45 (44%), Positives = 23/45 (51%) Frame = -3 Query: 138 ARGGGRSATATRA*CPAPSWTSAPLGSLGSRRVGASAEEGRRRRQ 4 A GG A ATR P P W S G RR G AE GR+R++ Sbjct: 137 AGGGKGGAAATRVASPDPGWGS------GRRRGG--AETGRQRQR 173
>AK063279:Os04g0607400 | Length = 322 Score = 28.9 bits (63), Expect = 5.4 Identities = 20/45 (44%), Positives = 23/45 (51%) Frame = -3 Query: 138 ARGGGRSATATRA*CPAPSWTSAPLGSLGSRRVGASAEEGRRRRQ 4 A GG A ATR P P W S G RR G AE GR+R++ Sbjct: 136 AGGGKGGAAATRVASPDPGWGS------GRRRGG--AETGRQRQR 172
>AK122108:Os03g0711800 | Length = 1267 Score = 28.5 bits (62), Expect = 7.0 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -3 Query: 570 PPSQSQTAPLQSSLPWPSCP*QSTCHQTSPP*HQ 469 P ++ T P SS + P +ST HQ+ PP HQ Sbjct: 521 PNKKTDTPPAVSSQAELNSPVESTSHQSLPPKHQ 554
>AK121293:Os01g0169900 | Length = 628 Score = 28.5 bits (62), Expect = 7.0 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Frame = -3 Query: 576 WLPPSQSQTAP-LQSSLPWPSCP*QSTCH 493 W+PPS T+P SSLP+PS Q H Sbjct: 9 WIPPSSPPTSPSFPSSLPFPSSTNQPPPH 37
>AK106515:Os03g0711800 | Length = 795 Score = 28.5 bits (62), Expect = 7.0 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -3 Query: 570 PPSQSQTAPLQSSLPWPSCP*QSTCHQTSPP*HQ 469 P ++ T P SS + P +ST HQ+ PP HQ Sbjct: 57 PNKKTDTPPAVSSQAELNSPVESTSHQSLPPKHQ 90
>AK070973:Os07g0164800 | Length = 275 Score = 28.1 bits (61), Expect = 9.2 Identities = 23/92 (25%), Positives = 40/92 (43%) Frame = +3 Query: 438 VIATSTKVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAI 617 V + +K D K +K DD++ D++ + K+ E + + +K K KKD + Sbjct: 74 VKSKDSKKDKENKKSDKKDDEHDDEDEEGKKKEKEMKEKKKDKSDKKEEGKKKKDGDEEE 133 Query: 618 DAELIKAIDAVPDLKNYLGARFSLRDGDKPHE 713 + K D D K + +DGD+ E Sbjct: 134 GKKKEKKKDKDGDEKEGKKEKKKDKDGDEEEE 165 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 26,225,091 Number of extensions: 626399 Number of successful extensions: 2843 Number of sequences better than 10.0: 25 Number of HSP's gapped: 2832 Number of HSP's successfully gapped: 26 Length of query: 309 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 209 Effective length of database: 11,395,755 Effective search space: 2381712795 Effective search space used: 2381712795 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
