| Clone Name | FLbaf6o13 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT832093.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA050N23, full insert sequence Length = 876 Score = 858 bits (433), Expect = 0.0 Identities = 607/665 (91%) Strand = Plus / Plus Query: 64 caatggcgccgacgtccaagatggcgctgggcatcaagcgcgcgtcgcggtcgcactcct 123 |||||||||||||||| ||| || ||| |||||||||||||||||||||||||||| ||| Sbjct: 66 caatggcgccgacgtcgaagctgtcgcagggcatcaagcgcgcgtcgcggtcgcacacct 125 Query: 124 accaccgccgcgggctctgggccatcaaggccaagaacggcggagccttcccaaaggccg 183 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 126 accaccgccgcgggctctgggccatcaaggccaagaacggcggcaccttccccaaggccg 185 Query: 184 agaagccagccgccgtcgccgagcccaagttctaccccgccgacgacgtcaagccccgca 243 ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 gcaagcccgccgccgccgccgagcccaagttctaccccgccgacgacgtcaagccccgcg 245 Query: 244 ccgccagcacccgcaagcccaaacctaccaagctcaggtcgaccatcacgcccggcacgg 303 || |||||||||||||| |||| |||||||||||||||||||||||||||||||| |||| Sbjct: 246 cccccagcacccgcaaggccaaccctaccaagctcaggtcgaccatcacgcccgggacgg 305 Query: 304 tgctgatcctgctcgctgggaggtacatggggaagcgcgtggtgttcctcaagcagctca 363 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 306 tgctgatcctgctcgccgggaggtacatggggaagcgcgtcgtgttcctcaagcagctca 365 Query: 364 agtctggcctgctcctcatcactggacctttcaagatcaatggtgtcccagttcgccggg 423 |||| ||||||||||||||||| |||||||| ||||||||||| || || | ||||| | Sbjct: 366 agtccggcctgctcctcatcaccggaccttttaagatcaatggagtgcccatccgccgtg 425 Query: 424 tgaaccaggcttatgtcattgccacatccacaaaggttgacatctctggtgttaaggtgg 483 |||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 426 tgaaccaggcctacgtcattgccacatccacgaaggttgacatctctggtgttaaggtgg 485 Query: 484 agaagtttgatgacaagtactttgctagggacaagaaggccagggcaaagaagactgaag 543 | ||||||||||||||||||||||| ||||||||||||| | ||| |||||||| || | Sbjct: 486 ataagtttgatgacaagtactttgcccgggacaagaaggcaaaggccaagaagaccgagg 545 Query: 544 gggagctgtttgagactgagaaggaggcaaccaagaacctgcctgacttcaaaaaggatg 603 | || || |||||||| |||||||||||||||||||| ||||| |||||||| ||||||| Sbjct: 546 gtgaactttttgagacagagaaggaggcaaccaagaatctgcccgacttcaagaaggatg 605 Query: 604 accagaaggccattgatgctgagttgatcaaggctatcgatgctgtccctgaccttaaga 663 |||||||||| | |||||||||||||||||||||||||| | |||||| ||||| || Sbjct: 606 accagaaggctgtggatgctgagttgatcaaggctatcgaggttgtcccagacctgaaat 665 Query: 664 actatcttggtgcccggttctctctcagggacggtgacaagccccatgagatgaccttct 723 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 666 cctatcttggtgcccggttctctctcagggacggcgacaagccccatgagatgacattct 725 Query: 724 aagtt 728 ||||| Sbjct: 726 aagtt 730
>ref|NM_001053823.1| Oryza sativa (japonica cultivar-group) Os02g0591700 (Os02g0591700) mRNA, complete cds Length = 964 Score = 850 bits (429), Expect = 0.0 Identities = 606/665 (91%) Strand = Plus / Plus Query: 64 caatggcgccgacgtccaagatggcgctgggcatcaagcgcgcgtcgcggtcgcactcct 123 |||||||||||||||| ||| || ||| |||||||||||||||||||||||||||| ||| Sbjct: 68 caatggcgccgacgtcgaagctgtcgcagggcatcaagcgcgcgtcgcggtcgcacacct 127 Query: 124 accaccgccgcgggctctgggccatcaaggccaagaacggcggagccttcccaaaggccg 183 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 128 accaccgccgcgggctctgggccatcaaggccaagaacggcggcaccttccccaaggccg 187 Query: 184 agaagccagccgccgtcgccgagcccaagttctaccccgccgacgacgtcaagccccgca 243 ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 gcaagcccgccgccgccgccgagcccaagttctaccccgccgacgacgtcaagccccgcg 247 Query: 244 ccgccagcacccgcaagcccaaacctaccaagctcaggtcgaccatcacgcccggcacgg 303 || |||||||||||||| |||| ||||||||||||||||||||||||||||| || |||| Sbjct: 248 cccccagcacccgcaaggccaaccctaccaagctcaggtcgaccatcacgccggggacgg 307 Query: 304 tgctgatcctgctcgctgggaggtacatggggaagcgcgtggtgttcctcaagcagctca 363 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 308 tgctgatcctgctcgccgggaggtacatggggaagcgcgtcgtgttcctcaagcagctca 367 Query: 364 agtctggcctgctcctcatcactggacctttcaagatcaatggtgtcccagttcgccggg 423 |||| ||||||||||||||||| |||||||| ||||||||||| || || | ||||| | Sbjct: 368 agtccggcctgctcctcatcaccggaccttttaagatcaatggagtgcccatccgccgtg 427 Query: 424 tgaaccaggcttatgtcattgccacatccacaaaggttgacatctctggtgttaaggtgg 483 |||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 428 tgaaccaggcctacgtcattgccacatccacgaaggttgacatctctggtgttaaggtgg 487 Query: 484 agaagtttgatgacaagtactttgctagggacaagaaggccagggcaaagaagactgaag 543 | ||||||||||||||||||||||| ||||||||||||| | ||| |||||||| || | Sbjct: 488 ataagtttgatgacaagtactttgcccgggacaagaaggcaaaggccaagaagaccgagg 547 Query: 544 gggagctgtttgagactgagaaggaggcaaccaagaacctgcctgacttcaaaaaggatg 603 | || || |||||||| |||||||||||||||||||| ||||| |||||||| ||||||| Sbjct: 548 gtgaactttttgagacagagaaggaggcaaccaagaatctgcccgacttcaagaaggatg 607 Query: 604 accagaaggccattgatgctgagttgatcaaggctatcgatgctgtccctgaccttaaga 663 |||||||||| | |||||||||||||||||||||||||| | |||||| ||||| || Sbjct: 608 accagaaggctgtggatgctgagttgatcaaggctatcgaggttgtcccagacctgaaat 667 Query: 664 actatcttggtgcccggttctctctcagggacggtgacaagccccatgagatgaccttct 723 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 668 cctatcttggtgcccggttctctctcagggacggcgacaagccccatgagatgacattct 727 Query: 724 aagtt 728 ||||| Sbjct: 728 aagtt 732
>dbj|AK072777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139B06, full insert sequence Length = 1030 Score = 850 bits (429), Expect = 0.0 Identities = 606/665 (91%) Strand = Plus / Plus Query: 64 caatggcgccgacgtccaagatggcgctgggcatcaagcgcgcgtcgcggtcgcactcct 123 |||||||||||||||| ||| || ||| |||||||||||||||||||||||||||| ||| Sbjct: 69 caatggcgccgacgtcgaagctgtcgcagggcatcaagcgcgcgtcgcggtcgcacacct 128 Query: 124 accaccgccgcgggctctgggccatcaaggccaagaacggcggagccttcccaaaggccg 183 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 129 accaccgccgcgggctctgggccatcaaggccaagaacggcggcaccttccccaaggccg 188 Query: 184 agaagccagccgccgtcgccgagcccaagttctaccccgccgacgacgtcaagccccgca 243 ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 gcaagcccgccgccgccgccgagcccaagttctaccccgccgacgacgtcaagccccgcg 248 Query: 244 ccgccagcacccgcaagcccaaacctaccaagctcaggtcgaccatcacgcccggcacgg 303 || |||||||||||||| |||| ||||||||||||||||||||||||||||| || |||| Sbjct: 249 cccccagcacccgcaaggccaaccctaccaagctcaggtcgaccatcacgccggggacgg 308 Query: 304 tgctgatcctgctcgctgggaggtacatggggaagcgcgtggtgttcctcaagcagctca 363 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 309 tgctgatcctgctcgccgggaggtacatggggaagcgcgtcgtgttcctcaagcagctca 368 Query: 364 agtctggcctgctcctcatcactggacctttcaagatcaatggtgtcccagttcgccggg 423 |||| ||||||||||||||||| |||||||| ||||||||||| || || | ||||| | Sbjct: 369 agtccggcctgctcctcatcaccggaccttttaagatcaatggagtgcccatccgccgtg 428 Query: 424 tgaaccaggcttatgtcattgccacatccacaaaggttgacatctctggtgttaaggtgg 483 |||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 429 tgaaccaggcctacgtcattgccacatccacgaaggttgacatctctggtgttaaggtgg 488 Query: 484 agaagtttgatgacaagtactttgctagggacaagaaggccagggcaaagaagactgaag 543 | ||||||||||||||||||||||| ||||||||||||| | ||| |||||||| || | Sbjct: 489 ataagtttgatgacaagtactttgcccgggacaagaaggcaaaggccaagaagaccgagg 548 Query: 544 gggagctgtttgagactgagaaggaggcaaccaagaacctgcctgacttcaaaaaggatg 603 | || || |||||||| |||||||||||||||||||| ||||| |||||||| ||||||| Sbjct: 549 gtgaactttttgagacagagaaggaggcaaccaagaatctgcccgacttcaagaaggatg 608 Query: 604 accagaaggccattgatgctgagttgatcaaggctatcgatgctgtccctgaccttaaga 663 |||||||||| | |||||||||||||||||||||||||| | |||||| ||||| || Sbjct: 609 accagaaggctgtggatgctgagttgatcaaggctatcgaggttgtcccagacctgaaat 668 Query: 664 actatcttggtgcccggttctctctcagggacggtgacaagccccatgagatgaccttct 723 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 669 cctatcttggtgcccggttctctctcagggacggcgacaagccccatgagatgacattct 728 Query: 724 aagtt 728 ||||| Sbjct: 729 aagtt 733
>gb|AY846820.1| Triticum aestivum ribosomal protein L6 mRNA, complete cds Length = 686 Score = 757 bits (382), Expect = 0.0 Identities = 595/666 (89%) Strand = Plus / Plus Query: 63 ccaatggcgccgacgtccaagatggcgctgggcatcaagcgcgcgtcgcggtcgcactcc 122 |||||||| |||||||| ||||||||||| ||||| ||||| |||||| | |||||| || Sbjct: 17 ccaatggctccgacgtcgaagatggcgctcggcataaagcgggcgtcgagatcgcacacc 76 Query: 123 taccaccgccgcgggctctgggccatcaaggccaagaacggcggagccttcccaaaggcc 182 ||||||||||||||||| |||||||||||||||||| ||||||| ||||| || |||||| Sbjct: 77 taccaccgccgcgggctttgggccatcaaggccaagcacggcggcgccttgcccaaggcc 136 Query: 183 gagaagccagccgccgtcgccgagcccaagttctaccccgccgacgacgtcaagccccgc 242 |||||||| |||||| ||||||||||||||||||| ||||| || || |||||||| ||| Sbjct: 137 gagaagccggccgccatcgccgagcccaagttctatcccgctgatgatgtcaagccacgc 196 Query: 243 accgccagcacccgcaagcccaaacctaccaagctcaggtcgaccatcacgcccggcacg 302 |||| ||||| ||||||||| | || ||||||||||||||||||||||| || |||||| Sbjct: 197 accgtgagcacacgcaagccccatcccaccaagctcaggtcgaccatcacaccgggcacg 256 Query: 303 gtgctgatcctgctcgctgggaggtacatggggaagcgcgtggtgttcctcaagcagctc 362 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 257 gtgctgatcctgctcgcggggaggtacatgggaaagcgcgtggtgttcctcaagcagctc 316 Query: 363 aagtctggcctgctcctcatcactggacctttcaagatcaatggtgtcccagttcgccgg 422 |||| ||||| |||||||||||||||||||||||||||||||| || ||| | ||| | Sbjct: 317 cagtccggccttctcctcatcactggacctttcaagatcaatggcgtgccaatccgcaga 376 Query: 423 gtgaaccaggcttatgtcattgccacatccacaaaggttgacatctctggtgttaaggtg 482 |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||| ||| Sbjct: 377 gtgaaccaggcttacgtcattgccacatccacaaaggtcgacatctctaaggttaatgtg 436 Query: 483 gagaagtttgatgacaagtactttgctagggacaagaaggccagggcaaagaagactgaa 542 |||||||||||||||||||||| |||||||| |||||| | ||||||||||||||||| Sbjct: 437 cagaagtttgatgacaagtacttcgctagggagaagaagactagggcaaagaagactgag 496 Query: 543 ggggagctgtttgagactgagaaggaggcaaccaagaacctgcctgacttcaaaaaggat 602 || ||||| |||||| | || ||||||||||||||||| |||| |||||||| |||||| Sbjct: 497 ggcgagctatttgagtcggataaggaggcaaccaagaatttgccagacttcaagaaggat 556 Query: 603 gaccagaaggccattgatgctgagttgatcaaggctatcgatgctgtccctgaccttaag 662 |||||||||| |||||| |||||||||||||||||||||||||| ||||| |||||||| Sbjct: 557 gaccagaaggtcattgacgctgagttgatcaaggctatcgatgccgtcccagaccttaaa 616 Query: 663 aactatcttggtgcccggttctctctcagggacggtgacaagccccatgagatgaccttc 722 || |||||||||||||||||||| |||||||| || |||||||| |||||||||||||| Sbjct: 617 aattatcttggtgcccggttctccctcagggatggcgacaagccgcatgagatgaccttt 676 Query: 723 taagtt 728 |||||| Sbjct: 677 taagtt 682
>ref|NM_001059600.1| Oryza sativa (japonica cultivar-group) Os04g0473400 (Os04g0473400) mRNA, partial cds Length = 932 Score = 609 bits (307), Expect = e-171 Identities = 573/663 (86%), Gaps = 9/663 (1%) Strand = Plus / Plus Query: 63 ccaatggcgccgacgtccaagatggcgctgggcatcaagcgcgcgtcgcggtcgcactcc 122 ||||||||||||||||| ||| || ||| |||||||||| ||||||||||||||| | Sbjct: 51 ccaatggcgccgacgtcgaagctgtcgcagggcatcaagaaggcgtcgcggtcgcacacg 110 Query: 123 taccaccgccgcgggctctgggccatcaaggccaagaacggcggagccttcccaaaggcc 182 ||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 111 taccaccgccgcgggctgtgggccatcaaggccaagcacggcggcgccttccccaaggcc 170 Query: 183 gagaagcc---------agccgccgtcgccgagcccaagttctaccccgccgacgacgtc 233 |||||||| |||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 171 gagaagcccgccgccgcagccgccgccgccgcgcccaagttctaccccgccgacgacgtc 230 Query: 234 aagccccgcaccgccagcacccgcaagcccaaacctaccaagctcaggtcgaccatcacg 293 ||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 231 aagccccgccagcccagcacccgcaagcccaaccctaccaagctcaggtcgtccatcacg 290 Query: 294 cccggcacggtgctgatcctgctcgctgggaggtacatggggaagcgcgtggtgttcctc 353 || || || ||||||||||||||||| ||||||| ||||||||||||||| ||||||||| Sbjct: 291 cctgggacagtgctgatcctgctcgccgggaggttcatggggaagcgcgtcgtgttcctc 350 Query: 354 aagcagctcaagtctggcctgctcctcatcactggacctttcaagatcaatggtgtccca 413 ||||||||||| || |||||||| ||| |||| |||||||| ||||||||||| || || Sbjct: 351 aagcagctcaaatccggcctgcttctcgtcaccggaccttttaagatcaatggagttccg 410 Query: 414 gttcgccgggtgaaccaggcttatgtcattgccacatccacaaaggttgacatctctggt 473 | ||||| ||||||||| | || |||||||| || |||||||||||||| ||||||||| Sbjct: 411 atccgccgtgtgaaccagccctacgtcattgctacgtccacaaaggttgatatctctggt 470 Query: 474 gttaaggtggagaagtttgatgacaagtactttgctagggacaagaaggccagggcaaag 533 ||||| |||||||||||||||||||||||||| |||||||||||||| | ||| ||| Sbjct: 471 gttaatgtggagaagtttgatgacaagtacttctctagggacaagaagcagaaggcgaag 530 Query: 534 aagactgaaggggagctgtttgagactgagaaggaggcaaccaagaacctgcctgacttc 593 ||||| || || || || ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 531 aagaccgagggtgaactttttgagactgagaaggaggcaaccaagaacctgccggagttc 590 Query: 594 aaaaaggatgaccagaaggccattgatgctgagttgatcaaggctatcgatgctgtccct 653 |||||||| |||||||| | | ||||| ||||||||||| ||||| || |||||||| Sbjct: 591 aaaaaggaggaccagaaagttgtggatgccgagttgatcaaagctattgaagctgtcccg 650 Query: 654 gaccttaagaactatcttggtgcccggttctctctcagggacggtgacaagccccatgag 713 || || || | || |||||||| ||||| |||||||||||||| ||||||||||| ||| Sbjct: 651 gatctgaaaacttaccttggtgcgcggttttctctcagggacggcgacaagccccacgag 710 Query: 714 atg 716 ||| Sbjct: 711 atg 713
>dbj|AK067896.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123D20, full insert sequence Length = 933 Score = 609 bits (307), Expect = e-171 Identities = 573/663 (86%), Gaps = 9/663 (1%) Strand = Plus / Plus Query: 63 ccaatggcgccgacgtccaagatggcgctgggcatcaagcgcgcgtcgcggtcgcactcc 122 ||||||||||||||||| ||| || ||| |||||||||| ||||||||||||||| | Sbjct: 52 ccaatggcgccgacgtcgaagctgtcgcagggcatcaagaaggcgtcgcggtcgcacacg 111 Query: 123 taccaccgccgcgggctctgggccatcaaggccaagaacggcggagccttcccaaaggcc 182 ||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 112 taccaccgccgcgggctgtgggccatcaaggccaagcacggcggcgccttccccaaggcc 171 Query: 183 gagaagcc---------agccgccgtcgccgagcccaagttctaccccgccgacgacgtc 233 |||||||| |||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 172 gagaagcccgccgccgcagccgccgccgccgcgcccaagttctaccccgccgacgacgtc 231 Query: 234 aagccccgcaccgccagcacccgcaagcccaaacctaccaagctcaggtcgaccatcacg 293 ||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 232 aagccccgccagcccagcacccgcaagcccaaccctaccaagctcaggtcgtccatcacg 291 Query: 294 cccggcacggtgctgatcctgctcgctgggaggtacatggggaagcgcgtggtgttcctc 353 || || || ||||||||||||||||| ||||||| ||||||||||||||| ||||||||| Sbjct: 292 cctgggacagtgctgatcctgctcgccgggaggttcatggggaagcgcgtcgtgttcctc 351 Query: 354 aagcagctcaagtctggcctgctcctcatcactggacctttcaagatcaatggtgtccca 413 ||||||||||| || |||||||| ||| |||| |||||||| ||||||||||| || || Sbjct: 352 aagcagctcaaatccggcctgcttctcgtcaccggaccttttaagatcaatggagttccg 411 Query: 414 gttcgccgggtgaaccaggcttatgtcattgccacatccacaaaggttgacatctctggt 473 | ||||| ||||||||| | || |||||||| || |||||||||||||| ||||||||| Sbjct: 412 atccgccgtgtgaaccagccctacgtcattgctacgtccacaaaggttgatatctctggt 471 Query: 474 gttaaggtggagaagtttgatgacaagtactttgctagggacaagaaggccagggcaaag 533 ||||| |||||||||||||||||||||||||| |||||||||||||| | ||| ||| Sbjct: 472 gttaatgtggagaagtttgatgacaagtacttctctagggacaagaagcagaaggcgaag 531 Query: 534 aagactgaaggggagctgtttgagactgagaaggaggcaaccaagaacctgcctgacttc 593 ||||| || || || || ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 532 aagaccgagggtgaactttttgagactgagaaggaggcaaccaagaacctgccggagttc 591 Query: 594 aaaaaggatgaccagaaggccattgatgctgagttgatcaaggctatcgatgctgtccct 653 |||||||| |||||||| | | ||||| ||||||||||| ||||| || |||||||| Sbjct: 592 aaaaaggaggaccagaaagttgtggatgccgagttgatcaaagctattgaagctgtcccg 651 Query: 654 gaccttaagaactatcttggtgcccggttctctctcagggacggtgacaagccccatgag 713 || || || | || |||||||| ||||| |||||||||||||| ||||||||||| ||| Sbjct: 652 gatctgaaaacttaccttggtgcgcggttttctctcagggacggcgacaagccccacgag 711 Query: 714 atg 716 ||| Sbjct: 712 atg 714
>gb|AY103559.1| Zea mays PCO112591 mRNA sequence Length = 1361 Score = 559 bits (282), Expect = e-156 Identities = 561/654 (85%) Strand = Plus / Plus Query: 63 ccaatggcgccgacgtccaagatggcgctgggcatcaagcgcgcgtcgcggtcgcactcc 122 ||||||||||||||||| ||| || || ||||||||||||||| |||||||||||| | Sbjct: 402 ccaatggcgccgacgtcgaagctgtcgacgggcatcaagcgcgcttcgcggtcgcacacg 461 Query: 123 taccaccgccgcgggctctgggccatcaaggccaagaacggcggagccttcccaaaggcc 182 ||||| ||||| ||||| |||||||||||||||||||||||||| |||||||| |||||| Sbjct: 462 taccatcgccgtgggctgtgggccatcaaggccaagaacggcggcgccttccccaaggcc 521 Query: 183 gagaagccagccgccgtcgccgagcccaagttctaccccgccgacgacgtcaagccccgc 242 || ||| | ||||||| || || |||||||||||||| ||||||||||||||||||||| Sbjct: 522 gacaaggccgccgccgccgtggaacccaagttctaccctgccgacgacgtcaagccccgc 581 Query: 243 accgccagcacccgcaagcccaaacctaccaagctcaggtcgaccatcacgcccggcacg 302 |||||||||||||||| || ||||||||||||||||||| ||||||||| || ||| Sbjct: 582 gttcccagcacccgcaagcctaagcctaccaagctcaggtcgagcatcacgcctgggacg 641 Query: 303 gtgctgatcctgctcgctgggaggtacatggggaagcgcgtggtgttcctcaagcagctc 362 ||||||||||| ||||| ||| | | |||||||||| | |||||||| |||||||||||| Sbjct: 642 gtgctgatcctcctcgcagggcgcttcatggggaagagagtggtgtttctcaagcagctc 701 Query: 363 aagtctggcctgctcctcatcactggacctttcaagatcaatggtgtcccagttcgccgg 422 ||||||||||||||||| ||| |||| ||||||||||||||||| || || | ||||| Sbjct: 702 aagtctggcctgctccttatctctgggcctttcaagatcaatggagtaccgatccgccgt 761 Query: 423 gtgaaccaggcttatgtcattgccacatccacaaaggttgacatctctggtgttaaggtg 482 ||||||||| | ||||||||||| ||||| || || |||||||||||||||||| | || Sbjct: 762 gtgaaccagacctatgtcattgctacatcaaccaaagttgacatctctggtgttgatgtc 821 Query: 483 gagaagtttgatgacaagtactttgctagggacaagaaggccagggcaaagaagactgaa 542 | ||||||||||||||||||||||| ||||| |||||| | || |||||||| || Sbjct: 822 gccaagtttgatgacaagtactttgccagggagaagaagcagaaggtgaagaagaccgag 881 Query: 543 ggggagctgtttgagactgagaaggaggcaaccaagaacctgcctgacttcaaaaaggat 602 || ||||| |||||||| || ||||||||| ||||| |||||||||||||| |||||| Sbjct: 882 ggcgagctttttgagacagaaaaggaggcatccaagtcactgcctgacttcaagaaggat 941 Query: 603 gaccagaaggccattgatgctgagttgatcaaggctatcgatgctgtccctgaccttaag 662 ||||||||||| | ||| ||| |||||||||||||||| ||||||| || || || Sbjct: 942 gaccagaaggctgtggattctgctctgatcaaggctatcgaggctgtcctggagctgaaa 1001 Query: 663 aactatcttggtgcccggttctctctcagggacggtgacaagccccatgagatg 716 | ||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1002 acctatcttggcgcccggttctctctcagggatggtgacaagccccatgagatg 1055
>gb|DQ245860.1| Zea mays clone 21040 mRNA sequence Length = 970 Score = 537 bits (271), Expect = e-149 Identities = 553/647 (85%) Strand = Plus / Plus Query: 62 cccaatggcgccgacgtccaagatggcgctgggcatcaagcgcgcgtcgcggtcgcactc 121 |||||||||||||||||| ||| || || ||||||||||||||||||||||||||||| | Sbjct: 59 cccaatggcgccgacgtcgaagctgtcgatgggcatcaagcgcgcgtcgcggtcgcacgc 118 Query: 122 ctaccaccgccgcgggctctgggccatcaaggccaagaacggcggagccttcccaaaggc 181 ||||||||||| |||||||||||||||||||||||||||||||| | |||||| ||||| Sbjct: 119 gtaccaccgccgtgggctctgggccatcaaggccaagaacggcggcgtcttccccaaggc 178 Query: 182 cgagaagccagccgccgtcgccgagcccaagttctaccccgccgacgacgtcaagccccg 241 ||||||||| ||||||| ||| || |||||||||||||||||||||||||||||||| || Sbjct: 179 cgagaagcccgccgccgccgcggaacccaagttctaccccgccgacgacgtcaagcctcg 238 Query: 242 caccgccagcacccgcaagcccaaacctaccaagctcaggtcgaccatcacgcccggcac 301 | |||||||||||||||| || || |||||||||||||||| ||||||||| || || Sbjct: 239 cgttcccagcacccgcaagcctaatcccaccaagctcaggtcgagcatcacgcctgggac 298 Query: 302 ggtgctgatcctgctcgctgggaggtacatggggaagcgcgtggtgttcctcaagcagct 361 |||||||||||| ||||| ||| | | |||||||||| | |||||||||||||||||||| Sbjct: 299 ggtgctgatcctcctcgcggggcgcttcatggggaagagagtggtgttcctcaagcagct 358 Query: 362 caagtctggcctgctcctcatcactggacctttcaagatcaatggtgtcccagttcgccg 421 ||| || |||||||||||| || |||| || |||||||||||||| || || | || || Sbjct: 359 caactccggcctgctcctcgtctctggtccattcaagatcaatggagtaccgatccgtcg 418 Query: 422 ggtgaaccaggcttatgtcattgccacatccacaaaggttgacatctctggtgttaaggt 481 || |||||| | ||||||||||| ||||| || ||||||||||||||||||||| | || Sbjct: 419 tgtcaaccagacctatgtcattgctacatcaaccaaggttgacatctctggtgttgatgt 478 Query: 482 ggagaagtttgatgacaagtactttgctagggacaagaaggccagggcaaagaagactga 541 | |||||||||||||||||||||||| ||||| || ||| | || |||||||| || Sbjct: 479 cgcgaagtttgatgacaagtactttgccagggagaaaaagcagaaggtgaagaagacgga 538 Query: 542 aggggagctgtttgagactgagaaggaggcaaccaagaacctgcctgacttcaaaaagga 601 || ||||| |||||||| ||||||||||| ||||| ||||||| ||||||||||| Sbjct: 539 gggtgagctttttgagacagagaaggaggcgtccaagtttttgcctgatttcaaaaagga 598 Query: 602 tgaccagaaggccattgatgctgagttgatcaaggctatcgatgctgtccctgaccttaa 661 ||||||||||||| | ||||||| |||||||||||||| || ||| |||| || || || Sbjct: 599 tgaccagaaggccgtggatgctgctttgatcaaggctattgaggctatcccagagctgaa 658 Query: 662 gaactatcttggtgcccggttctctctcagggacggtgacaagcccc 708 | ||||||||| || ||||| || || ||||| ||||||||||||| Sbjct: 659 ggcctatcttggcgctcggttttcccttagggatggtgacaagcccc 705
>gb|DQ245478.1| Zea mays clone 15922 mRNA sequence Length = 827 Score = 436 bits (220), Expect = e-119 Identities = 436/508 (85%) Strand = Plus / Plus Query: 63 ccaatggcgccgacgtccaagatggcgctgggcatcaagcgcgcgtcgcggtcgcactcc 122 ||||||||||||||||| ||| || || ||||||||||||||| |||||||||||| | Sbjct: 62 ccaatggcgccgacgtcgaagctgtcgacgggcatcaagcgcgcttcgcggtcgcacacg 121 Query: 123 taccaccgccgcgggctctgggccatcaaggccaagaacggcggagccttcccaaaggcc 182 ||||| ||||| ||||| |||||||||||||||||||||||||| |||||||| |||||| Sbjct: 122 taccatcgccgtgggctgtgggccatcaaggccaagaacggcggcgccttccccaaggcc 181 Query: 183 gagaagccagccgccgtcgccgagcccaagttctaccccgccgacgacgtcaagccccgc 242 || ||| | ||||||| || || |||||||||||||| ||||||||||||||||||||| Sbjct: 182 gacaaggccgccgccgccgtggaacccaagttctaccctgccgacgacgtcaagccccgc 241 Query: 243 accgccagcacccgcaagcccaaacctaccaagctcaggtcgaccatcacgcccggcacg 302 |||||||||||||||| || ||||||||||||||||||| ||||||||| || ||| Sbjct: 242 gttcccagcacccgcaagcctaagcctaccaagctcaggtcgagcatcacgcctgggacg 301 Query: 303 gtgctgatcctgctcgctgggaggtacatggggaagcgcgtggtgttcctcaagcagctc 362 ||||||||||| ||||| ||| | | |||||||||| | |||||||| |||||||||||| Sbjct: 302 gtgctgatcctcctcgcagggcgcttcatggggaagagagtggtgtttctcaagcagctc 361 Query: 363 aagtctggcctgctcctcatcactggacctttcaagatcaatggtgtcccagttcgccgg 422 ||||||||||||||||| ||| |||| ||||||||||||||||| || || | ||||| Sbjct: 362 aagtctggcctgctccttatctctgggcctttcaagatcaatggagtaccgatccgccgt 421 Query: 423 gtgaaccaggcttatgtcattgccacatccacaaaggttgacatctctggtgttaaggtg 482 ||||||||| | ||||||||||| ||||| || || |||||||||||||||||| | || Sbjct: 422 gtgaaccagacctatgtcattgctacatcaaccaaagttgacatctctggtgttgatgtc 481 Query: 483 gagaagtttgatgacaagtactttgctagggacaagaaggccagggcaaagaagactgaa 542 | ||||||||||||||||||||||| ||||| |||||| | || |||||||| || Sbjct: 482 gccaagtttgatgacaagtactttgccagggagaagaagcagaaggtgaagaagaccgag 541 Query: 543 ggggagctgtttgagactgagaaggagg 570 || ||||| |||||||| || ||||||| Sbjct: 542 ggcgagctttttgagacagaaaaggagg 569
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 309 bits (156), Expect = 1e-80 Identities = 204/220 (92%) Strand = Plus / Minus Query: 64 caatggcgccgacgtccaagatggcgctgggcatcaagcgcgcgtcgcggtcgcactcct 123 |||||||||||||||| ||| || ||| |||||||||||||||||||||||||||| ||| Sbjct: 22903482 caatggcgccgacgtcgaagctgtcgcagggcatcaagcgcgcgtcgcggtcgcacacct 22903423 Query: 124 accaccgccgcgggctctgggccatcaaggccaagaacggcggagccttcccaaaggccg 183 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 22903422 accaccgccgcgggctctgggccatcaaggccaagaacggcggcaccttccccaaggccg 22903363 Query: 184 agaagccagccgccgtcgccgagcccaagttctaccccgccgacgacgtcaagccccgca 243 ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22903362 gcaagcccgccgccgccgccgagcccaagttctaccccgccgacgacgtcaagccccgcg 22903303 Query: 244 ccgccagcacccgcaagcccaaacctaccaagctcaggtc 283 || |||||||||||||| |||| ||||||||||||||||| Sbjct: 22903302 cccccagcacccgcaaggccaaccctaccaagctcaggtc 22903263 Score = 200 bits (101), Expect = 6e-48 Identities = 146/161 (90%) Strand = Plus / Minus Query: 568 aggcaaccaagaacctgcctgacttcaaaaaggatgaccagaaggccattgatgctgagt 627 ||||||||||||| ||||| |||||||| ||||||||||||||||| | |||||||||| Sbjct: 22901950 aggcaaccaagaatctgcccgacttcaagaaggatgaccagaaggctgtggatgctgagt 22901891 Query: 628 tgatcaaggctatcgatgctgtccctgaccttaagaactatcttggtgcccggttctctc 687 |||||||||||||||| | |||||| ||||| || ||||||||||||||||||||||| Sbjct: 22901890 tgatcaaggctatcgaggttgtcccagacctgaaatcctatcttggtgcccggttctctc 22901831 Query: 688 tcagggacggtgacaagccccatgagatgaccttctaagtt 728 |||||||||| |||||||||||||||||||| ||||||||| Sbjct: 22901830 tcagggacggcgacaagccccatgagatgacattctaagtt 22901790 Score = 190 bits (96), Expect = 6e-45 Identities = 162/184 (88%) Strand = Plus / Minus Query: 387 ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 446 |||||||| ||||||||||| || || | ||||| ||||||||||| || ||||||||| Sbjct: 22902225 ggaccttttaagatcaatggagtgcccatccgccgtgtgaaccaggcctacgtcattgcc 22902166 Query: 447 acatccacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagtacttt 506 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 22902165 acatccacgaaggttgacatctctggtgttaaggtggataagtttgatgacaagtacttt 22902106 Query: 507 gctagggacaagaaggccagggcaaagaagactgaaggggagctgtttgagactgagaag 566 || ||||||||||||| | ||| |||||||| || || || || |||||||| |||||| Sbjct: 22902105 gcccgggacaagaaggcaaaggccaagaagaccgagggtgaactttttgagacagagaag 22902046 Query: 567 gagg 570 |||| Sbjct: 22902045 gagg 22902042 Score = 174 bits (88), Expect = 4e-40 Identities = 103/108 (95%) Strand = Plus / Minus Query: 278 caggtcgaccatcacgcccggcacggtgctgatcctgctcgctgggaggtacatggggaa 337 |||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 22903171 caggtcgaccatcacgccggggacggtgctgatcctgctcgccgggaggtacatggggaa 22903112 Query: 338 gcgcgtggtgttcctcaagcagctcaagtctggcctgctcctcatcac 385 |||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 22903111 gcgcgtcgtgttcctcaagcagctcaagtccggcctgctcctcatcac 22903064
>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0016G10 Length = 143211 Score = 309 bits (156), Expect = 1e-80 Identities = 204/220 (92%) Strand = Plus / Minus Query: 64 caatggcgccgacgtccaagatggcgctgggcatcaagcgcgcgtcgcggtcgcactcct 123 |||||||||||||||| ||| || ||| |||||||||||||||||||||||||||| ||| Sbjct: 23284 caatggcgccgacgtcgaagctgtcgcagggcatcaagcgcgcgtcgcggtcgcacacct 23225 Query: 124 accaccgccgcgggctctgggccatcaaggccaagaacggcggagccttcccaaaggccg 183 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 23224 accaccgccgcgggctctgggccatcaaggccaagaacggcggcaccttccccaaggccg 23165 Query: 184 agaagccagccgccgtcgccgagcccaagttctaccccgccgacgacgtcaagccccgca 243 ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23164 gcaagcccgccgccgccgccgagcccaagttctaccccgccgacgacgtcaagccccgcg 23105 Query: 244 ccgccagcacccgcaagcccaaacctaccaagctcaggtc 283 || |||||||||||||| |||| ||||||||||||||||| Sbjct: 23104 cccccagcacccgcaaggccaaccctaccaagctcaggtc 23065 Score = 200 bits (101), Expect = 6e-48 Identities = 146/161 (90%) Strand = Plus / Minus Query: 568 aggcaaccaagaacctgcctgacttcaaaaaggatgaccagaaggccattgatgctgagt 627 ||||||||||||| ||||| |||||||| ||||||||||||||||| | |||||||||| Sbjct: 21752 aggcaaccaagaatctgcccgacttcaagaaggatgaccagaaggctgtggatgctgagt 21693 Query: 628 tgatcaaggctatcgatgctgtccctgaccttaagaactatcttggtgcccggttctctc 687 |||||||||||||||| | |||||| ||||| || ||||||||||||||||||||||| Sbjct: 21692 tgatcaaggctatcgaggttgtcccagacctgaaatcctatcttggtgcccggttctctc 21633 Query: 688 tcagggacggtgacaagccccatgagatgaccttctaagtt 728 |||||||||| |||||||||||||||||||| ||||||||| Sbjct: 21632 tcagggacggcgacaagccccatgagatgacattctaagtt 21592 Score = 190 bits (96), Expect = 6e-45 Identities = 162/184 (88%) Strand = Plus / Minus Query: 387 ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 446 |||||||| ||||||||||| || || | ||||| ||||||||||| || ||||||||| Sbjct: 22027 ggaccttttaagatcaatggagtgcccatccgccgtgtgaaccaggcctacgtcattgcc 21968 Query: 447 acatccacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagtacttt 506 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 21967 acatccacgaaggttgacatctctggtgttaaggtggataagtttgatgacaagtacttt 21908 Query: 507 gctagggacaagaaggccagggcaaagaagactgaaggggagctgtttgagactgagaag 566 || ||||||||||||| | ||| |||||||| || || || || |||||||| |||||| Sbjct: 21907 gcccgggacaagaaggcaaaggccaagaagaccgagggtgaactttttgagacagagaag 21848 Query: 567 gagg 570 |||| Sbjct: 21847 gagg 21844 Score = 174 bits (88), Expect = 4e-40 Identities = 103/108 (95%) Strand = Plus / Minus Query: 278 caggtcgaccatcacgcccggcacggtgctgatcctgctcgctgggaggtacatggggaa 337 |||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 22973 caggtcgaccatcacgccggggacggtgctgatcctgctcgccgggaggtacatggggaa 22914 Query: 338 gcgcgtggtgttcctcaagcagctcaagtctggcctgctcctcatcac 385 |||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 22913 gcgcgtcgtgttcctcaagcagctcaagtccggcctgctcctcatcac 22866
>dbj|AP005640.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0006O15 Length = 139723 Score = 309 bits (156), Expect = 1e-80 Identities = 204/220 (92%) Strand = Plus / Minus Query: 64 caatggcgccgacgtccaagatggcgctgggcatcaagcgcgcgtcgcggtcgcactcct 123 |||||||||||||||| ||| || ||| |||||||||||||||||||||||||||| ||| Sbjct: 136820 caatggcgccgacgtcgaagctgtcgcagggcatcaagcgcgcgtcgcggtcgcacacct 136761 Query: 124 accaccgccgcgggctctgggccatcaaggccaagaacggcggagccttcccaaaggccg 183 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 136760 accaccgccgcgggctctgggccatcaaggccaagaacggcggcaccttccccaaggccg 136701 Query: 184 agaagccagccgccgtcgccgagcccaagttctaccccgccgacgacgtcaagccccgca 243 ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136700 gcaagcccgccgccgccgccgagcccaagttctaccccgccgacgacgtcaagccccgcg 136641 Query: 244 ccgccagcacccgcaagcccaaacctaccaagctcaggtc 283 || |||||||||||||| |||| ||||||||||||||||| Sbjct: 136640 cccccagcacccgcaaggccaaccctaccaagctcaggtc 136601 Score = 200 bits (101), Expect = 6e-48 Identities = 146/161 (90%) Strand = Plus / Minus Query: 568 aggcaaccaagaacctgcctgacttcaaaaaggatgaccagaaggccattgatgctgagt 627 ||||||||||||| ||||| |||||||| ||||||||||||||||| | |||||||||| Sbjct: 135288 aggcaaccaagaatctgcccgacttcaagaaggatgaccagaaggctgtggatgctgagt 135229 Query: 628 tgatcaaggctatcgatgctgtccctgaccttaagaactatcttggtgcccggttctctc 687 |||||||||||||||| | |||||| ||||| || ||||||||||||||||||||||| Sbjct: 135228 tgatcaaggctatcgaggttgtcccagacctgaaatcctatcttggtgcccggttctctc 135169 Query: 688 tcagggacggtgacaagccccatgagatgaccttctaagtt 728 |||||||||| |||||||||||||||||||| ||||||||| Sbjct: 135168 tcagggacggcgacaagccccatgagatgacattctaagtt 135128 Score = 190 bits (96), Expect = 6e-45 Identities = 162/184 (88%) Strand = Plus / Minus Query: 387 ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 446 |||||||| ||||||||||| || || | ||||| ||||||||||| || ||||||||| Sbjct: 135563 ggaccttttaagatcaatggagtgcccatccgccgtgtgaaccaggcctacgtcattgcc 135504 Query: 447 acatccacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagtacttt 506 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135503 acatccacgaaggttgacatctctggtgttaaggtggataagtttgatgacaagtacttt 135444 Query: 507 gctagggacaagaaggccagggcaaagaagactgaaggggagctgtttgagactgagaag 566 || ||||||||||||| | ||| |||||||| || || || || |||||||| |||||| Sbjct: 135443 gcccgggacaagaaggcaaaggccaagaagaccgagggtgaactttttgagacagagaag 135384 Query: 567 gagg 570 |||| Sbjct: 135383 gagg 135380 Score = 174 bits (88), Expect = 4e-40 Identities = 103/108 (95%) Strand = Plus / Minus Query: 278 caggtcgaccatcacgcccggcacggtgctgatcctgctcgctgggaggtacatggggaa 337 |||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 136509 caggtcgaccatcacgccggggacggtgctgatcctgctcgccgggaggtacatggggaa 136450 Query: 338 gcgcgtggtgttcctcaagcagctcaagtctggcctgctcctcatcac 385 |||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 136449 gcgcgtcgtgttcctcaagcagctcaagtccggcctgctcctcatcac 136402
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 234 bits (118), Expect = 5e-58 Identities = 201/230 (87%), Gaps = 9/230 (3%) Strand = Plus / Minus Query: 63 ccaatggcgccgacgtccaagatggcgctgggcatcaagcgcgcgtcgcggtcgcactcc 122 ||||||||||||||||| ||| || ||| |||||||||| ||||||||||||||| | Sbjct: 23638283 ccaatggcgccgacgtcgaagctgtcgcagggcatcaagaaggcgtcgcggtcgcacacg 23638224 Query: 123 taccaccgccgcgggctctgggccatcaaggccaagaacggcggagccttcccaaaggcc 182 ||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 23638223 taccaccgccgcgggctgtgggccatcaaggccaagcacggcggcgccttccccaaggcc 23638164 Query: 183 gagaagc---------cagccgccgtcgccgagcccaagttctaccccgccgacgacgtc 233 ||||||| ||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 23638163 gagaagcccgccgccgcagccgccgccgccgcgcccaagttctaccccgccgacgacgtc 23638104 Query: 234 aagccccgcaccgccagcacccgcaagcccaaacctaccaagctcaggtc 283 ||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 23638103 aagccccgccagcccagcacccgcaagcccaaccctaccaagctcaggtc 23638054 Score = 159 bits (80), Expect = 2e-35 Identities = 158/184 (85%) Strand = Plus / Minus Query: 387 ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 446 |||||||| ||||||||||| || || | ||||| ||||||||| | || |||||||| Sbjct: 23636806 ggaccttttaagatcaatggagttccgatccgccgtgtgaaccagccctacgtcattgct 23636747 Query: 447 acatccacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagtacttt 506 || |||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 23636746 acgtccacaaaggttgatatctctggtgttaatgtggagaagtttgatgacaagtacttc 23636687 Query: 507 gctagggacaagaaggccagggcaaagaagactgaaggggagctgtttgagactgagaag 566 |||||||||||||| | ||| |||||||| || || || || ||||||||||||||| Sbjct: 23636686 tctagggacaagaagcagaaggcgaagaagaccgagggtgaactttttgagactgagaag 23636627 Query: 567 gagg 570 |||| Sbjct: 23636626 gagg 23636623 Score = 127 bits (64), Expect = 8e-26 Identities = 97/108 (89%) Strand = Plus / Minus Query: 278 caggtcgaccatcacgcccggcacggtgctgatcctgctcgctgggaggtacatggggaa 337 ||||||| |||||||||| || || ||||||||||||||||| ||||||| ||||||||| Sbjct: 23637962 caggtcgtccatcacgcctgggacagtgctgatcctgctcgccgggaggttcatggggaa 23637903 Query: 338 gcgcgtggtgttcctcaagcagctcaagtctggcctgctcctcatcac 385 |||||| |||||||||||||||||||| || |||||||| ||| |||| Sbjct: 23637902 gcgcgtcgtgttcctcaagcagctcaaatccggcctgcttctcgtcac 23637855 Score = 113 bits (57), Expect = 1e-21 Identities = 126/149 (84%) Strand = Plus / Minus Query: 568 aggcaaccaagaacctgcctgacttcaaaaaggatgaccagaaggccattgatgctgagt 627 ||||||||||||||||||| || ||||||||||| |||||||| | | ||||| |||| Sbjct: 23636534 aggcaaccaagaacctgccggagttcaaaaaggaggaccagaaagttgtggatgccgagt 23636475 Query: 628 tgatcaaggctatcgatgctgtccctgaccttaagaactatcttggtgcccggttctctc 687 ||||||| ||||| || |||||||| || || || | || |||||||| ||||| |||| Sbjct: 23636474 tgatcaaagctattgaagctgtcccggatctgaaaacttaccttggtgcgcggttttctc 23636415 Query: 688 tcagggacggtgacaagccccatgagatg 716 |||||||||| ||||||||||| |||||| Sbjct: 23636414 tcagggacggcgacaagccccacgagatg 23636386
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 234 bits (118), Expect = 5e-58 Identities = 201/230 (87%), Gaps = 9/230 (3%) Strand = Plus / Minus Query: 63 ccaatggcgccgacgtccaagatggcgctgggcatcaagcgcgcgtcgcggtcgcactcc 122 ||||||||||||||||| ||| || ||| |||||||||| ||||||||||||||| | Sbjct: 80964 ccaatggcgccgacgtcgaagctgtcgcagggcatcaagaaggcgtcgcggtcgcacacg 80905 Query: 123 taccaccgccgcgggctctgggccatcaaggccaagaacggcggagccttcccaaaggcc 182 ||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 80904 taccaccgccgcgggctgtgggccatcaaggccaagcacggcggcgccttccccaaggcc 80845 Query: 183 gagaagc---------cagccgccgtcgccgagcccaagttctaccccgccgacgacgtc 233 ||||||| ||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 80844 gagaagcccgccgccgcagccgccgccgccgcgcccaagttctaccccgccgacgacgtc 80785 Query: 234 aagccccgcaccgccagcacccgcaagcccaaacctaccaagctcaggtc 283 ||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 80784 aagccccgccagcccagcacccgcaagcccaaccctaccaagctcaggtc 80735 Score = 159 bits (80), Expect = 2e-35 Identities = 158/184 (85%) Strand = Plus / Minus Query: 387 ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 446 |||||||| ||||||||||| || || | ||||| ||||||||| | || |||||||| Sbjct: 79487 ggaccttttaagatcaatggagttccgatccgccgtgtgaaccagccctacgtcattgct 79428 Query: 447 acatccacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagtacttt 506 || |||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 79427 acgtccacaaaggttgatatctctggtgttaatgtggagaagtttgatgacaagtacttc 79368 Query: 507 gctagggacaagaaggccagggcaaagaagactgaaggggagctgtttgagactgagaag 566 |||||||||||||| | ||| |||||||| || || || || ||||||||||||||| Sbjct: 79367 tctagggacaagaagcagaaggcgaagaagaccgagggtgaactttttgagactgagaag 79308 Query: 567 gagg 570 |||| Sbjct: 79307 gagg 79304 Score = 127 bits (64), Expect = 8e-26 Identities = 97/108 (89%) Strand = Plus / Minus Query: 278 caggtcgaccatcacgcccggcacggtgctgatcctgctcgctgggaggtacatggggaa 337 ||||||| |||||||||| || || ||||||||||||||||| ||||||| ||||||||| Sbjct: 80643 caggtcgtccatcacgcctgggacagtgctgatcctgctcgccgggaggttcatggggaa 80584 Query: 338 gcgcgtggtgttcctcaagcagctcaagtctggcctgctcctcatcac 385 |||||| |||||||||||||||||||| || |||||||| ||| |||| Sbjct: 80583 gcgcgtcgtgttcctcaagcagctcaaatccggcctgcttctcgtcac 80536 Score = 113 bits (57), Expect = 1e-21 Identities = 126/149 (84%) Strand = Plus / Minus Query: 568 aggcaaccaagaacctgcctgacttcaaaaaggatgaccagaaggccattgatgctgagt 627 ||||||||||||||||||| || ||||||||||| |||||||| | | ||||| |||| Sbjct: 79215 aggcaaccaagaacctgccggagttcaaaaaggaggaccagaaagttgtggatgccgagt 79156 Query: 628 tgatcaaggctatcgatgctgtccctgaccttaagaactatcttggtgcccggttctctc 687 ||||||| ||||| || |||||||| || || || | || |||||||| ||||| |||| Sbjct: 79155 tgatcaaagctattgaagctgtcccggatctgaaaacttaccttggtgcgcggttttctc 79096 Query: 688 tcagggacggtgacaagccccatgagatg 716 |||||||||| ||||||||||| |||||| Sbjct: 79095 tcagggacggcgacaagccccacgagatg 79067
>emb|CR855201.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0305E08, complete sequence Length = 141830 Score = 226 bits (114), Expect = 1e-55 Identities = 200/230 (86%), Gaps = 9/230 (3%) Strand = Plus / Minus Query: 63 ccaatggcgccgacgtccaagatggcgctgggcatcaagcgcgcgtcgcggtcgcactcc 122 ||||||||||||||||| ||| || ||| |||||||||| ||||||||||||||| | Sbjct: 121689 ccaatggcgccgacgtcgaagctgtcgcagggcatcaagaaggcgtcgcggtcgcacacg 121630 Query: 123 taccaccgccgcgggctctgggccatcaaggccaagaacggcggagccttcccaaaggcc 182 ||||||||||||||||| |||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 121629 taccaccgccgcgggctgtgggccatcaaggccaagcacggcggcgccttccccaaggcc 121570 Query: 183 gagaagc---------cagccgccgtcgccgagcccaagttctaccccgccgacgacgtc 233 ||||||| ||||||||| | ||| |||||||||||||||||||||||||||| Sbjct: 121569 gagaagcccgccgccgcagccgccgcctccgcgcccaagttctaccccgccgacgacgtc 121510 Query: 234 aagccccgcaccgccagcacccgcaagcccaaacctaccaagctcaggtc 283 ||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 121509 aagccccgccagcccagcacccgcaagcccaaccctaccaagctcaggtc 121460 Score = 159 bits (80), Expect = 2e-35 Identities = 158/184 (85%) Strand = Plus / Minus Query: 387 ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 446 |||||||| ||||||||||| || || | ||||| ||||||||| | || |||||||| Sbjct: 120212 ggaccttttaagatcaatggagttccgatccgccgtgtgaaccagccctacgtcattgct 120153 Query: 447 acatccacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagtacttt 506 || |||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 120152 acgtccacaaaggttgatatctctggtgttaatgtggagaagtttgatgacaagtacttc 120093 Query: 507 gctagggacaagaaggccagggcaaagaagactgaaggggagctgtttgagactgagaag 566 |||||||||||||| | ||| |||||||| || || || || ||||||||||||||| Sbjct: 120092 tctagggacaagaagcagaaggcgaagaagaccgagggtgaactttttgagactgagaag 120033 Query: 567 gagg 570 |||| Sbjct: 120032 gagg 120029 Score = 127 bits (64), Expect = 8e-26 Identities = 97/108 (89%) Strand = Plus / Minus Query: 278 caggtcgaccatcacgcccggcacggtgctgatcctgctcgctgggaggtacatggggaa 337 ||||||| |||||||||| || || ||||||||||||||||| ||||||| ||||||||| Sbjct: 121368 caggtcgtccatcacgcctgggacagtgctgatcctgctcgccgggaggttcatggggaa 121309 Query: 338 gcgcgtggtgttcctcaagcagctcaagtctggcctgctcctcatcac 385 |||||| |||||||||||||||||||| || |||||||| ||| |||| Sbjct: 121308 gcgcgtcgtgttcctcaagcagctcaaatccggcctgcttctcgtcac 121261 Score = 113 bits (57), Expect = 1e-21 Identities = 126/149 (84%) Strand = Plus / Minus Query: 568 aggcaaccaagaacctgcctgacttcaaaaaggatgaccagaaggccattgatgctgagt 627 ||||||||||||||||||| || ||||||||||| |||||||| | | ||||| |||| Sbjct: 119940 aggcaaccaagaacctgccggagttcaaaaaggaggaccagaaagttgtggatgccgagt 119881 Query: 628 tgatcaaggctatcgatgctgtccctgaccttaagaactatcttggtgcccggttctctc 687 ||||||| ||||| || |||||||| || || || | || |||||||| ||||| |||| Sbjct: 119880 tgatcaaagctattgaagctgtcccggatctgaaaacttaccttggtgcgcggttttctc 119821 Query: 688 tcagggacggtgacaagccccatgagatg 716 |||||||||| ||||||||||| |||||| Sbjct: 119820 tcagggacggcgacaagccccacgagatg 119792
>emb|X69378.1|MCYL16 M.crystallinum mRNA for ribosomal protein YL16 Length = 1015 Score = 103 bits (52), Expect = 1e-18 Identities = 106/124 (85%) Strand = Plus / Plus Query: 382 tcactggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtca 441 ||||||| ||||| ||| ||||||||||||| | | || |||||||| || ||||| | Sbjct: 418 tcactggtccttttaaggtcaatggtgtccctctgaggcgtgtgaaccaagcctatgtta 477 Query: 442 ttgccacatccacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagt 501 ||||||| || || ||||||||||| |||||||| || |||||||||||||||||||||| Sbjct: 478 ttgccacctcaaccaaggttgacatttctggtgtcaatgtggagaagtttgatgacaagt 537 Query: 502 actt 505 |||| Sbjct: 538 actt 541 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Plus Query: 207 cccaagttctaccccgccgacgacgtcaag 236 |||||||||||||| |||||||| |||||| Sbjct: 243 cccaagttctaccctgccgacgatgtcaag 272 Score = 42.1 bits (21), Expect = 3.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 138 ctctgggccatcaaggccaagaacggcgg 166 |||||||||||||||||||| || ||||| Sbjct: 159 ctctgggccatcaaggccaaaaatggcgg 187
>dbj|AB167080.1| Curculigo latifolia NAS-2 mRNA for neoculin acid subunit, complete cds Length = 655 Score = 81.8 bits (41), Expect = 4e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 257 caagcccaaacctaccaagctcaggtcgaccatcacgcccggcacggtgctgatcctgct 316 ||||||||| || |||||||||||| ||| ||| || || || |||||||||||||| || Sbjct: 105 caagcccaagcccaccaagctcaggccgagcattactccggggacggtgctgatccttct 46 Query: 317 cgctgggaggtacatggggaagcgcgtggtgttcctcaagcagct 361 ||| ||||||| |||||||||| | || || ||||| |||||||| Sbjct: 45 cgccgggaggttcatggggaagagggtcgttttcctgaagcagct 1
>emb|CT986496.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 509 Score = 77.8 bits (39), Expect = 6e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 420 cgggtgaaccaggcttatgtcattgccacatccacaaaggttgacatctctggtgttaag 479 |||||||| ||| |||||||||| || || ||||||||||| || | ||||| ||||| Sbjct: 73 cgggtgaatcagtcttatgtcatcgcgacctccacaaaggtcgatgtgtctggagttaat 132 Query: 480 gtggagaagtttgatgacaagtactttgcta 510 || ||||||||||||||||| |||||||||| Sbjct: 133 gttgagaagtttgatgacaaatactttgcta 163
>gb|DQ226579.1| Boechera divaricarpa isolate SLW-2-D10 mRNA sequence Length = 693 Score = 73.8 bits (37), Expect = 1e-09 Identities = 100/121 (82%) Strand = Plus / Minus Query: 387 ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 446 ||||| ||||||||||||||||| ||| | | || || |||||||| ||||| |||| Sbjct: 429 ggaccattcaagatcaatggtgttccattgagacgtgttaaccaggcctatgtgattgga 370 Query: 447 acatccacaaaggttgacatctctggtgttaaggtggagaagtttgatgacaagtacttt 506 || ||||||||||||||||||||||| || || | ||||| || ||||||||||| ||| Sbjct: 369 acttccacaaaggttgacatctctggagtcaacattgagaaattcgatgacaagtatttt 310 Query: 507 g 507 | Sbjct: 309 g 309
>ref|NM_106066.3| Arabidopsis thaliana structural constituent of ribosome (AT1G74060) mRNA, complete cds Length = 967 Score = 67.9 bits (34), Expect = 6e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 384 actggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcatt 443 |||||||| ||||||||||||||||| || | | || || |||||||| ||||||||| Sbjct: 429 actggaccattcaagatcaatggtgttcctctgagacgtgttaaccaggcctatgtcatt 488 Query: 444 gccacatccacaaaggttgacatctctggtgtta 477 | || ||||||||||||||||| ||||| |||| Sbjct: 489 ggtacttccacaaaggttgacatttctggagtta 522
>gb|AY062622.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (F2P9.7) mRNA, complete cds Length = 942 Score = 67.9 bits (34), Expect = 6e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 384 actggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcatt 443 |||||||| ||||||||||||||||| || | | || || |||||||| ||||||||| Sbjct: 424 actggaccattcaagatcaatggtgttcctctgagacgtgttaaccaggcctatgtcatt 483 Query: 444 gccacatccacaaaggttgacatctctggtgtta 477 | || ||||||||||||||||| ||||| |||| Sbjct: 484 ggtacttccacaaaggttgacatttctggagtta 517
>gb|BT002588.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (At1g74060) mRNA, complete cds Length = 789 Score = 67.9 bits (34), Expect = 6e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 384 actggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcatt 443 |||||||| ||||||||||||||||| || | | || || |||||||| ||||||||| Sbjct: 361 actggaccattcaagatcaatggtgttcctctgagacgtgttaaccaggcctatgtcatt 420 Query: 444 gccacatccacaaaggttgacatctctggtgtta 477 | || ||||||||||||||||| ||||| |||| Sbjct: 421 ggtacttccacaaaggttgacatttctggagtta 454
>emb|BX814470.1|CNS0ADLC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 942 Score = 67.9 bits (34), Expect = 6e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 384 actggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcatt 443 |||||||| ||||||||||||||||| || | | || || |||||||| ||||||||| Sbjct: 421 actggaccattcaagatcaatggtgttcctctgagacgtgttaaccaggcctatgtcatt 480 Query: 444 gccacatccacaaaggttgacatctctggtgtta 477 | || ||||||||||||||||| ||||| |||| Sbjct: 481 ggtacttccacaaaggttgacatttctggagtta 514
>ref|NM_106064.2| Arabidopsis thaliana structural constituent of ribosome (AT1G74050) mRNA, complete cds Length = 1035 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 384 actggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcatt 443 |||||||| ||||||||||||||||| || | | || || |||||||| ||||| ||| Sbjct: 487 actggaccattcaagatcaatggtgttcctttgagacgtgttaaccaggcctatgtgatt 546 Query: 444 gccacatccacaaaggttgacatctctgg 472 | ||| ||||||||||||||||| ||||| Sbjct: 547 ggcacttccacaaaggttgacatttctgg 575
>ref|XM_571207.1| Cryptococcus neoformans var. neoformans JEC21 structural constituent of ribosome (CNE03060) partial mRNA Length = 764 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 395 caagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgccacatccac 454 |||| |||| |||||||| |||| || |||| |||||| |||||||||||||| ||||| Sbjct: 400 caagctcaacggtgtccctcttcgtcgagtgagccaggcctatgtcattgccacttccac 459 Query: 455 aaaggttgacatctctggtgt 475 ||||| |||||||| ||||| Sbjct: 460 caaggtcgacatctccggtgt 480
>gb|AY114641.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (At1g74050) mRNA, complete cds Length = 891 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 384 actggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcatt 443 |||||||| ||||||||||||||||| || | | || || |||||||| ||||| ||| Sbjct: 361 actggaccattcaagatcaatggtgttcctttgagacgtgttaaccaggcctatgtgatt 420 Query: 444 gccacatccacaaaggttgacatctctgg 472 | ||| ||||||||||||||||| ||||| Sbjct: 421 ggcacttccacaaaggttgacatttctgg 449
>gb|AY081305.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (At1g74050) mRNA, complete cds Length = 960 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 384 actggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcatt 443 |||||||| ||||||||||||||||| || | | || || |||||||| ||||| ||| Sbjct: 413 actggaccattcaagatcaatggtgttcctttgagacgtgttaaccaggcctatgtgatt 472 Query: 444 gccacatccacaaaggttgacatctctgg 472 | ||| ||||||||||||||||| ||||| Sbjct: 473 ggcacttccacaaaggttgacatttctgg 501
>gb|AY054573.1| Arabidopsis thaliana putative 60S ribosomal protein L6 (At1g74050; F2P9.8) mRNA, complete cds Length = 892 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 384 actggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcatt 443 |||||||| ||||||||||||||||| || | | || || |||||||| ||||| ||| Sbjct: 417 actggaccattcaagatcaatggtgttcctttgagacgtgttaaccaggcctatgtgatt 476 Query: 444 gccacatccacaaaggttgacatctctgg 472 | ||| ||||||||||||||||| ||||| Sbjct: 477 ggcacttccacaaaggttgacatttctgg 505
>gb|AY087325.1| Arabidopsis thaliana clone 3418 mRNA, complete sequence Length = 985 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 384 actggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcatt 443 |||||||| ||||||||||||||||| || | | || || |||||||| ||||| ||| Sbjct: 487 actggaccattcaagatcaatggtgttcctttgagacgtgttaaccaggcctatgtgatt 546 Query: 444 gccacatccacaaaggttgacatctctgg 472 | ||| ||||||||||||||||| ||||| Sbjct: 547 ggcacttccacaaaggttgacatttctgg 575
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 63.9 bits (32), Expect = 1e-06 Identities = 65/76 (85%) Strand = Plus / Plus Query: 400 tcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgccacatccacaaagg 459 |||| |||||||| |||| || |||| |||||| |||||||||||||| ||||| |||| Sbjct: 868777 tcaacggtgtccctcttcgtcgagtgagccaggcctatgtcattgccacttccaccaagg 868836 Query: 460 ttgacatctctggtgt 475 | |||||||| ||||| Sbjct: 868837 tcgacatctccggtgt 868852
>gb|AC016662.7|AC016662 Arabidopsis thaliana chromosome 1 BAC F2P9 genomic sequence, complete sequence Length = 108387 Score = 61.9 bits (31), Expect = 4e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 387 ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 446 ||||| ||||||||||||||||| || | | || || |||||||| |||||||||| Sbjct: 22667 ggaccattcaagatcaatggtgttcctctgagacgtgttaaccaggcctatgtcattggt 22726 Query: 447 acatccacaaaggttgacatctctggtgtta 477 || ||||||||||||||||| ||||| |||| Sbjct: 22727 acttccacaaaggttgacatttctggagtta 22757 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 387 ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 446 ||||| ||||||||||||||||| || | | || || |||||||| ||||| |||| | Sbjct: 25405 ggaccattcaagatcaatggtgttcctttgagacgtgttaaccaggcctatgtgattggc 25464 Query: 447 acatccacaaaggttgacatctctgg 472 || ||||||||||||||||| ||||| Sbjct: 25465 acttccacaaaggttgacatttctgg 25490
>emb|BX814105.1|CNS0ADRY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZF05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 440 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 426 aaccaggcttatgtcattgccacatccacaaaggttgacatctctggtgtta 477 |||||||| ||||| |||| ||| ||||||||||||||||| ||||| |||| Sbjct: 12 aaccaggcctatgtgattggcacttccacaaaggttgacatttctggagtta 63
>gb|AC189400.1| Brassica rapa subsp. pekinensis clone KBrB056L15, complete sequence Length = 117834 Score = 54.0 bits (27), Expect = 0.001 Identities = 75/91 (82%) Strand = Plus / Minus Query: 387 ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 446 ||||| ||||||||||||||||| || | | || || |||||| ||||||| || | | Sbjct: 61821 ggaccgttcaagatcaatggtgttcctttgagacgtgttaaccagtcttatgtgatcggc 61762 Query: 447 acatccacaaaggttgacatctctggtgtta 477 || ||||| ||||||||||||||||| |||| Sbjct: 61761 acgtccactaaggttgacatctctggagtta 61731
>gb|DQ214771.1| Taeniopygia guttata clone 0061P0023H09 ribosomal protein L6 internal polyA variant-like mRNA, complete sequence Length = 950 Score = 48.1 bits (24), Expect = 0.057 Identities = 30/32 (93%) Strand = Plus / Plus Query: 286 ccatcacgcccggcacggtgctgatcctgctc 317 ||||||| |||||||||||||| ||||||||| Sbjct: 462 ccatcacccccggcacggtgctcatcctgctc 493
>gb|DQ214770.1| Taeniopygia guttata clone 0061P0025H04 ribosomal protein L6 internal polyA variant-like mRNA, complete sequence Length = 959 Score = 48.1 bits (24), Expect = 0.057 Identities = 30/32 (93%) Strand = Plus / Plus Query: 286 ccatcacgcccggcacggtgctgatcctgctc 317 ||||||| |||||||||||||| ||||||||| Sbjct: 472 ccatcacccccggcacggtgctcatcctgctc 503
>gb|AC155898.15| Medicago truncatula clone mth2-109f1, complete sequence Length = 93173 Score = 48.1 bits (24), Expect = 0.057 Identities = 69/84 (82%) Strand = Plus / Plus Query: 423 gtgaaccaggcttatgtcattgccacatccacaaaggttgacatctctggtgttaaggtg 482 ||||| ||||| ||||| |||| ||||| || || || || ||||| |||||||| ||| Sbjct: 403 gtgaatcaggcctatgtgattggtacatcaaccaaagtcgatatctccggtgttaatgtg 462 Query: 483 gagaagtttgatgacaagtacttt 506 || || ||||||||||||||||| Sbjct: 463 gataaccttgatgacaagtacttt 486
>dbj|AB035569.1| Chara globularis cgrpl6 mRNA for 60S ribosomal protein L6 CgRPL6, partial cds Length = 609 Score = 48.1 bits (24), Expect = 0.057 Identities = 30/32 (93%) Strand = Plus / Plus Query: 336 aagcgcgtggtgttcctcaagcagctcaagtc 367 ||||||||||| ||||||||||||||| |||| Sbjct: 193 aagcgcgtggtattcctcaagcagctcgagtc 224
>gb|BT027426.1| Gasterosteus aculeatus clone CFW274-A04 mRNA sequence Length = 865 Score = 46.1 bits (23), Expect = 0.22 Identities = 26/27 (96%) Strand = Plus / Plus Query: 336 aagcgcgtggtgttcctcaagcagctc 362 ||||||||||||||||| ||||||||| Sbjct: 408 aagcgcgtggtgttcctgaagcagctc 434
>emb|BX065431.1|CNS09MNF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC49BC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 889 Score = 46.1 bits (23), Expect = 0.22 Identities = 26/27 (96%) Strand = Plus / Minus Query: 293 gcccggcacggtgctgatcctgctcgc 319 |||||||| |||||||||||||||||| Sbjct: 531 gcccggcaaggtgctgatcctgctcgc 505
>emb|BX065430.1|CNS09MNE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC49BC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1024 Score = 46.1 bits (23), Expect = 0.22 Identities = 26/27 (96%) Strand = Plus / Plus Query: 293 gcccggcacggtgctgatcctgctcgc 319 |||||||| |||||||||||||||||| Sbjct: 414 gcccggcaaggtgctgatcctgctcgc 440
>emb|BX062222.1|CNS09K6A Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC43BF05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 932 Score = 46.1 bits (23), Expect = 0.22 Identities = 26/27 (96%) Strand = Plus / Plus Query: 293 gcccggcacggtgctgatcctgctcgc 319 |||||||| |||||||||||||||||| Sbjct: 352 gcccggcaaggtgctgatcctgctcgc 378
>emb|BX057445.1|CNS09GHL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC37BF06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 505 Score = 46.1 bits (23), Expect = 0.22 Identities = 26/27 (96%) Strand = Plus / Plus Query: 293 gcccggcacggtgctgatcctgctcgc 319 |||||||| |||||||||||||||||| Sbjct: 404 gcccggcaaggtgctgatcctgctcgc 430
>emb|BX048593.1|CNS099NP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC23DD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 815 Score = 46.1 bits (23), Expect = 0.22 Identities = 26/27 (96%) Strand = Plus / Minus Query: 293 gcccggcacggtgctgatcctgctcgc 319 |||||||| |||||||||||||||||| Sbjct: 624 gcccggcaaggtgctgatcctgctcgc 598
>emb|BX048592.1|CNS099NO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC23DD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 867 Score = 46.1 bits (23), Expect = 0.22 Identities = 26/27 (96%) Strand = Plus / Plus Query: 293 gcccggcacggtgctgatcctgctcgc 319 |||||||| |||||||||||||||||| Sbjct: 408 gcccggcaaggtgctgatcctgctcgc 434
>emb|BX047227.1|CNS098LR Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC21BC05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 524 Score = 46.1 bits (23), Expect = 0.22 Identities = 26/27 (96%) Strand = Plus / Minus Query: 293 gcccggcacggtgctgatcctgctcgc 319 |||||||| |||||||||||||||||| Sbjct: 416 gcccggcaaggtgctgatcctgctcgc 390
>emb|BX047226.1|CNS098LQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC21BC05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 904 Score = 46.1 bits (23), Expect = 0.22 Identities = 26/27 (96%) Strand = Plus / Plus Query: 293 gcccggcacggtgctgatcctgctcgc 319 |||||||| |||||||||||||||||| Sbjct: 411 gcccggcaaggtgctgatcctgctcgc 437
>emb|BX042740.1|CNS09554 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC14DF07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 811 Score = 46.1 bits (23), Expect = 0.22 Identities = 26/27 (96%) Strand = Plus / Plus Query: 293 gcccggcacggtgctgatcctgctcgc 319 |||||||| |||||||||||||||||| Sbjct: 416 gcccggcaaggtgctgatcctgctcgc 442
>emb|BX284672.11| Zebrafish DNA sequence from clone DKEY-88N24 in linkage group 20 Contains give genes for novel proteins with Lectin C-type domains, the gene for a novel protein similar to vertebrate NDRG (N-myc downregulated gene family) member 2 (NDGR2), two novel genes and two CpG islands, complete sequence Length = 149982 Score = 46.1 bits (23), Expect = 0.22 Identities = 26/27 (96%) Strand = Plus / Minus Query: 841 tgcttttgcaggttttctttgcgtttg 867 ||||||||||||||||||||| ||||| Sbjct: 78852 tgcttttgcaggttttctttgggtttg 78826
>ref|XM_321154.2| Anopheles gambiae str. PEST ENSANGP00000020813 (ENSANGG00000018324), partial mRNA Length = 946 Score = 46.1 bits (23), Expect = 0.22 Identities = 26/27 (96%) Strand = Plus / Plus Query: 293 gcccggcacggtgctgatcctgctcgc 319 |||||||| |||||||||||||||||| Sbjct: 336 gcccggcaaggtgctgatcctgctcgc 362
>gb|DQ244628.1| Zea mays clone 9716 mRNA sequence Length = 875 Score = 44.1 bits (22), Expect = 0.89 Identities = 25/26 (96%) Strand = Plus / Plus Query: 141 tgggccatcaaggccaagaacggcgg 166 ||||| |||||||||||||||||||| Sbjct: 151 tgggcaatcaaggccaagaacggcgg 176
>ref|XM_001066007.1| PREDICTED: Rattus norvegicus myosin, heavy polypeptide 7B, cardiac muscle, beta (predicted) (Myh7b_predicted), mRNA Length = 6138 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 188 gccagccgccgtcgccgagccc 209 |||||||||||||||||||||| Sbjct: 53 gccagccgccgtcgccgagccc 74
>gb|DQ384529.1| Panax ginseng clone PG6L-6 unknown mRNA Length = 624 Score = 44.1 bits (22), Expect = 0.89 Identities = 28/30 (93%) Strand = Plus / Plus Query: 207 cccaagttctaccccgccgacgacgtcaag 236 |||||||||||||| || |||||||||||| Sbjct: 259 cccaagttctacccagctgacgacgtcaag 288
>gb|AC136840.24| Medicago truncatula clone mth2-33n3, complete sequence Length = 106528 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 844 ttttgcaggttttctttgcgtt 865 |||||||||||||||||||||| Sbjct: 99359 ttttgcaggttttctttgcgtt 99380
>gb|AC144728.11| Medicago truncatula clone mth2-6g7, complete sequence Length = 105161 Score = 44.1 bits (22), Expect = 0.89 Identities = 22/22 (100%) Strand = Plus / Plus Query: 844 ttttgcaggttttctttgcgtt 865 |||||||||||||||||||||| Sbjct: 52991 ttttgcaggttttctttgcgtt 53012
>gb|AY088336.1| Arabidopsis thaliana clone 573 mRNA, complete sequence Length = 832 Score = 44.1 bits (22), Expect = 0.89 Identities = 70/86 (81%) Strand = Plus / Plus Query: 387 ggacctttcaagatcaatggtgtcccagttcgccgggtgaaccaggcttatgtcattgcc 446 ||||| |||||||| |||||||| ||| | | || || ||||| || ||||| |||| Sbjct: 392 ggaccattcaagattaatggtgttccattgagacgtgttaaccaagcctatgtgattgga 451 Query: 447 acatccacaaaggttgacatctctgg 472 || ||||||||||||||||| ||||| Sbjct: 452 acctccacaaaggttgacatttctgg 477
>emb|AJ276271.1|CAR276271 Cicer arietinum mRNA for putative 60S ribosomal protein L6 (ORF1) Length = 905 Score = 44.1 bits (22), Expect = 0.89 Identities = 34/38 (89%) Strand = Plus / Plus Query: 138 ctctgggccatcaaggccaagaacggcggagccttccc 175 |||||||||||||||||||| ||||||| || ||||| Sbjct: 121 ctctgggccatcaaggccaaacacggcggcgctttccc 158
>gb|AC184062.2| Populus trichocarpa clone Pop1-107J2, complete sequence Length = 90108 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 475 ttaaggtggagaagtttgatg 495 ||||||||||||||||||||| Sbjct: 78413 ttaaggtggagaagtttgatg 78393
>ref|NM_001041665.1| Encephalitozoon cuniculi GB-M1 hypothetical protein (ECU07_1140) partial mRNA Length = 1113 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 agaaggccagggcaaagaaga 537 ||||||||||||||||||||| Sbjct: 654 agaaggccagggcaaagaaga 674
>ref|XM_363819.1| Magnaporthe grisea 70-15 hypothetical protein (MG01745.4) partial mRNA Length = 1389 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 gatgacaagtactttgctagg 512 ||||||||||||||||||||| Sbjct: 778 gatgacaagtactttgctagg 798
>gb|AY674237.1| Ixodes pacificus clone IP_7_60_92_78_CLU ribosomal protein L6 mRNA, complete cds Length = 807 Score = 42.1 bits (21), Expect = 3.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 336 aagcgcgtggtgttcctcaagcagctcaagtctggcctgct 376 ||||| ||||||||||| |||||||| ||| | |||||||| Sbjct: 406 aagcgtgtggtgttcctgaagcagctgaagacgggcctgct 446
>gb|AC166939.2| Mus musculus BAC clone RP23-72K19 from chromosome 8, complete sequence Length = 236510 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 842 gcttttgcaggttttctttgc 862 ||||||||||||||||||||| Sbjct: 146563 gcttttgcaggttttctttgc 146583
>gb|AC122890.4| Mus musculus BAC clone RP23-63O14 from 8, complete sequence Length = 209359 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 842 gcttttgcaggttttctttgc 862 ||||||||||||||||||||| Sbjct: 8956 gcttttgcaggttttctttgc 8976
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 ccgccgcctcctcccttcttc 27 ||||||||||||||||||||| Sbjct: 14790114 ccgccgcctcctcccttcttc 14790094
>emb|BX649433.4| Zebrafish DNA sequence from clone DKEY-215P16 in linkage group 7, complete sequence Length = 77241 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 653 tgaccttaagaactatcttgg 673 ||||||||||||||||||||| Sbjct: 51258 tgaccttaagaactatcttgg 51238
>dbj|AB109375.1| Tribolodon hakonensis GDH mRNA for glutamate dehydrogenase, complete cds Length = 3540 Score = 42.1 bits (21), Expect = 3.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 333 gggaagcgcgtggtgttcctcaagcagct 361 |||||||| ||||| |||||||||||||| Sbjct: 3109 gggaagcgtgtggtcttcctcaagcagct 3081
>emb|AL928677.6| Zebrafish DNA sequence from clone BUSM1-70B1 in linkage group 7 Contains a novel gene similar to mouse and rodent CHRNA7 (cholinergic receptor, nicotinic, alpha polypeptide 7), a novel gene and two CpG islands, complete sequence Length = 144076 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 tgaccttaagaactatcttgg 673 ||||||||||||||||||||| Sbjct: 62843 tgaccttaagaactatcttgg 62863
>emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 226576 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 agaaggccagggcaaagaaga 537 ||||||||||||||||||||| Sbjct: 139383 agaaggccagggcaaagaaga 139403
>dbj|AP003021.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503E05 Length = 168258 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 ccgccgcctcctcccttcttc 27 ||||||||||||||||||||| Sbjct: 26158 ccgccgcctcctcccttcttc 26138
>dbj|AP002754.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-855O10, complete sequence Length = 185766 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 cttcccaaaggccgagaagcc 190 ||||||||||||||||||||| Sbjct: 152757 cttcccaaaggccgagaagcc 152737
>dbj|AP002380.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-467L20, complete sequence Length = 188788 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 cttcccaaaggccgagaagcc 190 ||||||||||||||||||||| Sbjct: 49844 cttcccaaaggccgagaagcc 49824
>emb|AL929433.10| Mouse DNA sequence from clone RP23-193M23 on chromosome 4, complete sequence Length = 198426 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 366 tctggcctgctcctcatcact 386 ||||||||||||||||||||| Sbjct: 165257 tctggcctgctcctcatcact 165237
>gb|AC004770.1|AC004770 Homo sapiens chromosome 11, BAC CIT-HSP-311e8 (BC269730) containing the hFEN1 gene, complete sequence Length = 185035 Score = 42.1 bits (21), Expect = 3.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 cttcccaaaggccgagaagcc 190 ||||||||||||||||||||| Sbjct: 151474 cttcccaaaggccgagaagcc 151494
>gb|AY823671.1| Glycine max HDZip I protein mRNA, complete cds Length = 1747 Score = 42.1 bits (21), Expect = 3.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 139 tctgggccatcaaggccaagaacgg 163 ||||||||||||||||||| ||||| Sbjct: 95 tctgggccatcaaggccaaaaacgg 71 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 155,979,134 Number of extensions: 8319379 Number of successful extensions: 189609 Number of sequences better than 10.0: 73 Number of HSP's gapped: 189585 Number of HSP's successfully gapped: 109 Length of query: 929 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 906 Effective length of database: 18,503,978,556 Effective search space: 16764604571736 Effective search space used: 16764604571736 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)