ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf180j13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK243255.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100048F19, full insert sequence Length = 1440 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 383 ttgtttctggtatatcgaagtggtatatgcaga 415 ||||| |||||||||| |||||||||||||||| Sbjct: 1395 ttgttcctggtatatcaaagtggtatatgcaga 1427
>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete sequence Length = 112897 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 383 ttgtttctggtatatcgaagtggtatatgcaga 415 ||||| |||||||||| |||||||||||||||| Sbjct: 21134 ttgttcctggtatatcaaagtggtatatgcaga 21102
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 383 ttgtttctggtatatcgaagtggtatatgcaga 415 ||||| |||||||||| |||||||||||||||| Sbjct: 35066393 ttgttcctggtatatcaaagtggtatatgcaga 35066361
>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12, complete sequence Length = 144670 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 383 ttgtttctggtatatcgaagtggtatatgcaga 415 ||||| |||||||||| |||||||||||||||| Sbjct: 2896 ttgttcctggtatatcaaagtggtatatgcaga 2864
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 383 ttgtttctggtatatcgaagtggtatatgcaga 415 ||||| |||||||||| |||||||||||||||| Sbjct: 125440 ttgttcctggtatatcaaagtggtatatgcaga 125408
>gb|AY998670.1| Heroina isonycterina isolate 1157 cytochrome b gene, partial cds; mitochondrial Length = 1116 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 404 ggtatatgcagatgaagaaaaag 426 ||||||||||||||||||||||| Sbjct: 265 ggtatatgcagatgaagaaaaag 243
>gb|AC024706.6| Homo sapiens BAC clone RP11-119J20 from 4, complete sequence Length = 169557 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 282 tctgtttttatttcttttccttt 304 ||||||||||||||||||||||| Sbjct: 131604 tctgtttttatttcttttccttt 131626
>gb|AC190114.4| Canis Familiaris chromosome 2, clone XX-440P16, complete sequence Length = 182388 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 286 tttttatttcttttcctttgtt 307 |||||||||||||||||||||| Sbjct: 68640 tttttatttcttttcctttgtt 68661
>gb|AC187001.7| Canis Familiaris chromosome 2, clone XX-425F13, complete sequence Length = 181819 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 286 tttttatttcttttcctttgtt 307 |||||||||||||||||||||| Sbjct: 149225 tttttatttcttttcctttgtt 149246
>gb|AC186064.6| Canis Familiaris chromosome 2, clone XX-149D17, complete sequence Length = 198843 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 286 tttttatttcttttcctttgtt 307 |||||||||||||||||||||| Sbjct: 3720 tttttatttcttttcctttgtt 3741
>gb|AC123832.4| Mus musculus BAC clone RP24-126O19 from chromosome 9, complete sequence Length = 181337 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 248 ccagacagacccatccctcctt 269 |||||||||||||||||||||| Sbjct: 113460 ccagacagacccatccctcctt 113481
>emb|AL121747.41|HSDJ852M4 Human DNA sequence from clone RP5-852M4 on chromosome 20 Contains the C20orf18 gene for the possible ortholog of rodent ubiquitin conjugating enzyme 7 interacting protein 3 (UBCE7IP3), the C20orf140 gene for a novel protein similar to Drosophilia CG17883, a novel gene and two CpG islands, complete sequence Length = 58627 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 tgtgaagctgtgctagtgctgt 239 |||||||||||||||||||||| Sbjct: 34835 tgtgaagctgtgctagtgctgt 34814
>emb|AL645934.7| Mouse DNA sequence from clone RP23-27P11 on chromosome 11, complete sequence Length = 225839 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 283 ctgtttttatttcttttcctttgttt 308 |||||||| ||||||||||||||||| Sbjct: 155838 ctgtttttttttcttttcctttgttt 155863
>gb|AC018685.12| Homo sapiens BAC clone RP11-455M16 from 2, complete sequence Length = 173381 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 aagggaagagaagagaggagcg 106 |||||||||||||||||||||| Sbjct: 16097 aagggaagagaagagaggagcg 16076
>gb|AF018596.1|AF018596 Centropomus mexicanus cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 306 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 404 ggtatatgcagatgaagaaaaa 425 |||||||||||||||||||||| Sbjct: 190 ggtatatgcagatgaagaaaaa 169
>gb|AF018595.1|AF018595 Centropomus mexicanus cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 306 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 404 ggtatatgcagatgaagaaaaa 425 |||||||||||||||||||||| Sbjct: 190 ggtatatgcagatgaagaaaaa 169
>gb|AF018594.1|AF018594 Centropomus parallelus cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 308 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 404 ggtatatgcagatgaagaaaaa 425 |||||||||||||||||||||| Sbjct: 192 ggtatatgcagatgaagaaaaa 171
>gb|AF018572.1|AF018572 Centropomus pectinatus cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 306 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 404 ggtatatgcagatgaagaaaaa 425 |||||||||||||||||||||| Sbjct: 190 ggtatatgcagatgaagaaaaa 169
>gb|AF018571.1|AF018571 Centropomus pectinatus cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 306 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 404 ggtatatgcagatgaagaaaaa 425 |||||||||||||||||||||| Sbjct: 190 ggtatatgcagatgaagaaaaa 169
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 ccctcctctgtttttatttcttttc 300 |||| |||||||||||||||||||| Sbjct: 21828253 ccctgctctgtttttatttcttttc 21828229
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 tttatttcttttcctttgttt 308 ||||||||||||||||||||| Sbjct: 3444529 tttatttcttttcctttgttt 3444509
>ref|NM_118809.3| Arabidopsis thaliana unknown protein (AT4G26750) mRNA, complete cds Length = 1535 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 ggaggaggaggagcagaggacaagc 58 |||||||||||||||||||| |||| Sbjct: 1140 ggaggaggaggagcagaggagaagc 1116
>gb|AC151782.1| Ornithorhynchus anatinus chromosome UNK clone OABb-208A1, complete sequence Length = 145600 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 gggaggaggaggagcagagga 53 ||||||||||||||||||||| Sbjct: 37684 gggaggaggaggagcagagga 37704
>gb|AC124976.9| Mus musculus chromosome 3, clone RP24-84E6, complete sequence Length = 218027 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 ctctgtttttatttcttttcctttg 305 |||||| |||||||||||||||||| Sbjct: 93468 ctctgtctttatttcttttcctttg 93492
>gb|AF301594.1| Triatoma dimidiata mitochondrial DNA, complete genome Length = 17019 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 284 tgtttttatttcttttcctttgttt 308 ||||||| ||||||||||||||||| Sbjct: 12159 tgtttttttttcttttcctttgttt 12135
>gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's Hospital Oakland Research Institute) complete sequence Length = 227955 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 161 tttcttctttctttgtggttttgtt 185 |||||||||||||||| |||||||| Sbjct: 170043 tttcttctttctttgttgttttgtt 170067
>gb|AC006467.13| Drosophila melanogaster clone BACR03L08, complete sequence Length = 170327 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 ccctcctctgtttttatttcttttc 300 |||| |||||||||||||||||||| Sbjct: 71080 ccctgctctgtttttatttcttttc 71056
>gb|AC150553.1| Drosophila melanogaster clone BACR09H20, complete sequence Length = 179099 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 ccctcctctgtttttatttcttttc 300 |||| |||||||||||||||||||| Sbjct: 118955 ccctgctctgtttttatttcttttc 118931
>gb|AC099863.14| Mus musculus chromosome 3, clone RP23-6F2, complete sequence Length = 245784 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 tggaaccctcctctgttttta 291 ||||||||||||||||||||| Sbjct: 227145 tggaaccctcctctgttttta 227165
>gb|AC146118.3| Pan troglodytes BAC clone RP43-23A6 from 7, complete sequence Length = 166241 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 aagggaagagaagagaggagc 105 ||||||||||||||||||||| Sbjct: 90942 aagggaagagaagagaggagc 90962
>gb|AC122239.4| Mus musculus BAC clone RP23-143K14 from chromosome 8, complete sequence Length = 197109 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 ttctttctttgtggttttgtt 185 ||||||||||||||||||||| Sbjct: 115899 ttctttctttgtggttttgtt 115879
>gb|AC122002.2| Mus musculus BAC clone RP24-335H15 from 7, complete sequence Length = 114070 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 cttctttctttgtggttttgt 184 ||||||||||||||||||||| Sbjct: 847 cttctttctttgtggttttgt 827
>gb|AC115750.9| Mus musculus chromosome 10, clone RP23-16F5, complete sequence Length = 228071 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 284 tgtttttatttcttttcctttgttt 308 |||||||||||| |||||||||||| Sbjct: 140108 tgtttttatttcctttcctttgttt 140084
>gb|AC153013.3| Mus musculus BAC clone RP23-273N8 from chromosome 8, complete sequence Length = 196609 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 ttctttctttgtggttttgtt 185 ||||||||||||||||||||| Sbjct: 18526 ttctttctttgtggttttgtt 18506
>gb|AY094009.1| Arabidopsis thaliana AT4g26750/F10M23_90 mRNA, complete cds Length = 1266 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 ggaggaggaggagcagaggacaagc 58 |||||||||||||||||||| |||| Sbjct: 1025 ggaggaggaggagcagaggagaagc 1001
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 gggaggaggaggagcagagga 53 ||||||||||||||||||||| Sbjct: 28515765 gggaggaggaggagcagagga 28515745
>emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome Length = 1144377 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 tcctctgtttttatttctttt 299 ||||||||||||||||||||| Sbjct: 1135040 tcctctgtttttatttctttt 1135060
>gb|AC134432.4| Mus musculus BAC clone RP24-389K11 from chromosome 8, complete sequence Length = 150334 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 284 tgtttttatttcttttcctttgttt 308 |||||||||||| |||||||||||| Sbjct: 53188 tgtttttatttcctttcctttgttt 53164
>ref|XM_648838.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (68.t00026) partial mRNA Length = 795 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 tgtttttatttcttttccttt 304 ||||||||||||||||||||| Sbjct: 354 tgtttttatttcttttccttt 334
>gb|AF380781.1|AF380781 Pseudoeurycea leprosa clone e33.36 cytochrome b (cytB) gene, partial cds; mitochondrial gene for mitochondrial product Length = 567 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 gtatatgcagatgaagaaaaa 425 ||||||||||||||||||||| Sbjct: 228 gtatatgcagatgaagaaaaa 208
>gb|AF380778.1|AF380778 Pseudoeurycea leprosa clone e33.45 cytochrome b (cytB) gene, partial cds; mitochondrial gene for mitochondrial product Length = 567 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 gtatatgcagatgaagaaaaa 425 ||||||||||||||||||||| Sbjct: 228 gtatatgcagatgaagaaaaa 208
>gb|AY048219.1| Arabidopsis thaliana AT4g26750/F10M23_90 mRNA, complete cds Length = 1474 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 ggaggaggaggagcagaggacaagc 58 |||||||||||||||||||| |||| Sbjct: 1080 ggaggaggaggagcagaggagaagc 1056
>emb|CR382400.1| Plasmodium falciparum chromosome 6, complete sequence; segment 3/5 Length = 348034 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 284 tgtttttatttcttttcctttgttt 308 |||||||||||||||| |||||||| Sbjct: 198364 tgtttttatttctttttctttgttt 198340
>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65 Length = 198320 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 ggaggaggaggagcagaggacaagc 58 |||||||||||||||||||| |||| Sbjct: 173264 ggaggaggaggagcagaggagaagc 173288
>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project) Length = 128574 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 ggaggaggaggagcagaggacaagc 58 |||||||||||||||||||| |||| Sbjct: 24101 ggaggaggaggagcagaggagaagc 24125
>dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034C09 Length = 170226 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 gggaggaggaggagcagagga 53 ||||||||||||||||||||| Sbjct: 42204 gggaggaggaggagcagagga 42184
>gb|AC011253.4|AC011253 Drosophila melanogaster, chromosome 3R, region 84D-84D, BAC clone BACR37K05, complete sequence Length = 197597 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 tttatttcttttcctttgttt 308 ||||||||||||||||||||| Sbjct: 124805 tttatttcttttcctttgttt 124785
>emb|BX826728.1|CNS0A3ZF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB58ZD12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1332 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 ggaggaggaggagcagaggacaagc 58 |||||||||||||||||||| |||| Sbjct: 1058 ggaggaggaggagcagaggagaagc 1034
>emb|BX826584.1|CNS0A453 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB43ZG12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1408 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 ggaggaggaggagcagaggacaagc 58 |||||||||||||||||||| |||| Sbjct: 1059 ggaggaggaggagcagaggagaagc 1035
>emb|BX826538.1|CNS0A410 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB36ZG06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1328 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 ggaggaggaggagcagaggacaagc 58 |||||||||||||||||||| |||| Sbjct: 1036 ggaggaggaggagcagaggagaagc 1012
>emb|BX826452.1|CNS0A3Z8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB27ZH05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1366 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 ggaggaggaggagcagaggacaagc 58 |||||||||||||||||||| |||| Sbjct: 1050 ggaggaggaggagcagaggagaagc 1026
>emb|BX828244.1|CNS0A3RZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1495 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 ggaggaggaggagcagaggacaagc 58 |||||||||||||||||||| |||| Sbjct: 1140 ggaggaggaggagcagaggagaagc 1116
>emb|BX828199.1|CNS0A3V4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZF04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1343 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 ggaggaggaggagcagaggacaagc 58 |||||||||||||||||||| |||| Sbjct: 1050 ggaggaggaggagcagaggagaagc 1026
>emb|BX827593.1|CNS0A3PC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS80ZA02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1409 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 ggaggaggaggagcagaggacaagc 58 |||||||||||||||||||| |||| Sbjct: 1050 ggaggaggaggagcagaggagaagc 1026
>emb|BX827333.1|CNS0A3PO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS40ZB09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1435 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 ggaggaggaggagcagaggacaagc 58 |||||||||||||||||||| |||| Sbjct: 1055 ggaggaggaggagcagaggagaagc 1031
>emb|BX828334.1|CNS0A2EG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH78ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1407 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 ggaggaggaggagcagaggacaagc 58 |||||||||||||||||||| |||| Sbjct: 1060 ggaggaggaggagcagaggagaagc 1036
>gb|DQ266374.1| Ixodes ricinus ricinusin mRNA, complete cds Length = 529 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 gatgaagaaaaagatgaattc 434 ||||||||||||||||||||| Sbjct: 333 gatgaagaaaaagatgaattc 353
>gb|AC109281.5| Mus musculus chromosome 3, clone RP24-66E21, complete sequence Length = 222162 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 tggaaccctcctctgttttta 291 ||||||||||||||||||||| Sbjct: 159261 tggaaccctcctctgttttta 159241
>gb|AC153929.3| Mus musculus 10 BAC RP24-364H18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173752 Score = 42.1 bits (21), Expect = 1.7 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 276 ccctcctctgtttttatttcttttccttt 304 ||||||||||||||| ||||||||||||| Sbjct: 114263 ccctcctctgttttt-tttcttttccttt 114290
>ref|XM_725186.1| Plasmodium yoelii yoelii str. 17XNL cell division cycle protein 48 (PY02401) partial mRNA Length = 2142 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 tatgcagatgaagaaaaagat 428 ||||||||||||||||||||| Sbjct: 493 tatgcagatgaagaaaaagat 513
>ref|XM_672255.1| Plasmodium berghei strain ANKA ATPase (PB000861.00.0), partial mRNA Length = 2073 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 tatgcagatgaagaaaaagat 428 ||||||||||||||||||||| Sbjct: 448 tatgcagatgaagaaaaagat 468
>gb|AC142104.4| Mus musculus BAC clone RP24-313C11 from 8, complete sequence Length = 157626 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 tgtttttatttcttttcctttgttt 308 |||||||||||| |||||||||||| Sbjct: 11822 tgtttttatttcctttcctttgttt 11846
>emb|AL845263.10| Mouse DNA sequence from clone RP23-337L20 on chromosome 2, complete sequence Length = 209967 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 254 agacccatccctccttctggaaccc 278 ||||||||| ||||||||||||||| Sbjct: 181336 agacccatctctccttctggaaccc 181312
>emb|AL669834.10| Mouse DNA sequence from clone RP23-114O4 on chromosome 4, complete sequence Length = 147248 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 28 gcagtgggaggaggaggagcagagg 52 |||| |||||||||||||||||||| Sbjct: 35221 gcagagggaggaggaggagcagagg 35197
>gb|AC090349.8| Homo sapiens chromosome 18, clone RP11-844N22, complete sequence Length = 132192 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 tgtttttatttcttttcctt 303 |||||||||||||||||||| Sbjct: 9657 tgtttttatttcttttcctt 9676
>emb|CT027552.11| Zebrafish DNA sequence from clone DKEY-7C22 in linkage group 23, complete sequence Length = 215184 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 tctgtttttatttcttttcc 301 |||||||||||||||||||| Sbjct: 195309 tctgtttttatttcttttcc 195290
>emb|CR735105.10| Zebrafish DNA sequence from clone DKEY-202E11 in linkage group 23, complete sequence Length = 82796 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 tgtttttatttcttttcctt 303 |||||||||||||||||||| Sbjct: 45108 tgtttttatttcttttcctt 45089
>ref|XM_001151807.1| PREDICTED: Pan troglodytes hypothetical protein LOC740967 (LOC740967), mRNA Length = 597 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 ctgggggtggttgggctgtgaagc 225 |||||||||| ||||||||||||| Sbjct: 502 ctgggggtgggtgggctgtgaagc 479
>gb|AC190267.1| Gallus gallus chromosome Z clone CH261-44B21, complete sequence Length = 162998 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 agacaagggaagagaagaga 100 |||||||||||||||||||| Sbjct: 116155 agacaagggaagagaagaga 116136
>gb|AC187520.3| Pan troglodytes BAC clone CH251-641K22 from chromosome 7, complete sequence Length = 189666 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 tttttatttcttttcctttg 305 |||||||||||||||||||| Sbjct: 40133 tttttatttcttttcctttg 40152
>ref|XM_001061937.1| PREDICTED: Rattus norvegicus similar to HCDI protein (predicted) (RGD1309307_predicted), mRNA Length = 1981 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 gacaagggaagagaagagag 101 |||||||||||||||||||| Sbjct: 1793 gacaagggaagagaagagag 1774
>ref|XM_341321.3| PREDICTED: Rattus norvegicus similar to HCDI protein (predicted) (RGD1309307_predicted), mRNA Length = 1981 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 gacaagggaagagaagagag 101 |||||||||||||||||||| Sbjct: 1793 gacaagggaagagaagagag 1774
>ref|XM_001099875.1| PREDICTED: Macaca mulatta AMMECR1 protein (AMMECR1), mRNA Length = 5408 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tgcagtgggaggaggaggag 46 |||||||||||||||||||| Sbjct: 108 tgcagtgggaggaggaggag 89
>gb|AC186760.1| Pongo pygmaeus abelii chromosome UNK clone CH276-22H12, complete sequence Length = 225183 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ggaggaggaggagcagagga 53 |||||||||||||||||||| Sbjct: 71113 ggaggaggaggagcagagga 71094
>ref|XM_969374.1| PREDICTED: Tribolium castaneum similar to IQ motif containing D (LOC663319), mRNA Length = 1407 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ggaggaggaggagcagagga 53 |||||||||||||||||||| Sbjct: 1059 ggaggaggaggagcagagga 1078
>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence Length = 199737 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agtgggaggaggaggagcag 49 |||||||||||||||||||| Sbjct: 179384 agtgggaggaggaggagcag 179365
>gb|AC164094.5| Mus musculus BAC clone RP23-133F10 from chromosome 6, complete sequence Length = 216271 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ggaggaggaggagcagagga 53 |||||||||||||||||||| Sbjct: 214899 ggaggaggaggagcagagga 214918
>gb|AC126540.3| Ciona savignyi, clone XX-4791757C3, complete sequence Length = 39109 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ggaggaggaggagcagagga 53 |||||||||||||||||||| Sbjct: 26153 ggaggaggaggagcagagga 26172
>gb|AC130812.2| Ciona savignyi, clone XX-4785757L22, complete sequence Length = 40437 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ggaggaggaggagcagagga 53 |||||||||||||||||||| Sbjct: 25031 ggaggaggaggagcagagga 25012
>gb|AF288738.1| Homo sapiens epidermal growth factor receptor (EGFR) gene, complete cds, alternatively spliced; and 5S ribosomal RNA gene, complete sequence Length = 197496 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tgcagtgggaggaggaggag 46 |||||||||||||||||||| Sbjct: 39709 tgcagtgggaggaggaggag 39690
>gb|AC161505.4| Mus musculus chromosome 8, clone RP24-307K17, complete sequence Length = 215514 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 aagggaagagaagagaggag 104 |||||||||||||||||||| Sbjct: 146912 aagggaagagaagagaggag 146893
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tgcagtgggaggaggaggag 46 |||||||||||||||||||| Sbjct: 648800 tgcagtgggaggaggaggag 648819
>gb|AC102438.8| Mus musculus chromosome 5, clone RP24-137F10, complete sequence Length = 205785 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ggaggaggaggagcagagga 53 |||||||||||||||||||| Sbjct: 62392 ggaggaggaggagcagagga 62411
>gb|AC115922.9| Mus musculus chromosome 7, clone RP24-505K11, complete sequence Length = 134271 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 aagggaagagaagagaggag 104 |||||||||||||||||||| Sbjct: 10977 aagggaagagaagagaggag 10958
>ref|NM_015365.2| Homo sapiens Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region, gene 1 (AMMECR1), transcript variant 1, mRNA Length = 5431 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tgcagtgggaggaggaggag 46 |||||||||||||||||||| Sbjct: 181 tgcagtgggaggaggaggag 162
>ref|NM_001025580.1| Homo sapiens Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region, gene 1 (AMMECR1), transcript variant 2, mRNA Length = 5320 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tgcagtgggaggaggaggag 46 |||||||||||||||||||| Sbjct: 181 tgcagtgggaggaggaggag 162
>gb|AC137096.10| Mus musculus chromosome 8, clone RP24-473D4, complete sequence Length = 149463 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 aagggaagagaagagaggag 104 |||||||||||||||||||| Sbjct: 22106 aagggaagagaagagaggag 22087
>gb|BT013505.1| Lycopersicon esculentum clone 132193F, mRNA sequence Length = 1959 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 tatatgcagatgaagaaaaa 425 |||||||||||||||||||| Sbjct: 1616 tatatgcagatgaagaaaaa 1635
>gb|AY196160.1| Solanum tuberosum nematode resistance-like protein (Gro1-10) gene, Gro1-10-P41 allele, partial cds Length = 8306 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 269 tctggaaccctcctctgtttttatttct 296 ||||||||| |||||| ||||||||||| Sbjct: 3087 tctggaaccttcctctatttttatttct 3114
>gb|AC121264.8| Mus musculus chromosome 9, clone RP24-233F22, complete sequence Length = 194261 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ggaggaggaggagcagagga 53 |||||||||||||||||||| Sbjct: 12244 ggaggaggaggagcagagga 12225
>gb|AY588246.1| Homo sapiens epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) (EGFR) gene, complete cds Length = 192168 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tgcagtgggaggaggaggag 46 |||||||||||||||||||| Sbjct: 32426 tgcagtgggaggaggaggag 32407
>ref|XM_549183.2| PREDICTED: Canis familiaris similar to AMME syndrome candidate gene 1 protein, transcript variant 1 (LOC492063), mRNA Length = 1341 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tgcagtgggaggaggaggag 46 |||||||||||||||||||| Sbjct: 261 tgcagtgggaggaggaggag 242
>ref|XM_858227.1| PREDICTED: Canis familiaris similar to AMME syndrome candidate gene 1 protein, transcript variant 4 (LOC492063), mRNA Length = 912 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tgcagtgggaggaggaggag 46 |||||||||||||||||||| Sbjct: 124 tgcagtgggaggaggaggag 105
>ref|XM_858211.1| PREDICTED: Canis familiaris similar to AMME syndrome candidate gene 1 protein, transcript variant 3 (LOC492063), mRNA Length = 583 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tgcagtgggaggaggaggag 46 |||||||||||||||||||| Sbjct: 124 tgcagtgggaggaggaggag 105
>ref|XM_858187.1| PREDICTED: Canis familiaris similar to AMME syndrome candidate gene 1 protein, transcript variant 2 (LOC492063), mRNA Length = 639 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tgcagtgggaggaggaggag 46 |||||||||||||||||||| Sbjct: 124 tgcagtgggaggaggaggag 105
>gb|AC083880.5| Homo sapiens BAC clone RP11-634H22 from 7, complete sequence Length = 38486 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 tttttatttcttttcctttg 305 |||||||||||||||||||| Sbjct: 35191 tttttatttcttttcctttg 35210
>gb|AC127690.4| Mus musculus BAC clone RP24-215A3 from chromosome 17, complete sequence Length = 187751 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 agggaagagaagagaggagc 105 |||||||||||||||||||| Sbjct: 11834 agggaagagaagagaggagc 11815
>gb|AC124563.4| Mus musculus BAC clone RP23-206B15 from chromosome 6, complete sequence Length = 210092 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ggaggaggaggagcagagga 53 |||||||||||||||||||| Sbjct: 142350 ggaggaggaggagcagagga 142331
>gb|AC121854.2| Mus musculus BAC clone RP24-97A15 from 7, complete sequence Length = 185164 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 aagggaagagaagagaggag 104 |||||||||||||||||||| Sbjct: 35048 aagggaagagaagagaggag 35067
>gb|AC004926.2| Homo sapiens PAC clone RP5-910H9 from 7, complete sequence Length = 153556 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 aagggaagagaagagaggag 104 |||||||||||||||||||| Sbjct: 19861 aagggaagagaagagaggag 19842
>gb|AF098985.2| Caenorhabditis elegans cosmid C08G5, complete sequence Length = 40550 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ctctgtttttatttcttttc 300 |||||||||||||||||||| Sbjct: 18565 ctctgtttttatttcttttc 18546
>gb|AC165290.2| Mus musculus BAC clone RP23-343A4 from chromosome 13, complete sequence Length = 206249 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gggaggaggaggagcagagg 52 |||||||||||||||||||| Sbjct: 68108 gggaggaggaggagcagagg 68127
>gb|BC060813.1| Homo sapiens Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region, gene 1, mRNA (cDNA clone MGC:71655 IMAGE:30344824), complete cds Length = 3053 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tgcagtgggaggaggaggag 46 |||||||||||||||||||| Sbjct: 114 tgcagtgggaggaggaggag 95
>gb|AC110062.4| Homo sapiens chromosome 18, clone CTD-2125N24, complete sequence Length = 139550 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 402 gtggtatatgcagatgaagaaaaa 425 ||||||||||||||||| |||||| Sbjct: 45594 gtggtatatgcagatgatgaaaaa 45571
>gb|AC117403.4| Homo sapiens 12 BAC RP11-239E14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 121632 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 agacaagggaagagaagaga 100 |||||||||||||||||||| Sbjct: 69466 agacaagggaagagaagaga 69485
>gb|AC115100.3| Homo sapiens chromosome 18, clone RP11-237L15, complete sequence Length = 169152 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 ttttgctgggggtggttggg 216 |||||||||||||||||||| Sbjct: 99612 ttttgctgggggtggttggg 99593
>gb|AC015820.10| Homo sapiens chromosome 11, clone RP11-108G3, complete sequence Length = 165149 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 ggaggatttcttctttcttt 174 |||||||||||||||||||| Sbjct: 21171 ggaggatttcttctttcttt 21152
>gb|AC007566.2| Homo sapiens BAC clone CTB-10G5 from 7q21-7q22, complete sequence Length = 149194 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 aagggaagagaagagaggag 104 |||||||||||||||||||| Sbjct: 10871 aagggaagagaagagaggag 10852
>gb|AC093878.3| Homo sapiens BAC clone RP11-638O6 from 4, complete sequence Length = 176018 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 aagggaagagaagagaggag 104 |||||||||||||||||||| Sbjct: 117952 aagggaagagaagagaggag 117971
>gb|AC021651.17| Homo sapiens 12 BAC RP11-498B21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 67150 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 ttttatttcttttcctttgt 306 |||||||||||||||||||| Sbjct: 58541 ttttatttcttttcctttgt 58560
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 tgtttttatttcttttcctttgtt 307 ||||||| |||||||||||||||| Sbjct: 21563725 tgtttttttttcttttcctttgtt 21563748
>gb|AC100806.2| Homo sapiens chromosome 18, clone CTB-2341H11, complete sequence Length = 81641 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 gtttttatttcttttccttt 304 |||||||||||||||||||| Sbjct: 10057 gtttttatttcttttccttt 10076
>gb|AC013477.7| Homo sapiens BAC clone RP11-559F19 from 4, complete sequence Length = 182092 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 ctctgtttttatttcttttccttt 304 |||||||||| ||||||||||||| Sbjct: 52552 ctctgtttttttttcttttccttt 52575
>emb|AL356969.12| Human DNA sequence from clone RP11-411F9 on chromosome 6, complete sequence Length = 169184 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agtgggaggaggaggagcag 49 |||||||||||||||||||| Sbjct: 129367 agtgggaggaggaggagcag 129348
>gb|AC091317.3| Homo sapiens chromosome 18, clone CTD-2338I4, complete sequence Length = 105168 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 ttttgctgggggtggttggg 216 |||||||||||||||||||| Sbjct: 102292 ttttgctgggggtggttggg 102311
>emb|AL031319.5|HS364I1 Human DNA sequence from clone RP3-364I1 on chromosome Xq23 Contains a novel gene, part of the AMMECR1 gene for Alport syndrome (mental retardation, midface hypoplasia and elliptocytosis chromosomal region, gene 1) (FLJ341111), the gene for a novel protein similar to guanine nucleotide binding protein (G protein) gamma 5 (GNG5) and a CpG island, complete sequence Length = 98770 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tgcagtgggaggaggaggag 46 |||||||||||||||||||| Sbjct: 37240 tgcagtgggaggaggaggag 37259
>gb|AC160247.2| Pan troglodytes BAC clone CH251-540N18 from chromosome 7, complete sequence Length = 168031 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 aagggaagagaagagaggag 104 |||||||||||||||||||| Sbjct: 44174 aagggaagagaagagaggag 44193
>gb|AC007768.5| Homo sapiens chromosome 18, clone RP11-540M4, complete sequence Length = 175579 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 gtttttatttcttttccttt 304 |||||||||||||||||||| Sbjct: 153 gtttttatttcttttccttt 134
>gb|AC080004.12| Homo sapiens 3q BAC RP11-307O15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 206162 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 ggaggatttcttctttcttt 174 |||||||||||||||||||| Sbjct: 175634 ggaggatttcttctttcttt 175653
>gb|AF380786.1|AF380786 Pseudoeurycea smithi clone e15.4 cytochrome b (cytB) gene, partial cds; mitochondrial gene for mitochondrial product Length = 567 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tatatgcagatgaagaaaaa 425 |||||||||||||||||||| Sbjct: 227 tatatgcagatgaagaaaaa 208
>gb|AF380780.1|AF380780 Pseudoeurycea leprosa clone e33.44 cytochrome b (cytB) gene, partial cds; mitochondrial gene for mitochondrial product Length = 547 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tatatgcagatgaagaaaaa 425 |||||||||||||||||||| Sbjct: 218 tatatgcagatgaagaaaaa 199
>gb|AF380779.1|AF380779 Pseudoeurycea leprosa clone e15.3 cytochrome b (cytB) gene, partial cds; mitochondrial gene for mitochondrial product Length = 569 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tatatgcagatgaagaaaaa 425 |||||||||||||||||||| Sbjct: 227 tatatgcagatgaagaaaaa 208
>gb|AF380777.1|AF380777 Pseudoeurycea leprosa clone e33.16 cytochrome b (cytB) gene, partial cds; mitochondrial gene for mitochondrial product Length = 569 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tatatgcagatgaagaaaaa 425 |||||||||||||||||||| Sbjct: 227 tatatgcagatgaagaaaaa 208
>gb|AF380776.1|AF380776 Pseudoeurycea leprosa clone e33.1 cytochrome b (cytB) gene, partial cds; mitochondrial gene for mitochondrial product Length = 569 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tatatgcagatgaagaaaaa 425 |||||||||||||||||||| Sbjct: 227 tatatgcagatgaagaaaaa 208
>gb|AF380769.1|AF380769 Lineatriton lineolus clone e35.12 cytochrome b (cytB) gene, partial cds; mitochondrial gene for mitochondrial product Length = 540 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tatatgcagatgaagaaaaa 425 |||||||||||||||||||| Sbjct: 227 tatatgcagatgaagaaaaa 208
>gb|AF380768.1|AF380768 Lineatriton lineolus clone eE37.5 cytochrome b (cytB) gene, partial cds; mitochondrial gene for mitochondrial product Length = 507 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tatatgcagatgaagaaaaa 425 |||||||||||||||||||| Sbjct: 206 tatatgcagatgaagaaaaa 187
>gb|AF380764.1|AF380764 Lineatriton lineolus clone ee35.10 cytochrome b (cytB) gene, partial cds; mitochondrial gene for mitochondrial product Length = 539 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tatatgcagatgaagaaaaa 425 |||||||||||||||||||| Sbjct: 227 tatatgcagatgaagaaaaa 208
>gb|AF380762.1|AF380762 Lineatriton lineolus clone e35.11 cytochrome b (cytB) gene, partial cds; mitochondrial gene for mitochondrial product Length = 505 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tatatgcagatgaagaaaaa 425 |||||||||||||||||||| Sbjct: 192 tatatgcagatgaagaaaaa 173
>gb|AF380761.1|AF380761 Lineatriton lineolus clone e34.7 cytochrome b (cytB) gene, partial cds; mitochondrial gene for mitochondrial product Length = 569 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tatatgcagatgaagaaaaa 425 |||||||||||||||||||| Sbjct: 227 tatatgcagatgaagaaaaa 208
>gb|AF380760.1|AF380760 Lineatriton lineolus clone e34.4 cytochrome b (cytB) gene, partial cds; mitochondrial gene for mitochondrial product Length = 569 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tatatgcagatgaagaaaaa 425 |||||||||||||||||||| Sbjct: 227 tatatgcagatgaagaaaaa 208
>gb|AF380759.1|AF380759 Lineatriton lineolus clone e33.5 cytochrome b (cytB) gene, partial cds; mitochondrial gene for mitochondrial product Length = 569 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tatatgcagatgaagaaaaa 425 |||||||||||||||||||| Sbjct: 227 tatatgcagatgaagaaaaa 208
>gb|AF380758.1|AF380758 Lineatriton lineolus clone e33.6 cytochrome b (cytB) gene, partial cds; mitochondrial gene for mitochondrial product Length = 569 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tatatgcagatgaagaaaaa 425 |||||||||||||||||||| Sbjct: 227 tatatgcagatgaagaaaaa 208
>emb|CR858935.1| Pongo pygmaeus mRNA; cDNA DKFZp469O0323 (from clone DKFZp469O0323) Length = 3158 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tgcagtgggaggaggaggag 46 |||||||||||||||||||| Sbjct: 111 tgcagtgggaggaggaggag 92
>emb|AJ007014.1|HSA7014 Homo sapiens mRNA for AMMECR1 protein Length = 1300 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tgcagtgggaggaggaggag 46 |||||||||||||||||||| Sbjct: 268 tgcagtgggaggaggaggag 249
>emb|AL645994.7| Mouse DNA sequence from clone RP23-104F14 on chromosome 11 Contains the Upp gene for uridine phosphorylase, a polymerase (RNA) II (DNA directed) (Polr2c) pseudogene and the 5' end of the Abca13 gene for ATP-binding cassette sub-family A (ABC1) member 13, complete sequence Length = 136162 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ggaggaggaggagcagagga 53 |||||||||||||||||||| Sbjct: 91979 ggaggaggaggagcagagga 91960
>emb|AL929371.6| Mouse DNA sequence from clone RP23-176O5 on chromosome 11 Contains a ribosomal protein S2 (Rps2) pseudogene, a novel gene, an apurinic/apyrimidinic endonuclease 2 (Apex2) pseudogene, the Rtn4 gene for reticulon 4, the 3' end of the gene for a novel protein (C230094A16Rik) (MGC38936) and a CpG island, complete sequence Length = 212042 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ggaggaggaggagcagagga 53 |||||||||||||||||||| Sbjct: 3768 ggaggaggaggagcagagga 3787
>emb|BX510646.5| Zebrafish DNA sequence from clone CH211-221B16 in linkage group 9, complete sequence Length = 200321 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 agatgaagaaaaagatgaat 432 |||||||||||||||||||| Sbjct: 87921 agatgaagaaaaagatgaat 87940
>gb|AF451203.1| Pseudoeurycea smithi clone e34.1 cytochrome b (Cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 570 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tatatgcagatgaagaaaaa 425 |||||||||||||||||||| Sbjct: 228 tatatgcagatgaagaaaaa 209
>gb|AC108134.3| Homo sapiens chromosome 16 clone RP11-473M20, complete sequence Length = 180354 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agtgggaggaggaggagcag 49 |||||||||||||||||||| Sbjct: 64209 agtgggaggaggaggagcag 64228 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agtgggaggaggaggagcag 49 |||||||||||||||||||| Sbjct: 83842 agtgggaggaggaggagcag 83861
>gb|AC021631.6|AC021631 Mus musculus, clone RP23-38J11, complete sequence Length = 160618 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 aagggaagagaagagaggag 104 |||||||||||||||||||| Sbjct: 155873 aagggaagagaagagaggag 155892
>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020D05 Length = 158760 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 tgtttttatttcttttcctttgtt 307 ||||||| |||||||||||||||| Sbjct: 52675 tgtttttttttcttttcctttgtt 52698
>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020C11 Length = 163328 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 tgtttttatttcttttcctttgtt 307 ||||||| |||||||||||||||| Sbjct: 158652 tgtttttttttcttttcctttgtt 158675
>gb|AC016907.6| Homo sapiens BAC clone RP11-439P4 from 2, complete sequence Length = 202827 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 atcagacaagggaagagaag 97 |||||||||||||||||||| Sbjct: 185213 atcagacaagggaagagaag 185194
>gb|AC015978.4|AC015978 Homo sapiens BAC clone RP11-529I21 from Y, complete sequence Length = 178780 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ttttatttcttttcctttgt 306 |||||||||||||||||||| Sbjct: 113351 ttttatttcttttcctttgt 113332
>gb|AC007241.3|AC007241 Homo sapiens BAC clone RP11-157F24 from Y, complete sequence Length = 161868 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 ttttatttcttttcctttgt 306 |||||||||||||||||||| Sbjct: 121666 ttttatttcttttcctttgt 121685
>gb|AC006977.3|AC006977 Homo sapiens PAC clone RP5-1091E12 from 7p11.2-p21, complete sequence Length = 177998 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tgcagtgggaggaggaggag 46 |||||||||||||||||||| Sbjct: 39709 tgcagtgggaggaggaggag 39690
>dbj|BS000103.1| Pan troglodytes chromosome 22 clone:PTB-031J04, map 22, complete sequences Length = 164274 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agtgggaggaggaggagcag 49 |||||||||||||||||||| Sbjct: 22683 agtgggaggaggaggagcag 22664
>emb|CR378283.1| Pinus pinaster SSR, clone PPD3H10 Length = 121 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 gcagtgggaggaggaggagcagag 51 |||||||||||||||| ||||||| Sbjct: 50 gcagtgggaggaggagaagcagag 73
>emb|BX571979.8| Zebrafish DNA sequence from clone DKEYP-51C11 in linkage group 13, complete sequence Length = 165275 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 cagatgaagaaaaagatgaa 431 |||||||||||||||||||| Sbjct: 114659 cagatgaagaaaaagatgaa 114678
>gb|AC120394.10| Mus musculus chromosome 9, clone RP24-325N9, complete sequence Length = 206641 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ggaggaggaggagcagagga 53 |||||||||||||||||||| Sbjct: 156044 ggaggaggaggagcagagga 156025
>emb|BX648797.1|HSM808948 Homo sapiens mRNA; cDNA DKFZp686L16148 (from clone DKFZp686L16148) Length = 3065 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tgcagtgggaggaggaggag 46 |||||||||||||||||||| Sbjct: 143 tgcagtgggaggaggaggag 124
>emb|AL844482.6| Mouse DNA sequence from clone RP23-81A18 on chromosome X, complete sequence Length = 141997 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 tgggaggaggaggagcagag 51 |||||||||||||||||||| Sbjct: 72916 tgggaggaggaggagcagag 72897
>dbj|AP002853.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-46K15, complete sequence Length = 177463 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 ccctcctctgtttttatttctttt 299 ||||||||||||||| |||||||| Sbjct: 54806 ccctcctctgtttttttttctttt 54783
>emb|AJ328777.1|HSA328777 Homo sapiens genomic sequence surrounding NotI site, clone NR1-MK23R Length = 752 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 ttctggaaccctcctctgttttta 291 ||||||||||||| |||||||||| Sbjct: 497 ttctggaaccctcatctgttttta 474
>gb|AC126275.3| Mus musculus BAC clone RP23-111N17 from 14, complete sequence Length = 211542 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 gggaggaggaggagcagagg 52 |||||||||||||||||||| Sbjct: 184487 gggaggaggaggagcagagg 184468
>gb|AC110562.17| Mus musculus chromosome 17, clone RP23-268M4, complete sequence Length = 165190 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 agggaagagaagagaggagc 105 |||||||||||||||||||| Sbjct: 32914 agggaagagaagagaggagc 32933
>gb|AC133864.32| Medicago truncatula clone mth2-18d12, complete sequence Length = 125734 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 gtttttatttcttttccttt 304 |||||||||||||||||||| Sbjct: 27854 gtttttatttcttttccttt 27873
>emb|AJ012221.1|HSA012221 Homo sapiens ammecr1 gene, exon 1 and joined CDS (alternative transcripts) Length = 651 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tgcagtgggaggaggaggag 46 |||||||||||||||||||| Sbjct: 268 tgcagtgggaggaggaggag 249
>emb|BX004787.8| Zebrafish DNA sequence from clone DKEY-28B17 in linkage group 23, complete sequence Length = 198036 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 tctgtttttatttcttttcc 301 |||||||||||||||||||| Sbjct: 45020 tctgtttttatttcttttcc 45001
>emb|AL845485.16| Mouse DNA sequence from clone RP23-237D23 on chromosome 2, complete sequence Length = 230213 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 tttttatttcttttcctttg 305 |||||||||||||||||||| Sbjct: 115008 tttttatttcttttcctttg 114989
>gb|AC130831.4| Mus musculus BAC clone RP24-80P9 from 14, complete sequence Length = 233804 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gggaggaggaggagcagagg 52 |||||||||||||||||||| Sbjct: 230363 gggaggaggaggagcagagg 230382
>gb|AC140945.1| Gallus gallus BAC clone TAM33-20E22 from chromosome ul, complete sequence Length = 143278 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tgcagtgggaggaggaggag 46 |||||||||||||||||||| Sbjct: 5583 tgcagtgggaggaggaggag 5602
>emb|AJ003147.1|HSAJ03147 Homo sapiens complete genomic sequence between D16S3070 and D16S3275, containing Familial Mediterranean Fever gene disease Length = 239566 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agtgggaggaggaggagcag 49 |||||||||||||||||||| Sbjct: 11896 agtgggaggaggaggagcag 11915 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agtgggaggaggaggagcag 49 |||||||||||||||||||| Sbjct: 31529 agtgggaggaggaggagcag 31548
>emb|AL731692.8| Mouse DNA sequence from clone RP23-245M18 on chromosome X, complete sequence Length = 169309 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 tgggaggaggaggagcagag 51 |||||||||||||||||||| Sbjct: 5064 tgggaggaggaggagcagag 5045
>emb|AL672241.6| Mouse DNA sequence from clone RP23-147D3 on chromosome 2, complete sequence Length = 197925 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 tgtttttatttcttttcctt 303 |||||||||||||||||||| Sbjct: 92129 tgtttttatttcttttcctt 92148
>emb|AL844531.6| Mouse DNA sequence from clone RP23-211J18 on chromosome 2, complete sequence Length = 181194 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 aagggaagagaagagaggag 104 |||||||||||||||||||| Sbjct: 97326 aagggaagagaagagaggag 97307
>emb|AL772242.7| Mouse DNA sequence from clone RP23-15E4 on chromosome 2, complete sequence Length = 196548 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ggaggaggaggagcagagga 53 |||||||||||||||||||| Sbjct: 132305 ggaggaggaggagcagagga 132324
>emb|AL671900.5| Mouse DNA sequence from clone RP23-282O5 on chromosome X, complete sequence Length = 185389 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 agacaagggaagagaagaga 100 |||||||||||||||||||| Sbjct: 78256 agacaagggaagagaagaga 78237
>gb|AC167975.3| Mus musculus BAC clone RP23-171A14 from chromosome 13, complete sequence Length = 220418 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gggaggaggaggagcagagg 52 |||||||||||||||||||| Sbjct: 154239 gggaggaggaggagcagagg 154258 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 94,505,561 Number of extensions: 7184886 Number of successful extensions: 1060052 Number of sequences better than 10.0: 169 Number of HSP's gapped: 1060051 Number of HSP's successfully gapped: 171 Length of query: 455 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 433 Effective length of database: 18,508,616,841 Effective search space: 8014231092153 Effective search space used: 8014231092153 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 13 (26.3 bits)
