ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf176o11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os05g0252100:Os05g0252100 | 31 | 0.78 | 2 | Os07g0543300:Os07g0543300 | 29 | 2.9 | 3 | Os05g0551900:Os05g0551900 | 29 | 2.9 | 4 | Os07g0134700:Os07g0134700 | 28 | 5.0 | 5 | AK105130:Os01g0276900 | 28 | 5.0 | 6 | AK109823:Os04g0607400 | 28 | 6.5 | 7 | AK106108:Os04g0607400 | 28 | 6.5 | 8 | AK106066:Os04g0607400 | 28 | 6.5 | 9 | AK066668:Os04g0607400 | 28 | 6.5 | 10 | AK063279:Os04g0607400 | 28 | 6.5 | 11 | AK106868:Os06g0105300 | 28 | 6.6 | 12 | AK073608:Os02g0313400 | 28 | 6.6 | 13 | AK066724:Os03g0774300 | 28 | 6.6 | 14 | Os01g0937900:Os01g0937900 | 27 | 8.6 | 15 | AK111154: | 27 | 8.6 | 16 | AK108551:Os04g0566700 | 27 | 8.6 | 17 | AK100441:Os08g0292000 | 27 | 8.6 | 18 | AK099931:Os02g0121000 | 27 | 8.6 | 19 | AK073784:Os08g0292000 | 27 | 8.6 |
|---|
>Os05g0252100:Os05g0252100 | Length = 488 Score = 30.8 bits (68), Expect = 0.78 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = -2 Query: 147 PCTRGRGSDGDQLRARAAARLEHGGRGDGMARS 49 P RGR G +++ AR+EHG R DG A S Sbjct: 30 PRRRGRRGGGGTVKSWVRARMEHGRRRDGAAPS 62
>Os07g0543300:Os07g0543300 | Length = 1020 Score = 28.9 bits (63), Expect = 2.9 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 8/58 (13%) Frame = -3 Query: 185 PSKTERSTGRIP---SRAPEGEGATEINSGPELLLGWSTADAATA-----WREAILPS 36 PS+ R T +P +RAP S PE LLGW+TA+ A + W A P+ Sbjct: 281 PSQDWRYTPDVPRPRTRAPVHLALRSQPSHPEGLLGWATAETAKSHLSARWTGAEFPT 338
>Os05g0551900:Os05g0551900 | Length = 798 Score = 28.9 bits (63), Expect = 2.9 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%) Frame = +1 Query: 19 HLASPPLGKIASRHAVAAS---AVLQPSSSSGPELISVAPSPS 138 HL PL ++SRHA ++S A SSSSG AP+P+ Sbjct: 19 HLRLLPLRLLSSRHASSSSSTTAAASSSSSSGGNRAPPAPNPT 61
>Os07g0134700:Os07g0134700 | Length = 608 Score = 28.1 bits (61), Expect = 5.0 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Frame = +1 Query: 7 HFSLHLASP---PLGKIASRHAVAASAVLQPSSSSGPELISVAPSPS 138 H LHL +P P ++ A AAS + P+++ P L AP PS Sbjct: 14 HLHLHLHTPKPSPPRRLRLAAAAAASRLQNPTTTHYPNLPPPAPPPS 60
>AK105130:Os01g0276900 | Length = 211 Score = 28.1 bits (61), Expect = 5.0 Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = -2 Query: 210 RRLLGTPRAVEDGEEHGEDPFPCTRGRGSDGD-QLRARAAARLEHGGRGDGMA 55 RR L A + G G+ GRG GD + R RAA R GG G G A Sbjct: 63 RRRLPEGAASQGGGGGGDADDVDGGGRGGGGDGRSRGRAAGRRRRGGGGGGEA 115
>AK109823:Os04g0607400 | Length = 198 Score = 27.7 bits (60), Expect = 6.5 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -3 Query: 86 WSTADAATAWREAILPSGGEARWREKWV 3 W+ + AA WR A +GG RW WV Sbjct: 119 WTASAAAARWRPASCSAGGFCRW---WV 143
>AK106108:Os04g0607400 | Length = 198 Score = 27.7 bits (60), Expect = 6.5 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -3 Query: 86 WSTADAATAWREAILPSGGEARWREKWV 3 W+ + AA WR A +GG RW WV Sbjct: 119 WTASAAAARWRPASCSAGGFCRW---WV 143
>AK106066:Os04g0607400 | Length = 198 Score = 27.7 bits (60), Expect = 6.5 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -3 Query: 86 WSTADAATAWREAILPSGGEARWREKWV 3 W+ + AA WR A +GG RW WV Sbjct: 119 WTASAAAARWRPASCSAGGFCRW---WV 143
>AK066668:Os04g0607400 | Length = 323 Score = 27.7 bits (60), Expect = 6.5 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -3 Query: 86 WSTADAATAWREAILPSGGEARWREKWV 3 W+ + AA WR A +GG RW WV Sbjct: 244 WTASAAAARWRPASCSAGGFCRW---WV 268
>AK063279:Os04g0607400 | Length = 322 Score = 27.7 bits (60), Expect = 6.5 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -3 Query: 86 WSTADAATAWREAILPSGGEARWREKWV 3 W+ + AA WR A +GG RW WV Sbjct: 243 WTASAAAARWRPASCSAGGFCRW---WV 267
>AK106868:Os06g0105300 | Length = 480 Score = 27.7 bits (60), Expect = 6.6 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = -2 Query: 198 GTPRAVEDGEEHGEDPFPCTRGRGSDGDQLRARAAARLEHGG 73 G P AV G + G G G++G ARAAA +EHGG Sbjct: 390 GVPVAVVVGGDGGRRVLRWFGGAGAEGG---ARAAAVVEHGG 428
>AK073608:Os02g0313400 | Length = 271 Score = 27.7 bits (60), Expect = 6.6 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -2 Query: 138 RGRGSDGDQLRARAAARLEHGGRGDGMAR 52 RG G+ +QL RA L GGRG G R Sbjct: 231 RGEGAARNQLVNRAFEGLSRGGRGSGRGR 259
>AK066724:Os03g0774300 | Length = 569 Score = 27.7 bits (60), Expect = 6.6 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = +1 Query: 19 HLA--SPPLGKIASRHAVAASAVLQPSSSSGPELISVAPSPSGARE 150 HLA SPPL + + + S+ PSS+SGP S +GA E Sbjct: 14 HLAPFSPPLLLFFASASSSCSSAASPSSASGPRGCSAVRMETGAVE 59
>Os01g0937900:Os01g0937900 | Length = 158 Score = 27.3 bits (59), Expect = 8.6 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +1 Query: 40 GKIASRHAVAA-SAVLQPSSSSGPELISVAPSPSGAREG 153 G RHA A +AVL P+ + P+++ + PSP +G Sbjct: 48 GHGGGRHAAPAPAAVLPPAPALSPDIMPLLPSPGPDSDG 86
>AK111154: | Length = 961 Score = 27.3 bits (59), Expect = 8.6 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +1 Query: 31 PPLGKIASRHAVAASAVLQPSSSSGPELISVAPSPS 138 P +ASRH V+AS +P+SSS + + A S S Sbjct: 3 PSTTTLASRHPVSASRSTEPASSSVSQPLPSAASTS 38
>AK108551:Os04g0566700 | Length = 187 Score = 27.3 bits (59), Expect = 8.6 Identities = 27/106 (25%), Positives = 37/106 (34%), Gaps = 17/106 (16%) Frame = -2 Query: 321 GMKTMWNEASEGDGELLKSGAHPNRFCLKKKRKQTTSRRLLGTPRAVEDGEEHGEDPFPC 142 G+K EA G+ L+ P L + R + +RR R D E G P Sbjct: 79 GLKRAAEEAERGESMKLRGQPRPQPVRLPRARVRQPARRRRAALRG--DREHRGGPPRRR 136 Query: 141 TRG-----------------RGSDGDQLRARAAARLEHGGRGDGMA 55 G R + GD+ + R A GGRG+ A Sbjct: 137 RLGQHRRRRDRYRRALPRGCRPAGGDRRQLRRGAHGRRGGRGEASA 182
>AK100441:Os08g0292000 | Length = 786 Score = 27.3 bits (59), Expect = 8.6 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = +1 Query: 40 GKIASRHAVAASAVLQPSSSSGPELISVAPSPSGAREGIL 159 G +AS ++++AVL P S+ ++ AP+ SGA IL Sbjct: 196 GFVASGSNLSSNAVLMPVSAMPSSVLQPAPAVSGANFPIL 235
>AK099931:Os02g0121000 | Length = 567 Score = 27.3 bits (59), Expect = 8.6 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +1 Query: 22 LASPPLGKIASRHAVAASAVLQPSSSSGPELISVAPSPSG 141 L P L + S A +ASA P + GP + APSP+G Sbjct: 23 LLRPHLRRTLSVRA-SASASASPDGAGGPVRVRFAPSPTG 61
>AK073784:Os08g0292000 | Length = 717 Score = 27.3 bits (59), Expect = 8.6 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = +1 Query: 40 GKIASRHAVAASAVLQPSSSSGPELISVAPSPSGAREGIL 159 G +AS ++++AVL P S+ ++ AP+ SGA IL Sbjct: 196 GFVASGSNLSSNAVLMPVSAMPSSVLQPAPAVSGANFPIL 235 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,247,043 Number of extensions: 324668 Number of successful extensions: 1426 Number of sequences better than 10.0: 19 Number of HSP's gapped: 1426 Number of HSP's successfully gapped: 19 Length of query: 209 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 113 Effective length of database: 11,555,919 Effective search space: 1305818847 Effective search space used: 1305818847 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
