| Clone Name | FLbaf176o11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 65.9 bits (33), Expect = 2e-07 Identities = 40/41 (97%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 407 tgaactatccagaggactgaggccgtggtcgtgatcgtggg 447 |||||||||||||||||||||| |||||||||||||||||| Sbjct: 27298 tgaactatccagaggactgagg-cgtggtcgtgatcgtggg 27337
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 58.0 bits (29), Expect = 4e-05 Identities = 39/41 (95%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 407 tgaactatccagaggactgaggccgtggtcgtgatcgtggg 447 ||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 63964 tgaactatccataggactgag-ccgtggtcgtgatcgtggg 64003 Score = 58.0 bits (29), Expect = 4e-05 Identities = 39/41 (95%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 407 tgaactatccagaggactgaggccgtggtcgtgatcgtggg 447 |||||||||||||||||||| |||||||| ||||||||||| Sbjct: 74769 tgaactatccagaggactga-gccgtggttgtgatcgtggg 74808
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 54.0 bits (27), Expect = 6e-04 Identities = 43/47 (91%), Gaps = 1/47 (2%) Strand = Plus / Minus Query: 401 tgtacatgaactatccagaggactgaggccgtggtcgtgatcgtggg 447 ||||| ||||||||||||| || |||||| ||||||||||||||||| Sbjct: 70928 tgtacgtgaactatccagaagattgaggc-gtggtcgtgatcgtggg 70883 Score = 54.0 bits (27), Expect = 6e-04 Identities = 43/47 (91%), Gaps = 1/47 (2%) Strand = Plus / Minus Query: 401 tgtacatgaactatccagaggactgaggccgtggtcgtgatcgtggg 447 ||||| ||||||||||||| || |||||| ||||||||||||||||| Sbjct: 110643 tgtacgtgaactatccagaagattgaggc-gtggtcgtgatcgtggg 110598
>emb|CT830120.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN007B05, full insert sequence Length = 834 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 214 cgtcgtctgcttcctcttcttcttcag 240 |||||||| |||||||||||||||||| Sbjct: 627 cgtcgtcttcttcctcttcttcttcag 653
>dbj|AK241164.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065116B16, full insert sequence Length = 1322 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 214 cgtcgtctgcttcctcttcttcttcag 240 |||||||| |||||||||||||||||| Sbjct: 402 cgtcgtcttcttcctcttcttcttcag 376
>ref|NM_001072863.1| Oryza sativa (japonica cultivar-group) Os12g0188700 (Os12g0188700) mRNA, partial cds Length = 793 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 214 cgtcgtctgcttcctcttcttcttcag 240 |||||||| |||||||||||||||||| Sbjct: 545 cgtcgtcttcttcctcttcttcttcag 571
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 214 cgtcgtctgcttcctcttcttcttcag 240 |||||||| |||||||||||||||||| Sbjct: 4461058 cgtcgtcttcttcctcttcttcttcag 4461032 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 212 gacgtcgtctgcttcctcttcttc 235 ||||||||| |||||||||||||| Sbjct: 27367158 gacgtcgtcggcttcctcttcttc 27367181
>emb|AJ005841.1|OSA5841 Oryza sativa mRNA for thioredoxin M Length = 819 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 214 cgtcgtctgcttcctcttcttcttcag 240 |||||||| |||||||||||||||||| Sbjct: 545 cgtcgtcttcttcctcttcttcttcag 571
>dbj|AK120500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122B18, full insert sequence Length = 767 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 214 cgtcgtctgcttcctcttcttcttcag 240 |||||||| |||||||||||||||||| Sbjct: 549 cgtcgtcttcttcctcttcttcttcag 575
>dbj|AK061678.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H09, full insert sequence Length = 945 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 214 cgtcgtctgcttcctcttcttcttcag 240 |||||||| |||||||||||||||||| Sbjct: 609 cgtcgtcttcttcctcttcttcttcag 635
>emb|AL954157.3|CNS08CCV Oryza sativa chromosome 12, . BAC OSJNBa0042N11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168699 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 214 cgtcgtctgcttcctcttcttcttcag 240 |||||||| |||||||||||||||||| Sbjct: 43438 cgtcgtcttcttcctcttcttcttcag 43464
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 547 ctcttatcagatggcaagtgta 568 |||||||||||||||||||||| Sbjct: 11759761 ctcttatcagatggcaagtgta 11759782
>gb|AC105263.2| Drosophila melanogaster 3L BAC RP98-48G3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 153440 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 547 ctcttatcagatggcaagtgta 568 |||||||||||||||||||||| Sbjct: 48573 ctcttatcagatggcaagtgta 48594
>ref|XM_697224.1| PREDICTED: Danio rerio hypothetical protein LOC554625 (LOC554625), mRNA Length = 2478 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 cgtcgtctgcttcctcttcttc 235 |||||||||||||||||||||| Sbjct: 94 cgtcgtctgcttcctcttcttc 115
>emb|AL590146.2| Zebrafish DNA sequence from clone RP71-20I5 in linkage group 9 Contains a gene for a novel protein similar to human FLJ20730 protein, a gene for a novel protein similar to rat steroid sensitive gene-1 protein (SSG-1), a gene for a novel protein similar to vertebrate coagulation factor V and VIII, a gene for a novel protein similar to human G-protein coupled receptor RE2, a gene for a novel transcript and a CpG island, complete sequence Length = 121086 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 214 cgtcgtctgcttcctcttcttc 235 |||||||||||||||||||||| Sbjct: 74897 cgtcgtctgcttcctcttcttc 74876
>emb|CR855138.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0118P15, complete sequence Length = 92002 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctccctccacctcgcctcgcc 32 ||||||||||||||||||||| Sbjct: 40461 ctccctccacctcgcctcgcc 40481
>gb|AC111125.11| Mus musculus chromosome 9, clone RP23-331P8, complete sequence Length = 260036 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 468 agttttacttgtttcatgttc 488 ||||||||||||||||||||| Sbjct: 114328 agttttacttgtttcatgttc 114308
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 atgccgtcgccgcgtccgccg 79 ||||||||||||||||||||| Sbjct: 3310438 atgccgtcgccgcgtccgccg 3310418
>ref|XM_652203.1| Entamoeba histolytica HM-1:IMSS TFIID subunit (3.t00043) partial mRNA Length = 3492 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 216 tcgtctgcttcctcttcttcttcag 240 |||||| |||||||||||||||||| Sbjct: 2555 tcgtcttcttcctcttcttcttcag 2531
>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete sequence Length = 152172 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctccctccacctcgcctcgcc 32 ||||||||||||||||||||| Sbjct: 145264 ctccctccacctcgcctcgcc 145284
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ctccctccacctcgcctcgcc 32 ||||||||||||||||||||| Sbjct: 19231117 ctccctccacctcgcctcgcc 19231097
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctccctccacctcgcctcgcc 32 ||||||||||||||||||||| Sbjct: 30503190 ctccctccacctcgcctcgcc 30503210 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 22417301 tctgcttcctcttcttcttc 22417320
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 ctccctccacctcgcctcgcc 32 ||||||||||||||||||||| Sbjct: 136567 ctccctccacctcgcctcgcc 136587
>ref|XR_026680.1| PREDICTED: Gallus gallus hypothetical protein LOC769919 (LOC769919), mRNA Length = 1770 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 tgctccagccgagcagcagc 99 |||||||||||||||||||| Sbjct: 742 tgctccagccgagcagcagc 723
>ref|XM_419755.2| PREDICTED: Gallus gallus HD domain containing 2 (HDDC2), mRNA Length = 1003 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 15 cctccacctcgcctcgccgccgctaggt 42 |||||||||||| |||||||||||||| Sbjct: 78 cctccacctcgcgacgccgccgctaggt 51
>emb|CR855170.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818E04, complete sequence Length = 146307 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 94928 tctgcttcctcttcttcttc 94947
>ref|NM_001073906.1| Oryza sativa (japonica cultivar-group) Os12g0637800 (Os12g0637800) mRNA, partial cds Length = 1854 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 gacgtcgtctgcttcctcttcttc 235 ||||||||| |||||||||||||| Sbjct: 916 gacgtcgtcggcttcctcttcttc 893
>ref|NM_001069993.1| Oryza sativa (japonica cultivar-group) Os09g0475200 (Os09g0475200) mRNA, complete cds Length = 531 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ccacctcgcctcgccgccgc 37 |||||||||||||||||||| Sbjct: 172 ccacctcgcctcgccgccgc 153 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ccacctcgcctcgccgccgc 37 |||||||||||||||||||| Sbjct: 222 ccacctcgcctcgccgccgc 203
>ref|NM_001059474.1| Oryza sativa (japonica cultivar-group) Os04g0450400 (Os04g0450400) mRNA, complete cds Length = 1544 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 1035 tctgcttcctcttcttcttc 1016
>emb|AM236080.1| Rhizobium leguminosarum bv. viciae chromosome complete genome, strain 3841 Length = 5057142 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cgcgtccgccgtgctccagc 88 |||||||||||||||||||| Sbjct: 1997435 cgcgtccgccgtgctccagc 1997454
>ref|XM_001169180.1| PREDICTED: Pan troglodytes similar to KIAA1835 protein, transcript variant 2 (LOC458980), mRNA Length = 3753 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 1296 tctgcttcctcttcttcttc 1277
>ref|XM_001169302.1| PREDICTED: Pan troglodytes similar to KIAA1835 protein, transcript variant 7 (LOC458980), mRNA Length = 5047 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 2590 tctgcttcctcttcttcttc 2571
>ref|XM_001169230.1| PREDICTED: Pan troglodytes similar to KIAA1835 protein, transcript variant 4 (LOC458980), mRNA Length = 3937 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 1480 tctgcttcctcttcttcttc 1461
>ref|XM_001169322.1| PREDICTED: Pan troglodytes similar to KIAA1835 protein, transcript variant 8 (LOC458980), mRNA Length = 4577 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 2120 tctgcttcctcttcttcttc 2101
>ref|XM_001169248.1| PREDICTED: Pan troglodytes similar to KIAA1835 protein, transcript variant 5 (LOC458980), mRNA Length = 4597 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 2140 tctgcttcctcttcttcttc 2121
>ref|XM_001169198.1| PREDICTED: Pan troglodytes similar to KIAA1835 protein, transcript variant 3 (LOC458980), mRNA Length = 3850 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 1393 tctgcttcctcttcttcttc 1374
>ref|XM_001169276.1| PREDICTED: Pan troglodytes similar to KIAA1835 protein, transcript variant 6 (LOC458980), mRNA Length = 3805 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 1348 tctgcttcctcttcttcttc 1329
>ref|XM_515261.2| PREDICTED: Pan troglodytes similar to KIAA1835 protein, transcript variant 9 (LOC458980), mRNA Length = 4324 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 1867 tctgcttcctcttcttcttc 1848
>ref|XM_001169029.1| PREDICTED: Pan troglodytes similar to KIAA1835 protein, transcript variant 1 (LOC458980), mRNA Length = 2281 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 1431 tctgcttcctcttcttcttc 1412
>ref|XM_001121415.1| PREDICTED: Apis mellifera similar to BarH1 CG5529-PA (LOC725590), mRNA Length = 1707 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctgcttcctcttcttcttca 239 |||||||||||||||||||| Sbjct: 1683 ctgcttcctcttcttcttca 1664
>ref|XR_003410.1| PREDICTED: Mus musculus hypothetical protein LOC671416 (LOC671416), mRNA Length = 270 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 77 tctgcttcctcttcttcttc 58
>ref|XM_970187.1| PREDICTED: Tribolium castaneum similar to CG9650-PB, isoform B (LOC664174), mRNA Length = 2496 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 tcgtctgcttcctcttcttcttca 239 |||||| ||||||||||||||||| Sbjct: 1691 tcgtcttcttcctcttcttcttca 1668
>gb|AC096629.11| Bos taurus clone rp42-152a4, complete sequence Length = 191756 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ggatcctccccgtgctcctc 171 |||||||||||||||||||| Sbjct: 9384 ggatcctccccgtgctcctc 9403
>ref|NM_129149.3| Arabidopsis thaliana unknown protein (AT2G35900) mRNA, complete cds Length = 898 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 gtcgtctgcttcctcttcttcttc 238 |||||||||||| ||||||||||| Sbjct: 698 gtcgtctgcttcttcttcttcttc 721
>gb|AC117547.19| Mus musculus chromosome 1, clone RP23-221M20, complete sequence Length = 195598 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 5242 tctgcttcctcttcttcttc 5261
>gb|AC163218.5| Mus musculus chromosome 7, clone RP24-102H24, complete sequence Length = 194207 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 94126 tctgcttcctcttcttcttc 94145
>gb|AC163664.3| Mus musculus BAC clone RP23-310P18 from chromosome 14, complete sequence Length = 221930 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ttcctcttcttcttcaggca 243 |||||||||||||||||||| Sbjct: 221842 ttcctcttcttcttcaggca 221823
>gb|AC092858.21| Bos taurus clone rp42-147e22, complete sequence Length = 165590 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ggatcctccccgtgctcctc 171 |||||||||||||||||||| Sbjct: 60550 ggatcctccccgtgctcctc 60569
>gb|AC098686.11| Bos taurus clone rp42-146c17, complete sequence Length = 164686 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ggatcctccccgtgctcctc 171 |||||||||||||||||||| Sbjct: 112149 ggatcctccccgtgctcctc 112130
>gb|DQ087454.1| Lineus viridis elongation factor 1 alpha mRNA, partial cds Length = 1233 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 cgccgtgctccagccgagca 94 |||||||||||||||||||| Sbjct: 1155 cgccgtgctccagccgagca 1174
>gb|AY117350.1| Arabidopsis thaliana unknown protein (At2g35900) mRNA, complete cds Length = 610 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 gtcgtctgcttcctcttcttcttc 238 |||||||||||| ||||||||||| Sbjct: 585 gtcgtctgcttcttcttcttcttc 608
>gb|AC113115.17| Mus musculus chromosome 7, clone RP23-338L5, complete sequence Length = 197397 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 155057 tctgcttcctcttcttcttc 155076
>gb|AY065283.1| Arabidopsis thaliana unknown protein (At2g35900) mRNA, complete cds Length = 908 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 gtcgtctgcttcctcttcttcttc 238 |||||||||||| ||||||||||| Sbjct: 697 gtcgtctgcttcttcttcttcttc 720
>emb|CR936412.13| Zebrafish DNA sequence from clone DKEY-181M21 in linkage group 18, complete sequence Length = 151872 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 57732 tctgcttcctcttcttcttc 57713
>gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 map g6825, complete sequence Length = 120938 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 gtcgtctgcttcctcttcttcttc 238 |||||||||||| ||||||||||| Sbjct: 86831 gtcgtctgcttcttcttcttcttc 86854
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ccacctcgcctcgccgccgc 37 |||||||||||||||||||| Sbjct: 18132809 ccacctcgcctcgccgccgc 18132790 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ccacctcgcctcgccgccgc 37 |||||||||||||||||||| Sbjct: 18132859 ccacctcgcctcgccgccgc 18132840
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ccacctcgcctcgccgccgc 37 |||||||||||||||||||| Sbjct: 22911698 ccacctcgcctcgccgccgc 22911679
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 tcgtctgcttcctcttcttcttca 239 |||| ||||||||||||||||||| Sbjct: 12042678 tcgtttgcttcctcttcttcttca 12042701
>ref|XM_702670.1| PREDICTED: Danio rerio similar to mitogen-activated protein kinase 8 interacting protein 2 isoform 3, transcript variant 2 (LOC561262), mRNA Length = 1344 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 296 tctgcttcctcttcttcttc 277
>gb|DQ108675.1| Arabidopsis thaliana clone 103892 mRNA sequence Length = 422 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 305 tctgcttcctcttcttcttc 286
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 agccgagcagcagctcgggc 105 |||||||||||||||||||| Sbjct: 347008 agccgagcagcagctcgggc 347027
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14, complete sequence Length = 175698 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 21056 tctgcttcctcttcttcttc 21075
>ref|NM_001012871.1| Gallus gallus abhydrolase domain containing 12 (ABHD12), mRNA emb|AJ720754.1| Gallus gallus mRNA for hypothetical protein, clone 24m17 Length = 3163 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 cccatttctccctccacctc 24 |||||||||||||||||||| Sbjct: 2367 cccatttctccctccacctc 2386
>dbj|AP006169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0026C08 Length = 155316 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ccacctcgcctcgccgccgc 37 |||||||||||||||||||| Sbjct: 125931 ccacctcgcctcgccgccgc 125912 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ccacctcgcctcgccgccgc 37 |||||||||||||||||||| Sbjct: 125981 ccacctcgcctcgccgccgc 125962
>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502H06 Length = 165630 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ccacctcgcctcgccgccgc 37 |||||||||||||||||||| Sbjct: 86520 ccacctcgcctcgccgccgc 86501
>dbj|AP005743.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0543C11 Length = 159075 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 tcgtctgcttcctcttcttcttca 239 |||| ||||||||||||||||||| Sbjct: 139956 tcgtttgcttcctcttcttcttca 139979
>gb|AC013457.7| Homo sapiens BAC clone RP11-77A13 from 2, complete sequence Length = 145242 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctgcttcctcttcttcttca 239 |||||||||||||||||||| Sbjct: 81767 ctgcttcctcttcttcttca 81748
>dbj|AK121979.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108K14, full insert sequence Length = 1547 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 1038 tctgcttcctcttcttcttc 1019
>dbj|AK109612.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-G07, full insert sequence Length = 1853 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 gacgtcgtctgcttcctcttcttc 235 ||||||||| |||||||||||||| Sbjct: 916 gacgtcgtcggcttcctcttcttc 893
>emb|BX819426.1|CNS0A9WK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB76ZG12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 802 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 gtcgtctgcttcctcttcttcttc 238 |||||||||||| ||||||||||| Sbjct: 607 gtcgtctgcttcttcttcttcttc 630
>emb|BX469898.9| Zebrafish DNA sequence from clone DKEY-180H12 in linkage group 18, complete sequence Length = 185729 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 128394 tctgcttcctcttcttcttc 128413
>gb|AC164373.4| Mus musculus chromosome 1, clone RP23-36O22, complete sequence Length = 171278 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 116901 tctgcttcctcttcttcttc 116920
>gb|AC152984.2| Mus musculus 6 BAC RP23-462B3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185001 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 82585 tctgcttcctcttcttcttc 82604
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124605 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 212 gacgtcgtctgcttcctcttcttc 235 ||||||||| |||||||||||||| Sbjct: 35478 gacgtcgtcggcttcctcttcttc 35501
>emb|AL844846.11| Mouse DNA sequence from clone RP23-358I19 on chromosome 2, complete sequence Length = 209013 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 86132 tctgcttcctcttcttcttc 86113
>gb|AC136376.3| Mus musculus BAC clone RP23-243M12 from 14, complete sequence Length = 197646 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ttcctcttcttcttcaggca 243 |||||||||||||||||||| Sbjct: 68243 ttcctcttcttcttcaggca 68224
>gb|AF002846.1|AF002846 Melipona bicolor microsatellite sequence Mbi278AAG Length = 385 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 tctgcttcctcttcttcttc 238 |||||||||||||||||||| Sbjct: 309 tctgcttcctcttcttcttc 328
>emb|AL807811.9| Mouse DNA sequence from clone RP23-247I1 on chromosome 4, complete sequence Length = 249021 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 gtcgtctgcttcctcttcttcttc 238 ||||||| |||||||||||||||| Sbjct: 60560 gtcgtcttcttcctcttcttcttc 60583
>gb|AC092470.9| Homo sapiens 12 BAC RP11-72J9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 96100 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 cagtcagctgacgtgggagt 379 |||||||||||||||||||| Sbjct: 86543 cagtcagctgacgtgggagt 86524 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 87,126,634 Number of extensions: 5374278 Number of successful extensions: 127232 Number of sequences better than 10.0: 79 Number of HSP's gapped: 127227 Number of HSP's successfully gapped: 86 Length of query: 628 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 606 Effective length of database: 18,508,616,841 Effective search space: 11216221805646 Effective search space used: 11216221805646 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)