ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf180f24 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os01g55510:12001.t04962:unspliced-genomic dynein light chain LC6, flagellar outer arm, putative, expressed| Length = 902 Score = 105 bits (224), Expect(2) = 8e-45 Identities = 40/50 (80%), Positives = 43/50 (86%) Frame = +1 / +2 Query: 268 KEFDTAHGPGWQCVVGCSFGCYFTHSKGSFIYFKLESLRFLVFKGMSDDQ 417 +EFD HGPGWQCVVG SFGCYFTHSKGSFIYFKL +LRFLVFKG + Q Sbjct: 392 QEFDMIHGPGWQCVVGASFGCYFTHSKGSFIYFKLGALRFLVFKGAAS*Q 541 Score = 97.7 bits (207), Expect(2) = 8e-45 Identities = 42/55 (76%), Positives = 46/55 (83%) Frame = +1 / +1 Query: 106 QREGTGASRMLEGKATVEDTDMPAKMQLQATSAASRALDRFDVLDCRSIAAHIKK 270 ++E + MLEGKA VEDTDMP KMQLQA SAA +ALDRFDVLDCRSIAAHIKK Sbjct: 46 RKESQETTTMLEGKAMVEDTDMPVKMQLQAMSAAYKALDRFDVLDCRSIAAHIKK 210 Score = 92.7 bits (196), Expect(2) = 6e-39 Identities = 37/44 (84%), Positives = 38/44 (86%) Frame = -1 / -3 Query: 401 PLKTRNLSDSSLKYMKLPLLCVK*HPKLQPTTHCHPGPWAVSNS 270 PLKTRNLS SLK MKLPLLCVK* PKL PTTHCHPGPW +SNS Sbjct: 525 PLKTRNLSAPSLK*MKLPLLCVK*QPKLAPTTHCHPGPWIMSNS 394 Score = 90.9 bits (192), Expect(2) = 6e-39 Identities = 41/68 (60%), Positives = 49/68 (72%) Frame = -1 / -1 Query: 272 SFLMCAAMLRQSRTSKRSRALEAADVACSCILAGMSVSSTVAFPSSILLAPVPSLCCC*K 93 +FLM AAMLRQSRTSKRSRAL AAD+ACSCI GMSVSST+AFPS++++ S Sbjct: 212 TFLM*AAMLRQSRTSKRSRALYAADIACSCIFTGMSVSSTIAFPSNMVVVSCDSFLPSLL 33 Query: 92 LCSHAPHC 69 C+ C Sbjct: 32 CCNARNEC 9 Score = 72.5 bits (152), Expect(2) = 2e-12 Identities = 32/44 (72%), Positives = 36/44 (81%) Frame = +3 / +1 Query: 270 GVRHGPWPGVAVRGRLQLRMLLHAQQGELHILQARVAQVPRLQR 401 GV H P G+AVRG QLR+LLHAQQG+LH+LQA AQVPRLQR Sbjct: 394 GV*HDPRAGMAVRGGRQLRLLLHAQQGKLHLLQAGGAQVPRLQR 525 Score = 21.7 bits (41), Expect(2) = 2e-12 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = +3 / +3 Query: 246 EHRGAHQEG 272 EHR +HQEG Sbjct: 186 EHRRSHQEG 212 Score = 41.8 bits (85), Expect(2) = 2e-08 Identities = 19/29 (65%), Positives = 22/29 (75%) Frame = -3 / -2 Query: 354 APLAVREVASEAAADHALPPRAMGRVELL 268 A LAVREVA+EA A HALP R + V+LL Sbjct: 478 ASLAVREVAAEAGAHHALPSRPVDHVKLL 392 Score = 39.1 bits (79), Expect(2) = 2e-08 Identities = 17/19 (89%), Positives = 17/19 (89%) Frame = -3 / -3 Query: 270 LLDVRRDAPAVEDVEAVEG 214 LLDV DAPAVEDVEAVEG Sbjct: 210 LLDVSGDAPAVEDVEAVEG 154
>LOC_Os02g16909:12002.t005604:unspliced-genomic dynein light chain LC6, flagellar outer arm, putative, expressed| Length = 1578 Score = 87.7 bits (185), Expect(2) = 7e-35 Identities = 38/48 (79%), Positives = 41/48 (85%) Frame = +1 / +1 Query: 124 ASRMLEGKATVEDTDMPAKMQLQATSAASRALDRFDVLDCRSIAAHIK 267 A+ MLEGKA VEDTDMPA+MQ ATSAASRALD FDV DCR+IA HIK Sbjct: 706 AAIMLEGKARVEDTDMPARMQAAATSAASRALDLFDVADCRAIAGHIK 849 Score = 83.1 bits (175), Expect(2) = 7e-35 Identities = 29/44 (65%), Positives = 36/44 (81%) Frame = +1 / +1 Query: 268 KEFDTAHGPGWQCVVGCSFGCYFTHSKGSFIYFKLESLRFLVFK 399 +EFD +G GWQCVVG +FGC+FTH+ G+FIYF LE L FL+FK Sbjct: 979 QEFDKRYGVGWQCVVGANFGCFFTHTSGTFIYFSLERLSFLLFK 1110 Score = 78.5 bits (165), Expect(2) = 6e-24 Identities = 36/48 (75%), Positives = 39/48 (81%) Frame = -1 / -2 Query: 266 LMCAAMLRQSRTSKRSRALEAADVACSCILAGMSVSSTVAFPSSILLA 123 LMC AM RQS TSKRS A +AADVA +CI AGMSVSST AFPSSI+ A Sbjct: 848 LMCPAMARQSATSKRSSARDAADVAAACIRAGMSVSSTRAFPSSIIAA 705 Score = 55.6 bits (115), Expect(2) = 6e-24 Identities = 24/43 (55%), Positives = 28/43 (65%) Frame = -1 / -2 Query: 398 LKTRNLSDSSLKYMKLPLLCVK*HPKLQPTTHCHPGPWAVSNS 270 LK R S K MK+PL+ VK PK PTTHCHP P+ +SNS Sbjct: 1109 LKRRKERRSREK*MKVPLVWVKKQPKFAPTTHCHPTPYLLSNS 981 Score = 44.1 bits (90), Expect = 0.001 Identities = 21/43 (48%), Positives = 26/43 (60%) Frame = +3 / +3 Query: 270 GVRHGPWPGVAVRGRLQLRMLLHAQQGELHILQARVAQVPRLQ 398 GVR GVA+RG +LR+LLH Q LH+L R +P LQ Sbjct: 981 GVRQEVRGGVAMRGGRKLRLLLHPHQRHLHLLLPRAPLLPPLQ 1109 Score = 30.9 bits (61), Expect(2) = 0.28 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -3 / -1 Query: 342 VREVASEAAADHALPPRAMGRVELL 268 V E A+E A HALPP + VELL Sbjct: 1053 VGEEAAEVCAHHALPPHPVPLVELL 979 Score = 25.8 bits (50), Expect(2) = 0.28 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = -3 / -1 Query: 267 LDVRRDAPAVEDVEAVEGP 211 LDV D AV DVE VE P Sbjct: 849 LDVSGDGAAVGDVEEVERP 793
>LOC_Os01g37490:12001.t03291:unspliced-genomic microtubule motor, putative, expressed| Length = 1541 Score = 66.6 bits (139), Expect(2) = 1e-12 Identities = 20/46 (43%), Positives = 34/46 (73%) Frame = +1 / +1 Query: 262 IKKEFDTAHGPGWQCVVGCSFGCYFTHSKGSFIYFKLESLRFLVFK 399 I++EFD +GP W C+VG S+G + TH++G F+YF ++ + ++FK Sbjct: 1108 IQQEFDKVYGPTWHCIVGTSYGSFVTHARGCFLYFSMDKIIVMLFK 1245 Score = 29.0 bits (57), Expect(2) = 1e-12 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = +1 / +2 Query: 166 DMPAKMQLQATSAASRALDRFDVLDCRSIAAHIKK 270 DM MQL A A R+ D D R +A +KK Sbjct: 647 DMSPFMQLHAFRCAKRSHDSLDKFSSRQLAHDVKK 751 Score = 37.7 bits (76), Expect = 0.086 Identities = 16/29 (55%), Positives = 17/29 (58%) Frame = -1 / -1 Query: 356 KLPLLCVK*HPKLQPTTHCHPGPWAVSNS 270 K PL CV P L PT CH GP +SNS Sbjct: 1202 KQPLACVTKEP*LVPTMQCHVGP*TLSNS 1116
>LOC_Os02g50020:12002.t04586:unspliced-genomic hypothetical protein| Length = 2203 Score = 73.5 bits (154), Expect = 2e-12 Identities = 24/50 (48%), Positives = 36/50 (72%) Frame = +1 / +2 Query: 268 KEFDTAHGPGWQCVVGCSFGCYFTHSKGSFIYFKLESLRFLVFKGMSDDQ 417 +EFDTA+GP W C+VG SFG Y TH++G F+YF ++ + L+F+ + Q Sbjct: 1955 QEFDTAYGPAWHCIVGTSFGSYVTHARGGFLYFSVDKVYILLFRTAVEPQ 2104 Score = 44.1 bits (90), Expect = 0.001 Identities = 23/53 (43%), Positives = 25/53 (47%) Frame = -1 / -2 Query: 428 SGCSWSSDMPLKTRNLSDSSLKYMKLPLLCVK*HPKLQPTTHCHPGPWAVSNS 270 S C W S L + S+ KY P V PKL PT C GP AVSNS Sbjct: 2115 SQCGWGSTAVLNNSI*TLSTEKYKNPPRAWVTYEPKLVPTMQCQAGP*AVSNS 1957
>LOC_Os04g38880:12004.t03458:unspliced-genomic microtubule motor, putative, expressed| Length = 2613 Score = 72.1 bits (151), Expect = 4e-12 Identities = 24/44 (54%), Positives = 32/44 (72%) Frame = +1 / +3 Query: 268 KEFDTAHGPGWQCVVGCSFGCYFTHSKGSFIYFKLESLRFLVFK 399 +EFDT +GP W C+VG SFG Y THS G F+YF ++ L L+F+ Sbjct: 2184 QEFDTTYGPAWHCIVGTSFGSYVTHSLGGFLYFSVDKLYILLFR 2315 Score = 44.1 bits (90), Expect = 0.001 Identities = 22/43 (51%), Positives = 25/43 (58%) Frame = -1 / -3 Query: 398 LKTRNLSDSSLKYMKLPLLCVK*HPKLQPTTHCHPGPWAVSNS 270 LK R + S+ KY K P V * PKL PT C GP+ VSNS Sbjct: 2314 LKRRMYNLSTEKYKKPPKE*VT*EPKLVPTMQCQAGPYVVSNS 2186
>LOC_Os02g36990:12002.t03337:unspliced-genomic microtubule motor, putative, expressed| Length = 3966 Score = 66.1 bits (138), Expect = 2e-10 Identities = 21/44 (47%), Positives = 30/44 (68%) Frame = +1 / +2 Query: 268 KEFDTAHGPGWQCVVGCSFGCYFTHSKGSFIYFKLESLRFLVFK 399 +EFD +GP W C+VG FG Y THS G F+YF ++ + L+F+ Sbjct: 3455 QEFDATYGPAWHCIVGTGFGSYVTHSVGGFLYFSVDKVYVLLFR 3586 Score = 40.0 bits (81), Expect = 0.018 Identities = 20/43 (46%), Positives = 23/43 (53%) Frame = -1 / -1 Query: 398 LKTRNLSDSSLKYMKLPLLCVK*HPKLQPTTHCHPGPWAVSNS 270 LK R + S+ KY K P V * PK PT C GP+ SNS Sbjct: 3585 LKRRT*TLSTEKYKKPPTEWVT*EPKPVPTMQCQAGPYVASNS 3457
>LOC_Os01g15260:12001.t01377:unspliced-genomic dynein light chain LC6, flagellar outer arm, putative, expressed| Length = 3968 Score = 49.2 bits (101), Expect(2) = 1e-07 Identities = 17/28 (60%), Positives = 21/28 (75%) Frame = +1 / +2 Query: 244 RSIAAHIKKEFDTAHGPGWQCVVGCSFG 327 + IA +IKKEFD HGP W C+VG +FG Sbjct: 536 KDIAEYIKKEFDKNHGPTWHCIVGRNFG 619 Score = 30.9 bits (61), Expect(2) = 1e-07 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = +1 / +2 Query: 325 GCYFTHSKGSFIYFKLESLRFLVFK 399 G Y TH F+YF ++S L+FK Sbjct: 3497 GSYVTHETNYFVYFYIDSKAVLLFK 3571 Score = 46.4 bits (95), Expect = 2e-04 Identities = 17/26 (65%), Positives = 20/26 (76%) Frame = -1 / -3 Query: 326 PKLQPTTHCHPGPWAVSNSFLMCAAM 249 PKL+PT C GPW +SNSFLM +AM Sbjct: 618 PKLRPTMQCQVGPWFLSNSFLMYSAM 541 Score = 40.5 bits (82), Expect = 0.013 Identities = 19/30 (63%), Positives = 23/30 (76%) Frame = -3 / -2 Query: 339 REVASEAAADHALPPRAMGRVELLLDVRRD 250 RE ++E AAD A+P RA+ VELLLDV RD Sbjct: 631 RERSTEVAADDAVPGRAVVLVELLLDVLRD 542 Score = 38.6 bits (78), Expect = 0.046 Identities = 16/26 (61%), Positives = 18/26 (69%) Frame = +3 / +1 Query: 249 HRGAHQEGVRHGPWPGVAVRGRLQLR 326 HRG HQEGVR P P +A+ R QLR Sbjct: 541 HRGVHQEGVRQEPRPYLALHRRPQLR 618
>LOC_Os06g29690:12006.t02673:unspliced-genomic microtubule motor, putative, expressed| Length = 1780 Score = 40.0 bits (81), Expect = 0.018 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = +1 / +2 Query: 268 KEFDTAHGPGWQCVVGCSFG 327 KEFD HGP W C+VG +FG Sbjct: 404 KEFDKNHGPTWHCIVGHNFG 463 Score = 35.4 bits (71), Expect = 0.42 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -1 / -2 Query: 326 PKLQPTTHCHPGPWAVSNSFL 264 PKL PT C GPW +SNS + Sbjct: 462 PKLWPTMQCQVGPWFLSNSLM 400
>LOC_Os03g17980:12003.t01572:unspliced-genomic carbon catabolite derepressing protein kinase, putative, expressed| Length = 5638 Score = 35.4 bits (71), Expect = 0.42 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -3 / -1 Query: 681 QFICIHLNQSGTSCLKINSTNPTHSESFR 595 QFIC+H+ S C +I++ P H+ S R Sbjct: 4000 QFICLHIPHSAVYCAEIHTHGPFHNPSLR 3914
>LOC_Os06g03970:12006.t00288:unspliced-genomic receptor-like protein kinase 5 precursor, putative, expressed| Length = 6950 Score = 29.5 bits (58), Expect(2) = 0.42 Identities = 9/28 (32%), Positives = 15/28 (53%) Frame = -1 / +3 Query: 506 PRNHRVANTAVKSGEQQIRDQHGGRGSG 423 P H + ++ ++ R+ HGGRG G Sbjct: 141 PTKHHCSPPSIDQSSEKERESHGGRGGG 224 Score = 28.6 bits (56), Expect(2) = 0.42 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -1 / +1 Query: 365 KYMKLPLLCVK*HPKLQPTTH 303 K +L LLC K HP +PT H Sbjct: 6226 KAFQLALLCTKRHPSDRPTMH 6288
>LOC_Os06g28860:12006.t02590:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1760 Score = 26.7 bits (52), Expect(2) = 0.89 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = -1 / -1 Query: 209 EAADVACSCILAGMSVSSTVAFPSSILLAPV 117 EAA VAC+ ++A + ++ PS+ L P+ Sbjct: 95 EAASVACALLVASLGTAAARRTPSTPPLPPL 3 Score = 24.9 bits (48), Expect(2) = 0.89 Identities = 7/14 (50%), Positives = 9/14 (64%) Frame = -1 / -2 Query: 329 HPKLQPTTHCHPGP 288 HP+ + HCHP P Sbjct: 130 HPRPKRRCHCHPKP 89
>LOC_Os08g17410:12008.t01611:unspliced-genomic BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed| Length = 3129 Score = 34.1 bits (68), Expect = 1.1 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -1 / -1 Query: 446 QHGGRGSGCSWSSDMPLKTRNLSDS 372 +HGGR GCS + MP+ +R L S Sbjct: 2295 RHGGRSEGCSHGAGMPVPSRRLMQS 2221
>LOC_Os04g57080:12004.t05175:unspliced-genomic jasmonate O-methyltransferase, putative| Length = 2131 Score = 34.1 bits (68), Expect = 1.1 Identities = 15/54 (27%), Positives = 25/54 (46%) Frame = -1 / -1 Query: 452 RDQHGGRGSGCSWSSDMPLKTRNLSDSSLKYMKLPLLCVK*HPKLQPTTHCHPG 291 + G S SWSS M L++ + S++ + +LC + P+ C PG Sbjct: 478 KQNSGSAASPSSWSSKMQLRSFLVMCSTIASATMSVLCPQEQPRSAAVRRCFPG 317
>LOC_Os03g51150:12003.t04444:unspliced-genomic expressed protein| Length = 2320 Score = 34.1 bits (68), Expect = 1.1 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = +3 / -2 Query: 312 RLQLRMLLHAQQGELHILQARVAQVPRLQRH 404 R++L H +Q E+H+L+AR A +PR Q H Sbjct: 1125 RVRLLQRRHRRQVEVHVLEARHALLPRRQPH 1033
>LOC_Os12g12370:12012.t01106:unspliced-genomic outer envelope protein, putative, expressed| Length = 4054 Score = 26.7 bits (52), Expect(2) = 1.1 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = -1 / -2 Query: 479 AVKSGEQQIRDQHGGRGSGCSWSSDMPLKTRNL 381 A +SGE QHG G G ++P + R+L Sbjct: 483 AKRSGEVGGAPQHGASGYGVDGDGEVPREERDL 385 Score = 24.4 bits (47), Expect(2) = 1.1 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = -1 / -3 Query: 296 PGPWAVSNSFLMCAAMLRQSRTSKRSRA 213 P PW L +M RQ R ++SRA Sbjct: 347 PTPWWTRTRSLARPSMTRQERRWEKSRA 264
>LOC_Os03g08730:12003.t00729:unspliced-genomic uroporphyrinogen-III synthase, putative, expressed| Length = 4145 Score = 33.6 bits (67), Expect(2) = 1.2 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = +1 / +2 Query: 304 CVVGCSFGCYFTHSKGSFIYFKL 372 C++GC+F C T+S G+ IY +L Sbjct: 2171 CLIGCNFHCMSTNSYGALIY*RL 2239 Score = 22.1 bits (42), Expect(2) = 1.2 Identities = 7/11 (63%), Positives = 7/11 (63%) Frame = +2 / +1 Query: 482 CWLLDDYGGGC 514 CW L D GGC Sbjct: 3877 CWRLVDICGGC 3909
>LOC_Os03g03570:12003.t00239:unspliced-genomic ATP binding protein, putative, expressed| Length = 4864 Score = 33.6 bits (67), Expect = 1.5 Identities = 19/65 (29%), Positives = 29/65 (44%) Frame = -1 / +3 Query: 578 RCKLNQAKVTLAHFSFMPAPASSRPRNHRVANTAVKSGEQQIRDQHGGRGSGCSWSSDMP 399 R +++ T + + PA A S PR+ + A +S + R RGS CS S M Sbjct: 456 RSSPSRSSATASPAASPPASARSAPRSTSSTSAATRSPARSRRSSARSRGSACSTSPTMR 635 Query: 398 LKTRN 384 R+ Sbjct: 636 SPARS 650
>LOC_Os02g53530:12002.t04932:unspliced-genomic zinc finger protein, putative, expressed| Length = 1255 Score = 33.1 bits (66), Expect = 2.1 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +3 / -2 Query: 255 GAHQEGVRHGPWPGVAVRG 311 GA +G+RHG WPG RG Sbjct: 792 GATVDGLRHGTWPGEGARG 736
>LOC_Os10g02180:12010.t00113:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2303 Score = 28.1 bits (55), Expect(2) = 2.3 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = -1 / -1 Query: 413 SSDMPLKTRNLSDSSLKYMKLPLLCVK*HPKLQPTTHCHPG 291 SS PLK N +D++ + K+ LL + + P C PG Sbjct: 1049 SSQDPLKGNNSTDTAFRKSKMLLLKYRREKR*APGQPCTPG 927 Score = 25.8 bits (50), Expect(2) = 2.3 Identities = 15/60 (25%), Positives = 22/60 (36%) Frame = -1 / -2 Query: 578 RCKLNQAKVTLAHFSFMPAPASSRPRNHRVANTAVKSGEQQIRDQHGGRGSGCSWSSDMP 399 RC + + + + S RPR ++ SG + R SG SW S P Sbjct: 1933 RCTFRWGRSSSLGATSLGRSLSKRPRGVHSSSVPTTSGSEDDRRGLPAVASGPSWGSGAP 1754
>LOC_Os06g44590:12006.t04146:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5769 Score = 32.7 bits (65), Expect = 2.8 Identities = 17/60 (28%), Positives = 25/60 (41%) Frame = -1 / -2 Query: 578 RCKLNQAKVTLAHFSFMPAPASSRPRNHRVANTAVKSGEQQIRDQHGGRGSGCSWSSDMP 399 RC + + + +F+ +S RPR A+ SG + R SG SW S P Sbjct: 3827 RCTFRRGRSSSLGAAFLGRSSSKRPRGAHSASVPTTSGSEGDRRGLPAVASGPSWGSGAP 3648
>LOC_Os12g13280:12012.t01196:unspliced-genomic expressed protein| Length = 2981 Score = 28.6 bits (56), Expect(2) = 2.9 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = -1 / -1 Query: 329 HPKLQPTTHCHPGPWAVSNS 270 HP+L P HCH A +NS Sbjct: 1817 HPRLPPLRHCHIRRLAATNS 1758 Score = 25.4 bits (49), Expect(2) = 2.9 Identities = 9/24 (37%), Positives = 14/24 (58%) Frame = -3 / -3 Query: 663 LNQSGTSCLKINSTNPTHSESFRP 592 L + SC+K N+ +P H+ RP Sbjct: 1980 LMERSKSCVKSNAQSPPHTSQPRP 1909
>LOC_Os11g23220:12011.t01991:unspliced-genomic VIIIA, putative, expressed| Length = 1564 Score = 26.3 bits (51), Expect(2) = 2.9 Identities = 12/16 (75%), Positives = 12/16 (75%) Frame = -3 / +1 Query: 351 PLAVREVASEAAADHA 304 PLAV VAS AAA HA Sbjct: 1408 PLAVPAVASAAAASHA 1455 Score = 23.5 bits (45), Expect(2) = 2.9 Identities = 8/18 (44%), Positives = 9/18 (50%) Frame = -1 / +3 Query: 452 RDQHGGRGSGCSWSSDMP 399 R HG R CSW +P Sbjct: 1308 RGGHGNRRRCCSWKIKLP 1361
>LOC_Os06g04900:12006.t00379:unspliced-genomic hexose carrier protein HEX6, putative, expressed| Length = 2009 Score = 29.0 bits (57), Expect(2) = 3.7 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -1 / +1 Query: 245 RQSRTSKRSRALEAADVACSCILAGMSVSSTVAFPSSILLAPVP 114 R + +S R+R+ A +CS A + S T + PSS AP P Sbjct: 766 RPTASSSRARSNAATSSSCSRRSAAPTTSPTSSTPSSRRTAPRP 897 Score = 24.0 bits (46), Expect(2) = 3.7 Identities = 14/49 (28%), Positives = 18/49 (36%) Frame = -2 / +3 Query: 658 SKWNIMLENQFHESNAFREFQTVVANCGAN*IKQKLHWRISASCQHRPA 512 S+W N F S V N G I+ WR+S + PA Sbjct: 582 SRWRGAFSNGFQLSVGVGALAANVINYGTEKIRGGWGWRVSLALAAVPA 728
>LOC_Os12g43590:12012.t04028:unspliced-genomic FAD binding protein, putative, expressed| Length = 5056 Score = 32.2 bits (64), Expect = 3.9 Identities = 21/79 (26%), Positives = 33/79 (41%) Frame = -1 / +1 Query: 314 PTTHCHPGPWAVSNSFLMCAAMLRQSRTSKRSRALEAADVACSCILAGMSVSSTVAFPSS 135 PT+ P S++ AA S TS R+ A AA + + S + P++ Sbjct: 247 PTSPAPAAPSPCSSAVASSAAPPSPSPTSSRASASPAAATSSASSAPP*SSKTPPTHPNT 426 Query: 134 ILLAPVPSLCCC*KLCSHA 78 I + P LC C+H+ Sbjct: 427 ICQSEFPQLCVHMHFCNHS 483
>LOC_Os10g36150:12010.t02900:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3434 Score = 32.2 bits (64), Expect = 3.9 Identities = 16/60 (26%), Positives = 27/60 (45%) Frame = -1 / -2 Query: 578 RCKLNQAKVTLAHFSFMPAPASSRPRNHRVANTAVKSGEQQIRDQHGGRGSGCSWSSDMP 399 RC + +L + + +S +PR +++ + SG + RD SG SW S P Sbjct: 1297 RCTFRWGRSSLLGAASLGHSSSKQPRGAHLSSVLMTSGSEDNRDGLPTVASGPSWGSGAP 1118
>LOC_Os10g36134:12010.t02898:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1313 Score = 32.2 bits (64), Expect = 3.9 Identities = 16/60 (26%), Positives = 27/60 (45%) Frame = -1 / -2 Query: 578 RCKLNQAKVTLAHFSFMPAPASSRPRNHRVANTAVKSGEQQIRDQHGGRGSGCSWSSDMP 399 RC + +L + + +S +PR +++ + SG + RD SG SW S P Sbjct: 754 RCTFRWGRSSLLGAASLGHSSSKQPRGAHLSSVLMTSGSEDNRDGLPTVASGPSWGSGAP 575
>LOC_Os02g25920:12002.t02286:unspliced-genomic expressed protein| Length = 3730 Score = 32.2 bits (64), Expect = 3.9 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = -1 / +3 Query: 494 RVANTAVKSGEQQIRDQHGGRGSGCSW 414 RV + + GE+ + D+HGGR G W Sbjct: 123 RVRDRGKEGGEELLTDEHGGRREGWRW 203
>LOC_Os11g01869:12011.t00084:unspliced-genomic RBP2 protein, putative, expressed| Length = 4562 Score = 31.8 bits (63), Expect = 5.4 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = -1 / +2 Query: 143 PSSILLAPVPSLCCC*KLCSHAPHC 69 PS P+PS C C L H PHC Sbjct: 1454 PSGNPCTPLPSCCRCHLLLLHPPHC 1528
>LOC_Os10g27180:12010.t02124:unspliced-genomic expressed protein| Length = 4714 Score = 31.8 bits (63), Expect = 5.4 Identities = 11/37 (29%), Positives = 23/37 (62%) Frame = -1 / -1 Query: 245 RQSRTSKRSRALEAADVACSCILAGMSVSSTVAFPSS 135 RQ++ ++RSR E ++ +CSC + S++ A ++ Sbjct: 145 RQAKLTRRSRCSETSERSCSCSCGSAAASASAAIAAA 35
>LOC_Os05g24670:12005.t02124:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2153 Score = 31.8 bits (63), Expect = 5.4 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = -1 / +3 Query: 494 RVANTAVKSGEQQIRDQHGGRGSGCSW 414 R+ + K GE+ + +HGGRG G W Sbjct: 24 RMRDRGKKGGEELLTGKHGGRGEG*RW 104
>LOC_Os05g24460:12005.t02103:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6157 Score = 31.8 bits (63), Expect = 5.4 Identities = 16/60 (26%), Positives = 26/60 (43%) Frame = -1 / -2 Query: 578 RCKLNQAKVTLAHFSFMPAPASSRPRNHRVANTAVKSGEQQIRDQHGGRGSGCSWSSDMP 399 RC + + + + +S RPR R ++ + SG + R SG SW S+ P Sbjct: 4020 RCTFRRGRSPSLGATSLGRSSSKRPRGARSSSVSTTSGSEDDRGGLPTVASGPSWGSEAP 3841
>LOC_Os04g01910:12004.t00088:unspliced-genomic legume lectins beta domain containing protein, expressed| Length = 1343 Score = 31.8 bits (63), Expect = 5.4 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = -2 / +2 Query: 547 WRISASCQHRPAAAPVIIE*PTRPLNPGSSRS 452 WR +A+ +HRP AAP PT P SRS Sbjct: 422 WRATAAFRHRPTAAP*RRPTPTPPAASPPSRS 517
>LOC_Os03g14920:12003.t01278:unspliced-genomic hypothetical protein| Length = 1261 Score = 31.8 bits (63), Expect = 5.4 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +3 / -1 Query: 246 EHRGAHQEGVRHGPWPGVAVRGR 314 + RG HQ+GV H P GV R R Sbjct: 892 DRRGRHQDGVHHAPQAGVPGRRR 824
>LOC_Os05g35050:12005.t03098:unspliced-genomic copper transporter 1, putative, expressed| Length = 873 Score = 25.8 bits (50), Expect(2) = 5.5 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +3 / +2 Query: 354 LHILQARVAQVPRLQRHVG*PR 419 LH+ R +VPRL R G PR Sbjct: 233 LHVRAGRAPRVPRLPRAGGAPR 298 Score = 23.1 bits (44), Expect(2) = 5.5 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +3 / +3 Query: 456 LLLPGFNGRVGYSMITGAAAG 518 L L FNG V +++ G AAG Sbjct: 381 LALMSFNGGVFLAIVAGHAAG 443
>LOC_Os01g18160:12001.t01611:unspliced-genomic hypothetical protein| Length = 366 Score = 26.7 bits (52), Expect(2) = 5.9 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +3 / +1 Query: 345 QGELHILQARVAQVPRLQRHVG 410 +GE+ +L A A+ R RHVG Sbjct: 202 EGEMSVLLAAAAEYARRMRHVG 267 Score = 22.1 bits (42), Expect(2) = 5.9 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = +3 / +3 Query: 255 GAHQEGVRHGPWPGVAVRGR 314 G+ G R GP PGV R R Sbjct: 144 GSAGSGRRRGPRPGVRRRRR 203
>LOC_Os07g10580:12007.t00932:unspliced-genomic prolamin precursor, putative, expressed| Length = 694 Score = 28.6 bits (56), Expect(2) = 6.2 Identities = 16/34 (47%), Positives = 18/34 (52%) Frame = -2 / -3 Query: 562 KQKLHWRISASCQHRPAAAPVIIE*PTRPLNPGS 461 K +L S QHRPAAA V + P R PGS Sbjct: 434 KLELELESDQSRQHRPAAAVVAAQSPERY*WPGS 333 Score = 22.1 bits (42), Expect(2) = 6.2 Identities = 6/16 (37%), Positives = 10/16 (62%) Frame = -1 / -2 Query: 113 SLCCC*KLCSHAPHCM 66 S CCC + C + +C+ Sbjct: 189 STCCCSRRCDCS*YCL 142
>LOC_Os11g05210:12011.t00414:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6929 Score = 31.3 bits (62), Expect = 7.4 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = -1 / -3 Query: 416 WSSDMPLKTRNLSDSSLKYMKLPLLCV 336 WS P+KTRN+S L + P + V Sbjct: 4500 WSKKFPIKTRNISFQGLNPLNFPFILV 4420
>LOC_Os10g39270:12010.t03168:unspliced-genomic nucleoid DNA-binding-like protein, putative| Length = 1194 Score = 31.3 bits (62), Expect = 7.4 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -1 / -1 Query: 509 RPRNHRVANTAVKSGEQQIRDQHGGRGSG 423 R +HR AN V + EQ +R +H RG+G Sbjct: 1062 RDAHHRQANRVVPNVEQVVRRRHRQRGAG 976
>LOC_Os07g45410:12007.t04179:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 9379 Score = 31.3 bits (62), Expect = 7.4 Identities = 17/38 (44%), Positives = 20/38 (52%) Frame = -3 / +3 Query: 354 APLAVREVASEAAADHALPPRAMGRVELLLDVRRDAPA 241 +PLAV A A HA P RA+G V + R APA Sbjct: 4551 SPLAVGVAAVGVVAAHARPSRAVGLVAAASLLARPAPA 4664
>LOC_Os07g36940:12007.t03363:unspliced-genomic eukaryotic translation initiation factor 4G, putative, expressed| Length = 8169 Score = 31.3 bits (62), Expect = 7.4 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = -1 / -1 Query: 635 KSIPRIQRIQRVSDRSRELRCKLNQAKVTLAHFSFMPAPA 516 + I R +R QR +S RC+L +V LAH +PA A Sbjct: 741 RRILRCRRAQRRRLQSGRGRCRLEAVRVGLAHSPLVPAMA 622
>LOC_Os07g33840:12007.t03061:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1675 Score = 31.3 bits (62), Expect = 7.4 Identities = 20/75 (26%), Positives = 29/75 (38%) Frame = -1 / +3 Query: 623 RIQRIQRVSDRSRELRCKLNQAKVTLAHFSFMPAPASSRPRNHRVANTAVKSGEQQIRDQ 444 R+ +R S RC + + + + +F S RPR A+ SG + R Sbjct: 1155 RVSASRRASLTK*TGRCTFRRGRSSSSGATFPGRSPSERPRGAHSASVPTTSGSEGDRRG 1334 Query: 443 HGGRGSGCSWSSDMP 399 SG SW S P Sbjct: 1335 LPAVASGPSWGSGAP 1379
>LOC_Os06g41190:12006.t03813:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 1284 Score = 31.3 bits (62), Expect = 7.4 Identities = 17/38 (44%), Positives = 20/38 (52%) Frame = -3 / +2 Query: 354 APLAVREVASEAAADHALPPRAMGRVELLLDVRRDAPA 241 +PLAV A A HA P RA+G V + R APA Sbjct: 737 SPLAVGVAAVGVVAAHARPSRAVGLVAAASLLARPAPA 850
>LOC_Os06g28160:12006.t02520:unspliced-genomic conserved hypothetical protein| Length = 3709 Score = 31.3 bits (62), Expect = 7.4 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = -1 / +3 Query: 152 VAFPSSILLAPVPSLCCC 99 V FPS +LL P+P L CC Sbjct: 1032 VKFPSYVLLTPLPLLYCC 1085
>LOC_Os05g49940:12005.t04427:unspliced-genomic expressed protein| Length = 780 Score = 31.3 bits (62), Expect = 7.4 Identities = 12/36 (33%), Positives = 16/36 (44%) Frame = -1 / +1 Query: 530 MPAPASSRPRNHRVANTAVKSGEQQIRDQHGGRGSG 423 +PA A HR A G +++ HGG G G Sbjct: 256 VPAVARQLAGEHRAGEPAAAVGSPEVQQHHGGGGGG 363
>LOC_Os04g58780:12004.t05339:unspliced-genomic nucleic acid binding protein, putative, expressed| Length = 11500 Score = 31.3 bits (62), Expect = 7.4 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +1 / -2 Query: 289 GPGWQCVVGCSFGCYFTHSKGSFIYFKLE 375 G GW V SF C +TH G Y KL+ Sbjct: 8088 GCGW*LVTWYSFTCIYTHIYGIGFYIKLD 8002
>LOC_Os04g54080:12004.t04881:unspliced-genomic serine/threonine-protein kinase receptor precursor, putative,| expressed Length = 4566 Score = 31.3 bits (62), Expect = 7.4 Identities = 10/22 (45%), Positives = 10/22 (45%) Frame = -1 / -3 Query: 107 CCC*KLCSHAPHCMIGWGQGMA 42 CCC LC HC W MA Sbjct: 1957 CCCHMLCRTPTHCQAQWSGNMA 1892
>LOC_Os03g25550:12003.t02252:unspliced-genomic myb-like DNA-binding domain containing protein| Length = 1405 Score = 31.3 bits (62), Expect = 7.4 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = -1 / -2 Query: 194 ACSCILAGMSVSSTVAFPSSILLAPVPSLCCC 99 A + AG SS + PS+ +AP CCC Sbjct: 915 AAAAAAAGQ*SSSGILMPSTSCIAPTSGACCC 820
>LOC_Os02g29510:12002.t02644:unspliced-genomic non-imprinted in Prader-Willi/Angelman syndrome region protein 1,| putative, expressed Length = 11896 Score = 31.3 bits (62), Expect = 7.4 Identities = 17/38 (44%), Positives = 20/38 (52%) Frame = -3 / +2 Query: 354 APLAVREVASEAAADHALPPRAMGRVELLLDVRRDAPA 241 +PLAV A A HA P RA+G V + R APA Sbjct: 3245 SPLAVGVAAVGVVAAHARPSRAVGLVAAASLLARPAPA 3358
>LOC_Os01g01390:12001.t00038:unspliced-genomic expressed protein| Length = 3157 Score = 31.3 bits (62), Expect = 7.4 Identities = 13/58 (22%), Positives = 25/58 (43%) Frame = -1 / +1 Query: 245 RQSRTSKRSRALEAADVACSCILAGMSVSSTVAFPSSILLAPVPSLCCC*KLCSHAPH 72 ++ + + R ++ C+C S S +++ + P S CCC + S PH Sbjct: 37 KEKKKNTRVCSVGCVSAPCACAALRRSPSPSLSLSRAEQSTPSSSSCCCFRQVSEHPH 210
>LOC_Os02g53130:12002.t04892:unspliced-genomic nitrate reductase, putative, expressed| Length = 3417 Score = 27.6 bits (54), Expect(2) = 7.8 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +3 / +1 Query: 249 HRGAHQEGVRHGPWP 293 HRG + +R GPWP Sbjct: 2173 HRGIRRHPLRQGPWP 2217 Score = 24.9 bits (48), Expect(2) = 7.8 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +3 / +1 Query: 360 ILQARVAQVPRLQRHVG*P 416 ILQ R QVPR + HV P Sbjct: 2587 ILQGRGPQVPRRRAHVAVP 2643
>LOC_Os05g07680:12005.t00649:unspliced-genomic CENP-E like kinetochore protein, putative, expressed| Length = 5043 Score = 30.4 bits (60), Expect(2) = 8.2 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -1 / +1 Query: 167 SVSSTVAFPSSILLAPVPSLCCC*KLCS 84 SV+ FP S+ L+ +P CCC C+ Sbjct: 4714 SVNGNACFPVSLSLSLLPVACCCSITCA 4797 Score = 22.6 bits (43), Expect(2) = 8.2 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = -1 / +2 Query: 251 MLRQSRTSKRSRALEAADVACSC 183 + R+ S SR +ADV+CSC Sbjct: 2942 LCRKGWGSYYSRTELSADVSCSC 3010
>LOC_Os05g06260:12005.t00516:unspliced-genomic gamma-tubulin complex component 4, putative, expressed| Length = 6651 Score = 24.0 bits (46), Expect(2) = 8.5 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = -1 / +3 Query: 293 GPWAVSNSFLMCAAMLR 243 G W +S +MC+A LR Sbjct: 555 GNWGISRLGMMCSACLR 605 Score = 24.0 bits (46), Expect(2) = 8.5 Identities = 12/35 (34%), Positives = 16/35 (45%) Frame = -1 / +3 Query: 203 ADVACSCILAGMSVSSTVAFPSSILLAPVPSLCCC 99 A V I A + + PSSI+ A P+ CC Sbjct: 621 ASVIV*LIAAAIEFKCALHCPSSIVTAVNPTRACC 725
>LOC_Os05g34230:12005.t03017:unspliced-genomic disease resistance protein RGA3, putative, expressed| Length = 2704 Score = 28.1 bits (55), Expect(2) = 8.6 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -1 / +1 Query: 563 QAKVTLAHFSFMPAPASSRPRNHRVANTA 477 +AK+TLAH PAPA+ P + +++ A Sbjct: 94 RAKLTLAHEMPAPAPAAPWPVSQEISSLA 180 Score = 24.0 bits (46), Expect(2) = 8.6 Identities = 11/31 (35%), Positives = 21/31 (67%) Frame = -1 / +1 Query: 251 MLRQSRTSKRSRALEAADVACSCILAGMSVS 159 MLR +R++ R RAL A+++ + I++ + S Sbjct: 1276 MLRNTRSTWRWRALLDAEISHNIIISSLQHS 1368
>LOC_Os06g19670:12006.t01786:unspliced-genomic F-box domain containing protein| Length = 4420 Score = 24.9 bits (48), Expect(2) = 8.8 Identities = 9/32 (28%), Positives = 17/32 (53%) Frame = -1 / +1 Query: 305 HCHPGPWAVSNSFLMCAAMLRQSRTSKRSRAL 210 HCHPG ++ N + + +T RS+++ Sbjct: 1081 HCHPGASSLPNELVYEILLRLPVKTLSRSKSV 1176 Score = 23.1 bits (44), Expect(2) = 8.8 Identities = 8/12 (66%), Positives = 8/12 (66%) Frame = -1 / +2 Query: 452 RDQHGGRGSGCS 417 R GGRG GCS Sbjct: 1043 RRTRGGRGGGCS 1078
>LOC_Os05g34110:12005.t03006:unspliced-genomic myb-like DNA-binding domain, SHAQKYF class family protein,| expressed Length = 2065 Score = 28.1 bits (55), Expect(2) = 9.1 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = -3 / -2 Query: 354 APLAVREVASEAAADHALPPRAMGRVELLLDVRRDAPAVEDVEA 223 AP S AAA A P A+ +LL+VRR+ A E ++A Sbjct: 564 APAGAGAAPSSAAAAVADPLHALEVEAVLLEVRRNVLAREAIDA 433 Score = 23.5 bits (45), Expect(2) = 9.1 Identities = 9/33 (27%), Positives = 20/33 (60%) Frame = -1 / -3 Query: 542 HFSFMPAPASSRPRNHRVANTAVKSGEQQIRDQ 444 H SF+P+ SS R + ++ ++GE++ ++ Sbjct: 1391 HNSFLPSK*SSSLRLSLIMSSKTRTGEEEEEEE 1293 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 214,653,232 Number of extensions: 3097021 Number of successful extensions: 17519 Number of sequences better than 10.0: 55 Length of query: 234 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 185 Effective length of database: 52,856,264 Effective search space: 9778408840 Effective search space used: 9778408840 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
