ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf180d24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK073484:Os05g0592600 | 31 | 1.9 | 2 | AK058336: | 30 | 2.5 | 3 | AK119901:Os02g0128800 | 30 | 4.2 | 4 | AK111954:Os02g0128800 | 30 | 4.2 | 5 | AK111795:Os02g0128800 | 30 | 4.2 | 6 | AK104468:Os02g0128800 | 30 | 4.2 | 7 | AK071666:Os02g0759800 | 29 | 5.6 | 8 | AK067153:Os02g0759800 | 29 | 5.6 | 9 | Os05g0238200:Os05g0238200 | 28 | 9.5 | 10 | AB110200:Os12g0572400 | 28 | 9.5 | 11 | AK120816:Os01g0234900 | 28 | 9.5 | 12 | AK065531:Os12g0572400 | 28 | 9.5 |
|---|
>AK073484:Os05g0592600 | Length = 1207 Score = 30.8 bits (68), Expect = 1.9 Identities = 13/36 (36%), Positives = 24/36 (66%) Frame = -1 Query: 532 ERYRKEREREGQMQKKQSFRILLGSKKKKRSDCDCM 425 +R +KERE+E ++KKQ ++L G +K++ + M Sbjct: 389 KRRKKEREKEKLLKKKQEGKLLTGKQKEEAKRLEAM 424
>AK058336: | Length = 301 Score = 30.4 bits (67), Expect = 2.5 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +1 Query: 181 CTNTDRYPSTCASSVLSLQFAAAKFSCFSRHFCVAFG*VRLGL 309 CT RY + V + + FSCF ++FC+ F +LG+ Sbjct: 173 CTFNHRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGM 215
>AK119901:Os02g0128800 | Length = 308 Score = 29.6 bits (65), Expect = 4.2 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = +1 Query: 181 CTNTDRYPSTCASSVLSLQFAAAKFSCFSRHFCVAFG*VRLGL 309 CT RY + V + + F CF +HFC+ F LG+ Sbjct: 180 CTFNHRYVKSNPYEVENATWMLTVFKCFGQHFCLHFEAFLLGM 222
>AK111954:Os02g0128800 | Length = 229 Score = 29.6 bits (65), Expect = 4.2 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = +1 Query: 181 CTNTDRYPSTCASSVLSLQFAAAKFSCFSRHFCVAFG*VRLGL 309 CT RY + V + + F CF +HFC+ F LG+ Sbjct: 101 CTFNHRYVKSNPYEVENATWMLTVFKCFGQHFCLHFEAFLLGM 143
>AK111795:Os02g0128800 | Length = 308 Score = 29.6 bits (65), Expect = 4.2 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = +1 Query: 181 CTNTDRYPSTCASSVLSLQFAAAKFSCFSRHFCVAFG*VRLGL 309 CT RY + V + + F CF +HFC+ F LG+ Sbjct: 180 CTFNHRYVKSNPYEVENATWMLTVFKCFGQHFCLHFEAFLLGM 222
>AK104468:Os02g0128800 | Length = 308 Score = 29.6 bits (65), Expect = 4.2 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = +1 Query: 181 CTNTDRYPSTCASSVLSLQFAAAKFSCFSRHFCVAFG*VRLGL 309 CT RY + V + + F CF +HFC+ F LG+ Sbjct: 180 CTFNHRYVKSNPYEVENATWMLTVFKCFGQHFCLHFEAFLLGM 222
>AK071666:Os02g0759800 | Length = 440 Score = 29.3 bits (64), Expect = 5.6 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = -1 Query: 547 KNAITERYRKEREREGQMQKKQSFRILLGSKKKKRSDCD-CMENSVHITISDHQGILRGQ 371 ++ I E R+ERERE +++ + + +G K K D D + + + ++ G G+ Sbjct: 231 RDRIREERRRERERERRLEARDA---AMGKKSKLTRDRDRDVSEKIALGMASTGGAKGGE 287 Query: 370 VRFGERAF 347 V + +R F Sbjct: 288 VMYDQRLF 295
>AK067153:Os02g0759800 | Length = 607 Score = 29.3 bits (64), Expect = 5.6 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = -1 Query: 547 KNAITERYRKEREREGQMQKKQSFRILLGSKKKKRSDCD-CMENSVHITISDHQGILRGQ 371 ++ I E R+ERERE +++ + + +G K K D D + + + ++ G G+ Sbjct: 398 RDRIREERRRERERERRLEARDA---AMGKKSKLTRDRDRDVSEKIALGMASTGGAKGGE 454 Query: 370 VRFGERAF 347 V + +R F Sbjct: 455 VMYDQRLF 462
>Os05g0238200:Os05g0238200 | Length = 361 Score = 28.5 bits (62), Expect = 9.5 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +1 Query: 181 CTNTDRYPSTCASSVLSLQFAAAKFSCFSRHFCVAFG*VRLGL 309 CT RY + V + + F CF ++FC+ F +LG+ Sbjct: 220 CTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGM 262
>AB110200:Os12g0572400 | Length = 232 Score = 28.5 bits (62), Expect = 9.5 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +2 Query: 1028 PRISSYSPRKRRKKLYKATLQSFCMYTTQSSRIKSPDSTQKKKK 1159 PR SYSP RR+ Y A+ + T+S R + + ++KK+ Sbjct: 128 PRSRSYSPAPRRRDDYSASPPRKDTHPTKSPRRQPKEHDEEKKR 171
>AK120816:Os01g0234900 | Length = 347 Score = 28.5 bits (62), Expect = 9.5 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +1 Query: 181 CTNTDRYPSTCASSVLSLQFAAAKFSCFSRHFCVAFG*VRLGL 309 CT RY + V + + F CF ++FC+ F +LG+ Sbjct: 206 CTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGM 248
>AK065531:Os12g0572400 | Length = 263 Score = 28.5 bits (62), Expect = 9.5 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +2 Query: 1028 PRISSYSPRKRRKKLYKATLQSFCMYTTQSSRIKSPDSTQKKKK 1159 PR SYSP RR+ Y A+ + T+S R + + ++KK+ Sbjct: 159 PRSRSYSPAPRRRDDYSASPPRKDTHPTKSPRRQPKEHDEEKKR 202 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 31,705,527 Number of extensions: 684443 Number of successful extensions: 1538 Number of sequences better than 10.0: 12 Number of HSP's gapped: 1535 Number of HSP's successfully gapped: 12 Length of query: 386 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 284 Effective length of database: 11,315,673 Effective search space: 3213651132 Effective search space used: 3213651132 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
