| Clone Name | FLbaf180b05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK242387.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J080051E14, full insert sequence Length = 1448 Score = 601 bits (303), Expect = e-168 Identities = 512/579 (88%), Gaps = 2/579 (0%) Strand = Plus / Plus Query: 1125 caggctcccggtcgtcttgttaccatggtgtgaccaggcataggtggagtgggaaatatg 1184 ||||| ||||||| ||| ||| ||||||||||||||||||||| |||||||| ||||||| Sbjct: 442 caggcacccggtcatctagtttccatggtgtgaccaggcatagatggagtggaaaatatg 501 Query: 1185 aagctcatttgtgggacagtacttgcagagtagaaggacggagaaggaaagggaa-gcaa 1243 |||||||| ||||||||||| | |||||| | ||||| ||||||| ||||||||| |||| Sbjct: 502 aagctcatctgtgggacagttcgtgcagaatggaagggcggagaa-gaaagggaaggcaa 560 Query: 1244 gtttatttaggaagttatgatactgagcaaaaagctgccagggcatatgatgttgcagct 1303 ||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||| Sbjct: 561 gtttatttaggaagttatgataccgaggaaaaagctgccaggtcatatgatgttgcagct 620 Query: 1304 cttaaatactggggactaaatacaaagctgaacttttcgatttcagaatatgaaaaggaa 1363 |||||||||||||| | ||||||||||||||| || ||| |||||||||| |||| |||| Sbjct: 621 cttaaatactggggccaaaatacaaagctgaatttctcggtttcagaatacgaaagggaa 680 Query: 1364 ctggcggacatacaagacatgtctccagaggaatgtgtgacatacttgcgaaggaggagc 1423 |||| ||||||| |||||||||| ||||||||| || |||||| | |||| || || Sbjct: 681 ctggaggacataagggacatgtctcgagaggaatgcgtaacatacctaagaagaagaagt 740 Query: 1424 agctgcttctcaagaggggcttctatttacagaggagttacaaggaggcagaaagatggt 1483 ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| Sbjct: 741 agctgcttctcaagaggggcttctatttatagaggagttactagaaggcagaaagatggg 800 Query: 1484 cgatggcaggcccgcataggactgattgctggaactagagacatttaccttggaactttc 1543 | |||||||| |||||||||||| |||||||||| |||||||||||||| ||||||||| Sbjct: 801 aggtggcaggcacgcataggactggttgctggaacaagagacatttacctgggaactttc 860 Query: 1544 aaaaccgaggaagaagctgcagaagcatatgatattgctgccattgagatacgtgggaaa 1603 ||||| ||||||||||| || || || || || |||||||| |||||||| ||||| ||| Sbjct: 861 aaaactgaggaagaagcagcggaggcttacgacattgctgctattgagatccgtggcaaa 920 Query: 1604 aacgcggtgaccaactttgaccgaagcaactacatggacaggggcatgcattgtatagaa 1663 || ||||||||||||||||| ||||||||||||||||| | ||| ||||| ||||||||| Sbjct: 921 aatgcggtgaccaactttgatcgaagcaactacatggagaagggtatgcactgtatagaa 980 Query: 1664 ggggcagggttgaagctgcttgcaacgaagccagaatga 1702 |||||||| |||||||||||||| | |||||||||||| Sbjct: 981 ggggcaggcttgaagctgcttgcgtctaagccagaatga 1019
>gb|AY685114.1| Oryza sativa (japonica cultivar-group) transcription factor AP2D8 (AP2D8) mRNA, complete cds Length = 1104 Score = 601 bits (303), Expect = e-168 Identities = 512/579 (88%), Gaps = 2/579 (0%) Strand = Plus / Plus Query: 1125 caggctcccggtcgtcttgttaccatggtgtgaccaggcataggtggagtgggaaatatg 1184 ||||| ||||||| ||| ||| ||||||||||||||||||||| |||||||| ||||||| Sbjct: 527 caggcacccggtcatctagtttccatggtgtgaccaggcatagatggagtggaaaatatg 586 Query: 1185 aagctcatttgtgggacagtacttgcagagtagaaggacggagaaggaaagggaa-gcaa 1243 |||||||| ||||||||||| | |||||| | ||||| ||||||| ||||||||| |||| Sbjct: 587 aagctcatctgtgggacagttcgtgcagaatggaagggcggagaa-gaaagggaaggcaa 645 Query: 1244 gtttatttaggaagttatgatactgagcaaaaagctgccagggcatatgatgttgcagct 1303 ||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||| Sbjct: 646 gtttatttaggaagttatgataccgaggaaaaagctgccaggtcatatgatgttgcagct 705 Query: 1304 cttaaatactggggactaaatacaaagctgaacttttcgatttcagaatatgaaaaggaa 1363 |||||||||||||| | ||||||||||||||| || ||| |||||||||| |||| |||| Sbjct: 706 cttaaatactggggccaaaatacaaagctgaatttctcggtttcagaatacgaaagggaa 765 Query: 1364 ctggcggacatacaagacatgtctccagaggaatgtgtgacatacttgcgaaggaggagc 1423 |||| ||||||| |||||||||| ||||||||| || |||||| | |||| || || Sbjct: 766 ctggaggacataagggacatgtctcgagaggaatgcgtaacatacctaagaagaagaagt 825 Query: 1424 agctgcttctcaagaggggcttctatttacagaggagttacaaggaggcagaaagatggt 1483 ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| Sbjct: 826 agctgcttctcaagaggggcttctatttatagaggagttactagaaggcagaaagatggg 885 Query: 1484 cgatggcaggcccgcataggactgattgctggaactagagacatttaccttggaactttc 1543 | |||||||| |||||||||||| |||||||||| |||||||||||||| ||||||||| Sbjct: 886 aggtggcaggcacgcataggactggttgctggaacaagagacatttacctgggaactttc 945 Query: 1544 aaaaccgaggaagaagctgcagaagcatatgatattgctgccattgagatacgtgggaaa 1603 ||||| ||||||||||| || || || || || |||||||| |||||||| ||||| ||| Sbjct: 946 aaaactgaggaagaagcagcggaggcttacgacattgctgctattgagatccgtggcaaa 1005 Query: 1604 aacgcggtgaccaactttgaccgaagcaactacatggacaggggcatgcattgtatagaa 1663 || ||||||||||||||||| ||||||||||||||||| | ||| ||||| ||||||||| Sbjct: 1006 aatgcggtgaccaactttgatcgaagcaactacatggagaagggtatgcactgtatagaa 1065 Query: 1664 ggggcagggttgaagctgcttgcaacgaagccagaatga 1702 |||||||| |||||||||||||| | |||||||||||| Sbjct: 1066 ggggcaggcttgaagctgcttgcgtctaagccagaatga 1104
>gb|AY109169.1| Zea mays PCO149281 mRNA sequence Length = 853 Score = 480 bits (242), Expect = e-132 Identities = 431/494 (87%) Strand = Plus / Plus Query: 1206 cttgcagagtagaaggacggagaaggaaagggaagcaagtttatttaggaagttatgata 1265 ||||||||||||| ||||| |||||||||||||| ||||||||| ||||||||||||||| Sbjct: 15 cttgcagagtagagggacgtagaaggaaagggaaacaagtttatctaggaagttatgata 74 Query: 1266 ctgagcaaaaagctgccagggcatatgatgttgcagctcttaaatactggggactaaata 1325 | ||| ||||||| |||||||| ||||||||||| ||| ||||||||||||| ||||| Sbjct: 75 ccgaggaaaaagcggccagggcttatgatgttgctgctattaaatactggggcgaaaata 134 Query: 1326 caaagctgaacttttcgatttcagaatatgaaaaggaactggcggacatacaagacatgt 1385 | | ||||||||| |||||||| |||| | ||||| ||| ||||||| || ||| Sbjct: 135 ccagactgaactttccgatttcacaatacggcaaggagttggaggacataagggatttgt 194 Query: 1386 ctccagaggaatgtgtgacatacttgcgaaggaggagcagctgcttctcaagaggggctt 1445 ||| |||||||||||||||||||||| ||||||||||||||||||| |||||||| |||| Sbjct: 195 ctcgagaggaatgtgtgacatacttgagaaggaggagcagctgcttttcaagaggagctt 254 Query: 1446 ctatttacagaggagttacaaggaggcagaaagatggtcgatggcaggcccgcataggac 1505 ||||||| |||||||| ||||| ||||||||||| || ||||||| || |||||||||| Sbjct: 255 ctatttatagaggagtgacaagaaggcagaaagacgggagatggcaagcacgcataggac 314 Query: 1506 tgattgctggaactagagacatttaccttggaactttcaaaaccgaggaagaagctgcag 1565 || ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||| Sbjct: 315 tggttgctggaactagagacatttacctgggaacattcaaaacagaggaagaagctgcag 374 Query: 1566 aagcatatgatattgctgccattgagatacgtgggaaaaacgcggtgaccaactttgacc 1625 | || ||||||||||||||||||||||||||||| |||||||| |||||||| ||||||| Sbjct: 375 aggcttatgatattgctgccattgagatacgtggcaaaaacgctgtgaccaattttgacc 434 Query: 1626 gaagcaactacatggacaggggcatgcattgtatagaaggggcagggttgaagctgcttg 1685 |||||||||| | || | ||| ||||| ||||||||||| | ||| |||| |||||||| Sbjct: 435 gaagcaactatgtcgataagggtatgcactgtatagaaggcgaaggcttgaggctgcttg 494 Query: 1686 caacgaagccagaa 1699 || | ||||||||| Sbjct: 495 catccaagccagaa 508
>ref|NM_001054652.1| Oryza sativa (japonica cultivar-group) Os02g0747600 (Os02g0747600) mRNA, complete cds Length = 1194 Score = 474 bits (239), Expect = e-130 Identities = 398/451 (88%) Strand = Plus / Plus Query: 1252 aggaagttatgatactgagcaaaaagctgccagggcatatgatgttgcagctcttaaata 1311 ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 744 aggaagttatgataccgaggaaaaagctgccaggtcatatgatgttgcagctcttaaata 803 Query: 1312 ctggggactaaatacaaagctgaacttttcgatttcagaatatgaaaaggaactggcgga 1371 |||||| | ||||||||||||||| || ||| |||||||||| |||| |||||||| ||| Sbjct: 804 ctggggccaaaatacaaagctgaatttctcggtttcagaatacgaaagggaactggagga 863 Query: 1372 catacaagacatgtctccagaggaatgtgtgacatacttgcgaaggaggagcagctgctt 1431 |||| |||||||||| ||||||||| || |||||| | |||| || || |||||||| Sbjct: 864 cataagggacatgtctcgagaggaatgcgtaacatacctaagaagaagaagtagctgctt 923 Query: 1432 ctcaagaggggcttctatttacagaggagttacaaggaggcagaaagatggtcgatggca 1491 ||||||||||||||||||||| ||||||||||| || |||||||||||||| | ||||| Sbjct: 924 ctcaagaggggcttctatttatagaggagttactagaaggcagaaagatgggaggtggca 983 Query: 1492 ggcccgcataggactgattgctggaactagagacatttaccttggaactttcaaaaccga 1551 ||| |||||||||||| |||||||||| |||||||||||||| |||||||||||||| || Sbjct: 984 ggcacgcataggactggttgctggaacaagagacatttacctgggaactttcaaaactga 1043 Query: 1552 ggaagaagctgcagaagcatatgatattgctgccattgagatacgtgggaaaaacgcggt 1611 ||||||||| || || || || || |||||||| |||||||| ||||| ||||| ||||| Sbjct: 1044 ggaagaagcagcggaggcttacgacattgctgctattgagatccgtggcaaaaatgcggt 1103 Query: 1612 gaccaactttgaccgaagcaactacatggacaggggcatgcattgtatagaaggggcagg 1671 |||||||||||| ||||||||||||||||| | ||| ||||| ||||||||||||||||| Sbjct: 1104 gaccaactttgatcgaagcaactacatggagaagggtatgcactgtatagaaggggcagg 1163 Query: 1672 gttgaagctgcttgcaacgaagccagaatga 1702 |||||||||||||| | |||||||||||| Sbjct: 1164 cttgaagctgcttgcgtctaagccagaatga 1194 Score = 83.8 bits (42), Expect = 2e-12 Identities = 73/82 (89%), Gaps = 1/82 (1%) Strand = Plus / Plus Query: 1159 caggcataggtggagtgggaaatatgaagctcatttgtgggacagtacttgcagagtaga 1218 ||||||||| |||||||| ||||||||||||||| ||||||||||| | |||||| | || Sbjct: 623 caggcatagatggagtggaaaatatgaagctcatctgtgggacagttcgtgcagaatgga 682 Query: 1219 aggacggagaaggaaagggaag 1240 ||| ||||||| |||||||||| Sbjct: 683 agggcggagaa-gaaagggaag 703 Score = 42.1 bits (21), Expect = 7.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1125 caggctcccggtcgtcttgttaccatggtgtgaccag 1161 ||||| ||||||| ||| ||| ||||||||||||||| Sbjct: 527 caggcacccggtcatctagtttccatggtgtgaccag 563
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 155 bits (78), Expect = 7e-34 Identities = 138/158 (87%) Strand = Plus / Minus Query: 1545 aaaccgaggaagaagctgcagaagcatatgatattgctgccattgagatacgtgggaaaa 1604 |||| ||||||||||| || || || || || |||||||| |||||||| ||||| |||| Sbjct: 31428991 aaactgaggaagaagcagcggaggcttacgacattgctgctattgagatccgtggcaaaa 31428932 Query: 1605 acgcggtgaccaactttgaccgaagcaactacatggacaggggcatgcattgtatagaag 1664 | ||||||||||||||||| ||||||||||||||||| | ||| ||||| |||||||||| Sbjct: 31428931 atgcggtgaccaactttgatcgaagcaactacatggagaagggtatgcactgtatagaag 31428872 Query: 1665 gggcagggttgaagctgcttgcaacgaagccagaatga 1702 ||||||| |||||||||||||| | |||||||||||| Sbjct: 31428871 gggcaggcttgaagctgcttgcgtctaagccagaatga 31428834 Score = 127 bits (64), Expect = 2e-25 Identities = 79/84 (94%) Strand = Plus / Minus Query: 1252 aggaagttatgatactgagcaaaaagctgccagggcatatgatgttgcagctcttaaata 1311 ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 31429612 aggaagttatgataccgaggaaaaagctgccaggtcatatgatgttgcagctcttaaata 31429553 Query: 1312 ctggggactaaatacaaagctgaa 1335 |||||| | ||||||||||||||| Sbjct: 31429552 ctggggccaaaatacaaagctgaa 31429529 Score = 95.6 bits (48), Expect = 6e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 1469 aggcagaaagatggtcgatggcaggcccgcataggactgattgctggaactagagacatt 1528 |||||||||||||| | |||||||| |||||||||||| |||||||||| ||||||||| Sbjct: 31429154 aggcagaaagatgggaggtggcaggcacgcataggactggttgctggaacaagagacatt 31429095 Query: 1529 taccttggaactttca 1544 ||||| |||||||||| Sbjct: 31429094 tacctgggaactttca 31429079 Score = 83.8 bits (42), Expect = 2e-12 Identities = 73/82 (89%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 1159 caggcataggtggagtgggaaatatgaagctcatttgtgggacagtacttgcagagtaga 1218 ||||||||| |||||||| ||||||||||||||| ||||||||||| | |||||| | || Sbjct: 31431402 caggcatagatggagtggaaaatatgaagctcatctgtgggacagttcgtgcagaatgga 31431343 Query: 1219 aggacggagaaggaaagggaag 1240 ||| ||||||| |||||||||| Sbjct: 31431342 agggcggagaa-gaaagggaag 31431322 Score = 73.8 bits (37), Expect = 2e-09 Identities = 40/41 (97%) Strand = Plus / Minus Query: 1424 agctgcttctcaagaggggcttctatttacagaggagttac 1464 ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 31429295 agctgcttctcaagaggggcttctatttatagaggagttac 31429255 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 43 caaatcttttcttctccttctcc 65 ||||||||||||||||||||||| Sbjct: 2096738 caaatcttttcttctccttctcc 2096760 Score = 44.1 bits (22), Expect = 1.8 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1125 caggctcccggtcgtcttgttaccatggtgtgaccagg 1162 ||||| ||||||| ||| ||| |||||||||||||||| Sbjct: 31431588 caggcacccggtcatctagtttccatggtgtgaccagg 31431551
>dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0024K03 Length = 119796 Score = 155 bits (78), Expect = 7e-34 Identities = 138/158 (87%) Strand = Plus / Minus Query: 1545 aaaccgaggaagaagctgcagaagcatatgatattgctgccattgagatacgtgggaaaa 1604 |||| ||||||||||| || || || || || |||||||| |||||||| ||||| |||| Sbjct: 111565 aaactgaggaagaagcagcggaggcttacgacattgctgctattgagatccgtggcaaaa 111506 Query: 1605 acgcggtgaccaactttgaccgaagcaactacatggacaggggcatgcattgtatagaag 1664 | ||||||||||||||||| ||||||||||||||||| | ||| ||||| |||||||||| Sbjct: 111505 atgcggtgaccaactttgatcgaagcaactacatggagaagggtatgcactgtatagaag 111446 Query: 1665 gggcagggttgaagctgcttgcaacgaagccagaatga 1702 ||||||| |||||||||||||| | |||||||||||| Sbjct: 111445 gggcaggcttgaagctgcttgcgtctaagccagaatga 111408 Score = 127 bits (64), Expect = 2e-25 Identities = 79/84 (94%) Strand = Plus / Minus Query: 1252 aggaagttatgatactgagcaaaaagctgccagggcatatgatgttgcagctcttaaata 1311 ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 112186 aggaagttatgataccgaggaaaaagctgccaggtcatatgatgttgcagctcttaaata 112127 Query: 1312 ctggggactaaatacaaagctgaa 1335 |||||| | ||||||||||||||| Sbjct: 112126 ctggggccaaaatacaaagctgaa 112103 Score = 95.6 bits (48), Expect = 6e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 1469 aggcagaaagatggtcgatggcaggcccgcataggactgattgctggaactagagacatt 1528 |||||||||||||| | |||||||| |||||||||||| |||||||||| ||||||||| Sbjct: 111728 aggcagaaagatgggaggtggcaggcacgcataggactggttgctggaacaagagacatt 111669 Query: 1529 taccttggaactttca 1544 ||||| |||||||||| Sbjct: 111668 tacctgggaactttca 111653 Score = 83.8 bits (42), Expect = 2e-12 Identities = 73/82 (89%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 1159 caggcataggtggagtgggaaatatgaagctcatttgtgggacagtacttgcagagtaga 1218 ||||||||| |||||||| ||||||||||||||| ||||||||||| | |||||| | || Sbjct: 113976 caggcatagatggagtggaaaatatgaagctcatctgtgggacagttcgtgcagaatgga 113917 Query: 1219 aggacggagaaggaaagggaag 1240 ||| ||||||| |||||||||| Sbjct: 113916 agggcggagaa-gaaagggaag 113896 Score = 73.8 bits (37), Expect = 2e-09 Identities = 40/41 (97%) Strand = Plus / Minus Query: 1424 agctgcttctcaagaggggcttctatttacagaggagttac 1464 ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 111869 agctgcttctcaagaggggcttctatttatagaggagttac 111829 Score = 44.1 bits (22), Expect = 1.8 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1125 caggctcccggtcgtcttgttaccatggtgtgaccagg 1162 ||||| ||||||| ||| ||| |||||||||||||||| Sbjct: 114162 caggcacccggtcatctagtttccatggtgtgaccagg 114125
>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078N11 Length = 155168 Score = 155 bits (78), Expect = 7e-34 Identities = 138/158 (87%) Strand = Plus / Minus Query: 1545 aaaccgaggaagaagctgcagaagcatatgatattgctgccattgagatacgtgggaaaa 1604 |||| ||||||||||| || || || || || |||||||| |||||||| ||||| |||| Sbjct: 64388 aaactgaggaagaagcagcggaggcttacgacattgctgctattgagatccgtggcaaaa 64329 Query: 1605 acgcggtgaccaactttgaccgaagcaactacatggacaggggcatgcattgtatagaag 1664 | ||||||||||||||||| ||||||||||||||||| | ||| ||||| |||||||||| Sbjct: 64328 atgcggtgaccaactttgatcgaagcaactacatggagaagggtatgcactgtatagaag 64269 Query: 1665 gggcagggttgaagctgcttgcaacgaagccagaatga 1702 ||||||| |||||||||||||| | |||||||||||| Sbjct: 64268 gggcaggcttgaagctgcttgcgtctaagccagaatga 64231 Score = 127 bits (64), Expect = 2e-25 Identities = 79/84 (94%) Strand = Plus / Minus Query: 1252 aggaagttatgatactgagcaaaaagctgccagggcatatgatgttgcagctcttaaata 1311 ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 65009 aggaagttatgataccgaggaaaaagctgccaggtcatatgatgttgcagctcttaaata 64950 Query: 1312 ctggggactaaatacaaagctgaa 1335 |||||| | ||||||||||||||| Sbjct: 64949 ctggggccaaaatacaaagctgaa 64926 Score = 95.6 bits (48), Expect = 6e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 1469 aggcagaaagatggtcgatggcaggcccgcataggactgattgctggaactagagacatt 1528 |||||||||||||| | |||||||| |||||||||||| |||||||||| ||||||||| Sbjct: 64551 aggcagaaagatgggaggtggcaggcacgcataggactggttgctggaacaagagacatt 64492 Query: 1529 taccttggaactttca 1544 ||||| |||||||||| Sbjct: 64491 tacctgggaactttca 64476 Score = 83.8 bits (42), Expect = 2e-12 Identities = 73/82 (89%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 1159 caggcataggtggagtgggaaatatgaagctcatttgtgggacagtacttgcagagtaga 1218 ||||||||| |||||||| ||||||||||||||| ||||||||||| | |||||| | || Sbjct: 66799 caggcatagatggagtggaaaatatgaagctcatctgtgggacagttcgtgcagaatgga 66740 Query: 1219 aggacggagaaggaaagggaag 1240 ||| ||||||| |||||||||| Sbjct: 66739 agggcggagaa-gaaagggaag 66719 Score = 73.8 bits (37), Expect = 2e-09 Identities = 40/41 (97%) Strand = Plus / Minus Query: 1424 agctgcttctcaagaggggcttctatttacagaggagttac 1464 ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 64692 agctgcttctcaagaggggcttctatttatagaggagttac 64652 Score = 44.1 bits (22), Expect = 1.8 Identities = 34/38 (89%) Strand = Plus / Minus Query: 1125 caggctcccggtcgtcttgttaccatggtgtgaccagg 1162 ||||| ||||||| ||| ||| |||||||||||||||| Sbjct: 66985 caggcacccggtcatctagtttccatggtgtgaccagg 66948
>ref|NM_001064791.1| Oryza sativa (japonica cultivar-group) Os06g0657500 (Os06g0657500) mRNA, complete cds Length = 1744 Score = 67.9 bits (34), Expect = 1e-07 Identities = 52/58 (89%) Strand = Plus / Plus Query: 1410 tgcgaaggaggagcagctgcttctcaagaggggcttctatttacagaggagttacaag 1467 |||| |||| ||||||| ||||||||||||||||||| || ||||||||||| ||||| Sbjct: 773 tgcgcaggaagagcagcggcttctcaagaggggcttccatctacagaggagtaacaag 830
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 67.9 bits (34), Expect = 1e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 1415 aggaggagcagctgcttctcaagaggggcttctatttacagaggagttacaagg 1468 |||| ||||||| ||||||||||||||||||| || ||||||||||| |||||| Sbjct: 26643781 aggaagagcagcggcttctcaagaggggcttccatctacagaggagtaacaagg 26643834
>dbj|AP005760.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1047G05 Length = 145431 Score = 67.9 bits (34), Expect = 1e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 1415 aggaggagcagctgcttctcaagaggggcttctatttacagaggagttacaagg 1468 |||| ||||||| ||||||||||||||||||| || ||||||||||| |||||| Sbjct: 1244 aggaagagcagcggcttctcaagaggggcttccatctacagaggagtaacaagg 1297
>dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0677B10 Length = 134423 Score = 67.9 bits (34), Expect = 1e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 1415 aggaggagcagctgcttctcaagaggggcttctatttacagaggagttacaagg 1468 |||| ||||||| ||||||||||||||||||| || ||||||||||| |||||| Sbjct: 60211 aggaagagcagcggcttctcaagaggggcttccatctacagaggagtaacaagg 60264
>dbj|AK101959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075O07, full insert sequence Length = 1745 Score = 67.9 bits (34), Expect = 1e-07 Identities = 52/58 (89%) Strand = Plus / Plus Query: 1410 tgcgaaggaggagcagctgcttctcaagaggggcttctatttacagaggagttacaag 1467 |||| |||| ||||||| ||||||||||||||||||| || ||||||||||| ||||| Sbjct: 774 tgcgcaggaagagcagcggcttctcaagaggggcttccatctacagaggagtaacaag 831
>gb|AY461432.1| Nicotiana tabacum ANT-like protein mRNA, complete cds Length = 2546 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 1553 gaagaagctgcagaagcatatgatattgctgc 1584 |||||||||||||||||||||||| ||||||| Sbjct: 1684 gaagaagctgcagaagcatatgatgttgctgc 1715
>dbj|AB101585.1| Pinus thunbergii PtANTL1 mRNA for AINTEGUMENTA-like protein, complete cds Length = 2412 Score = 56.0 bits (28), Expect = 5e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 1232 aaagggaagcaagtttatttaggaagttatgatactgagcaaaaagctgccagggcatat 1291 ||||||| ||||||||||| ||| ||||||| | || ||||||| || ||||||||| Sbjct: 776 aaagggagacaagtttatttgggaggttatgacaaagaagaaaaagcagcaagggcatat 835 Query: 1292 gatgttgcagctcttaaatactggggac 1319 ||| | ||||||||||| || ||||||| Sbjct: 836 gatttggcagctcttaagtattggggac 863
>gb|DQ666348.1| Medicago truncatula AP2/EREBP transcription factor PLETHORA1 (PLT1) mRNA, partial cds Length = 544 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1547 accgaggaagaagctgcagaagcatatgatattgctgc 1584 ||||||||||| ||||||||||||||||| || ||||| Sbjct: 48 accgaggaagaggctgcagaagcatatgacatagctgc 85
>gb|AC183304.14| Medicago truncatula chromosome 8 clone mth2-68f12, complete sequence Length = 128668 Score = 50.1 bits (25), Expect = 0.029 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1553 gaagaagctgcagaagcatatgatattgc 1581 ||||| ||||||||||||||||||||||| Sbjct: 122963 gaagaggctgcagaagcatatgatattgc 122935
>gb|AC144645.17| Medicago truncatula clone mth2-11e15, complete sequence Length = 124394 Score = 50.1 bits (25), Expect = 0.029 Identities = 28/29 (96%) Strand = Plus / Minus Query: 1553 gaagaagctgcagaagcatatgatattgc 1581 ||||| ||||||||||||||||||||||| Sbjct: 38500 gaagaggctgcagaagcatatgatattgc 38472
>gb|AC135801.24| Medicago truncatula clone mth2-23o16, complete sequence Length = 115452 Score = 50.1 bits (25), Expect = 0.029 Identities = 28/29 (96%) Strand = Plus / Plus Query: 1553 gaagaagctgcagaagcatatgatattgc 1581 ||||||||||||||||| ||||||||||| Sbjct: 102098 gaagaagctgcagaagcgtatgatattgc 102126
>emb|Z47554.1|ZMMHCF1 Z.mays mRNA for open reading frame Length = 1773 Score = 48.1 bits (24), Expect = 0.12 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1409 ttgcgaaggaggagcagctgcttctcaagaggggcttctatttacagaggagttacaagg 1468 ||||| |||| ||||||| |||||||| |||| || || || ||||||||||| |||||| Sbjct: 753 ttgcgcaggaagagcagcggcttctcacgaggcgcctccatctacagaggagtcacaagg 812
>gb|AY109146.1| Zea mays PCO137288 mRNA sequence Length = 1753 Score = 48.1 bits (24), Expect = 0.12 Identities = 51/60 (85%) Strand = Plus / Plus Query: 1409 ttgcgaaggaggagcagctgcttctcaagaggggcttctatttacagaggagttacaagg 1468 ||||| |||| ||||||| |||||||| |||| || || || ||||||||||| |||||| Sbjct: 714 ttgcgcaggaagagcagcggcttctcacgaggcgcctccatctacagaggagtcacaagg 773
>emb|CU179904.1| Medicago truncatula chromosome 5 clone mth2-104i2, COMPLETE SEQUENCE Length = 127762 Score = 46.1 bits (23), Expect = 0.46 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1430 ttctcaagaggggcttctatttacagaggagttacaagg 1468 ||||||||||||||||| || || |||||||| |||||| Sbjct: 67022 ttctcaagaggggcttccatgtatagaggagtaacaagg 67060
>emb|CU013517.1| Medicago truncatula chromosome 5 clone mth2-76o9, COMPLETE SEQUENCE Length = 124308 Score = 46.1 bits (23), Expect = 0.46 Identities = 35/39 (89%) Strand = Plus / Minus Query: 1430 ttctcaagaggggcttctatttacagaggagttacaagg 1468 ||||||||||||||||| || || |||||||| |||||| Sbjct: 82870 ttctcaagaggggcttccatgtatagaggagtaacaagg 82832
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 43 caaatcttttcttctccttctcc 65 ||||||||||||||||||||||| Sbjct: 146946 caaatcttttcttctccttctcc 146968
>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1679_B08 Length = 142529 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 43 caaatcttttcttctccttctcc 65 ||||||||||||||||||||||| Sbjct: 11431 caaatcttttcttctccttctcc 11453
>dbj|AK101322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034E16, full insert sequence Length = 2462 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Plus Query: 43 caaatcttttcttctccttctcc 65 ||||||||||||||||||||||| Sbjct: 114 caaatcttttcttctccttctcc 136
>gb|AC126784.11| Medicago truncatula clone mth2-36b12, complete sequence Length = 129102 Score = 46.1 bits (23), Expect = 0.46 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1180 atatgaagctcatttgtgggaca 1202 ||||||||||||||||||||||| Sbjct: 61366 atatgaagctcatttgtgggaca 61344
>ref|XM_001032609.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00585030) mRNA, complete cds Length = 10503 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1795 tttgctgctgtatgattcttcagatt 1820 ||||||||||| |||||||||||||| Sbjct: 1932 tttgctgctgtttgattcttcagatt 1907
>ref|NM_001074253.1| Oryza sativa (japonica cultivar-group) Os11g0295900 (Os11g0295900) mRNA, complete cds Length = 1695 Score = 44.1 bits (22), Expect = 1.8 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1272 aaaaagctgccagggcatatgatgttgcagctcttaaatactgggg 1317 |||||||||| ||||| |||||| | || || |||||||||||||| Sbjct: 647 aaaaagctgctagggcttatgatttggctgcccttaaatactgggg 692 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1556 gaagctgcagaagcatatgatattgctgc 1584 ||||||||||| ||||||||||| ||||| Sbjct: 931 gaagctgcagaggcatatgatatcgctgc 959
>gb|AC136501.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0044M15, complete sequence Length = 144568 Score = 44.1 bits (22), Expect = 1.8 Identities = 40/46 (86%) Strand = Plus / Minus Query: 1272 aaaaagctgccagggcatatgatgttgcagctcttaaatactgggg 1317 |||||||||| ||||| |||||| | || || |||||||||||||| Sbjct: 52473 aaaaagctgctagggcttatgatttggctgcccttaaatactgggg 52428 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1556 gaagctgcagaagcatatgatattgctgc 1584 ||||||||||| ||||||||||| ||||| Sbjct: 51223 gaagctgcagaggcatatgatatcgctgc 51195
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 1.8 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1272 aaaaagctgccagggcatatgatgttgcagctcttaaatactgggg 1317 |||||||||| ||||| |||||| | || || |||||||||||||| Sbjct: 10764998 aaaaagctgctagggcttatgatttggctgcccttaaatactgggg 10765043 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1556 gaagctgcagaagcatatgatattgctgc 1584 ||||||||||| ||||||||||| ||||| Sbjct: 10766248 gaagctgcagaggcatatgatatcgctgc 10766276
>emb|AL662783.13| Mouse DNA sequence from clone RP23-378N18 on chromosome 11 Contains the 5' end of a novel gene, a novel gene (4933430M04Rik) and a pseudogene similar to part of DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (Ddx5), complete sequence Length = 181503 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1829 ttcttccagagagaatttcagt 1850 |||||||||||||||||||||| Sbjct: 110134 ttcttccagagagaatttcagt 110155
>gb|AC084427.1|CBRG27P14 Caenorhabditis briggsae cosmid G27P14, complete sequence Length = 41724 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1431 tctcaagaggggcttctattta 1452 |||||||||||||||||||||| Sbjct: 24957 tctcaagaggggcttctattta 24936
>gb|AC078940.4| Homo sapiens BAC clone RP11-144B8 from 2, complete sequence Length = 166315 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1064 gagtatagagaggagaagggcg 1085 |||||||||||||||||||||| Sbjct: 77518 gagtatagagaggagaagggcg 77539
>emb|AL359950.4|CNS05TF2 Human chromosome 14 DNA sequence BAC R-566K8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 194407 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1017 atgagcctgaggaaattgttga 1038 |||||||||||||||||||||| Sbjct: 162767 atgagcctgaggaaattgttga 162746
>gb|BT029368.1| Arabidopsis thaliana At1g79700 mRNA, complete cds Length = 912 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1160 aggcataggtggagtgggaaatatgaagctcatttgtggga 1200 |||||||| |||| ||||| ||| ||||| ||||||||||| Sbjct: 172 aggcatagatggactgggagatacgaagcgcatttgtggga 212
>dbj|AK241712.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065197H24, full insert sequence Length = 2375 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1157 accaggcataggtggagtgggaaatatga 1185 |||||||||||||||| ||||| |||||| Sbjct: 1013 accaggcataggtggactgggagatatga 1041
>ref|NM_001057938.1| Oryza sativa (japonica cultivar-group) Os03g0770700 (Os03g0770700) mRNA, complete cds Length = 1908 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1157 accaggcataggtggagtgggaaatatga 1185 |||||||||||||||| ||||| |||||| Sbjct: 928 accaggcataggtggactgggagatatga 956
>gb|CP000247.1| Escherichia coli 536, complete genome Length = 4938920 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 ttttcttctccttctccaccagcga 73 |||||||||||||||||| |||||| Sbjct: 2794868 ttttcttctccttctccatcagcga 2794844
>emb|CT027816.9| Zebrafish DNA sequence from clone CH211-190L17 in linkage group 10, complete sequence Length = 90218 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1358 aaggaactggcggacatacaa 1378 ||||||||||||||||||||| Sbjct: 40703 aaggaactggcggacatacaa 40683
>ref|NM_106619.2| Arabidopsis thaliana DNA binding / transcription factor (AT1G79700) mRNA, complete cds Length = 1147 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1160 aggcataggtggagtgggaaatatgaagctcatttgtggga 1200 |||||||| |||| ||||| ||| ||||| ||||||||||| Sbjct: 238 aggcatagatggactgggagatacgaagcgcatttgtggga 278
>ref|NM_119937.2| Arabidopsis thaliana ANT (AINTEGUMENTA); DNA binding / transcription factor (ANT) mRNA, complete cds Length = 2148 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1529 taccttggaactttcaaaaccgaggaagaagctgcagaagc 1569 |||||||||||||| |||| | ||||||||||||||||| Sbjct: 1502 taccttggaacttttggaacccaagaagaagctgcagaagc 1542
>gb|U40256.1|ATU40256 Arabidopsis thaliana ovule development protein (AINTEGUMENTA) mRNA, complete cds Length = 2148 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1529 taccttggaactttcaaaaccgaggaagaagctgcagaagc 1569 |||||||||||||| |||| | ||||||||||||||||| Sbjct: 1502 taccttggaacttttggaacccaagaagaagctgcagaagc 1542
>gb|AC147050.2| Pan troglodytes BAC clone RP43-138F4 from 7, complete sequence Length = 190626 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 826 gaagaatgaggaagttgatga 846 ||||||||||||||||||||| Sbjct: 62816 gaagaatgaggaagttgatga 62836
>gb|AC121607.2| Mus musculus BAC clone RP23-314P9 from 1, complete sequence Length = 158056 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1381 catgtctccagaggaatgtgtgaca 1405 |||| |||||||||||||||||||| Sbjct: 21951 catggctccagaggaatgtgtgaca 21927
>gb|AC121593.3| Mus musculus BAC clone RP23-292N18 from 6, complete sequence Length = 179881 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1343 atttcagaatatgaaaaggaa 1363 ||||||||||||||||||||| Sbjct: 99582 atttcagaatatgaaaaggaa 99562
>gb|AC140951.1| Pan troglodytes BAC clone RP43-60K3 from 7, complete sequence Length = 165269 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 826 gaagaatgaggaagttgatga 846 ||||||||||||||||||||| Sbjct: 8435 gaagaatgaggaagttgatga 8455
>gb|AC148300.3| Pan troglodytes BAC clone CH251-64B13 from chromosome 7, complete sequence Length = 173568 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 826 gaagaatgaggaagttgatga 846 ||||||||||||||||||||| Sbjct: 62793 gaagaatgaggaagttgatga 62813
>gb|AY117207.1| Arabidopsis thaliana putative ovule development protein aintegumenta (At4g37750) mRNA, complete cds Length = 1699 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1529 taccttggaactttcaaaaccgaggaagaagctgcagaagc 1569 |||||||||||||| |||| | ||||||||||||||||| Sbjct: 1234 taccttggaacttttggaacccaagaagaagctgcagaagc 1274
>gb|AY080706.1| Arabidopsis thaliana putative ovule development protein aintegumenta (At4g37750) mRNA, complete cds Length = 2056 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1529 taccttggaactttcaaaaccgaggaagaagctgcagaagc 1569 |||||||||||||| |||| | ||||||||||||||||| Sbjct: 1391 taccttggaacttttggaacccaagaagaagctgcagaagc 1431
>gb|AC115112.5| Homo sapiens BAC clone RP11-427M12 from 4, complete sequence Length = 142494 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1033 tgttgattctattaatcctgt 1053 ||||||||||||||||||||| Sbjct: 6550 tgttgattctattaatcctgt 6530
>gb|AC149329.2| Phakopsora pachyrhizi clone JGIAFNA-13C17, complete sequence Length = 39794 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 tatttccccttttgctttctt 287 ||||||||||||||||||||| Sbjct: 35557 tatttccccttttgctttctt 35577
>emb|AJ421478.1| Mus musculus X-inactivation center region; segment 1/3 Length = 247850 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1308 aatactggggactaaatacaa 1328 ||||||||||||||||||||| Sbjct: 123121 aatactggggactaaatacaa 123101
>gb|AC087072.2|AC087072 Homo sapiens chromosome 7 clone RP11-609L3, complete sequence Length = 150856 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 826 gaagaatgaggaagttgatga 846 ||||||||||||||||||||| Sbjct: 148203 gaagaatgaggaagttgatga 148183
>gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19K16 genomic sequence, complete sequence Length = 111301 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1160 aggcataggtggagtgggaaatatgaagctcatttgtggga 1200 |||||||| |||| ||||| ||| ||||| ||||||||||| Sbjct: 110774 aggcatagatggactgggagatacgaagcgcatttgtggga 110814
>gb|AC083864.2|AC083864 Homo sapiens chromosome 7 clone RP11-196O2, complete sequence Length = 156064 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 826 gaagaatgaggaagttgatga 846 ||||||||||||||||||||| Sbjct: 118880 gaagaatgaggaagttgatga 118900
>dbj|AK117366.1| Arabidopsis thaliana mRNA for unknown protein, complete cds, clone: RAFL16-93-K12 Length = 755 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 1160 aggcataggtggagtgggaaatatgaagctcatttgtggga 1200 |||||||| |||| ||||| ||| ||||| ||||||||||| Sbjct: 215 aggcatagatggactgggagatacgaagcgcatttgtggga 175
>dbj|AK117300.1| Arabidopsis thaliana mRNA for unknown protein, complete cds, clone: RAFL16-86-I04 Length = 2045 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1160 aggcataggtggagtgggaaatatgaagctcatttgtggga 1200 |||||||| |||| ||||| ||| ||||| ||||||||||| Sbjct: 238 aggcatagatggactgggagatacgaagcgcatttgtggga 278
>emb|BX826541.1|CNS0A4GJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB37ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2106 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1529 taccttggaactttcaaaaccgaggaagaagctgcagaagc 1569 |||||||||||||| |||| | ||||||||||||||||| Sbjct: 1495 taccttggaacttttggaacccaagaagaagctgcagaagc 1535
>gb|AC156989.3| Mus musculus chromosome 1, clone RP23-379L2, complete sequence Length = 188691 Score = 42.1 bits (21), Expect = 7.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1229 aggaaagggaagcaagtttatttag 1253 |||||||||||||||||| |||||| Sbjct: 101305 aggaaagggaagcaagttcatttag 101281
>gb|AC010793.3|AC010793 Genomic sequence for Arabidopsis thaliana BAC F20B17 from chromosome I, complete sequence Length = 90149 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 1160 aggcataggtggagtgggaaatatgaagctcatttgtggga 1200 |||||||| |||| ||||| ||| ||||| ||||||||||| Sbjct: 56055 aggcatagatggactgggagatacgaagcgcatttgtggga 56015
>gb|AC011362.2|AC011362 Homo sapiens chromosome 5 clone CTC-503K11, complete sequence Length = 176029 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 ttcttctccttctccaccagc 71 ||||||||||||||||||||| Sbjct: 44336 ttcttctccttctccaccagc 44356
>emb|AJ580379.1|ATH580379 Arabidopsis thaliana mRNA for putative AP2 domain transcription factor, clone At1g79700-like Length = 912 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1160 aggcataggtggagtgggaaatatgaagctcatttgtggga 1200 |||||||| |||| ||||| ||| ||||| ||||||||||| Sbjct: 172 aggcatagatggactgggagatacgaagcgcatttgtggga 212
>gb|AY685120.1| Oryza sativa (japonica cultivar-group) transcription factor AP2D17 (AP2D17) mRNA, partial cds Length = 364 Score = 42.1 bits (21), Expect = 7.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1556 gaagctgcagaagcatatgatattgctgc 1584 ||||||||||| ||||||||||| ||||| Sbjct: 255 gaagctgcagaggcatatgatatcgctgc 283
>emb|AL929540.9| Mouse DNA sequence from clone RP23-132M12 on chromosome X, complete sequence Length = 145087 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1141 ttgttaccatggtgtgaccag 1161 ||||||||||||||||||||| Sbjct: 68368 ttgttaccatggtgtgaccag 68388
>gb|U41339.1|ATU41339 Arabidopsis thaliana ANT (AINTEGUMENTA) mRNA, complete cds Length = 1905 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1529 taccttggaactttcaaaaccgaggaagaagctgcagaagc 1569 |||||||||||||| |||| | ||||||||||||||||| Sbjct: 1271 taccttggaacttttggaacccaagaagaagctgcagaagc 1311
>emb|AL671187.9| Mouse DNA sequence from clone RP23-273N4 on chromosome X, complete sequence Length = 205749 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1308 aatactggggactaaatacaa 1328 ||||||||||||||||||||| Sbjct: 47693 aatactggggactaaatacaa 47713
>gb|U44028.1|ATU44028 Arabidopsis thaliana transcription factor CKC mRNA, complete cds Length = 1955 Score = 42.1 bits (21), Expect = 7.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1529 taccttggaactttcaaaaccgaggaagaagctgcagaagc 1569 |||||||||||||| |||| | ||||||||||||||||| Sbjct: 1309 taccttggaacttttggaacccaagaagaagctgcagaagc 1349
>gb|AC166106.3| Mus musculus BAC clone RP23-204F4 from chromosome 14, complete sequence Length = 191630 Score = 42.1 bits (21), Expect = 7.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1190 catttgtgggacagtacttgc 1210 ||||||||||||||||||||| Sbjct: 115625 catttgtgggacagtacttgc 115645 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 329,600,657 Number of extensions: 17228503 Number of successful extensions: 388505 Number of sequences better than 10.0: 68 Number of HSP's gapped: 388503 Number of HSP's successfully gapped: 89 Length of query: 1874 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1851 Effective length of database: 18,503,978,556 Effective search space: 34250864307156 Effective search space used: 34250864307156 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)