ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf180b05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK242387.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 601 e-168
2gb|AY685114.1| Oryza sativa (japonica cultivar-group) transcript... 601 e-168
3gb|AY109169.1| Zea mays PCO149281 mRNA sequence 480 e-132
4ref|NM_001054652.1| Oryza sativa (japonica cultivar-group) Os02g... 474 e-130
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 155 7e-34
6dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic D... 155 7e-34
7dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic D... 155 7e-34
8ref|NM_001064791.1| Oryza sativa (japonica cultivar-group) Os06g... 68 1e-07
9dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 68 1e-07
10dbj|AP005760.3| Oryza sativa (japonica cultivar-group) genomic D... 68 1e-07
11dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic D... 68 1e-07
12dbj|AK101959.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-07
13gb|AY461432.1| Nicotiana tabacum ANT-like protein mRNA, complete... 56 5e-04
14dbj|AB101585.1| Pinus thunbergii PtANTL1 mRNA for AINTEGUMENTA-l... 56 5e-04
15gb|DQ666348.1| Medicago truncatula AP2/EREBP transcription facto... 52 0.007
16gb|AC183304.14| Medicago truncatula chromosome 8 clone mth2-68f1... 50 0.029
17gb|AC144645.17| Medicago truncatula clone mth2-11e15, complete s... 50 0.029
18gb|AC135801.24| Medicago truncatula clone mth2-23o16, complete s... 50 0.029
19emb|Z47554.1|ZMMHCF1 Z.mays mRNA for open reading frame 48 0.12
20gb|AY109146.1| Zea mays PCO137288 mRNA sequence 48 0.12
21emb|CU179904.1| Medicago truncatula chromosome 5 clone mth2-104i... 46 0.46
22emb|CU013517.1| Medicago truncatula chromosome 5 clone mth2-76o9... 46 0.46
23dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.46
24dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.46
25dbj|AK101322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.46
26gb|AC126784.11| Medicago truncatula clone mth2-36b12, complete s... 46 0.46
27ref|XM_001032609.1| Tetrahymena thermophila SB210 hypothetical p... 44 1.8
28ref|NM_001074253.1| Oryza sativa (japonica cultivar-group) Os11g... 44 1.8
29gb|AC136501.2| Oryza sativa (japonica cultivar-group) chromosome... 44 1.8
30dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 1.8
31emb|AL662783.13| Mouse DNA sequence from clone RP23-378N18 on ch... 44 1.8
32gb|AC084427.1|CBRG27P14 Caenorhabditis briggsae cosmid G27P14, c... 44 1.8
33gb|AC078940.4| Homo sapiens BAC clone RP11-144B8 from 2, complet... 44 1.8
34emb|AL359950.4|CNS05TF2 Human chromosome 14 DNA sequence BAC R-5... 44 1.8
35gb|BT029368.1| Arabidopsis thaliana At1g79700 mRNA, complete cds 42 7.2
36dbj|AK241712.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 42 7.2
37ref|NM_001057938.1| Oryza sativa (japonica cultivar-group) Os03g... 42 7.2
38gb|CP000247.1| Escherichia coli 536, complete genome 42 7.2
39emb|CT027816.9| Zebrafish DNA sequence from clone CH211-190L17 i... 42 7.2
40ref|NM_106619.2| Arabidopsis thaliana DNA binding / transcriptio... 42 7.2
41ref|NM_119937.2| Arabidopsis thaliana ANT (AINTEGUMENTA); DNA bi... 42 7.2
42gb|U40256.1|ATU40256 Arabidopsis thaliana ovule development prot... 42 7.2
43gb|AC147050.2| Pan troglodytes BAC clone RP43-138F4 from 7, comp... 42 7.2
44gb|AC121607.2| Mus musculus BAC clone RP23-314P9 from 1, complet... 42 7.2
45gb|AC121593.3| Mus musculus BAC clone RP23-292N18 from 6, comple... 42 7.2
46gb|AC140951.1| Pan troglodytes BAC clone RP43-60K3 from 7, compl... 42 7.2
47gb|AC148300.3| Pan troglodytes BAC clone CH251-64B13 from chromo... 42 7.2
48gb|AY117207.1| Arabidopsis thaliana putative ovule development p... 42 7.2
49gb|AY080706.1| Arabidopsis thaliana putative ovule development p... 42 7.2
50gb|AC115112.5| Homo sapiens BAC clone RP11-427M12 from 4, comple... 42 7.2
51gb|AC149329.2| Phakopsora pachyrhizi clone JGIAFNA-13C17, comple... 42 7.2
52emb|AJ421478.1| Mus musculus X-inactivation center region; segme... 42 7.2
53gb|AC087072.2|AC087072 Homo sapiens chromosome 7 clone RP11-609L... 42 7.2
54gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19... 42 7.2
55gb|AC083864.2|AC083864 Homo sapiens chromosome 7 clone RP11-196O... 42 7.2
56dbj|AK117366.1| Arabidopsis thaliana mRNA for unknown protein, c... 42 7.2
57dbj|AK117300.1| Arabidopsis thaliana mRNA for unknown protein, c... 42 7.2
58emb|BX826541.1|CNS0A4GJ Arabidopsis thaliana Full-length cDNA Co... 42 7.2
59gb|AC156989.3| Mus musculus chromosome 1, clone RP23-379L2, comp... 42 7.2
60gb|AC010793.3|AC010793 Genomic sequence for Arabidopsis thaliana... 42 7.2
61gb|AC011362.2|AC011362 Homo sapiens chromosome 5 clone CTC-503K1... 42 7.2
62emb|AJ580379.1|ATH580379 Arabidopsis thaliana mRNA for putative ... 42 7.2
63gb|AY685120.1| Oryza sativa (japonica cultivar-group) transcript... 42 7.2
64emb|AL929540.9| Mouse DNA sequence from clone RP23-132M12 on chr... 42 7.2
65gb|U41339.1|ATU41339 Arabidopsis thaliana ANT (AINTEGUMENTA) mRN... 42 7.2
66emb|AL671187.9| Mouse DNA sequence from clone RP23-273N4 on chro... 42 7.2
67gb|U44028.1|ATU44028 Arabidopsis thaliana transcription factor C... 42 7.2
68gb|AC166106.3| Mus musculus BAC clone RP23-204F4 from chromosome... 42 7.2

>dbj|AK242387.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J080051E14, full
            insert sequence
          Length = 1448
 Score =  601 bits (303), Expect = e-168
 Identities = 512/579 (88%), Gaps = 2/579 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1125 caggctcccggtcgtcttgttaccatggtgtgaccaggcataggtggagtgggaaatatg 1184
            ||||| ||||||| ||| ||| ||||||||||||||||||||| |||||||| |||||||
Sbjct: 442  caggcacccggtcatctagtttccatggtgtgaccaggcatagatggagtggaaaatatg 501

                                                                        
Query: 1185 aagctcatttgtgggacagtacttgcagagtagaaggacggagaaggaaagggaa-gcaa 1243
            |||||||| ||||||||||| | |||||| | ||||| ||||||| ||||||||| ||||
Sbjct: 502  aagctcatctgtgggacagttcgtgcagaatggaagggcggagaa-gaaagggaaggcaa 560

                                                                        
Query: 1244 gtttatttaggaagttatgatactgagcaaaaagctgccagggcatatgatgttgcagct 1303
            ||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||
Sbjct: 561  gtttatttaggaagttatgataccgaggaaaaagctgccaggtcatatgatgttgcagct 620

                                                                        
Query: 1304 cttaaatactggggactaaatacaaagctgaacttttcgatttcagaatatgaaaaggaa 1363
            |||||||||||||| | ||||||||||||||| || ||| |||||||||| |||| ||||
Sbjct: 621  cttaaatactggggccaaaatacaaagctgaatttctcggtttcagaatacgaaagggaa 680

                                                                        
Query: 1364 ctggcggacatacaagacatgtctccagaggaatgtgtgacatacttgcgaaggaggagc 1423
            |||| |||||||   |||||||||| ||||||||| || |||||| |  |||| || || 
Sbjct: 681  ctggaggacataagggacatgtctcgagaggaatgcgtaacatacctaagaagaagaagt 740

                                                                        
Query: 1424 agctgcttctcaagaggggcttctatttacagaggagttacaaggaggcagaaagatggt 1483
            ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| 
Sbjct: 741  agctgcttctcaagaggggcttctatttatagaggagttactagaaggcagaaagatggg 800

                                                                        
Query: 1484 cgatggcaggcccgcataggactgattgctggaactagagacatttaccttggaactttc 1543
             | |||||||| |||||||||||| |||||||||| |||||||||||||| |||||||||
Sbjct: 801  aggtggcaggcacgcataggactggttgctggaacaagagacatttacctgggaactttc 860

                                                                        
Query: 1544 aaaaccgaggaagaagctgcagaagcatatgatattgctgccattgagatacgtgggaaa 1603
            ||||| ||||||||||| || || || || || |||||||| |||||||| ||||| |||
Sbjct: 861  aaaactgaggaagaagcagcggaggcttacgacattgctgctattgagatccgtggcaaa 920

                                                                        
Query: 1604 aacgcggtgaccaactttgaccgaagcaactacatggacaggggcatgcattgtatagaa 1663
            || ||||||||||||||||| ||||||||||||||||| | ||| ||||| |||||||||
Sbjct: 921  aatgcggtgaccaactttgatcgaagcaactacatggagaagggtatgcactgtatagaa 980

                                                   
Query: 1664 ggggcagggttgaagctgcttgcaacgaagccagaatga 1702
            |||||||| ||||||||||||||  | ||||||||||||
Sbjct: 981  ggggcaggcttgaagctgcttgcgtctaagccagaatga 1019



to top

>gb|AY685114.1| Oryza sativa (japonica cultivar-group) transcription factor AP2D8
            (AP2D8) mRNA, complete cds
          Length = 1104

 Score =  601 bits (303), Expect = e-168
 Identities = 512/579 (88%), Gaps = 2/579 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1125 caggctcccggtcgtcttgttaccatggtgtgaccaggcataggtggagtgggaaatatg 1184
            ||||| ||||||| ||| ||| ||||||||||||||||||||| |||||||| |||||||
Sbjct: 527  caggcacccggtcatctagtttccatggtgtgaccaggcatagatggagtggaaaatatg 586

                                                                        
Query: 1185 aagctcatttgtgggacagtacttgcagagtagaaggacggagaaggaaagggaa-gcaa 1243
            |||||||| ||||||||||| | |||||| | ||||| ||||||| ||||||||| ||||
Sbjct: 587  aagctcatctgtgggacagttcgtgcagaatggaagggcggagaa-gaaagggaaggcaa 645

                                                                        
Query: 1244 gtttatttaggaagttatgatactgagcaaaaagctgccagggcatatgatgttgcagct 1303
            ||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||
Sbjct: 646  gtttatttaggaagttatgataccgaggaaaaagctgccaggtcatatgatgttgcagct 705

                                                                        
Query: 1304 cttaaatactggggactaaatacaaagctgaacttttcgatttcagaatatgaaaaggaa 1363
            |||||||||||||| | ||||||||||||||| || ||| |||||||||| |||| ||||
Sbjct: 706  cttaaatactggggccaaaatacaaagctgaatttctcggtttcagaatacgaaagggaa 765

                                                                        
Query: 1364 ctggcggacatacaagacatgtctccagaggaatgtgtgacatacttgcgaaggaggagc 1423
            |||| |||||||   |||||||||| ||||||||| || |||||| |  |||| || || 
Sbjct: 766  ctggaggacataagggacatgtctcgagaggaatgcgtaacatacctaagaagaagaagt 825

                                                                        
Query: 1424 agctgcttctcaagaggggcttctatttacagaggagttacaaggaggcagaaagatggt 1483
            ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| 
Sbjct: 826  agctgcttctcaagaggggcttctatttatagaggagttactagaaggcagaaagatggg 885

                                                                        
Query: 1484 cgatggcaggcccgcataggactgattgctggaactagagacatttaccttggaactttc 1543
             | |||||||| |||||||||||| |||||||||| |||||||||||||| |||||||||
Sbjct: 886  aggtggcaggcacgcataggactggttgctggaacaagagacatttacctgggaactttc 945

                                                                        
Query: 1544 aaaaccgaggaagaagctgcagaagcatatgatattgctgccattgagatacgtgggaaa 1603
            ||||| ||||||||||| || || || || || |||||||| |||||||| ||||| |||
Sbjct: 946  aaaactgaggaagaagcagcggaggcttacgacattgctgctattgagatccgtggcaaa 1005

                                                                        
Query: 1604 aacgcggtgaccaactttgaccgaagcaactacatggacaggggcatgcattgtatagaa 1663
            || ||||||||||||||||| ||||||||||||||||| | ||| ||||| |||||||||
Sbjct: 1006 aatgcggtgaccaactttgatcgaagcaactacatggagaagggtatgcactgtatagaa 1065

                                                   
Query: 1664 ggggcagggttgaagctgcttgcaacgaagccagaatga 1702
            |||||||| ||||||||||||||  | ||||||||||||
Sbjct: 1066 ggggcaggcttgaagctgcttgcgtctaagccagaatga 1104



to top

>gb|AY109169.1| Zea mays PCO149281 mRNA sequence
          Length = 853

 Score =  480 bits (242), Expect = e-132
 Identities = 431/494 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1206 cttgcagagtagaaggacggagaaggaaagggaagcaagtttatttaggaagttatgata 1265
            ||||||||||||| ||||| |||||||||||||| ||||||||| |||||||||||||||
Sbjct: 15   cttgcagagtagagggacgtagaaggaaagggaaacaagtttatctaggaagttatgata 74

                                                                        
Query: 1266 ctgagcaaaaagctgccagggcatatgatgttgcagctcttaaatactggggactaaata 1325
            | ||| ||||||| |||||||| ||||||||||| ||| |||||||||||||   |||||
Sbjct: 75   ccgaggaaaaagcggccagggcttatgatgttgctgctattaaatactggggcgaaaata 134

                                                                        
Query: 1326 caaagctgaacttttcgatttcagaatatgaaaaggaactggcggacatacaagacatgt 1385
            | |  ||||||||| |||||||| |||| |  |||||  ||| |||||||   ||  |||
Sbjct: 135  ccagactgaactttccgatttcacaatacggcaaggagttggaggacataagggatttgt 194

                                                                        
Query: 1386 ctccagaggaatgtgtgacatacttgcgaaggaggagcagctgcttctcaagaggggctt 1445
            ||| |||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||
Sbjct: 195  ctcgagaggaatgtgtgacatacttgagaaggaggagcagctgcttttcaagaggagctt 254

                                                                        
Query: 1446 ctatttacagaggagttacaaggaggcagaaagatggtcgatggcaggcccgcataggac 1505
            ||||||| |||||||| ||||| ||||||||||| ||  ||||||| || ||||||||||
Sbjct: 255  ctatttatagaggagtgacaagaaggcagaaagacgggagatggcaagcacgcataggac 314

                                                                        
Query: 1506 tgattgctggaactagagacatttaccttggaactttcaaaaccgaggaagaagctgcag 1565
            || ||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||
Sbjct: 315  tggttgctggaactagagacatttacctgggaacattcaaaacagaggaagaagctgcag 374

                                                                        
Query: 1566 aagcatatgatattgctgccattgagatacgtgggaaaaacgcggtgaccaactttgacc 1625
            | || ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||
Sbjct: 375  aggcttatgatattgctgccattgagatacgtggcaaaaacgctgtgaccaattttgacc 434

                                                                        
Query: 1626 gaagcaactacatggacaggggcatgcattgtatagaaggggcagggttgaagctgcttg 1685
            ||||||||||  | || | ||| ||||| ||||||||||| | ||| |||| ||||||||
Sbjct: 435  gaagcaactatgtcgataagggtatgcactgtatagaaggcgaaggcttgaggctgcttg 494

                          
Query: 1686 caacgaagccagaa 1699
            || | |||||||||
Sbjct: 495  catccaagccagaa 508



to top

>ref|NM_001054652.1| Oryza sativa (japonica cultivar-group) Os02g0747600 (Os02g0747600)
            mRNA, complete cds
          Length = 1194

 Score =  474 bits (239), Expect = e-130
 Identities = 398/451 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1252 aggaagttatgatactgagcaaaaagctgccagggcatatgatgttgcagctcttaaata 1311
            ||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 744  aggaagttatgataccgaggaaaaagctgccaggtcatatgatgttgcagctcttaaata 803

                                                                        
Query: 1312 ctggggactaaatacaaagctgaacttttcgatttcagaatatgaaaaggaactggcgga 1371
            |||||| | ||||||||||||||| || ||| |||||||||| |||| |||||||| |||
Sbjct: 804  ctggggccaaaatacaaagctgaatttctcggtttcagaatacgaaagggaactggagga 863

                                                                        
Query: 1372 catacaagacatgtctccagaggaatgtgtgacatacttgcgaaggaggagcagctgctt 1431
            ||||   |||||||||| ||||||||| || |||||| |  |||| || || ||||||||
Sbjct: 864  cataagggacatgtctcgagaggaatgcgtaacatacctaagaagaagaagtagctgctt 923

                                                                        
Query: 1432 ctcaagaggggcttctatttacagaggagttacaaggaggcagaaagatggtcgatggca 1491
            ||||||||||||||||||||| ||||||||||| || ||||||||||||||  | |||||
Sbjct: 924  ctcaagaggggcttctatttatagaggagttactagaaggcagaaagatgggaggtggca 983

                                                                        
Query: 1492 ggcccgcataggactgattgctggaactagagacatttaccttggaactttcaaaaccga 1551
            ||| |||||||||||| |||||||||| |||||||||||||| |||||||||||||| ||
Sbjct: 984  ggcacgcataggactggttgctggaacaagagacatttacctgggaactttcaaaactga 1043

                                                                        
Query: 1552 ggaagaagctgcagaagcatatgatattgctgccattgagatacgtgggaaaaacgcggt 1611
            ||||||||| || || || || || |||||||| |||||||| ||||| ||||| |||||
Sbjct: 1044 ggaagaagcagcggaggcttacgacattgctgctattgagatccgtggcaaaaatgcggt 1103

                                                                        
Query: 1612 gaccaactttgaccgaagcaactacatggacaggggcatgcattgtatagaaggggcagg 1671
            |||||||||||| ||||||||||||||||| | ||| ||||| |||||||||||||||||
Sbjct: 1104 gaccaactttgatcgaagcaactacatggagaagggtatgcactgtatagaaggggcagg 1163

                                           
Query: 1672 gttgaagctgcttgcaacgaagccagaatga 1702
             ||||||||||||||  | ||||||||||||
Sbjct: 1164 cttgaagctgcttgcgtctaagccagaatga 1194



 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 73/82 (89%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1159 caggcataggtggagtgggaaatatgaagctcatttgtgggacagtacttgcagagtaga 1218
            ||||||||| |||||||| ||||||||||||||| ||||||||||| | |||||| | ||
Sbjct: 623  caggcatagatggagtggaaaatatgaagctcatctgtgggacagttcgtgcagaatgga 682

                                  
Query: 1219 aggacggagaaggaaagggaag 1240
            ||| ||||||| ||||||||||
Sbjct: 683  agggcggagaa-gaaagggaag 703



 Score = 42.1 bits (21), Expect = 7.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 1125 caggctcccggtcgtcttgttaccatggtgtgaccag 1161
            ||||| ||||||| ||| ||| |||||||||||||||
Sbjct: 527  caggcacccggtcatctagtttccatggtgtgaccag 563



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score =  155 bits (78), Expect = 7e-34
 Identities = 138/158 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1545     aaaccgaggaagaagctgcagaagcatatgatattgctgccattgagatacgtgggaaaa 1604
                |||| ||||||||||| || || || || || |||||||| |||||||| ||||| ||||
Sbjct: 31428991 aaactgaggaagaagcagcggaggcttacgacattgctgctattgagatccgtggcaaaa 31428932

                                                                            
Query: 1605     acgcggtgaccaactttgaccgaagcaactacatggacaggggcatgcattgtatagaag 1664
                | ||||||||||||||||| ||||||||||||||||| | ||| ||||| ||||||||||
Sbjct: 31428931 atgcggtgaccaactttgatcgaagcaactacatggagaagggtatgcactgtatagaag 31428872

                                                      
Query: 1665     gggcagggttgaagctgcttgcaacgaagccagaatga 1702
                ||||||| ||||||||||||||  | ||||||||||||
Sbjct: 31428871 gggcaggcttgaagctgcttgcgtctaagccagaatga 31428834



 Score =  127 bits (64), Expect = 2e-25
 Identities = 79/84 (94%)
 Strand = Plus / Minus

                                                                            
Query: 1252     aggaagttatgatactgagcaaaaagctgccagggcatatgatgttgcagctcttaaata 1311
                ||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 31429612 aggaagttatgataccgaggaaaaagctgccaggtcatatgatgttgcagctcttaaata 31429553

                                        
Query: 1312     ctggggactaaatacaaagctgaa 1335
                |||||| | |||||||||||||||
Sbjct: 31429552 ctggggccaaaatacaaagctgaa 31429529



 Score = 95.6 bits (48), Expect = 6e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                            
Query: 1469     aggcagaaagatggtcgatggcaggcccgcataggactgattgctggaactagagacatt 1528
                ||||||||||||||  | |||||||| |||||||||||| |||||||||| |||||||||
Sbjct: 31429154 aggcagaaagatgggaggtggcaggcacgcataggactggttgctggaacaagagacatt 31429095

                                
Query: 1529     taccttggaactttca 1544
                ||||| ||||||||||
Sbjct: 31429094 tacctgggaactttca 31429079



 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 73/82 (89%), Gaps = 1/82 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1159     caggcataggtggagtgggaaatatgaagctcatttgtgggacagtacttgcagagtaga 1218
                ||||||||| |||||||| ||||||||||||||| ||||||||||| | |||||| | ||
Sbjct: 31431402 caggcatagatggagtggaaaatatgaagctcatctgtgggacagttcgtgcagaatgga 31431343

                                      
Query: 1219     aggacggagaaggaaagggaag 1240
                ||| ||||||| ||||||||||
Sbjct: 31431342 agggcggagaa-gaaagggaag 31431322



 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                         
Query: 1424     agctgcttctcaagaggggcttctatttacagaggagttac 1464
                ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 31429295 agctgcttctcaagaggggcttctatttatagaggagttac 31429255



 Score = 46.1 bits (23), Expect = 0.46
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 43      caaatcttttcttctccttctcc 65
               |||||||||||||||||||||||
Sbjct: 2096738 caaatcttttcttctccttctcc 2096760



 Score = 44.1 bits (22), Expect = 1.8
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 1125     caggctcccggtcgtcttgttaccatggtgtgaccagg 1162
                ||||| ||||||| ||| ||| ||||||||||||||||
Sbjct: 31431588 caggcacccggtcatctagtttccatggtgtgaccagg 31431551



to top

>dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0024K03
          Length = 119796

 Score =  155 bits (78), Expect = 7e-34
 Identities = 138/158 (87%)
 Strand = Plus / Minus

                                                                          
Query: 1545   aaaccgaggaagaagctgcagaagcatatgatattgctgccattgagatacgtgggaaaa 1604
              |||| ||||||||||| || || || || || |||||||| |||||||| ||||| ||||
Sbjct: 111565 aaactgaggaagaagcagcggaggcttacgacattgctgctattgagatccgtggcaaaa 111506

                                                                          
Query: 1605   acgcggtgaccaactttgaccgaagcaactacatggacaggggcatgcattgtatagaag 1664
              | ||||||||||||||||| ||||||||||||||||| | ||| ||||| ||||||||||
Sbjct: 111505 atgcggtgaccaactttgatcgaagcaactacatggagaagggtatgcactgtatagaag 111446

                                                    
Query: 1665   gggcagggttgaagctgcttgcaacgaagccagaatga 1702
              ||||||| ||||||||||||||  | ||||||||||||
Sbjct: 111445 gggcaggcttgaagctgcttgcgtctaagccagaatga 111408



 Score =  127 bits (64), Expect = 2e-25
 Identities = 79/84 (94%)
 Strand = Plus / Minus

                                                                          
Query: 1252   aggaagttatgatactgagcaaaaagctgccagggcatatgatgttgcagctcttaaata 1311
              ||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 112186 aggaagttatgataccgaggaaaaagctgccaggtcatatgatgttgcagctcttaaata 112127

                                      
Query: 1312   ctggggactaaatacaaagctgaa 1335
              |||||| | |||||||||||||||
Sbjct: 112126 ctggggccaaaatacaaagctgaa 112103



 Score = 95.6 bits (48), Expect = 6e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                          
Query: 1469   aggcagaaagatggtcgatggcaggcccgcataggactgattgctggaactagagacatt 1528
              ||||||||||||||  | |||||||| |||||||||||| |||||||||| |||||||||
Sbjct: 111728 aggcagaaagatgggaggtggcaggcacgcataggactggttgctggaacaagagacatt 111669

                              
Query: 1529   taccttggaactttca 1544
              ||||| ||||||||||
Sbjct: 111668 tacctgggaactttca 111653



 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 73/82 (89%), Gaps = 1/82 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1159   caggcataggtggagtgggaaatatgaagctcatttgtgggacagtacttgcagagtaga 1218
              ||||||||| |||||||| ||||||||||||||| ||||||||||| | |||||| | ||
Sbjct: 113976 caggcatagatggagtggaaaatatgaagctcatctgtgggacagttcgtgcagaatgga 113917

                                    
Query: 1219   aggacggagaaggaaagggaag 1240
              ||| ||||||| ||||||||||
Sbjct: 113916 agggcggagaa-gaaagggaag 113896



 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                       
Query: 1424   agctgcttctcaagaggggcttctatttacagaggagttac 1464
              ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 111869 agctgcttctcaagaggggcttctatttatagaggagttac 111829



 Score = 44.1 bits (22), Expect = 1.8
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 1125   caggctcccggtcgtcttgttaccatggtgtgaccagg 1162
              ||||| ||||||| ||| ||| ||||||||||||||||
Sbjct: 114162 caggcacccggtcatctagtttccatggtgtgaccagg 114125



to top

>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0078N11
          Length = 155168

 Score =  155 bits (78), Expect = 7e-34
 Identities = 138/158 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1545  aaaccgaggaagaagctgcagaagcatatgatattgctgccattgagatacgtgggaaaa 1604
             |||| ||||||||||| || || || || || |||||||| |||||||| ||||| ||||
Sbjct: 64388 aaactgaggaagaagcagcggaggcttacgacattgctgctattgagatccgtggcaaaa 64329

                                                                         
Query: 1605  acgcggtgaccaactttgaccgaagcaactacatggacaggggcatgcattgtatagaag 1664
             | ||||||||||||||||| ||||||||||||||||| | ||| ||||| ||||||||||
Sbjct: 64328 atgcggtgaccaactttgatcgaagcaactacatggagaagggtatgcactgtatagaag 64269

                                                   
Query: 1665  gggcagggttgaagctgcttgcaacgaagccagaatga 1702
             ||||||| ||||||||||||||  | ||||||||||||
Sbjct: 64268 gggcaggcttgaagctgcttgcgtctaagccagaatga 64231



 Score =  127 bits (64), Expect = 2e-25
 Identities = 79/84 (94%)
 Strand = Plus / Minus

                                                                         
Query: 1252  aggaagttatgatactgagcaaaaagctgccagggcatatgatgttgcagctcttaaata 1311
             ||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 65009 aggaagttatgataccgaggaaaaagctgccaggtcatatgatgttgcagctcttaaata 64950

                                     
Query: 1312  ctggggactaaatacaaagctgaa 1335
             |||||| | |||||||||||||||
Sbjct: 64949 ctggggccaaaatacaaagctgaa 64926



 Score = 95.6 bits (48), Expect = 6e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                         
Query: 1469  aggcagaaagatggtcgatggcaggcccgcataggactgattgctggaactagagacatt 1528
             ||||||||||||||  | |||||||| |||||||||||| |||||||||| |||||||||
Sbjct: 64551 aggcagaaagatgggaggtggcaggcacgcataggactggttgctggaacaagagacatt 64492

                             
Query: 1529  taccttggaactttca 1544
             ||||| ||||||||||
Sbjct: 64491 tacctgggaactttca 64476



 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 73/82 (89%), Gaps = 1/82 (1%)
 Strand = Plus / Minus

                                                                         
Query: 1159  caggcataggtggagtgggaaatatgaagctcatttgtgggacagtacttgcagagtaga 1218
             ||||||||| |||||||| ||||||||||||||| ||||||||||| | |||||| | ||
Sbjct: 66799 caggcatagatggagtggaaaatatgaagctcatctgtgggacagttcgtgcagaatgga 66740

                                   
Query: 1219  aggacggagaaggaaagggaag 1240
             ||| ||||||| ||||||||||
Sbjct: 66739 agggcggagaa-gaaagggaag 66719



 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                      
Query: 1424  agctgcttctcaagaggggcttctatttacagaggagttac 1464
             ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 64692 agctgcttctcaagaggggcttctatttatagaggagttac 64652



 Score = 44.1 bits (22), Expect = 1.8
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 1125  caggctcccggtcgtcttgttaccatggtgtgaccagg 1162
             ||||| ||||||| ||| ||| ||||||||||||||||
Sbjct: 66985 caggcacccggtcatctagtttccatggtgtgaccagg 66948



to top

>ref|NM_001064791.1| Oryza sativa (japonica cultivar-group) Os06g0657500 (Os06g0657500)
            mRNA, complete cds
          Length = 1744

 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                      
Query: 1410 tgcgaaggaggagcagctgcttctcaagaggggcttctatttacagaggagttacaag 1467
            |||| |||| ||||||| ||||||||||||||||||| || ||||||||||| |||||
Sbjct: 773  tgcgcaggaagagcagcggcttctcaagaggggcttccatctacagaggagtaacaag 830



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                      
Query: 1415     aggaggagcagctgcttctcaagaggggcttctatttacagaggagttacaagg 1468
                |||| ||||||| ||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 26643781 aggaagagcagcggcttctcaagaggggcttccatctacagaggagtaacaagg 26643834



to top

>dbj|AP005760.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:B1047G05
          Length = 145431

 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                  
Query: 1415 aggaggagcagctgcttctcaagaggggcttctatttacagaggagttacaagg 1468
            |||| ||||||| ||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 1244 aggaagagcagcggcttctcaagaggggcttccatctacagaggagtaacaagg 1297



to top

>dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0677B10
          Length = 134423

 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                   
Query: 1415  aggaggagcagctgcttctcaagaggggcttctatttacagaggagttacaagg 1468
             |||| ||||||| ||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 60211 aggaagagcagcggcttctcaagaggggcttccatctacagaggagtaacaagg 60264



to top

>dbj|AK101959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075O07, full
            insert sequence
          Length = 1745

 Score = 67.9 bits (34), Expect = 1e-07
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                      
Query: 1410 tgcgaaggaggagcagctgcttctcaagaggggcttctatttacagaggagttacaag 1467
            |||| |||| ||||||| ||||||||||||||||||| || ||||||||||| |||||
Sbjct: 774  tgcgcaggaagagcagcggcttctcaagaggggcttccatctacagaggagtaacaag 831



to top

>gb|AY461432.1| Nicotiana tabacum ANT-like protein mRNA, complete cds
          Length = 2546

 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 1553 gaagaagctgcagaagcatatgatattgctgc 1584
            |||||||||||||||||||||||| |||||||
Sbjct: 1684 gaagaagctgcagaagcatatgatgttgctgc 1715



to top

>dbj|AB101585.1| Pinus thunbergii PtANTL1 mRNA for AINTEGUMENTA-like protein, complete
            cds
          Length = 2412

 Score = 56.0 bits (28), Expect = 5e-04
 Identities = 73/88 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1232 aaagggaagcaagtttatttaggaagttatgatactgagcaaaaagctgccagggcatat 1291
            |||||||  ||||||||||| ||| ||||||| |  ||  ||||||| || |||||||||
Sbjct: 776  aaagggagacaagtttatttgggaggttatgacaaagaagaaaaagcagcaagggcatat 835

                                        
Query: 1292 gatgttgcagctcttaaatactggggac 1319
            ||| | ||||||||||| || |||||||
Sbjct: 836  gatttggcagctcttaagtattggggac 863



to top

>gb|DQ666348.1| Medicago truncatula AP2/EREBP transcription factor PLETHORA1 (PLT1)
            mRNA, partial cds
          Length = 544

 Score = 52.0 bits (26), Expect = 0.007
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 1547 accgaggaagaagctgcagaagcatatgatattgctgc 1584
            ||||||||||| ||||||||||||||||| || |||||
Sbjct: 48   accgaggaagaggctgcagaagcatatgacatagctgc 85



to top

>gb|AC183304.14| Medicago truncatula chromosome 8 clone mth2-68f12, complete sequence
          Length = 128668

 Score = 50.1 bits (25), Expect = 0.029
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 1553   gaagaagctgcagaagcatatgatattgc 1581
              ||||| |||||||||||||||||||||||
Sbjct: 122963 gaagaggctgcagaagcatatgatattgc 122935



to top

>gb|AC144645.17| Medicago truncatula clone mth2-11e15, complete sequence
          Length = 124394

 Score = 50.1 bits (25), Expect = 0.029
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 1553  gaagaagctgcagaagcatatgatattgc 1581
             ||||| |||||||||||||||||||||||
Sbjct: 38500 gaagaggctgcagaagcatatgatattgc 38472



to top

>gb|AC135801.24| Medicago truncatula clone mth2-23o16, complete sequence
          Length = 115452

 Score = 50.1 bits (25), Expect = 0.029
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 1553   gaagaagctgcagaagcatatgatattgc 1581
              ||||||||||||||||| |||||||||||
Sbjct: 102098 gaagaagctgcagaagcgtatgatattgc 102126



to top

>emb|Z47554.1|ZMMHCF1 Z.mays mRNA for open reading frame
          Length = 1773

 Score = 48.1 bits (24), Expect = 0.12
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1409 ttgcgaaggaggagcagctgcttctcaagaggggcttctatttacagaggagttacaagg 1468
            ||||| |||| ||||||| |||||||| |||| || || || ||||||||||| ||||||
Sbjct: 753  ttgcgcaggaagagcagcggcttctcacgaggcgcctccatctacagaggagtcacaagg 812



to top

>gb|AY109146.1| Zea mays PCO137288 mRNA sequence
          Length = 1753

 Score = 48.1 bits (24), Expect = 0.12
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1409 ttgcgaaggaggagcagctgcttctcaagaggggcttctatttacagaggagttacaagg 1468
            ||||| |||| ||||||| |||||||| |||| || || || ||||||||||| ||||||
Sbjct: 714  ttgcgcaggaagagcagcggcttctcacgaggcgcctccatctacagaggagtcacaagg 773



to top

>emb|CU179904.1| Medicago truncatula chromosome 5 clone mth2-104i2, COMPLETE SEQUENCE
          Length = 127762

 Score = 46.1 bits (23), Expect = 0.46
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 1430  ttctcaagaggggcttctatttacagaggagttacaagg 1468
             ||||||||||||||||| || || |||||||| ||||||
Sbjct: 67022 ttctcaagaggggcttccatgtatagaggagtaacaagg 67060



to top

>emb|CU013517.1| Medicago truncatula chromosome 5 clone mth2-76o9, COMPLETE SEQUENCE
          Length = 124308

 Score = 46.1 bits (23), Expect = 0.46
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 1430  ttctcaagaggggcttctatttacagaggagttacaagg 1468
             ||||||||||||||||| || || |||||||| ||||||
Sbjct: 82870 ttctcaagaggggcttccatgtatagaggagtaacaagg 82832



to top

>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0026E05
          Length = 159860

 Score = 46.1 bits (23), Expect = 0.46
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 43     caaatcttttcttctccttctcc 65
              |||||||||||||||||||||||
Sbjct: 146946 caaatcttttcttctccttctcc 146968



to top

>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1679_B08
          Length = 142529

 Score = 46.1 bits (23), Expect = 0.46
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 43    caaatcttttcttctccttctcc 65
             |||||||||||||||||||||||
Sbjct: 11431 caaatcttttcttctccttctcc 11453



to top

>dbj|AK101322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034E16, full
           insert sequence
          Length = 2462

 Score = 46.1 bits (23), Expect = 0.46
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 43  caaatcttttcttctccttctcc 65
           |||||||||||||||||||||||
Sbjct: 114 caaatcttttcttctccttctcc 136



to top

>gb|AC126784.11| Medicago truncatula clone mth2-36b12, complete sequence
          Length = 129102

 Score = 46.1 bits (23), Expect = 0.46
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 1180  atatgaagctcatttgtgggaca 1202
             |||||||||||||||||||||||
Sbjct: 61366 atatgaagctcatttgtgggaca 61344



to top

>ref|XM_001032609.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00585030)
            mRNA, complete cds
          Length = 10503

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 1795 tttgctgctgtatgattcttcagatt 1820
            ||||||||||| ||||||||||||||
Sbjct: 1932 tttgctgctgtttgattcttcagatt 1907



to top

>ref|NM_001074253.1| Oryza sativa (japonica cultivar-group) Os11g0295900 (Os11g0295900)
            mRNA, complete cds
          Length = 1695

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                          
Query: 1272 aaaaagctgccagggcatatgatgttgcagctcttaaatactgggg 1317
            |||||||||| ||||| |||||| | || || ||||||||||||||
Sbjct: 647  aaaaagctgctagggcttatgatttggctgcccttaaatactgggg 692



 Score = 42.1 bits (21), Expect = 7.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 1556 gaagctgcagaagcatatgatattgctgc 1584
            ||||||||||| ||||||||||| |||||
Sbjct: 931  gaagctgcagaggcatatgatatcgctgc 959



to top

>gb|AC136501.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0044M15, complete sequence
          Length = 144568

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 1272  aaaaagctgccagggcatatgatgttgcagctcttaaatactgggg 1317
             |||||||||| ||||| |||||| | || || ||||||||||||||
Sbjct: 52473 aaaaagctgctagggcttatgatttggctgcccttaaatactgggg 52428



 Score = 42.1 bits (21), Expect = 7.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 1556  gaagctgcagaagcatatgatattgctgc 1584
             ||||||||||| ||||||||||| |||||
Sbjct: 51223 gaagctgcagaggcatatgatatcgctgc 51195



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                              
Query: 1272     aaaaagctgccagggcatatgatgttgcagctcttaaatactgggg 1317
                |||||||||| ||||| |||||| | || || ||||||||||||||
Sbjct: 10764998 aaaaagctgctagggcttatgatttggctgcccttaaatactgggg 10765043



 Score = 42.1 bits (21), Expect = 7.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 1556     gaagctgcagaagcatatgatattgctgc 1584
                ||||||||||| ||||||||||| |||||
Sbjct: 10766248 gaagctgcagaggcatatgatatcgctgc 10766276



to top

>emb|AL662783.13| Mouse DNA sequence from clone RP23-378N18 on chromosome 11 Contains the
              5' end of a novel gene, a novel gene (4933430M04Rik) and a
              pseudogene similar to part of DEAD (Asp-Glu-Ala-Asp) box
              polypeptide 5 (Ddx5), complete sequence
          Length = 181503

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1829   ttcttccagagagaatttcagt 1850
              ||||||||||||||||||||||
Sbjct: 110134 ttcttccagagagaatttcagt 110155



to top

>gb|AC084427.1|CBRG27P14 Caenorhabditis briggsae cosmid G27P14, complete sequence
          Length = 41724

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1431  tctcaagaggggcttctattta 1452
             ||||||||||||||||||||||
Sbjct: 24957 tctcaagaggggcttctattta 24936



to top

>gb|AC078940.4| Homo sapiens BAC clone RP11-144B8 from 2, complete sequence
          Length = 166315

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1064  gagtatagagaggagaagggcg 1085
             ||||||||||||||||||||||
Sbjct: 77518 gagtatagagaggagaagggcg 77539



to top

>emb|AL359950.4|CNS05TF2 Human chromosome 14 DNA sequence BAC R-566K8 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 194407

 Score = 44.1 bits (22), Expect = 1.8
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1017   atgagcctgaggaaattgttga 1038
              ||||||||||||||||||||||
Sbjct: 162767 atgagcctgaggaaattgttga 162746



to top

>gb|BT029368.1| Arabidopsis thaliana At1g79700 mRNA, complete cds
          Length = 912

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 1160 aggcataggtggagtgggaaatatgaagctcatttgtggga 1200
            |||||||| |||| ||||| ||| ||||| |||||||||||
Sbjct: 172  aggcatagatggactgggagatacgaagcgcatttgtggga 212



to top

>dbj|AK241712.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065197H24, full
            insert sequence
          Length = 2375

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 1157 accaggcataggtggagtgggaaatatga 1185
            |||||||||||||||| ||||| ||||||
Sbjct: 1013 accaggcataggtggactgggagatatga 1041



to top

>ref|NM_001057938.1| Oryza sativa (japonica cultivar-group) Os03g0770700 (Os03g0770700)
            mRNA, complete cds
          Length = 1908

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 1157 accaggcataggtggagtgggaaatatga 1185
            |||||||||||||||| ||||| ||||||
Sbjct: 928  accaggcataggtggactgggagatatga 956



to top

>gb|CP000247.1| Escherichia coli 536, complete genome
          Length = 4938920

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 49      ttttcttctccttctccaccagcga 73
               |||||||||||||||||| ||||||
Sbjct: 2794868 ttttcttctccttctccatcagcga 2794844



to top

>emb|CT027816.9| Zebrafish DNA sequence from clone CH211-190L17 in linkage group 10,
             complete sequence
          Length = 90218

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1358  aaggaactggcggacatacaa 1378
             |||||||||||||||||||||
Sbjct: 40703 aaggaactggcggacatacaa 40683



to top

>ref|NM_106619.2| Arabidopsis thaliana DNA binding / transcription factor (AT1G79700)
            mRNA, complete cds
          Length = 1147

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 1160 aggcataggtggagtgggaaatatgaagctcatttgtggga 1200
            |||||||| |||| ||||| ||| ||||| |||||||||||
Sbjct: 238  aggcatagatggactgggagatacgaagcgcatttgtggga 278



to top

>ref|NM_119937.2| Arabidopsis thaliana ANT (AINTEGUMENTA); DNA binding / transcription
            factor (ANT) mRNA, complete cds
          Length = 2148

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 1529 taccttggaactttcaaaaccgaggaagaagctgcagaagc 1569
            ||||||||||||||   |||| | |||||||||||||||||
Sbjct: 1502 taccttggaacttttggaacccaagaagaagctgcagaagc 1542



to top

>gb|U40256.1|ATU40256 Arabidopsis thaliana ovule development protein (AINTEGUMENTA) mRNA,
            complete cds
          Length = 2148

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 1529 taccttggaactttcaaaaccgaggaagaagctgcagaagc 1569
            ||||||||||||||   |||| | |||||||||||||||||
Sbjct: 1502 taccttggaacttttggaacccaagaagaagctgcagaagc 1542



to top

>gb|AC147050.2| Pan troglodytes BAC clone RP43-138F4 from 7, complete sequence
          Length = 190626

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 826   gaagaatgaggaagttgatga 846
             |||||||||||||||||||||
Sbjct: 62816 gaagaatgaggaagttgatga 62836



to top

>gb|AC121607.2| Mus musculus BAC clone RP23-314P9 from 1, complete sequence
          Length = 158056

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1381  catgtctccagaggaatgtgtgaca 1405
             |||| ||||||||||||||||||||
Sbjct: 21951 catggctccagaggaatgtgtgaca 21927



to top

>gb|AC121593.3| Mus musculus BAC clone RP23-292N18 from 6, complete sequence
          Length = 179881

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1343  atttcagaatatgaaaaggaa 1363
             |||||||||||||||||||||
Sbjct: 99582 atttcagaatatgaaaaggaa 99562



to top

>gb|AC140951.1| Pan troglodytes BAC clone RP43-60K3 from 7, complete sequence
          Length = 165269

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 826  gaagaatgaggaagttgatga 846
            |||||||||||||||||||||
Sbjct: 8435 gaagaatgaggaagttgatga 8455



to top

>gb|AC148300.3| Pan troglodytes BAC clone CH251-64B13 from chromosome 7, complete
             sequence
          Length = 173568

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 826   gaagaatgaggaagttgatga 846
             |||||||||||||||||||||
Sbjct: 62793 gaagaatgaggaagttgatga 62813



to top

>gb|AY117207.1| Arabidopsis thaliana putative ovule development protein aintegumenta
            (At4g37750) mRNA, complete cds
          Length = 1699

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 1529 taccttggaactttcaaaaccgaggaagaagctgcagaagc 1569
            ||||||||||||||   |||| | |||||||||||||||||
Sbjct: 1234 taccttggaacttttggaacccaagaagaagctgcagaagc 1274



to top

>gb|AY080706.1| Arabidopsis thaliana putative ovule development protein aintegumenta
            (At4g37750) mRNA, complete cds
          Length = 2056

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 1529 taccttggaactttcaaaaccgaggaagaagctgcagaagc 1569
            ||||||||||||||   |||| | |||||||||||||||||
Sbjct: 1391 taccttggaacttttggaacccaagaagaagctgcagaagc 1431



to top

>gb|AC115112.5| Homo sapiens BAC clone RP11-427M12 from 4, complete sequence
          Length = 142494

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1033 tgttgattctattaatcctgt 1053
            |||||||||||||||||||||
Sbjct: 6550 tgttgattctattaatcctgt 6530



to top

>gb|AC149329.2| Phakopsora pachyrhizi clone JGIAFNA-13C17, complete sequence
          Length = 39794

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 267   tatttccccttttgctttctt 287
             |||||||||||||||||||||
Sbjct: 35557 tatttccccttttgctttctt 35577



to top

>emb|AJ421478.1| Mus musculus X-inactivation center region; segment 1/3
          Length = 247850

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1308   aatactggggactaaatacaa 1328
              |||||||||||||||||||||
Sbjct: 123121 aatactggggactaaatacaa 123101



to top

>gb|AC087072.2|AC087072 Homo sapiens chromosome 7 clone RP11-609L3, complete sequence
          Length = 150856

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 826    gaagaatgaggaagttgatga 846
              |||||||||||||||||||||
Sbjct: 148203 gaagaatgaggaagttgatga 148183



to top

>gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19K16 genomic sequence, complete
              sequence
          Length = 111301

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 1160   aggcataggtggagtgggaaatatgaagctcatttgtggga 1200
              |||||||| |||| ||||| ||| ||||| |||||||||||
Sbjct: 110774 aggcatagatggactgggagatacgaagcgcatttgtggga 110814



to top

>gb|AC083864.2|AC083864 Homo sapiens chromosome 7 clone RP11-196O2, complete sequence
          Length = 156064

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 826    gaagaatgaggaagttgatga 846
              |||||||||||||||||||||
Sbjct: 118880 gaagaatgaggaagttgatga 118900



to top

>dbj|AK117366.1| Arabidopsis thaliana mRNA for unknown protein, complete cds, clone:
            RAFL16-93-K12
          Length = 755

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 1160 aggcataggtggagtgggaaatatgaagctcatttgtggga 1200
            |||||||| |||| ||||| ||| ||||| |||||||||||
Sbjct: 215  aggcatagatggactgggagatacgaagcgcatttgtggga 175



to top

>dbj|AK117300.1| Arabidopsis thaliana mRNA for unknown protein, complete cds, clone:
            RAFL16-86-I04
          Length = 2045

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 1160 aggcataggtggagtgggaaatatgaagctcatttgtggga 1200
            |||||||| |||| ||||| ||| ||||| |||||||||||
Sbjct: 238  aggcatagatggactgggagatacgaagcgcatttgtggga 278



to top

>emb|BX826541.1|CNS0A4GJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB37ZE02 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 2106

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 1529 taccttggaactttcaaaaccgaggaagaagctgcagaagc 1569
            ||||||||||||||   |||| | |||||||||||||||||
Sbjct: 1495 taccttggaacttttggaacccaagaagaagctgcagaagc 1535



to top

>gb|AC156989.3| Mus musculus chromosome 1, clone RP23-379L2, complete sequence
          Length = 188691

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 1229   aggaaagggaagcaagtttatttag 1253
              |||||||||||||||||| ||||||
Sbjct: 101305 aggaaagggaagcaagttcatttag 101281



to top

>gb|AC010793.3|AC010793 Genomic sequence for Arabidopsis thaliana BAC F20B17 from chromosome I,
             complete sequence
          Length = 90149

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 1160  aggcataggtggagtgggaaatatgaagctcatttgtggga 1200
             |||||||| |||| ||||| ||| ||||| |||||||||||
Sbjct: 56055 aggcatagatggactgggagatacgaagcgcatttgtggga 56015



to top

>gb|AC011362.2|AC011362 Homo sapiens chromosome 5 clone CTC-503K11, complete sequence
          Length = 176029

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 51    ttcttctccttctccaccagc 71
             |||||||||||||||||||||
Sbjct: 44336 ttcttctccttctccaccagc 44356



to top

>emb|AJ580379.1|ATH580379 Arabidopsis thaliana mRNA for putative AP2 domain transcription
            factor, clone At1g79700-like
          Length = 912

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 1160 aggcataggtggagtgggaaatatgaagctcatttgtggga 1200
            |||||||| |||| ||||| ||| ||||| |||||||||||
Sbjct: 172  aggcatagatggactgggagatacgaagcgcatttgtggga 212



to top

>gb|AY685120.1| Oryza sativa (japonica cultivar-group) transcription factor AP2D17
            (AP2D17) mRNA, partial cds
          Length = 364

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 1556 gaagctgcagaagcatatgatattgctgc 1584
            ||||||||||| ||||||||||| |||||
Sbjct: 255  gaagctgcagaggcatatgatatcgctgc 283



to top

>emb|AL929540.9| Mouse DNA sequence from clone RP23-132M12 on chromosome X, complete
             sequence
          Length = 145087

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1141  ttgttaccatggtgtgaccag 1161
             |||||||||||||||||||||
Sbjct: 68368 ttgttaccatggtgtgaccag 68388



to top

>gb|U41339.1|ATU41339 Arabidopsis thaliana ANT (AINTEGUMENTA) mRNA, complete cds
          Length = 1905

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 1529 taccttggaactttcaaaaccgaggaagaagctgcagaagc 1569
            ||||||||||||||   |||| | |||||||||||||||||
Sbjct: 1271 taccttggaacttttggaacccaagaagaagctgcagaagc 1311



to top

>emb|AL671187.9| Mouse DNA sequence from clone RP23-273N4 on chromosome X, complete
             sequence
          Length = 205749

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1308  aatactggggactaaatacaa 1328
             |||||||||||||||||||||
Sbjct: 47693 aatactggggactaaatacaa 47713



to top

>gb|U44028.1|ATU44028 Arabidopsis thaliana transcription factor CKC mRNA, complete cds
          Length = 1955

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 1529 taccttggaactttcaaaaccgaggaagaagctgcagaagc 1569
            ||||||||||||||   |||| | |||||||||||||||||
Sbjct: 1309 taccttggaacttttggaacccaagaagaagctgcagaagc 1349



to top

>gb|AC166106.3| Mus musculus BAC clone RP23-204F4 from chromosome 14, complete sequence
          Length = 191630

 Score = 42.1 bits (21), Expect = 7.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1190   catttgtgggacagtacttgc 1210
              |||||||||||||||||||||
Sbjct: 115625 catttgtgggacagtacttgc 115645


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 329,600,657
Number of extensions: 17228503
Number of successful extensions: 388505
Number of sequences better than 10.0: 68
Number of HSP's gapped: 388503
Number of HSP's successfully gapped: 89
Length of query: 1874
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1851
Effective length of database: 18,503,978,556
Effective search space: 34250864307156
Effective search space used: 34250864307156
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top