ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf179o12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK068085:Os05g0170800 168 2e-41
2AK099711:Os10g0183900 32 3.1
3AK072957:Os10g0183900 32 3.1

>AK068085:Os05g0170800 |
          Length = 300
 Score =  168 bits (425), Expect = 2e-41
 Identities = 86/116 (74%), Positives = 89/116 (76%)
 Frame = +1

Query: 1660 GIRVQVRSVYIESRSQPLKGKFFFAYRIRITNNSQRAVQLLRRHWIVTDANGRTENVWLV 1839
            GIRVQVRSVYIESRSQPLKG+FFFAYRIRITNNSQR VQLLRRHWIVTDANGRTEN+W  
Sbjct: 173  GIRVQVRSVYIESRSQPLKGQFFFAYRIRITNNSQRPVQLLRRHWIVTDANGRTENIW-- 230

Query: 1840 FVI*SPYCNYLKQNTNKTCSILVRGVGVVGEQPVIFPKTGFEYSSACPLNTPNGRM 2007
                                    GVGVVGEQPVIFP+TGFEYSSACPLNTPNGRM
Sbjct: 231  ------------------------GVGVVGEQPVIFPRTGFEYSSACPLNTPNGRM 262



 Score = 71.6 bits (174), Expect(2) = 7e-19
 Identities = 36/44 (81%), Positives = 39/44 (88%)
 Frame = +1

Query: 154 QDYKEAARLRDSLRLFEEEEPVLRLRRSLKKAVEEERFAVGALF 285
           +DYKEAARLRDSL+ FEEEEPVLRLRRSLKKAVEEERF   A +
Sbjct: 107 EDYKEAARLRDSLKSFEEEEPVLRLRRSLKKAVEEERFEDAAKY 150



 Score = 42.4 bits (98), Expect(2) = 7e-19
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = +2

Query: 2   ADFLLRSQKYAMLKQQLAVAAQLE 73
           A FL+RSQKYAMLKQQLAVAAQ E
Sbjct: 84  AAFLMRSQKYAMLKQQLAVAAQFE 107



 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 34/42 (80%), Positives = 36/42 (85%)
 Frame = +1

Query: 2242 LNKCSELQEGDFEMKHIDKVGSSTFNIAIAPFSLSILGDDND 2367
            LN  +   EGDFEMKHIDK GSSTFN+AIAPFSLSILGDDND
Sbjct: 255  LNTPNGRMEGDFEMKHIDKAGSSTFNVAIAPFSLSILGDDND 296



 Score = 55.1 bits (131), Expect = 3e-07
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = +1

Query: 691 FQDAAKYRDELMILAPHSLLKCSSDATT 774
           F+DAAKYRDEL ILAPH+LLKCSSDATT
Sbjct: 144 FEDAAKYRDELKILAPHALLKCSSDATT 171



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>AK099711:Os10g0183900 |
          Length = 364

 Score = 31.6 bits (70), Expect = 3.1
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = -2

Query: 828 KDNKVAELVELFN*KKYQSCSITRTFEEGVRSQNHQFISVLGSILKSMSAEKKYEH 661
           K  +V EL+E  N K  QS  +T   E+G    +   +++L S++  M+ E  YE+
Sbjct: 248 KQKRVLELLEK-NYKTMQSLQLTSDAEKGEEKMSPDDVALLSSMVDDMNMESSYEN 302



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>AK072957:Os10g0183900 |
          Length = 364

 Score = 31.6 bits (70), Expect = 3.1
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = -2

Query: 828 KDNKVAELVELFN*KKYQSCSITRTFEEGVRSQNHQFISVLGSILKSMSAEKKYEH 661
           K  +V EL+E  N K  QS  +T   E+G    +   +++L S++  M+ E  YE+
Sbjct: 248 KQKRVLELLEK-NYKTMQSLQLTSDAEKGEEKMSPDDVALLSSMVDDMNMESSYEN 302


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 70,987,472
Number of extensions: 1533360
Number of successful extensions: 3176
Number of sequences better than 10.0: 3
Number of HSP's gapped: 3175
Number of HSP's successfully gapped: 7
Length of query: 912
Length of database: 15,399,855
Length adjustment: 110
Effective length of query: 802
Effective length of database: 10,995,345
Effective search space: 8818266690
Effective search space used: 8818266690
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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