ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf179j03 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os04g55040:12004.t04977:unspliced-genomic vacuolar ATP synthase subunit D 1, putative, expressed| Length = 2931 Score = 177 bits (382), Expect(3) = 4e-55 Identities = 73/92 (79%), Positives = 86/92 (93%) Frame = +1 / +1 Query: 1 NVVKPRLENTITYIKGELDELEREDFFRLKKIQGYKRREVERQMMAARLFAEEQLAEDLA 180 NVVKPRLENTI+YIKGELDELEREDFFRLKKIQGYK+RE+ERQM AA+ FAEEQLAE++A Sbjct: 775 NVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQMAAAKQFAEEQLAEEVA 954 Query: 181 LKRGVSMGATTNILVGGGDKDEDIIF*SDLIV 276 LKRG+S+GA TN+LV GG++DEDIIF*S ++ Sbjct: 955 LKRGISVGAATNMLVAGGERDEDIIF*SSSVI 1050 Score = 57.4 bits (119), Expect(3) = 4e-55 Identities = 21/26 (80%), Positives = 23/26 (88%) Frame = +1 / +2 Query: 439 VDTISCGAGAPEWHLFIEWRRFCFRQ 516 V+ ISC AGAPE HLFIEWRRFCFR+ Sbjct: 2531 VEIISCDAGAPESHLFIEWRRFCFRR 2608 Score = 26.7 bits (52), Expect(3) = 4e-55 Identities = 14/48 (29%), Positives = 22/48 (45%) Frame = +3 / +2 Query: 603 WLCAVVNSFVLYFISLHARFSYIYIYSDIVYLDFGLLSGCVHYVFLEG 746 ++C+ + F H RFSYI+++ + L F L VF G Sbjct: 2678 FMCSFRS*FNWAVFLCHVRFSYIFVWKGVR*LGFRKLKLQTRSVFRSG 2821 Score = 58.3 bits (121), Expect(3) = 3e-18 Identities = 24/36 (66%), Positives = 27/36 (75%) Frame = -2 / -1 Query: 512 LKQNLRHSINRCHSGAPAPQLIVSTAWQKCTSTPAF 405 LKQNLRHSINRC SGAPA QLI+ST ++ S F Sbjct: 2604 LKQNLRHSINRCDSGAPASQLIISTTAKRSNSVKTF 2497 Score = 42.3 bits (86), Expect(3) = 3e-18 Identities = 22/40 (55%), Positives = 23/40 (57%) Frame = -2 / -2 Query: 122 STSLLL*PWIFXXXXXXXXXXXXXSPLMYVMVFSSLGLTT 3 S SL L*PWIF SPLM +MVFSSLG TT Sbjct: 896 SISLFL*PWIFLSLKKSSRSSSSSSPLM*LMVFSSLGFTT 777 Score = 36.3 bits (73), Expect(3) = 3e-18 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = -1 / -1 Query: 261 SEDDVFVLVAAANQYVGRGPHGDAP 187 SEDDVFV ++ NQ+VG H D P Sbjct: 1035 SEDDVFVPLSTGNQHVGGSTHRDTP 961 Score = 53.3 bits (110), Expect(3) = 2e-10 Identities = 23/31 (74%), Positives = 25/31 (80%) Frame = +3 / +1 Query: 423 AFLPCGGHNKLWCWSPRMASVYRVAEVLFQA 515 A L GG+NKL CWS R+A VYRVAEVLFQA Sbjct: 2515 ASLCSGGNNKL*CWSSRIAPVYRVAEVLFQA 2607 Score = 29.0 bits (57), Expect(3) = 2e-10 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = +3 / +3 Query: 90 EDPGLQEEGGRAPD 131 EDPGLQEEG R D Sbjct: 864 EDPGLQEEGDREAD 905 Score = 27.2 bits (53), Expect(3) = 2e-10 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +3 / +3 Query: 180 PQEGRLHGGHDQHTGWRRRQG 242 PQEG L G QH G R R+G Sbjct: 954 PQEGYLCGCCHQHVGCRWREG 1016 Score = 54.2 bits (112), Expect = 1e-06 Identities = 20/29 (68%), Positives = 21/29 (72%) Frame = -1 / -3 Query: 513 PETKPPPLYKQMPFWGSSTTTYCVHRMAE 427 PETKPPPLYKQ+ FW SS TTY H E Sbjct: 2605 PETKPPPLYKQVRFWSSSITTYYFHHCKE 2519 Score = 52.4 bits (108), Expect = 4e-06 Identities = 25/31 (80%), Positives = 25/31 (80%) Frame = -3 / -2 Query: 514 A*NKTSATL*TDAILGLQHHNLLCPPHGRNA 422 A*NKTSATL*T AIL LQHHNLL PP R A Sbjct: 2606 A*NKTSATL*TGAILELQHHNLLFPPLQREA 2514 Score = 46.4 bits (95), Expect = 3e-04 Identities = 21/31 (67%), Positives = 22/31 (70%) Frame = +2 / +3 Query: 422 CISAMRWTQ*VVVLEPQNGICL*SGGGFVSG 514 C S W *VV+LE QN CL*SGGGFVSG Sbjct: 2514 CFSLQWWK**VVMLELQNRTCL*SGGGFVSG 2606
>LOC_Os10g04110:12010.t00300:unspliced-genomic MLA6 protein, putative, expressed| Length = 4737 Score = 32.7 bits (65), Expect(2) = 0.45 Identities = 9/30 (30%), Positives = 20/30 (66%) Frame = +1 / -3 Query: 622 ILLYCISFPCTLALVTYIFIQTLCIWILAC 711 +L++CI F +L+ +++ ++ C W L+C Sbjct: 2950 LLIFCILFSISLSAFSHVILKGSCAWKLSC 2861 Score = 25.4 bits (49), Expect(2) = 0.45 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +3 / -3 Query: 279 PCSPIIIQSEQHRATLFPLLSVTC 350 PC PI++ H + F LLS C Sbjct: 3772 PCFPILLPYSIHSFSPFLLLSALC 3701
>LOC_Os02g52170:12002.t04798:unspliced-genomic expressed protein| Length = 1034 Score = 35.0 bits (70), Expect = 0.72 Identities = 17/38 (44%), Positives = 20/38 (52%) Frame = -3 / +2 Query: 445 CPPHGRNARLLRPSLAFQQGRARIPFLGRPRQQVTLRR 332 CPP R R RPS A ++ R R R R+ TLRR Sbjct: 215 CPPRRRRRRRCRPSCAARRRRRRPAARRRVRRPATLRR 328
>LOC_Os05g01200:12005.t00024:unspliced-genomic exonuclease, putative, expressed| Length = 1058 Score = 34.1 bits (68), Expect = 1.4 Identities = 18/46 (39%), Positives = 20/46 (43%) Frame = -3 / +2 Query: 469 GLQHHNLLCPPHGRNARLLRPSLAFQQGRARIPFLGRPRQQVTLRR 332 G QH L PPH R R R A +G R+P PR RR Sbjct: 572 GAQHPALRLPPHPRGVRGHRAGSAGARGHRRLPQRAGPRLWAPRRR 709
>LOC_Os06g02750:12006.t00168:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4298 Score = 33.6 bits (67), Expect = 1.9 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = +2 / -3 Query: 653 RSL*LHIYLFRHCVSGFWLAFWLCALCILGGK 748 ++L L +YL RH G+WL + L LCIL K Sbjct: 1389 KALNLPVYLPRHGRGGYWLPWSLDGLCILQDK 1294
>LOC_Os01g02680:12001.t00161:unspliced-genomic TAK33, putative, expressed| Length = 2512 Score = 33.6 bits (67), Expect = 1.9 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +3 / +2 Query: 174 SRPQEGRLHGGHDQHTGWRRRQG 242 +RPQE RLHG H H ++R+ G Sbjct: 1358 ARPQEVRLHGHHSNHKPFQRQAG 1426
>LOC_Os01g38520:12001.t03388:unspliced-genomic expressed protein| Length = 1483 Score = 28.1 bits (55), Expect(2) = 2.3 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = -2 / +2 Query: 485 NRCHSGAPAPQLIVSTAWQKCTSTPAFPCFSAR 387 +R S AP P A STPA C SAR Sbjct: 470 SRSASAAPTPSSTSPAATAAAPSTPAACCLSAR 568 Score = 25.8 bits (50), Expect(2) = 2.3 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -2 / +1 Query: 581 WFPKYRREIILCLGPQIRL 525 W+ RRE +LC+G + L Sbjct: 205 WYYSPRREAVLCIGDDLAL 261
>LOC_Os04g02830:12004.t00177:unspliced-genomic expressed protein| Length = 2076 Score = 33.1 bits (66), Expect = 2.6 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +2 / +2 Query: 668 HIYLFRHCVSGFWLAFWLC 724 H YL+R C+ FW F+LC Sbjct: 1589 HCYLYR*CIMIFWYGFYLC 1645
>LOC_Os03g37720:12003.t03224:unspliced-genomic NBS-LRR type disease resistance protein Rps1-k-1, putative| Length = 3801 Score = 33.1 bits (66), Expect = 2.6 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = -2 / -2 Query: 566 RREIILCLGPQIRLHTACLKQNLRHSINRCHSGAPAPQLIVSTAWQKCTSTP 411 + I + P+ A LK + R+SIN A ++IV W+KC S P Sbjct: 1985 KNAIFAYVTPRTLTSFATLKISARNSINSSELLKSAKKIIVRIRWRKCWSDP 1830
>LOC_Os05g11370:12005.t00969:unspliced-genomic expressed protein| Length = 3589 Score = 26.3 bits (51), Expect(2) = 3.4 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = +1 / +3 Query: 673 IFIQTLCIWILACFLVVCI 729 +F TLCI++++ F CI Sbjct: 1980 LFFSTLCIYVISLFPSTCI 2036 Score = 23.5 bits (45), Expect(2) = 3.4 Identities = 7/18 (38%), Positives = 11/18 (61%) Frame = +3 / +3 Query: 537 WPKTQNNLSSVLWKPNIC 590 W +NNLS+ +W + C Sbjct: 1818 WVAFRNNLSNTMWDEH*C 1871
>LOC_Os05g09460:12005.t00822:unspliced-genomic hypothetical protein| Length = 2265 Score = 27.6 bits (54), Expect(2) = 3.4 Identities = 10/38 (26%), Positives = 21/38 (55%) Frame = -2 / -2 Query: 668 VTKASVQGNEIQYKRIYYCT*PLVSPANVWFPKYRREI 555 ++K +V NE+ + + PL+ + VW P +R ++ Sbjct: 1862 MSKRNVNVNELSWPNMQVMPLPLLCCSKVWTPTHRNKV 1749 Score = 26.3 bits (51), Expect(2) = 3.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -1 / -1 Query: 498 PPLYKQMPFWGSSTTTYCVHRMAEM 424 P LYK + F STTT +H A++ Sbjct: 612 PKLYKTVQFRFHSTTTV*IHSFADV 538
>LOC_Os06g44374:12006.t04898:unspliced-genomic protein transport protein SEC61 gamma subunit, putative, expressed| Length = 2019 Score = 29.9 bits (59), Expect(2) = 4.1 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 / +2 Query: 606 LCAVVNSFVLYFISLHARFSYIYIYSDI 689 LC +V V + HA FS+ YI+SD+ Sbjct: 1418 LCDLVTRSVFIPLPTHAIFSFSYIFSDV 1501 Score = 23.5 bits (45), Expect(2) = 4.1 Identities = 6/18 (33%), Positives = 11/18 (61%) Frame = +2 / +2 Query: 197 PWGPRPTYWLAAATRTKT 250 PW P +W+ +A+ +T Sbjct: 86 PWTPSTPWWIPSASSPRT 139
>LOC_Os02g40310:12002.t03667:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2879 Score = 30.9 bits (61), Expect(2) = 4.2 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = -1 / +2 Query: 618 LLHIATSFTSKCLVSKVQKRDYFVSWATNQAAHSLPETKP 499 L + S + CL+S Q F+ WA++ A+ S T+P Sbjct: 1181 LSELIISVLNSCLISVWQPSPNFIGWASSSASTSR*STRP 1300 Score = 23.1 bits (44), Expect(2) = 4.2 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = -2 / +2 Query: 497 RHSINRCHSGAPAP 456 R RCH GAP P Sbjct: 2795 RRGGERCHVGAPLP 2836
>LOC_Os05g08810:12005.t00758:unspliced-genomic phosphatidylinositol 3-kinase, root isoform, putative, expressed| Length = 11505 Score = 29.9 bits (59), Expect(2) = 4.2 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = +1 / +2 Query: 646 PCTLALVTYIFIQTLCIWILACFLVVCIMYS 738 P LA + Y ++C W+ CFL M+S Sbjct: 3698 PRLLARL*YCMKSSICFWVRMCFLTFYTMFS 3790 Score = 25.8 bits (50), Expect(2) = 4.2 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +3 / +1 Query: 411 RSRRAFLPCGGHNKLWCWSP 470 +SR + P G + WCW+P Sbjct: 217 KSRTSASPKQGPGRGWCWTP 276
>LOC_Os11g17770:12011.t01553:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6635 Score = 32.2 bits (64), Expect = 4.8 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +3 / -1 Query: 291 IIIQSEQHRATLFPLLSVTCCLGLP 365 II + QH T F +LS CC G+P Sbjct: 4385 IIHRCRQHPWTTFSILSFNCCFGIP 4311
>LOC_Os10g35294:12010.t02825:unspliced-genomic fiber protein Fb34, putative, expressed| Length = 3201 Score = 32.2 bits (64), Expect = 4.8 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +3 / +1 Query: 174 SRPQEGRLHGGHDQHTGWRRRQ 239 +RP GRLH G +H G RRR+ Sbjct: 94 ARPHHGRLHQGAGRHPGRRRRR 159
>LOC_Os07g40630:12007.t03722:unspliced-genomic BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed| Length = 4031 Score = 32.2 bits (64), Expect = 4.8 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = -3 / +3 Query: 439 PHGRNARLLRPSLAFQQGRARIPFLGRPRQQV 344 PH R AR LRP A R R P GR R ++ Sbjct: 762 PHRRGARRLRPDQAAHARRVREPVRGRRRGEL 857
>LOC_Os04g38530:12004.t03424:unspliced-genomic aldose 1-epimerase precursor, putative, expressed| Length = 4882 Score = 32.2 bits (64), Expect = 4.8 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = -3 / +2 Query: 442 PPHGRNARLLRPSLAFQQGRARIPFLGRPRQ 350 P R+ LRP A +GRAR P GRP+Q Sbjct: 4310 PGRARHRHALRPPRADARGRARPPGDGRPQQ 4402
>LOC_Os05g34340:12005.t03028:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1583 Score = 32.2 bits (64), Expect = 4.8 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -1 / -3 Query: 558 DYFVSWATNQAAHSLPETKPPPL 490 DY V + N +AH+ P+TKP PL Sbjct: 1119 DYGVGYLHNSSAHTEPQTKPYPL 1051
>LOC_Os01g32750:12001.t02847:unspliced-genomic TBP-associated 59 kDa subunit protein, putative, expressed| Length = 7738 Score = 32.2 bits (64), Expect = 4.8 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = -1 / -3 Query: 585 CLVSKVQKRDYFVSWATNQA 526 CL+SKVQK Y + W T++A Sbjct: 7715 CLISKVQKCTYAIKWRTSRA 7656
>LOC_Os05g22650:12005.t01925:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6234 Score = 28.6 bits (56), Expect(2) = 6.0 Identities = 12/35 (34%), Positives = 15/35 (42%) Frame = -3 / +3 Query: 475 ILGLQHHNLLCPPHGRNARLLRPSLAFQQGRARIP 371 +LG Q HN + P GRN + GR P Sbjct: 4299 LLGSQSHNAIAVPFGRNTEARKLLAGSASGRQNYP 4403 Score = 25.8 bits (50), Expect(2) = 6.0 Identities = 8/35 (22%), Positives = 19/35 (54%) Frame = -1 / +3 Query: 804 PAKIQNLVLFCLKP*CNNYFPPRIHNAHNQKASQN 700 P ++Q + C+ +YFPP++ A + + ++ Sbjct: 2787 PVQLQRHLRSCILEQVQSYFPPQLSQAQDARPGES 2891
>LOC_Os12g34550:12012.t03143:unspliced-genomic ribosomal protein S15 containing protein| Length = 2543 Score = 31.8 bits (63), Expect = 6.6 Identities = 15/38 (39%), Positives = 17/38 (44%) Frame = -3 / -3 Query: 811 YFTCKNSELGVILFKAVMQQLFPSKNT*CTQPESKPKS 698 YF+ N V +F V LFP KN C P K S Sbjct: 2514 YFSLPNKPANVDVFPKVFGDLFPMKNLFCVIPNVKQVS 2401
>LOC_Os12g10580:12012.t00935:unspliced-genomic ribulose bisphosphate carboxylase large chain precursor, putative| Length = 3916 Score = 31.8 bits (63), Expect = 6.6 Identities = 15/38 (39%), Positives = 17/38 (44%) Frame = -3 / -3 Query: 811 YFTCKNSELGVILFKAVMQQLFPSKNT*CTQPESKPKS 698 YF+ N V +F V LFP KN C P K S Sbjct: 3866 YFSLPNKPANVDVFPKVFGDLFPMKNLFCVIPNVKQVS 3753
>LOC_Os10g34480:12010.t02744:unspliced-genomic cytochrome P450 86A2, putative, expressed| Length = 4422 Score = 31.8 bits (63), Expect = 6.6 Identities = 15/30 (50%), Positives = 20/30 (66%) Frame = -3 / +1 Query: 421 RLLRPSLAFQQGRARIPFLGRPRQQVTLRR 332 R+ R + A ++ RAR P L R R+QV LRR Sbjct: 889 RVARHARARRRARARAPALARRRRQVRLRR 978
>LOC_Os06g35814:12006.t03278:unspliced-genomic ras-related protein RIC2, putative, expressed| Length = 5689 Score = 31.8 bits (63), Expect = 6.6 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +2 / +3 Query: 689 CVSGFWLAFWLC 724 C+S FW+ FWLC Sbjct: 2100 CISSFWVKFWLC 2135
>LOC_Os05g43030:12005.t03796:unspliced-genomic expressed protein| Length = 2512 Score = 31.8 bits (63), Expect = 6.6 Identities = 13/44 (29%), Positives = 18/44 (40%) Frame = +2 / +3 Query: 602 VAMCSSKFFCTVFHFPARSL*LHIYLFRHCVSGFWLAFWLCALC 733 + +C C H SL* + HC+ + WL ALC Sbjct: 153 LGICQCCCHCRCHHHHTSSL*TSLLFSEHCLVASYTLAWLLALC 284
>LOC_Os04g16720:12004.t01430:unspliced-genomic ribosomal protein S15 containing protein| Length = 3860 Score = 31.8 bits (63), Expect = 6.6 Identities = 15/38 (39%), Positives = 17/38 (44%) Frame = -3 / -2 Query: 811 YFTCKNSELGVILFKAVMQQLFPSKNT*CTQPESKPKS 698 YF+ N V +F V LFP KN C P K S Sbjct: 2218 YFSLPNKPANVDVFPKVFGDLFPMKNLFCVIPNVKQVS 2105
>LOC_Os12g12080:12012.t01078:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 13894 Score = 31.8 bits (63), Expect = 6.7 Identities = 7/31 (22%), Positives = 20/31 (64%) Frame = +1 / +1 Query: 622 ILLYCISFPCTLALVTYIFIQTLCIWILACF 714 +L++ + C +L ++IF++ + W++ C+ Sbjct: 7195 VLMFVLQLACCFSLFSFIFLKYVYSWLIVCY 7287
>LOC_Os07g32900:12007.t02971:unspliced-genomic rf1 protein, mitochondrial precursor, putative, expressed| Length = 4827 Score = 31.8 bits (63), Expect = 6.7 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +1 / +3 Query: 676 FIQTLCIWILACFLVVCIMY 735 ++ LC+ ILACF+V C+ Y Sbjct: 4083 YVLELCL*ILACFIVPCVAY 4142
>LOC_Os02g58180:12002.t005566:unspliced-genomic expressed protein| Length = 1886 Score = 31.8 bits (63), Expect = 6.7 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +1 / -1 Query: 700 ILACFLVVCIMYSWREIVVALRL 768 +LAC LV C +SWR+ V L++ Sbjct: 449 VLACLLVCCTSHSWRQSHVQLQM 381
>LOC_Os02g10690:12002.t00917:unspliced-genomic seed specific protein Bn15D14A, putative, expressed| Length = 4022 Score = 31.8 bits (63), Expect = 6.7 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +1 / +3 Query: 523 CSLICGPRHKIISLLYFGNQTFA 591 C+L+CGP + +SL + GN+ A Sbjct: 153 CALLCGPSRRRLSLAFLGNRFLA 221
>LOC_Os01g12260:12001.t01094:unspliced-genomic vacuolar ATP synthase subunit E, putative, expressed| Length = 3910 Score = 31.8 bits (63), Expect = 6.7 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +1 / +3 Query: 622 ILLYCISFPCTLALVTYIFIQTLCI 696 + L CI+F CTL L Y ++ +CI Sbjct: 2598 VYLECINFRCTLLLYYYEYLYAICI 2672
>LOC_Os01g08560:12001.t00734:unspliced-genomic heat shock 70 kDa protein 4, putative, expressed| Length = 5789 Score = 31.8 bits (63), Expect = 6.7 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = +1 / -1 Query: 511 RQAVCSLICGPRHKIISLLYFGNQT 585 +Q VC L+C P +I+ LL F ++T Sbjct: 4787 KQGVCQLLCNPNKRILFLLPFTSRT 4713
>LOC_Os07g42200:12007.t03875:unspliced-genomic protein kinase APK1B, chloroplast precursor, putative, expressed| Length = 4951 Score = 25.4 bits (49), Expect(3) = 8.4 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +1 / -1 Query: 481 LFIEWRRFCFRQAVCSLICGP 543 L I+W+R +R V ++ CGP Sbjct: 643 LMIKWKRDTWRGEVPAIPCGP 581 Score = 24.4 bits (47), Expect(3) = 8.4 Identities = 7/9 (77%), Positives = 7/9 (77%) Frame = +2 / -3 Query: 701 FWLAFWLCA 727 FWLA W CA Sbjct: 35 FWLAIWWCA 9 Score = 23.1 bits (44), Expect(3) = 8.4 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +1 / -2 Query: 121 ERQMMAARLFAEEQLAEDLALKRGVSMGA 207 E A + Q+A L+RGV+MGA Sbjct: 4125 EHHAEAVHVALRRQVAGHDVLRRGVAMGA 4039
>LOC_Os06g05130:12006.t00402:unspliced-genomic myristoyl-acyl carrier protein thioesterase, chloroplast precursor,| putative, expressed Length = 4832 Score = 27.2 bits (53), Expect(2) = 8.7 Identities = 10/12 (83%), Positives = 10/12 (83%) Frame = -2 / +3 Query: 128 WRSTSLLL*PWI 93 WRSTSL *PWI Sbjct: 3906 WRSTSLQA*PWI 3941 Score = 26.3 bits (51), Expect(2) = 8.7 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = -2 / +2 Query: 497 RHSINRCHSGAPAPQLIVSTAWQ 429 RHSI C +GA QL +WQ Sbjct: 1421 RHSITNCQTGACFLQLSRPFSWQ 1489
>LOC_Os11g04140:12011.t00304:unspliced-genomic nodulin-like protein, putative| Length = 1651 Score = 31.3 bits (62), Expect = 9.1 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -3 / +1 Query: 466 LQHHNLLCPPHGRNARLLRPSLAFQQGRARIPFLGR 359 +QH ++C GR ARLL+ + AR P LG+ Sbjct: 970 VQHGAVVCRRGGRRARLLQMEAKIRHQLARHPILGK 1077
>LOC_Os09g25480:12009.t02227:unspliced-genomic hypothetical protein| Length = 1307 Score = 31.3 bits (62), Expect = 9.1 Identities = 12/36 (33%), Positives = 13/36 (36%) Frame = +3 / +2 Query: 432 PCGGHNKLWCWSPRMASVYRVAEVLFQAGCVQPDLW 539 P G W W+PR S V GC D W Sbjct: 599 PSRGREHAWGWAPRSCSARWVGPTTTARGCCLMDCW 706
>LOC_Os06g18810:12006.t01704:unspliced-genomic hypothetical protein| Length = 3142 Score = 31.3 bits (62), Expect = 9.1 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = -2 / -1 Query: 482 RCHSGAPAPQLIVSTAWQKCTSTPAFPC 399 RCH P P L + + C++ P+ PC Sbjct: 751 RCHEQHPCPNLTTTCMGRCCSTLPSTPC 668
>LOC_Os02g10870:12002.t00935:unspliced-genomic hypothetical protein| Length = 432 Score = 31.3 bits (62), Expect = 9.1 Identities = 15/33 (45%), Positives = 15/33 (45%) Frame = -3 / -2 Query: 454 NLLCPPHGRNARLLRPSLAFQQGRARIPFLGRP 356 N PP GR L SL QQGRAR P Sbjct: 416 NSTTPPEGRRTTLGMSSLTVQQGRARFSPTAHP 318
>LOC_Os11g08870:12011.t00779:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5494 Score = 31.3 bits (62), Expect = 9.1 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = +1 / +3 Query: 622 ILLYCISFPCTLALVTYIFIQTLCIWILACFLV 720 I+LYCI+ PCT+ + Y + ++L ++V Sbjct: 1899 IVLYCINVPCTVCV*LYTLLFAYVPYVLVPYIV 1997
>LOC_Os08g33050:12008.t03048:unspliced-genomic KANADI-like transcription factor FEATHERED, putative, expressed| Length = 6811 Score = 31.3 bits (62), Expect = 9.1 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +1 / +1 Query: 655 LALVTYIFIQTLCIWILACFLVVCIMYSWREIVVA 759 L L+ Y+ I CI+I C +CI +S + +A Sbjct: 1894 LRLIIYLSIPRRCIYIFLCSFALCIAFSVHDSFLA 1998
>LOC_Os07g40760:12007.t03735:unspliced-genomic transposon protein, putative, Mutator sub-class| Length = 5733 Score = 31.3 bits (62), Expect = 9.1 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = -1 / +3 Query: 510 ETKPPPLYKQMPFWGSSTTTYCVHRMAEMHVYSGLPLLFS 391 ++K PP F+ TT YC ++ S PLLFS Sbjct: 2265 KSKYPPPTSHCSFYSPPTTQYCSKHYT*INFSSNFPLLFS 2384
>LOC_Os05g34920:12005.t03085:unspliced-genomic expressed protein| Length = 4018 Score = 31.3 bits (62), Expect = 9.1 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = +1 / +3 Query: 652 TLALVTYIFIQTLCIWILACFLVVCIMYSWREIVVALRL 768 T L YI+I+ +CI IL ++ CI++ ++ L + Sbjct: 3792 TYKLYIYIYIKNICI*ILCAYIF*CIIFFIHARIIVLSI 3908
>LOC_Os04g09350:12004.t05448:unspliced-genomic expressed protein| Length = 9844 Score = 25.4 bits (49), Expect(2) = 9.9 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = +3 / +1 Query: 357 GLPKKGILALPC*KAREGRS 416 GLP G+L PC A RS Sbjct: 613 GLPSAGLLGAPCSPAAPARS 672 Score = 22.6 bits (43), Expect(2) = 9.9 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = +3 / +2 Query: 174 SRPQEGRLHGGHDQHTGWRRR 236 SR + R HGGH RRR Sbjct: 500 SRARLWRSHGGHAPRPSKRRR 562 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 331,686,317 Number of extensions: 5751878 Number of successful extensions: 25374 Number of sequences better than 10.0: 44 Length of query: 279 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 230 Effective length of database: 52,856,264 Effective search space: 12156940720 Effective search space used: 12156940720 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
