Clone Information

BLAST Search Result

Clone Name	FLbaf175p18
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|NM_001066070.1\| Oryza sativa (japonica cultivar-group) Os07g...	494	e-136
2	dbj\|AK100927.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	494	e-136
3	dbj\|AP008213.1\| Oryza sativa (japonica cultivar-group) genomic D...	262	5e-66
4	dbj\|AP004395.3\| Oryza sativa (japonica cultivar-group) genomic D...	262	5e-66
5	dbj\|AK059792.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	262	5e-66
6	gb\|AY109048.1\| Zea mays PCO070882 mRNA sequence	153	3e-33
7	gb\|AC182655.2\| Populus trichocarpa clone Pop1-121O5, complete se...	62	9e-06
8	gb\|DQ536148.1\| Populus trichocarpa clone 15623897 auxin-regulate...	54	0.002
9	gb\|AF528565.1\| Zea mays cultivar BSSS53 chromosome 4 clone BAC 0...	44	2.2
10	gb\|CP000117.1\| Anabaena variabilis ATCC 29413 chromosome, comple...	44	2.2
11	gb\|CP000267.1\| Rhodoferax ferrireducens DSM 15236, complete genome	44	2.2
12	emb\|AL160254.10\| Human DNA sequence from clone RP11-576O3 on chr...	44	2.2
13	emb\|CR354582.14\| Zebrafish DNA sequence from clone CH211-215B24 ...	44	2.2
14	ref\|XM_001179483.1\| PREDICTED: Strongylocentrotus purpuratus sim...	42	8.8
15	ref\|XM_789858.2\| PREDICTED: Strongylocentrotus purpuratus simila...	42	8.8
16	gb\|CP000384.1\| Mycobacterium sp. MCS, complete genome	42	8.8
17	gb\|AC167137.7\| Mus musculus chromosome 1, clone RP23-408P8, comp...	42	8.8
18	gb\|AC168268.2\| Mus musculus BAC clone RP23-339K12 from chromosom...	42	8.8
19	gb\|AC139513.10\| Mus musculus chromosome 15, clone RP23-151N6, co...	42	8.8
20	gb\|AC113600.19\| Mus musculus chromosome 6, clone RP23-110A19, co...	42	8.8
21	gb\|AC123659.11\| Mus musculus chromosome 17, clone RP23-192P18, c...	42	8.8
22	gb\|AC138399.18\| Mus musculus chromosome 1, clone RP23-113N18, co...	42	8.8
23	gb\|AY261359.1\| Bovine herpesvirus 5 strain SV507/99, complete ge...	42	8.8
24	gb\|AC083893.33\| Mus musculus strain C57BL/6J clone rp23-21l18 ma...	42	8.8
25	dbj\|AK057084.1\| Homo sapiens cDNA FLJ32522 fis, clone SMINT2000018	42	8.8
26	gb\|AC091923.3\| Homo sapiens chromosome 5 clone RP11-268H4, compl...	42	8.8
27	gb\|AC010733.8\| Homo sapiens BAC clone RP11-373L24 from 2, comple...	42	8.8
28	emb\|AL449264.18\| Human DNA sequence from clone RP11-485H8 on chr...	42	8.8
29	emb\|AL359079.15\| Human DNA sequence from clone RP13-360B22 on ch...	42	8.8
30	emb\|AL163541.13\| Human DNA sequence from clone RP11-358F13 on ch...	42	8.8
31	gb\|AF346497.1\|AF346497 Photorhabdus luminescens strain W14 toxin...	42	8.8
32	emb\|BX640446.1\| Bordetella bronchiseptica strain RB50, complete ...	42	8.8
33	emb\|BX640432.1\| Bordetella parapertussis strain 12822, complete ...	42	8.8
34	emb\|BX640426.1\| Bordetella parapertussis strain 12822, complete ...	42	8.8
35	emb\|BX640419.1\| Bordetella pertussis strain Tohama I, complete g...	42	8.8
36	emb\|AL596166.1\| Listeria innocua Clip11262 complete genome, segm...	42	8.8
37	emb\|BX640496.10\| Mouse DNA sequence from clone RP23-379O23 on ch...	42	8.8
38	gb\|AC009173.9\| Homo sapiens chromosome 16 clone RP11-99H5, compl...	42	8.8
39	emb\|BX005013.8\| Zebrafish DNA sequence from clone DKEY-238G8 in ...	42	8.8
40	dbj\|AP003395.1\| Homo sapiens genomic DNA, chromosome 11q clone:R...	42	8.8
41	dbj\|AP003393.1\| Homo sapiens genomic DNA, chromosome 11q clone:R...	42	8.8
42	gb\|DQ314888.1\| Homo sapiens v-rel reticuloendotheliosis viral on...	42	8.8
43	gb\|AF046867.1\|AF046867 Photorhabdus luminescens insecticidal tox...	42	8.8
44	ref\|XM_763861.1\| Giardia lamblia ATCC 50803 hypothetical protein...	42	8.8

>ref|NM_001066070.1| Oryza sativa (japonica cultivar-group) Os07g0446100 (Os07g0446100)
           mRNA, complete cds
          Length = 2314
 Score =  494 bits (249), Expect = e-136
 Identities = 444/509 (87%)
 Strand = Plus / Plus

                                                                       
Query: 489 atggggctgcagcaatccaaggaggagctgctgtaccagcaggtgaactacggcaacatc 548
           |||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||  |
Sbjct: 488 atggggctgcagcaatccaaggaggagctggtgtatcagcaggtcaactacggcaacgcc 547

                                                                       
Query: 549 gaggggattcggaacctccgggcgcagggcgcgggcgttgagtggattgacaaggaaggg 608
           || |||||||||   ||||||||||||||||| ||  |||||||||| ||||||||||||
Sbjct: 548 gatgggattcgggcgctccgggcgcagggcgcaggtcttgagtggatcgacaaggaaggg 607

                                                                       
Query: 609 aagacgcccctgatggtcgccagcatgcgccctgatctgctgaatgtggccaaagctctg 668
           |||||||||||||||||||| |||||||| ||||||||| | |||||||   | |  |||
Sbjct: 608 aagacgcccctgatggtcgcgagcatgcggcctgatctgatcaatgtggttcaggtgctg 667

                                                                       
Query: 669 cttgaactgggtgcaaacgtgaatgcatatcggcctggatcacatgctgggactgcattg 728
            ||||| |||||||||| ||||| || || || ||||| ||| ||  |||||||||||||
Sbjct: 668 attgaattgggtgcaaatgtgaacgcctaccgtcctgggtcatattgtgggactgcattg 727

                                                                       
Query: 729 caccatgctgccaaaaaaggacttgatccgactgtccatttacttctctcacatggagct 788
           |||||||||||||| ||||| ||||| | |||||||||||| ||||| || |||||||||
Sbjct: 728 caccatgctgccaagaaaggtcttgagcagactgtccatttgcttctatctcatggagct 787

                                                                       
Query: 789 aacccattcataacaaatgatgattgcaataccgcacttgatctggctagagaaaagggt 848
           || || || |||||||||||||||||| | || ||||||||| |||||||||||||||||
Sbjct: 788 aatccgtttataacaaatgatgattgccacacggcacttgatttggctagagaaaagggt 847

                                                                       
Query: 849 catgtgaacgttgtaagggccatagagggacggatttctcttttttctggatggatgagg 908
           |||||||| || ||| | |||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 848 catgtgaatgtcgtacgagccatagagggacgtatttctcttttttgtggatggatgagg 907

                                                                       
Query: 909 gagaattatggtcctggtttcttggaagcatttgctcctcagttgttgactagaaagatt 968
           ||||| ||||||||||| || ||||||||||||||||| || ||  ||||||| || |||
Sbjct: 908 gagaactatggtcctggatttttggaagcatttgctccacaattcctgactaggaaaatt 967

                                        
Query: 969 tgggcagtgattttaccacgtgaagcacg 997
           ||||| ||||||||||| |||||||||||
Sbjct: 968 tgggcggtgattttaccccgtgaagcacg 996



 Score =  262 bits (132), Expect = 5e-66
 Identities = 198/220 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1844 tgcaaaacctgtagaaaatgaagccgatgcaagcagcagtggtaacactccctctggcac 1903
            ||||||||||| ||||| ||| ||  ||||||||| ||| |||||||||||  | || ||
Sbjct: 1810 tgcaaaacctgcagaaagtgatgctaatgcaagcaacagcggtaacactccaccgggaac 1869

                                                                        
Query: 1904 ttgtgtgatttgcttggatgctcctgtggaaggagcctgcattccgtgtggtcacatggc 1963
             ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1870 ctgtgttatttgtttggatgctcctgtggaaggtgcctgcattccgtgtggtcacatggc 1929

                                                                        
Query: 1964 tggttgcatgtcctgcttgaaggatatcgagtcgaagaaatgggggtgccccatttgccg 2023
            ||||||||||||||||||||||||||| || || ||||||||||| ||||||||||| ||
Sbjct: 1930 tggttgcatgtcctgcttgaaggatatagaatcaaagaaatggggatgccccatttgtcg 1989

                                                    
Query: 2024 cgccaagattaaccagattatccgcctgtatgcagtttga 2063
             |||||||||||||||||||||||||| ||||||||||||
Sbjct: 1990 agccaagattaaccagattatccgcctctatgcagtttga 2029



 Score =  194 bits (98), Expect = 1e-45
 Identities = 221/262 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1015 tcaagcttgagttagctatatatcctgacttgcaggctgctaaacctcgtgttgtagtca 1074
            ||||||||||| |  | ||||| ||||| ||||||||| ||||||| |  | |||| | |
Sbjct: 1014 tcaagcttgagctgacgatataccctgaattgcaggcttctaaaccacaagctgtaatta 1073

                                                                        
Query: 1075 aactttggaaatctcaacttgaggaaccaaagtataatctggctgatccttccatgacaa 1134
            |||||||||||| |||||||||||||||||||| ||||| |||  |||||||  ||||||
Sbjct: 1074 aactttggaaatgtcaacttgaggaaccaaagtttaatcaggccaatccttctgtgacaa 1133

                                                                        
Query: 1135 tttttgacaaagttacaaaatcacgatacaagcttttaccggcttatgaaggtgacaagc 1194
            |||| ||||| |  |||| | | |||||||||||| ||||||  | |||||||||||| |
Sbjct: 1134 ttttcgacaagggaacaagaactcgatacaagcttctaccggtgtgtgaaggtgacaaac 1193

                                                                        
Query: 1195 agcagcttcgatcattttatagtgcatgttgtggcatggcacaggttgccagcatggttc 1254
            ||||||||| ||  |||||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 1194 agcagcttcaatggttttatagtgcatgttgtggcattccacaggttgccagcatggttc 1253

                                  
Query: 1255 ctacacgaccagtgaatgcccc 1276
            || | | ||||| |||||||||
Sbjct: 1254 ctgctcaaccagcgaatgcccc 1275



 Score =  111 bits (56), Expect = 1e-20
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1310 accttcagtggaatcgactcccagtaaggaggatgttgagttagcgatggctatcaatgc 1369
            ||||||||||  ||| || ||||| |||||||||| ||||||||| ||||| ||||||||
Sbjct: 1306 accttcagtgatatccacacccagcaaggaggatgctgagttagcaatggccatcaatgc 1365

                                                            
Query: 1370 ctccatccaatcagctatagcagagggagtgcccaatgtgcagccaat 1417
            ||||||||  ||||||||||| |||||||||||| |||| ||||||||
Sbjct: 1366 ctccatcctgtcagctatagccgagggagtgcccgatgttcagccaat 1413



 Score =  107 bits (54), Expect = 2e-19
 Identities = 96/110 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1701 cttccaactcttccaacaccaactgcgccaccacttgccgaaggaaccttctacgatggc 1760
            |||||| ||||||||   ||||||||||| ||||||||||  ||||||||||||||||| 
Sbjct: 1643 cttccatctcttccagtcccaactgcgcctccacttgccgtgggaaccttctacgatggt 1702

                                                              
Query: 1761 cctattgagtatccgtccatagatttcacaccagttgatgtaaccatgcc 1810
            |||||| |||||||||| ||||||| ||| ||||| || |||||||||||
Sbjct: 1703 cctattcagtatccgtcaatagattccacgccagtcgacgtaaccatgcc 1752



 Score = 91.7 bits (46), Expect = 1e-14
 Identities = 127/154 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1437 ctcaatggatggggctcaccagattctccagcgccttcaaaaatgagtggccaagcacag 1496
            ||||||||||||||| |||||||| || | ||||||||||| |  |||||||||| ||  
Sbjct: 1463 ctcaatggatggggcccaccagatacttctgcgccttcaaagacaagtggccaagtacca 1522

                                                                        
Query: 1497 gttgatgccccaagcagcagcaaatacaacggatgggacgtacctggaacaagctctaac 1556
            |||| | |  ||||||| |||| |||||| || |||||||| |||||||||||||||  |
Sbjct: 1523 gttgttacatcaagcagtagcacatacaatgggtgggacgtgcctggaacaagctctggc 1582

                                              
Query: 1557 caaagttcattgaaacctaacaaaagtcagaaca 1590
            |||||||| |  ||||  |||||||| |||||||
Sbjct: 1583 caaagttcgtccaaacacaacaaaagccagaaca 1616

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>dbj|AK100927.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134O07, full
           insert sequence
          Length = 2313

 Score =  494 bits (249), Expect = e-136
 Identities = 444/509 (87%)
 Strand = Plus / Plus

                                                                       
Query: 489 atggggctgcagcaatccaaggaggagctgctgtaccagcaggtgaactacggcaacatc 548
           |||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||  |
Sbjct: 489 atggggctgcagcaatccaaggaggagctggtgtatcagcaggtcaactacggcaacgcc 548

                                                                       
Query: 549 gaggggattcggaacctccgggcgcagggcgcgggcgttgagtggattgacaaggaaggg 608
           || |||||||||   ||||||||||||||||| ||  |||||||||| ||||||||||||
Sbjct: 549 gatgggattcgggcgctccgggcgcagggcgcaggtcttgagtggatcgacaaggaaggg 608

                                                                       
Query: 609 aagacgcccctgatggtcgccagcatgcgccctgatctgctgaatgtggccaaagctctg 668
           |||||||||||||||||||| |||||||| ||||||||| | |||||||   | |  |||
Sbjct: 609 aagacgcccctgatggtcgcgagcatgcggcctgatctgatcaatgtggttcaggtgctg 668

                                                                       
Query: 669 cttgaactgggtgcaaacgtgaatgcatatcggcctggatcacatgctgggactgcattg 728
            ||||| |||||||||| ||||| || || || ||||| ||| ||  |||||||||||||
Sbjct: 669 attgaattgggtgcaaatgtgaacgcctaccgtcctgggtcatattgtgggactgcattg 728

                                                                       
Query: 729 caccatgctgccaaaaaaggacttgatccgactgtccatttacttctctcacatggagct 788
           |||||||||||||| ||||| ||||| | |||||||||||| ||||| || |||||||||
Sbjct: 729 caccatgctgccaagaaaggtcttgagcagactgtccatttgcttctatctcatggagct 788

                                                                       
Query: 789 aacccattcataacaaatgatgattgcaataccgcacttgatctggctagagaaaagggt 848
           || || || |||||||||||||||||| | || ||||||||| |||||||||||||||||
Sbjct: 789 aatccgtttataacaaatgatgattgccacacggcacttgatttggctagagaaaagggt 848

                                                                       
Query: 849 catgtgaacgttgtaagggccatagagggacggatttctcttttttctggatggatgagg 908
           |||||||| || ||| | |||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 849 catgtgaatgtcgtacgagccatagagggacgtatttctcttttttgtggatggatgagg 908

                                                                       
Query: 909 gagaattatggtcctggtttcttggaagcatttgctcctcagttgttgactagaaagatt 968
           ||||| ||||||||||| || ||||||||||||||||| || ||  ||||||| || |||
Sbjct: 909 gagaactatggtcctggatttttggaagcatttgctccacaattcctgactaggaaaatt 968

                                        
Query: 969 tgggcagtgattttaccacgtgaagcacg 997
           ||||| ||||||||||| |||||||||||
Sbjct: 969 tgggcggtgattttaccccgtgaagcacg 997



 Score =  262 bits (132), Expect = 5e-66
 Identities = 198/220 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1844 tgcaaaacctgtagaaaatgaagccgatgcaagcagcagtggtaacactccctctggcac 1903
            ||||||||||| ||||| ||| ||  ||||||||| ||| |||||||||||  | || ||
Sbjct: 1809 tgcaaaacctgcagaaagtgatgctaatgcaagcaacagcggtaacactccaccgggaac 1868

                                                                        
Query: 1904 ttgtgtgatttgcttggatgctcctgtggaaggagcctgcattccgtgtggtcacatggc 1963
             ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1869 ctgtgttatttgtttggatgctcctgtggaaggtgcctgcattccgtgtggtcacatggc 1928

                                                                        
Query: 1964 tggttgcatgtcctgcttgaaggatatcgagtcgaagaaatgggggtgccccatttgccg 2023
            ||||||||||||||||||||||||||| || || ||||||||||| ||||||||||| ||
Sbjct: 1929 tggttgcatgtcctgcttgaaggatatagaatcaaagaaatggggatgccccatttgtcg 1988

                                                    
Query: 2024 cgccaagattaaccagattatccgcctgtatgcagtttga 2063
             |||||||||||||||||||||||||| ||||||||||||
Sbjct: 1989 agccaagattaaccagattatccgcctctatgcagtttga 2028



 Score =  194 bits (98), Expect = 1e-45
 Identities = 221/262 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1015 tcaagcttgagttagctatatatcctgacttgcaggctgctaaacctcgtgttgtagtca 1074
            ||||||||||| |  | ||||| ||||| ||||||||| ||||||| |  | |||| | |
Sbjct: 1015 tcaagcttgagctgacgatataccctgaattgcaggcttctaaaccacaagctgtaatta 1074

                                                                        
Query: 1075 aactttggaaatctcaacttgaggaaccaaagtataatctggctgatccttccatgacaa 1134
            |||||||||||| |||||||||||||||||||| ||||| |||  |||||||  ||||||
Sbjct: 1075 aactttggaaatgtcaacttgaggaaccaaagtttaatcaggccaatccttctgtgacaa 1134

                                                                        
Query: 1135 tttttgacaaagttacaaaatcacgatacaagcttttaccggcttatgaaggtgacaagc 1194
            |||| ||||| |  |||| | | |||||||||||| ||||||  | |||||||||||| |
Sbjct: 1135 ttttcgacaagggaacaagaactcgatacaagcttctaccggtgtgtgaaggtgacaaac 1194

                                                                        
Query: 1195 agcagcttcgatcattttatagtgcatgttgtggcatggcacaggttgccagcatggttc 1254
            ||||||||| ||  |||||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 1195 agcagcttcaatggttttatagtgcatgttgtggcattccacaggttgccagcatggttc 1254

                                  
Query: 1255 ctacacgaccagtgaatgcccc 1276
            || | | ||||| |||||||||
Sbjct: 1255 ctgctcaaccagcgaatgcccc 1276



 Score =  111 bits (56), Expect = 1e-20
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1310 accttcagtggaatcgactcccagtaaggaggatgttgagttagcgatggctatcaatgc 1369
            ||||||||||  ||| || ||||| |||||||||| ||||||||| ||||| ||||||||
Sbjct: 1307 accttcagtgatatccacacccagcaaggaggatgctgagttagcaatggccatcaatgc 1366

                                                            
Query: 1370 ctccatccaatcagctatagcagagggagtgcccaatgtgcagccaat 1417
            ||||||||  ||||||||||| |||||||||||| |||| ||||||||
Sbjct: 1367 ctccatcctgtcagctatagccgagggagtgcccgatgttcagccaat 1414



 Score =  107 bits (54), Expect = 2e-19
 Identities = 96/110 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1701 cttccaactcttccaacaccaactgcgccaccacttgccgaaggaaccttctacgatggc 1760
            |||||| ||||||||   ||||||||||| ||||||||||  ||||||||||||||||| 
Sbjct: 1642 cttccatctcttccagtcccaactgcgcctccacttgccgtgggaaccttctacgatggt 1701

                                                              
Query: 1761 cctattgagtatccgtccatagatttcacaccagttgatgtaaccatgcc 1810
            |||||| |||||||||| ||||||| ||| ||||| || |||||||||||
Sbjct: 1702 cctattcagtatccgtcaatagattccacgccagtcgacgtaaccatgcc 1751



 Score = 91.7 bits (46), Expect = 1e-14
 Identities = 127/154 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1437 ctcaatggatggggctcaccagattctccagcgccttcaaaaatgagtggccaagcacag 1496
            ||||||||||||||| |||||||| || | ||||||||||| |  |||||||||| ||  
Sbjct: 1462 ctcaatggatggggcccaccagatacttctgcgccttcaaagacaagtggccaagtacca 1521

                                                                        
Query: 1497 gttgatgccccaagcagcagcaaatacaacggatgggacgtacctggaacaagctctaac 1556
            |||| | |  ||||||| |||| |||||| || |||||||| |||||||||||||||  |
Sbjct: 1522 gttgttacatcaagcagtagcacatacaatgggtgggacgtgcctggaacaagctctggc 1581

                                              
Query: 1557 caaagttcattgaaacctaacaaaagtcagaaca 1590
            |||||||| |  ||||  |||||||| |||||||
Sbjct: 1582 caaagttcgtccaaacacaacaaaagccagaaca 1615

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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score =  262 bits (132), Expect = 5e-66
 Identities = 198/220 (90%)
 Strand = Plus / Minus

                                                                            
Query: 1844     tgcaaaacctgtagaaaatgaagccgatgcaagcagcagtggtaacactccctctggcac 1903
                ||||||||||| ||||| ||| ||  ||||||||| ||| |||||||||||  | || ||
Sbjct: 15184113 tgcaaaacctgcagaaagtgatgctaatgcaagcaacagcggtaacactccaccgggaac 15184054

                                                                            
Query: 1904     ttgtgtgatttgcttggatgctcctgtggaaggagcctgcattccgtgtggtcacatggc 1963
                 ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 15184053 ctgtgttatttgtttggatgctcctgtggaaggtgcctgcattccgtgtggtcacatggc 15183994

                                                                            
Query: 1964     tggttgcatgtcctgcttgaaggatatcgagtcgaagaaatgggggtgccccatttgccg 2023
                ||||||||||||||||||||||||||| || || ||||||||||| ||||||||||| ||
Sbjct: 15183993 tggttgcatgtcctgcttgaaggatatagaatcaaagaaatggggatgccccatttgtcg 15183934

                                                        
Query: 2024     cgccaagattaaccagattatccgcctgtatgcagtttga 2063
                 |||||||||||||||||||||||||| ||||||||||||
Sbjct: 15183933 agccaagattaaccagattatccgcctctatgcagtttga 15183894



 Score =  111 bits (56), Expect = 1e-20
 Identities = 95/108 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1310     accttcagtggaatcgactcccagtaaggaggatgttgagttagcgatggctatcaatgc 1369
                ||||||||||  ||| || ||||| |||||||||| ||||||||| ||||| ||||||||
Sbjct: 15184617 accttcagtgatatccacacccagcaaggaggatgctgagttagcaatggccatcaatgc 15184558

                                                                
Query: 1370     ctccatccaatcagctatagcagagggagtgcccaatgtgcagccaat 1417
                ||||||||  ||||||||||| |||||||||||| |||| ||||||||
Sbjct: 15184557 ctccatcctgtcagctatagccgagggagtgcccgatgttcagccaat 15184510



 Score =  111 bits (56), Expect = 1e-20
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                            
Query: 489      atggggctgcagcaatccaaggaggagctgctgtaccagcaggtgaactacggcaacatc 548
                |||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||  |
Sbjct: 15188935 atggggctgcagcaatccaaggaggagctggtgtatcagcaggtcaactacggcaacgcc 15188876

                                                
Query: 549      gaggggattcggaacctccgggcgcagggcgc 580
                || |||||||||   |||||||||||||||||
Sbjct: 15188875 gatgggattcgggcgctccgggcgcagggcgc 15188844



 Score =  107 bits (54), Expect = 2e-19
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1701     cttccaactcttccaacaccaactgcgccaccacttgccgaaggaaccttctacgatggc 1760
                |||||| ||||||||   ||||||||||| ||||||||||  ||||||||||||||||| 
Sbjct: 15184280 cttccatctcttccagtcccaactgcgcctccacttgccgtgggaaccttctacgatggt 15184221

                                                                  
Query: 1761     cctattgagtatccgtccatagatttcacaccagttgatgtaaccatgcc 1810
                |||||| |||||||||| ||||||| ||| ||||| || |||||||||||
Sbjct: 15184220 cctattcagtatccgtcaatagattccacgccagtcgacgtaaccatgcc 15184171



 Score =  105 bits (53), Expect = 7e-19
 Identities = 68/73 (93%)
 Strand = Plus / Minus

                                                                            
Query: 874      agggacggatttctcttttttctggatggatgagggagaattatggtcctggtttcttgg 933
                ||||||| ||||||||||||| |||||||||||||||||| ||||||||||| || ||||
Sbjct: 15187205 agggacgtatttctcttttttgtggatggatgagggagaactatggtcctggatttttgg 15187146

                             
Query: 934      aagcatttgctcc 946
                |||||||||||||
Sbjct: 15187145 aagcatttgctcc 15187133



 Score = 97.6 bits (49), Expect = 2e-16
 Identities = 64/69 (92%)
 Strand = Plus / Minus

                                                                            
Query: 589      agtggattgacaaggaagggaagacgcccctgatggtcgccagcatgcgccctgatctgc 648
                ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| 
Sbjct: 15188726 agtggatcgacaaggaagggaagacgcccctgatggtcgcgagcatgcggcctgatctga 15188667

                         
Query: 649      tgaatgtgg 657
                | |||||||
Sbjct: 15188666 tcaatgtgg 15188658



 Score = 95.6 bits (48), Expect = 7e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                            
Query: 785      agctaacccattcataacaaatgatgattgcaataccgcacttgatctggctagagaaaa 844
                |||||| || || |||||||||||||||||| | || ||||||||| |||||||||||||
Sbjct: 15187385 agctaatccgtttataacaaatgatgattgccacacggcacttgatttggctagagaaaa 15187326

                                                
Query: 845      gggtcatgtgaacgttgtaagggccatagagg 876
                |||||||||||| || ||| | ||||||||||
Sbjct: 15187325 gggtcatgtgaatgtcgtacgagccatagagg 15187294



 Score = 91.7 bits (46), Expect = 1e-14
 Identities = 127/154 (82%)
 Strand = Plus / Minus

                                                                            
Query: 1437     ctcaatggatggggctcaccagattctccagcgccttcaaaaatgagtggccaagcacag 1496
                ||||||||||||||| |||||||| || | ||||||||||| |  |||||||||| ||  
Sbjct: 15184460 ctcaatggatggggcccaccagatacttctgcgccttcaaagacaagtggccaagtacca 15184401

                                                                            
Query: 1497     gttgatgccccaagcagcagcaaatacaacggatgggacgtacctggaacaagctctaac 1556
                |||| | |  ||||||| |||| |||||| || |||||||| |||||||||||||||  |
Sbjct: 15184400 gttgttacatcaagcagtagcacatacaatgggtgggacgtgcctggaacaagctctggc 15184341

                                                  
Query: 1557     caaagttcattgaaacctaacaaaagtcagaaca 1590
                |||||||| |  ||||  |||||||| |||||||
Sbjct: 15184340 caaagttcgtccaaacacaacaaaagccagaaca 15184307



 Score = 85.7 bits (43), Expect = 7e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1158     cgatacaagcttttaccggcttatgaaggtgacaagcagcagcttcgatcattttatagt 1217
                |||||||||||| ||||||  | |||||||||||| |||||||||| ||  |||||||||
Sbjct: 15185073 cgatacaagcttctaccggtgtgtgaaggtgacaaacagcagcttcaatggttttatagt 15185014

                                       
Query: 1218     gcatgttgtggcatggcacaggt 1240
                ||||||||||||||  |||||||
Sbjct: 15185013 gcatgttgtggcattccacaggt 15184991



 Score = 85.7 bits (43), Expect = 7e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                            
Query: 716      tgggactgcattgcaccatgctgccaaaaaaggacttgatccgactgtccatttacttct 775
                ||||||||||||||||||||||||||| ||||| ||||| | |||||||||||| |||||
Sbjct: 15187537 tgggactgcattgcaccatgctgccaagaaaggtcttgagcagactgtccatttgcttct 15187478

                           
Query: 776      ctcacatggag 786
                 || |||||||
Sbjct: 15187477 atctcatggag 15187467



 Score = 77.8 bits (39), Expect = 2e-10
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                            
Query: 1074     aaactttggaaatctcaacttgaggaaccaaagtataatctggctgatccttccatgaca 1133
                ||||||||||||| |||||||||||||||||||| ||||| |||  |||||||  |||||
Sbjct: 15186120 aaactttggaaatgtcaacttgaggaaccaaagtttaatcaggccaatccttctgtgaca 15186061

                           
Query: 1134     atttttgacaa 1144
                ||||| |||||
Sbjct: 15186060 attttcgacaa 15186050



 Score = 48.1 bits (24), Expect = 0.14
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 1237     aggttgccagcatggttcctacacgaccagtgaatgcccc 1276
                |||||||||||||||||||| | | ||||| |||||||||
Sbjct: 15184687 aggttgccagcatggttcctgctcaaccagcgaatgcccc 15184648



 Score = 44.1 bits (22), Expect = 2.2
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 968      ttgggcagtgattttaccacgtgaagcacg 997
                |||||| ||||||||||| |||||||||||
Sbjct: 15186971 ttgggcggtgattttaccccgtgaagcacg 15186942

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>dbj|AP004395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0030H06
          Length = 147890

 Score =  262 bits (132), Expect = 5e-66
 Identities = 198/220 (90%)
 Strand = Plus / Minus

                                                                         
Query: 1844  tgcaaaacctgtagaaaatgaagccgatgcaagcagcagtggtaacactccctctggcac 1903
             ||||||||||| ||||| ||| ||  ||||||||| ||| |||||||||||  | || ||
Sbjct: 50862 tgcaaaacctgcagaaagtgatgctaatgcaagcaacagcggtaacactccaccgggaac 50803

                                                                         
Query: 1904  ttgtgtgatttgcttggatgctcctgtggaaggagcctgcattccgtgtggtcacatggc 1963
              ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 50802 ctgtgttatttgtttggatgctcctgtggaaggtgcctgcattccgtgtggtcacatggc 50743

                                                                         
Query: 1964  tggttgcatgtcctgcttgaaggatatcgagtcgaagaaatgggggtgccccatttgccg 2023
             ||||||||||||||||||||||||||| || || ||||||||||| ||||||||||| ||
Sbjct: 50742 tggttgcatgtcctgcttgaaggatatagaatcaaagaaatggggatgccccatttgtcg 50683

                                                     
Query: 2024  cgccaagattaaccagattatccgcctgtatgcagtttga 2063
              |||||||||||||||||||||||||| ||||||||||||
Sbjct: 50682 agccaagattaaccagattatccgcctctatgcagtttga 50643



 Score =  111 bits (56), Expect = 1e-20
 Identities = 95/108 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1310  accttcagtggaatcgactcccagtaaggaggatgttgagttagcgatggctatcaatgc 1369
             ||||||||||  ||| || ||||| |||||||||| ||||||||| ||||| ||||||||
Sbjct: 51366 accttcagtgatatccacacccagcaaggaggatgctgagttagcaatggccatcaatgc 51307

                                                             
Query: 1370  ctccatccaatcagctatagcagagggagtgcccaatgtgcagccaat 1417
             ||||||||  ||||||||||| |||||||||||| |||| ||||||||
Sbjct: 51306 ctccatcctgtcagctatagccgagggagtgcccgatgttcagccaat 51259



 Score =  111 bits (56), Expect = 1e-20
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                         
Query: 489   atggggctgcagcaatccaaggaggagctgctgtaccagcaggtgaactacggcaacatc 548
             |||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||  |
Sbjct: 55684 atggggctgcagcaatccaaggaggagctggtgtatcagcaggtcaactacggcaacgcc 55625

                                             
Query: 549   gaggggattcggaacctccgggcgcagggcgc 580
             || |||||||||   |||||||||||||||||
Sbjct: 55624 gatgggattcgggcgctccgggcgcagggcgc 55593



 Score =  107 bits (54), Expect = 2e-19
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1701  cttccaactcttccaacaccaactgcgccaccacttgccgaaggaaccttctacgatggc 1760
             |||||| ||||||||   ||||||||||| ||||||||||  ||||||||||||||||| 
Sbjct: 51029 cttccatctcttccagtcccaactgcgcctccacttgccgtgggaaccttctacgatggt 50970

                                                               
Query: 1761  cctattgagtatccgtccatagatttcacaccagttgatgtaaccatgcc 1810
             |||||| |||||||||| ||||||| ||| ||||| || |||||||||||
Sbjct: 50969 cctattcagtatccgtcaatagattccacgccagtcgacgtaaccatgcc 50920



 Score =  105 bits (53), Expect = 7e-19
 Identities = 68/73 (93%)
 Strand = Plus / Minus

                                                                         
Query: 874   agggacggatttctcttttttctggatggatgagggagaattatggtcctggtttcttgg 933
             ||||||| ||||||||||||| |||||||||||||||||| ||||||||||| || ||||
Sbjct: 53954 agggacgtatttctcttttttgtggatggatgagggagaactatggtcctggatttttgg 53895

                          
Query: 934   aagcatttgctcc 946
             |||||||||||||
Sbjct: 53894 aagcatttgctcc 53882



 Score = 97.6 bits (49), Expect = 2e-16
 Identities = 64/69 (92%)
 Strand = Plus / Minus

                                                                         
Query: 589   agtggattgacaaggaagggaagacgcccctgatggtcgccagcatgcgccctgatctgc 648
             ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| 
Sbjct: 55475 agtggatcgacaaggaagggaagacgcccctgatggtcgcgagcatgcggcctgatctga 55416

                      
Query: 649   tgaatgtgg 657
             | |||||||
Sbjct: 55415 tcaatgtgg 55407



 Score = 95.6 bits (48), Expect = 7e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                         
Query: 785   agctaacccattcataacaaatgatgattgcaataccgcacttgatctggctagagaaaa 844
             |||||| || || |||||||||||||||||| | || ||||||||| |||||||||||||
Sbjct: 54134 agctaatccgtttataacaaatgatgattgccacacggcacttgatttggctagagaaaa 54075

                                             
Query: 845   gggtcatgtgaacgttgtaagggccatagagg 876
             |||||||||||| || ||| | ||||||||||
Sbjct: 54074 gggtcatgtgaatgtcgtacgagccatagagg 54043



 Score = 91.7 bits (46), Expect = 1e-14
 Identities = 127/154 (82%)
 Strand = Plus / Minus

                                                                         
Query: 1437  ctcaatggatggggctcaccagattctccagcgccttcaaaaatgagtggccaagcacag 1496
             ||||||||||||||| |||||||| || | ||||||||||| |  |||||||||| ||  
Sbjct: 51209 ctcaatggatggggcccaccagatacttctgcgccttcaaagacaagtggccaagtacca 51150

                                                                         
Query: 1497  gttgatgccccaagcagcagcaaatacaacggatgggacgtacctggaacaagctctaac 1556
             |||| | |  ||||||| |||| |||||| || |||||||| |||||||||||||||  |
Sbjct: 51149 gttgttacatcaagcagtagcacatacaatgggtgggacgtgcctggaacaagctctggc 51090

                                               
Query: 1557  caaagttcattgaaacctaacaaaagtcagaaca 1590
             |||||||| |  ||||  |||||||| |||||||
Sbjct: 51089 caaagttcgtccaaacacaacaaaagccagaaca 51056



 Score = 85.7 bits (43), Expect = 7e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1158  cgatacaagcttttaccggcttatgaaggtgacaagcagcagcttcgatcattttatagt 1217
             |||||||||||| ||||||  | |||||||||||| |||||||||| ||  |||||||||
Sbjct: 51822 cgatacaagcttctaccggtgtgtgaaggtgacaaacagcagcttcaatggttttatagt 51763

                                    
Query: 1218  gcatgttgtggcatggcacaggt 1240
             ||||||||||||||  |||||||
Sbjct: 51762 gcatgttgtggcattccacaggt 51740



 Score = 85.7 bits (43), Expect = 7e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                         
Query: 716   tgggactgcattgcaccatgctgccaaaaaaggacttgatccgactgtccatttacttct 775
             ||||||||||||||||||||||||||| ||||| ||||| | |||||||||||| |||||
Sbjct: 54286 tgggactgcattgcaccatgctgccaagaaaggtcttgagcagactgtccatttgcttct 54227

                        
Query: 776   ctcacatggag 786
              || |||||||
Sbjct: 54226 atctcatggag 54216



 Score = 77.8 bits (39), Expect = 2e-10
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                         
Query: 1074  aaactttggaaatctcaacttgaggaaccaaagtataatctggctgatccttccatgaca 1133
             ||||||||||||| |||||||||||||||||||| ||||| |||  |||||||  |||||
Sbjct: 52869 aaactttggaaatgtcaacttgaggaaccaaagtttaatcaggccaatccttctgtgaca 52810

                        
Query: 1134  atttttgacaa 1144
             ||||| |||||
Sbjct: 52809 attttcgacaa 52799



 Score = 48.1 bits (24), Expect = 0.14
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 1237  aggttgccagcatggttcctacacgaccagtgaatgcccc 1276
             |||||||||||||||||||| | | ||||| |||||||||
Sbjct: 51436 aggttgccagcatggttcctgctcaaccagcgaatgcccc 51397



 Score = 44.1 bits (22), Expect = 2.2
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 968   ttgggcagtgattttaccacgtgaagcacg 997
             |||||| ||||||||||| |||||||||||
Sbjct: 53720 ttgggcggtgattttaccccgtgaagcacg 53691

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>dbj|AK059792.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E05, full
            insert sequence
          Length = 1132

 Score =  262 bits (132), Expect = 5e-66
 Identities = 198/220 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1844 tgcaaaacctgtagaaaatgaagccgatgcaagcagcagtggtaacactccctctggcac 1903
            ||||||||||| ||||| ||| ||  ||||||||| ||| |||||||||||  | || ||
Sbjct: 639  tgcaaaacctgcagaaagtgatgctaatgcaagcaacagcggtaacactccaccgggaac 698

                                                                        
Query: 1904 ttgtgtgatttgcttggatgctcctgtggaaggagcctgcattccgtgtggtcacatggc 1963
             ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 699  ctgtgttatttgtttggatgctcctgtggaaggtgcctgcattccgtgtggtcacatggc 758

                                                                        
Query: 1964 tggttgcatgtcctgcttgaaggatatcgagtcgaagaaatgggggtgccccatttgccg 2023
            ||||||||||||||||||||||||||| || || ||||||||||| ||||||||||| ||
Sbjct: 759  tggttgcatgtcctgcttgaaggatatagaatcaaagaaatggggatgccccatttgtcg 818

                                                    
Query: 2024 cgccaagattaaccagattatccgcctgtatgcagtttga 2063
             |||||||||||||||||||||||||| ||||||||||||
Sbjct: 819  agccaagattaaccagattatccgcctctatgcagtttga 858



 Score =  111 bits (56), Expect = 1e-20
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1310 accttcagtggaatcgactcccagtaaggaggatgttgagttagcgatggctatcaatgc 1369
            ||||||||||  ||| || ||||| |||||||||| ||||||||| ||||| ||||||||
Sbjct: 135  accttcagtgatatccacacccagcaaggaggatgctgagttagcaatggccatcaatgc 194

                                                            
Query: 1370 ctccatccaatcagctatagcagagggagtgcccaatgtgcagccaat 1417
            ||||||||  ||||||||||| |||||||||||| |||| ||||||||
Sbjct: 195  ctccatcctgtcagctatagccgagggagtgcccgatgttcagccaat 242



 Score =  107 bits (54), Expect = 2e-19
 Identities = 96/110 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1701 cttccaactcttccaacaccaactgcgccaccacttgccgaaggaaccttctacgatggc 1760
            |||||| ||||||||   ||||||||||| ||||||||||  ||||||||||||||||| 
Sbjct: 472  cttccatctcttccagtcccaactgcgcctccacttgccgtgggaaccttctacgatggt 531

                                                              
Query: 1761 cctattgagtatccgtccatagatttcacaccagttgatgtaaccatgcc 1810
            |||||| |||||||||| ||||||| ||| ||||| || |||||||||||
Sbjct: 532  cctattcagtatccgtcaatagattccacgccagtcgacgtaaccatgcc 581



 Score = 91.7 bits (46), Expect = 1e-14
 Identities = 127/154 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1437 ctcaatggatggggctcaccagattctccagcgccttcaaaaatgagtggccaagcacag 1496
            ||||||||||||||| |||||||| || | ||||||||||| |  |||||||||| ||  
Sbjct: 292  ctcaatggatggggcccaccagatacttctgcgccttcaaagacaagtggccaagtacca 351

                                                                        
Query: 1497 gttgatgccccaagcagcagcaaatacaacggatgggacgtacctggaacaagctctaac 1556
            |||| | |  ||||||| |||| |||||| || |||||||| |||||||||||||||  |
Sbjct: 352  gttgttacatcaagcagtagcacatacaatgggtgggacgtgcctggaacaagctctggc 411

                                              
Query: 1557 caaagttcattgaaacctaacaaaagtcagaaca 1590
            |||||||| |  ||||  |||||||| |||||||
Sbjct: 412  caaagttcgtccaaacacaacaaaagccagaaca 445



 Score = 48.1 bits (24), Expect = 0.14
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 1237 aggttgccagcatggttcctacacgaccagtgaatgcccc 1276
            |||||||||||||||||||| | | ||||| |||||||||
Sbjct: 65   aggttgccagcatggttcctgctcaaccagcgaatgcccc 104

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>gb|AY109048.1| Zea mays PCO070882 mRNA sequence
          Length = 941

 Score =  153 bits (77), Expect = 3e-33
 Identities = 176/209 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1855 tagaaaatgaagccgatgcaagcagcagtggtaacactccctctggcacttgtgtgattt 1914
            ||||||||||||| ||||||||   ||| || || ||||||||||| ||||| || || |
Sbjct: 495  tagaaaatgaagctgatgcaagtgacagcggcaaaactccctctggtacttgcgttatat 554

                                                                        
Query: 1915 gcttggatgctcctgtggaaggagcctgcattccgtgtggtcacatggctggttgcatgt 1974
            |  ||||||| ||||||||||| |||||||| ||||| || |||||||||||||||||||
Sbjct: 555  gtctggatgcccctgtggaaggcgcctgcatcccgtgcggccacatggctggttgcatgt 614

                                                                        
Query: 1975 cctgcttgaaggatatcgagtcgaagaaatgggggtgccccatttgccgcgccaagatta 2034
            |||| ||||||||||| || || ||||| ||||| ||||| || ||||| |||| |||||
Sbjct: 615  cctgtttgaaggatatagaatccaagaagtggggatgccctatctgccgtgccacgatta 674

                                         
Query: 2035 accagattatccgcctgtatgcagtttga 2063
            ||||| || | ||||| ||||| ||||||
Sbjct: 675  accaggttgttcgcctctatgctgtttga 703



 Score = 79.8 bits (40), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1337 ggaggatgttgagttagcgatggctatcaatgcctccatccaatcagctatagcagaggg 1396
            ||| |||||||| ||||| |||||||||||||||||||| ||||||||||| ||||| ||
Sbjct: 1    ggangatgttgaattagcaatggctatcaatgcctccattcaatcagctattgcagaagg 60

               
Query: 1397 agt 1399
            |||
Sbjct: 61   agt 63



 Score = 69.9 bits (35), Expect = 4e-08
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1503 gccccaagcagcagcaaatacaacggatgggacgtacctggaacaagctctaaccaaagt 1562
            ||||||||||||||||  ||||| |||||||| || || |||||||||||||  ||||||
Sbjct: 209  gccccaagcagcagcacttacaatggatgggatgtgcccggaacaagctctagtcaaagt 268

                       
Query: 1563 tcattgaaacc 1573
            |||| ||||||
Sbjct: 269  tcatcgaaacc 279



 Score = 58.0 bits (29), Expect = 1e-04
 Identities = 89/109 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1708 ctcttccaacaccaactgcgccaccacttgccgaaggaaccttctacgatggccctattg 1767
            |||| ||||| ||||| ||||||||| |||| |||| |||||||||| | || ||| || 
Sbjct: 333  ctctcccaaccccaaccgcgccaccatttgctgaagaaaccttctacaacggtcctgttc 392

                                                             
Query: 1768 agtatccgtccatagatttcacaccagttgatgtaaccatgccagctac 1816
            | ||||| |||||||| |  || || || |||||||||||||| |||||
Sbjct: 393  actatccatccatagactctacgcctgtcgatgtaaccatgccggctac 441

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>gb|AC182655.2| Populus trichocarpa clone Pop1-121O5, complete sequence
          Length = 87839

 Score = 61.9 bits (31), Expect = 9e-06
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                         
Query: 1920  gatgctcctgtggaaggagcctgcattccgtgtggtcacatggctggttgcatgtcctgc 1979
             |||||||| || || ||||| |||||||| ||||| ||||||| ||| |||||||| || 
Sbjct: 35142 gatgctccagttgagggagcttgcattccatgtggccacatggttggatgcatgtcttgt 35201

                                                
Query: 1980  ttgaaggatatcgagtcgaagaaatgggggtgccc 2014
             |||||||| ||| |  | ||||||||||| |||||
Sbjct: 35202 ttgaaggaaatcaaagccaagaaatggggttgccc 35236

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>gb|DQ536148.1| Populus trichocarpa clone 15623897 auxin-regulated protein-like
            protein mRNA, complete cds
          Length = 1500

 Score = 54.0 bits (27), Expect = 0.002
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 1923 gctcctgtggaaggagcctgcattccgtgtggtcacatggctggttg 1969
            |||||||| ||||| || |||||||| || |||||||||||||||||
Sbjct: 1360 gctcctgttgaaggtgcttgcattccttgcggtcacatggctggttg 1406

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>gb|AF528565.1| Zea mays cultivar BSSS53 chromosome 4 clone BAC 072, complete sequence
          Length = 106246

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 882   atttctcttttttctggatggatgagggagaattatggtcct 923
             |||||||||| || |||||||||||| ||||| |||| ||||
Sbjct: 57242 atttctctttattgtggatggatgagagagaactatgttcct 57283

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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 1501    atgccccaagcagcagcaaata 1522
               ||||||||||||||||||||||
Sbjct: 5645562 atgccccaagcagcagcaaata 5645541

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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 1453    caccagattctccagcgccttc 1474
               ||||||||||||||||||||||
Sbjct: 1412607 caccagattctccagcgccttc 1412586

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>emb|AL160254.10| Human DNA sequence from clone RP11-576O3 on chromosome 13, complete
             sequence
          Length = 139881

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 2236  ttttaagacattttttcttaat 2257
             ||||||||||||||||||||||
Sbjct: 43413 ttttaagacattttttcttaat 43434

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>emb|CR354582.14| Zebrafish DNA sequence from clone CH211-215B24 in linkage group 8,
             complete sequence
          Length = 227074

 Score = 44.1 bits (22), Expect = 2.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1093  ttgaggaaccaaagtataatct 1114
             ||||||||||||||||||||||
Sbjct: 56238 ttgaggaaccaaagtataatct 56217

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>ref|XM_001179483.1| PREDICTED: Strongylocentrotus purpuratus similar to TGF-beta
           inducible early protein (LOC590249), partial mRNA
          Length = 3487

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 748 gacttgatccgactgtccatt 768
           |||||||||||||||||||||
Sbjct: 894 gacttgatccgactgtccatt 874

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>ref|XM_789858.2| PREDICTED: Strongylocentrotus purpuratus similar to TGF-beta
           inducible early protein (LOC590249), partial mRNA
          Length = 3487

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 748 gacttgatccgactgtccatt 768
           |||||||||||||||||||||
Sbjct: 894 gacttgatccgactgtccatt 874

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>gb|CP000384.1| Mycobacterium sp. MCS, complete genome
          Length = 5705448

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 620     gatggtcgccagcatgcgccc 640
               |||||||||||||||||||||
Sbjct: 4062648 gatggtcgccagcatgcgccc 4062668

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>gb|AC167137.7| Mus musculus chromosome 1, clone RP23-408P8, complete sequence
          Length = 184702

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1541  tggaacaagctctaaccaaag 1561
             |||||||||||||||||||||
Sbjct: 56220 tggaacaagctctaaccaaag 56240

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>gb|AC168268.2| Mus musculus BAC clone RP23-339K12 from chromosome 17, complete
            sequence
          Length = 184085

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 2228 gtacatagttttaagacattt 2248
            |||||||||||||||||||||
Sbjct: 6460 gtacatagttttaagacattt 6480

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>gb|AC139513.10| Mus musculus chromosome 15, clone RP23-151N6, complete sequence
          Length = 238980

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2231  catagttttaagacatttttt 2251
             |||||||||||||||||||||
Sbjct: 84848 catagttttaagacatttttt 84868

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>gb|AC113600.19| Mus musculus chromosome 6, clone RP23-110A19, complete sequence
          Length = 212705

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2205   ctacaacactgaaggcaactt 2225
              |||||||||||||||||||||
Sbjct: 158512 ctacaacactgaaggcaactt 158532

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>gb|AC123659.11| Mus musculus chromosome 17, clone RP23-192P18, complete sequence
          Length = 207169

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2228  gtacatagttttaagacattt 2248
             |||||||||||||||||||||
Sbjct: 38662 gtacatagttttaagacattt 38642

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>gb|AC138399.18| Mus musculus chromosome 1, clone RP23-113N18, complete sequence
          Length = 219810

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1541  tggaacaagctctaaccaaag 1561
             |||||||||||||||||||||
Sbjct: 72337 tggaacaagctctaaccaaag 72317

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>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome
          Length = 138390

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 565  tccgggcgcagggcgcgggcg 585
            |||||||||||||||||||||
Sbjct: 8426 tccgggcgcagggcgcgggcg 8446

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>gb|AC083893.33| Mus musculus strain C57BL/6J clone rp23-21l18 map 4, complete sequence
          Length = 244349

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2228  gtacatagttttaagacattt 2248
             |||||||||||||||||||||
Sbjct: 34868 gtacatagttttaagacattt 34848

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>dbj|AK057084.1| Homo sapiens cDNA FLJ32522 fis, clone SMINT2000018
          Length = 2875

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1224 tgtggcatggcacaggttgcc 1244
            |||||||||||||||||||||
Sbjct: 563  tgtggcatggcacaggttgcc 583

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>gb|AC091923.3| Homo sapiens chromosome 5 clone RP11-268H4, complete sequence
          Length = 78413

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1133  aatttttgacaaagttacaaa 1153
             |||||||||||||||||||||
Sbjct: 68551 aatttttgacaaagttacaaa 68531

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>gb|AC010733.8| Homo sapiens BAC clone RP11-373L24 from 2, complete sequence
          Length = 209060

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 2235  gttttaagacattttttcttaatgaggagtgtg 2267
             ||||||||||| || |||||||| |||||||||
Sbjct: 39563 gttttaagacaattattcttaatcaggagtgtg 39595

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>emb|AL449264.18| Human DNA sequence from clone RP11-485H8 on chromosome 1 Contains the
             5' end of the CASQ2 gene for calsequestrin 2 (cardiac
             muscle), the NHLH2 gene for nescient helix loop helix 2, a
             heterogeneous nuclear ribonucleoprotein A1 (HNRPA1)
             pseudogene and two CpG islands, complete sequence
          Length = 164655

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1134  atttttgacaaagttacaaaa 1154
             |||||||||||||||||||||
Sbjct: 13799 atttttgacaaagttacaaaa 13779

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>emb|AL359079.15| Human DNA sequence from clone RP13-360B22 on chromosome Xq22.2-23
             Contains the 3' end of the AMMECR1 gene for Alport
             syndrome (mental retardation, midface hypoplasia and
             elliptocytosis, chromosomal region gene 1) (FLJ341111) and
             the 3' end of a novel gene (FLJ22679, FLJ36808), complete
             sequence
          Length = 89267

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1224  tgtggcatggcacaggttgcc 1244
             |||||||||||||||||||||
Sbjct: 41798 tgtggcatggcacaggttgcc 41778

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>emb|AL163541.13| Human DNA sequence from clone RP11-358F13 on chromosome 13, complete
              sequence
          Length = 192305

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2236   ttttaagacattttttcttaa 2256
              |||||||||||||||||||||
Sbjct: 173773 ttttaagacattttttcttaa 173793

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>gb|AF346497.1|AF346497 Photorhabdus luminescens strain W14 toxin complex tca locus, complete
             sequence
          Length = 29974

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 528   caggtgaactacggcaacatc 548
             |||||||||||||||||||||
Sbjct: 16849 caggtgaactacggcaacatc 16869

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>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16
          Length = 348642

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 565    tccgggcgcagggcgcgggcg 585
              |||||||||||||||||||||
Sbjct: 146779 tccgggcgcagggcgcgggcg 146759

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>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14
          Length = 346301

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 565    tccgggcgcagggcgcgggcg 585
              |||||||||||||||||||||
Sbjct: 219773 tccgggcgcagggcgcgggcg 219753

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>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14
          Length = 348866

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 565    tccgggcgcagggcgcgggcg 585
              |||||||||||||||||||||
Sbjct: 270475 tccgggcgcagggcgcgggcg 270495

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>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12
          Length = 349672

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 565   tccgggcgcagggcgcgggcg 585
             |||||||||||||||||||||
Sbjct: 34256 tccgggcgcagggcgcgggcg 34236

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>emb|AL596166.1| Listeria innocua Clip11262 complete genome, segment 4/12
          Length = 260050

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 20     ctccaaacaaccacgcgttta 40
              |||||||||||||||||||||
Sbjct: 237974 ctccaaacaaccacgcgttta 237994

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>emb|BX640496.10| Mouse DNA sequence from clone RP23-379O23 on chromosome 4, complete
             sequence
          Length = 172320

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2228  gtacatagttttaagacattt 2248
             |||||||||||||||||||||
Sbjct: 44675 gtacatagttttaagacattt 44695

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>gb|AC009173.9| Homo sapiens chromosome 16 clone RP11-99H5, complete sequence
          Length = 149842

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1365  aatgcctccatccaatcagct 1385
             |||||||||||||||||||||
Sbjct: 78058 aatgcctccatccaatcagct 78078

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>emb|BX005013.8| Zebrafish DNA sequence from clone DKEY-238G8 in linkage group 17,
             complete sequence
          Length = 164864

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1843  ctgcaaaacctgtagaaaatgaagc 1867
             |||||||| ||||||||||||||||
Sbjct: 36305 ctgcaaaagctgtagaaaatgaagc 36281

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>dbj|AP003395.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-305N23, complete
              sequences
          Length = 205596

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1607   gattccacctgaggcatctat 1627
              |||||||||||||||||||||
Sbjct: 153874 gattccacctgaggcatctat 153854

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>dbj|AP003393.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-196E1, complete
             sequences
          Length = 174303

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1607  gattccacctgaggcatctat 1627
             |||||||||||||||||||||
Sbjct: 33123 gattccacctgaggcatctat 33103

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>gb|DQ314888.1| Homo sapiens v-rel reticuloendotheliosis viral oncogene homolog
            (avian) (REL) gene, complete cds
          Length = 44769

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 2235 gttttaagacattttttcttaatgaggagtgtg 2267
            ||||||||||| || |||||||| |||||||||
Sbjct: 6216 gttttaagacaattattcttaatcaggagtgtg 6248

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>gb|AF046867.1|AF046867 Photorhabdus luminescens insecticidal toxin complex proteins TcaA
            (tcaA), TcaB (tcaB), TcaC (tcaC), and TcaZ (tcaZ) genes,
            complete cds
          Length = 13162

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 528  caggtgaactacggcaacatc 548
            |||||||||||||||||||||
Sbjct: 7653 caggtgaactacggcaacatc 7673

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>ref|XM_763861.1| Giardia lamblia ATCC 50803 hypothetical protein
           (GLP_577_15796_29142) partial mRNA
          Length = 13347

 Score = 42.1 bits (21), Expect = 8.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 755 tccgactgtccatttacttct 775
           |||||||||||||||||||||
Sbjct: 665 tccgactgtccatttacttct 685


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 400,215,245
Number of extensions: 20522622
Number of successful extensions: 102711
Number of sequences better than 10.0: 44
Number of HSP's gapped: 102706
Number of HSP's successfully gapped: 87
Length of query: 2293
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 2270
Effective length of database: 18,503,978,556
Effective search space: 42004031322120
Effective search space used: 42004031322120
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result