ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf179c01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001058700.1| Oryza sativa (japonica cultivar-group) Os04g0176400 (Os04g0176400) mRNA, complete cds Length = 1404 Score = 143 bits (72), Expect = 2e-30 Identities = 202/243 (83%), Gaps = 3/243 (1%) Strand = Plus / Plus Query: 153 ctgcccggcttcaccggacccctgcccttctccctcgaaacagggtacgtggagctggac 212 |||||||| ||| | || |||||||||||||||||||||||||||||||||| | ||| | Sbjct: 124 ctgcccgggttcgctggccccctgcccttctccctcgaaacagggtacgtggcggtgggc 183 Query: 213 gacggcgtccgcctcttctactacttcatccagtcggagcgcgacccggcggaggacccc 272 || |||| | ||||||||||||||||| |||||||| | ||||| |||||||||| Sbjct: 184 ga-ggcga--gattcttctactacttcatcgagtcggagaggagcccggaggaggacccc 240 Query: 273 gtcctgctctggctcaccggcgggccaggctgctccgccctctccggcctcatctacgag 332 |||||||||||||| ||||| ||||| || ||||| ||| ||||||| |||||||||||| Sbjct: 241 gtcctgctctggctgaccggtgggcccggatgctctgccttctccggactcatctacgag 300 Query: 333 gtcggccctttctacttcgacttccatggctacaagggaggcctgcccactctgctctac 392 | |||||| ||| || || || |||||| |||| ||||| |||| ||| ||| |||| Sbjct: 301 attggccctctcttttttgattttcatggccacaaaggagggttgcctactttgcactac 360 Query: 393 aag 395 ||| Sbjct: 361 aag 363 Score = 109 bits (55), Expect = 3e-20 Identities = 97/111 (87%) Strand = Plus / Plus Query: 1310 cacaaggactttctccaacaatctgacatacgcgactgtgaagggtgccggccacacagc 1369 |||||| |||| |||||| || |||||||||| |||||||||||||| || |||||||| Sbjct: 1278 cacaagaacttactccaataacttgacatacgcaactgtgaagggtgctgggcacacagc 1337 Query: 1370 cccggagtacatgcccagggagtgccttgctatgatcgacagatggctttc 1420 ||||||||||||||| | |||||| ||||||||| | || ||||||||||| Sbjct: 1338 cccggagtacatgccaaaggagtgtcttgctatggttgatagatggctttc 1388 Score = 105 bits (53), Expect = 5e-19 Identities = 176/217 (81%) Strand = Plus / Plus Query: 490 ccagcgacacgattgctgttcaacagctgcacattttcctcgaaacgtggtttgatgaac 549 |||| ||||| |||| |||||| ||||| ||| |||| || ||| ||||||||| || | Sbjct: 458 ccagtgacaccattgttgttcaccagctctacactttcatccaaaagtggtttgacgatc 517 Query: 550 atccgcagttcctgccgaatccgctctacatttcgggcgattcgtatagcggcttaatca 609 |||| || ||| ||||||||||||| ||||||| ||||| |||||||| |||| | Sbjct: 518 atccacaattctcctcgaatccgctctatgtttcgggtgattcttatagcggtataatta 577 Query: 610 taccttctcttgctatgaaaatagctaaagggatagaagccggcgatgagcggctcgtta 669 ||||| |||| | ||| ||||||||||||| | |||| || |||| ||||||| ||| Sbjct: 578 tacctactctcaccatggaaatagctaaaggaaaagaatccagcgacgagcggcatctta 637 Query: 670 atctcaagggtgtcattgccggcaatccattgactga 706 ||||||||||| |||||| ||||||||||||||||| Sbjct: 638 atctcaagggttacattgctggcaatccattgactga 674 Score = 101 bits (51), Expect = 8e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 975 gagtcggcagtttcgtctatttgcaggaatgccacatacttcctgtccgagttatggaca 1034 ||||||||||||||||| ||||| ||||||||||| || | |||||| | ||||| || Sbjct: 943 gagtcggcagtttcgtccatttgtaggaatgccacctatgttctgtccaaaatatgggca 1002 Query: 1035 aacgacgaagtcgtaagggagagtttgggtattcataagggaacagt 1081 |||||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 1003 aacgacgaagctgtaagggagagtttgggtattcacaaggggacagt 1049
>ref|NM_001070549.1| Oryza sativa (japonica cultivar-group) Os10g0101100 (Os10g0101100) mRNA, complete cds Length = 1837 Score = 133 bits (67), Expect = 2e-27 Identities = 109/123 (88%) Strand = Plus / Plus Query: 215 cggcgtccgcctcttctactacttcatccagtcggagcgcgacccggcggaggaccccgt 274 |||||| |||||||||||||||||||||| |||||| || |||||| || || ||| | Sbjct: 263 cggcgtgcgcctcttctactacttcatccgctcggagagcagcccggccgacgatcccct 322 Query: 275 cctgctctggctcaccggcgggccaggctgctccgccctctccggcctcatctacgaggt 334 | ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||| Sbjct: 323 cttgctctggctcaccggcgggccaggctgctcggccttctccggcctcgtctacgaggt 382 Query: 335 cgg 337 ||| Sbjct: 383 cgg 385
>gb|AC079632.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0046L02, complete sequence Length = 142381 Score = 133 bits (67), Expect = 2e-27 Identities = 109/123 (88%) Strand = Plus / Minus Query: 215 cggcgtccgcctcttctactacttcatccagtcggagcgcgacccggcggaggaccccgt 274 |||||| |||||||||||||||||||||| |||||| || |||||| || || ||| | Sbjct: 68037 cggcgtgcgcctcttctactacttcatccgctcggagagcagcccggccgacgatcccct 67978 Query: 275 cctgctctggctcaccggcgggccaggctgctccgccctctccggcctcatctacgaggt 334 | ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||| Sbjct: 67977 cttgctctggctcaccggcgggccaggctgctcggccttctccggcctcgtctacgaggt 67918 Query: 335 cgg 337 ||| Sbjct: 67917 cgg 67915 Score = 111 bits (56), Expect = 8e-21 Identities = 95/108 (87%) Strand = Plus / Minus Query: 225 ctcttctactacttcatccagtcggagcgcgacccggcggaggaccccgtcctgctctgg 284 |||||||||||||||||||||||||||||| ||| || || |||||| || | |||||| Sbjct: 81149 ctcttctactacttcatccagtcggagcgcagccccgccgatgaccccctcatcctctgg 81090 Query: 285 ctcaccggcgggccaggctgctccgccctctccggcctcatctacgag 332 |||||||||| || |||||||||||||||||||||||| ||| |||| Sbjct: 81089 atcaccggcggccccggctgctccgccctctccggcctcctcttcgag 81042 Score = 42.1 bits (21), Expect = 6.5 Identities = 48/57 (84%) Strand = Plus / Minus Query: 1359 ggccacacagccccggagtacatgcccagggagtgccttgctatgatcgacagatgg 1415 |||||||| |||||||||||| |||| ||||||||| | ||| ||||||||||| Sbjct: 75371 ggccacaccgccccggagtaccgccccaaggagtgcctcgacatgctcgacagatgg 75315
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 133 bits (67), Expect = 2e-27 Identities = 109/123 (88%) Strand = Plus / Minus Query: 215 cggcgtccgcctcttctactacttcatccagtcggagcgcgacccggcggaggaccccgt 274 |||||| |||||||||||||||||||||| |||||| || |||||| || || ||| | Sbjct: 82143 cggcgtgcgcctcttctactacttcatccgctcggagagcagcccggccgacgatcccct 82084 Query: 275 cctgctctggctcaccggcgggccaggctgctccgccctctccggcctcatctacgaggt 334 | ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||| Sbjct: 82083 cttgctctggctcaccggcgggccaggctgctcggccttctccggcctcgtctacgaggt 82024 Query: 335 cgg 337 ||| Sbjct: 82023 cgg 82021 Score = 111 bits (56), Expect = 8e-21 Identities = 95/108 (87%) Strand = Plus / Minus Query: 225 ctcttctactacttcatccagtcggagcgcgacccggcggaggaccccgtcctgctctgg 284 |||||||||||||||||||||||||||||| ||| || || |||||| || | |||||| Sbjct: 95255 ctcttctactacttcatccagtcggagcgcagccccgccgatgaccccctcatcctctgg 95196 Query: 285 ctcaccggcgggccaggctgctccgccctctccggcctcatctacgag 332 |||||||||| || |||||||||||||||||||||||| ||| |||| Sbjct: 95195 atcaccggcggccccggctgctccgccctctccggcctcctcttcgag 95148 Score = 42.1 bits (21), Expect = 6.5 Identities = 48/57 (84%) Strand = Plus / Minus Query: 1359 ggccacacagccccggagtacatgcccagggagtgccttgctatgatcgacagatgg 1415 |||||||| |||||||||||| |||| ||||||||| | ||| ||||||||||| Sbjct: 89477 ggccacaccgccccggagtaccgccccaaggagtgcctcgacatgctcgacagatgg 89421
>gb|AC166065.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1136E01, complete sequence Length = 105139 Score = 133 bits (67), Expect = 2e-27 Identities = 109/123 (88%) Strand = Plus / Minus Query: 215 cggcgtccgcctcttctactacttcatccagtcggagcgcgacccggcggaggaccccgt 274 |||||| |||||||||||||||||||||| |||||| || |||||| || || ||| | Sbjct: 87282 cggcgtgcgcctcttctactacttcatccgctcggagagcagcccggccgacgatcccct 87223 Query: 275 cctgctctggctcaccggcgggccaggctgctccgccctctccggcctcatctacgaggt 334 | ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||| Sbjct: 87222 cttgctctggctcaccggcgggccaggctgctcggccttctccggcctcgtctacgaggt 87163 Query: 335 cgg 337 ||| Sbjct: 87162 cgg 87160 Score = 111 bits (56), Expect = 8e-21 Identities = 95/108 (87%) Strand = Plus / Minus Query: 225 ctcttctactacttcatccagtcggagcgcgacccggcggaggaccccgtcctgctctgg 284 |||||||||||||||||||||||||||||| ||| || || |||||| || | |||||| Sbjct: 100394 ctcttctactacttcatccagtcggagcgcagccccgccgatgaccccctcatcctctgg 100335 Query: 285 ctcaccggcgggccaggctgctccgccctctccggcctcatctacgag 332 |||||||||| || |||||||||||||||||||||||| ||| |||| Sbjct: 100334 atcaccggcggccccggctgctccgccctctccggcctcctcttcgag 100287 Score = 42.1 bits (21), Expect = 6.5 Identities = 48/57 (84%) Strand = Plus / Minus Query: 1359 ggccacacagccccggagtacatgcccagggagtgccttgctatgatcgacagatgg 1415 |||||||| |||||||||||| |||| ||||||||| | ||| ||||||||||| Sbjct: 94616 ggccacaccgccccggagtaccgccccaaggagtgcctcgacatgctcgacagatgg 94560
>gb|AC108883.1| Genomic sequence for (japonica cultivar-group) cultivar Nipponbare clone OJ1136E01, from chromosome 10, complete sequence Length = 113856 Score = 133 bits (67), Expect = 2e-27 Identities = 109/123 (88%) Strand = Plus / Plus Query: 215 cggcgtccgcctcttctactacttcatccagtcggagcgcgacccggcggaggaccccgt 274 |||||| |||||||||||||||||||||| |||||| || |||||| || || ||| | Sbjct: 31714 cggcgtgcgcctcttctactacttcatccgctcggagagcagcccggccgacgatcccct 31773 Query: 275 cctgctctggctcaccggcgggccaggctgctccgccctctccggcctcatctacgaggt 334 | ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||| Sbjct: 31774 cttgctctggctcaccggcgggccaggctgctcggccttctccggcctcgtctacgaggt 31833 Query: 335 cgg 337 ||| Sbjct: 31834 cgg 31836 Score = 111 bits (56), Expect = 8e-21 Identities = 95/108 (87%) Strand = Plus / Plus Query: 225 ctcttctactacttcatccagtcggagcgcgacccggcggaggaccccgtcctgctctgg 284 |||||||||||||||||||||||||||||| ||| || || |||||| || | |||||| Sbjct: 18602 ctcttctactacttcatccagtcggagcgcagccccgccgatgaccccctcatcctctgg 18661 Query: 285 ctcaccggcgggccaggctgctccgccctctccggcctcatctacgag 332 |||||||||| || |||||||||||||||||||||||| ||| |||| Sbjct: 18662 atcaccggcggccccggctgctccgccctctccggcctcctcttcgag 18709 Score = 42.1 bits (21), Expect = 6.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 1359 ggccacacagccccggagtacatgcccagggagtgccttgctatgatcgacagatgg 1415 |||||||| |||||||||||| |||| ||||||||| | ||| ||||||||||| Sbjct: 24380 ggccacaccgccccggagtaccgccccaaggagtgcctcgacatgctcgacagatgg 24436
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 133 bits (67), Expect = 2e-27 Identities = 109/123 (88%) Strand = Plus / Minus Query: 215 cggcgtccgcctcttctactacttcatccagtcggagcgcgacccggcggaggaccccgt 274 |||||| |||||||||||||||||||||| |||||| || |||||| || || ||| | Sbjct: 82143 cggcgtgcgcctcttctactacttcatccgctcggagagcagcccggccgacgatcccct 82084 Query: 275 cctgctctggctcaccggcgggccaggctgctccgccctctccggcctcatctacgaggt 334 | ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||| Sbjct: 82083 cttgctctggctcaccggcgggccaggctgctcggccttctccggcctcgtctacgaggt 82024 Query: 335 cgg 337 ||| Sbjct: 82023 cgg 82021 Score = 111 bits (56), Expect = 8e-21 Identities = 95/108 (87%) Strand = Plus / Minus Query: 225 ctcttctactacttcatccagtcggagcgcgacccggcggaggaccccgtcctgctctgg 284 |||||||||||||||||||||||||||||| ||| || || |||||| || | |||||| Sbjct: 95255 ctcttctactacttcatccagtcggagcgcagccccgccgatgaccccctcatcctctgg 95196 Query: 285 ctcaccggcgggccaggctgctccgccctctccggcctcatctacgag 332 |||||||||| || |||||||||||||||||||||||| ||| |||| Sbjct: 95195 atcaccggcggccccggctgctccgccctctccggcctcctcttcgag 95148 Score = 42.1 bits (21), Expect = 6.5 Identities = 48/57 (84%) Strand = Plus / Minus Query: 1359 ggccacacagccccggagtacatgcccagggagtgccttgctatgatcgacagatgg 1415 |||||||| |||||||||||| |||| ||||||||| | ||| ||||||||||| Sbjct: 89477 ggccacaccgccccggagtaccgccccaaggagtgcctcgacatgctcgacagatgg 89421
>dbj|AK106667.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-H08, full insert sequence Length = 1837 Score = 133 bits (67), Expect = 2e-27 Identities = 109/123 (88%) Strand = Plus / Plus Query: 215 cggcgtccgcctcttctactacttcatccagtcggagcgcgacccggcggaggaccccgt 274 |||||| |||||||||||||||||||||| |||||| || |||||| || || ||| | Sbjct: 263 cggcgtgcgcctcttctactacttcatccgctcggagagcagcccggccgacgatcccct 322 Query: 275 cctgctctggctcaccggcgggccaggctgctccgccctctccggcctcatctacgaggt 334 | ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||| Sbjct: 323 cttgctctggctcaccggcgggccaggctgctcggccttctccggcctcgtctacgaggt 382 Query: 335 cgg 337 ||| Sbjct: 383 cgg 385
>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0041L19, complete sequence Length = 155086 Score = 121 bits (61), Expect = 9e-24 Identities = 113/129 (87%), Gaps = 6/129 (4%) Strand = Plus / Plus Query: 215 cggcgtccgcctcttctactacttcatccagtcggagcgc-gacccggcg-----gagga 268 ||||||||||||||||||||||||||||| ||||||||| | |||| || || || Sbjct: 131015 cggcgtccgcctcttctactacttcatccgctcggagcgccgccccgccgccgacgacga 131074 Query: 269 ccccgtcctgctctggctcaccggcgggccaggctgctccgccctctccggcctcatcta 328 |||| |||||||||||||||||||||| || |||||||||||| ||||||||||| |||| Sbjct: 131075 ccccctcctgctctggctcaccggcggccccggctgctccgccttctccggcctcgtcta 131134 Query: 329 cgaggtcgg 337 ||||||||| Sbjct: 131135 cgaggtcgg 131143
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 121 bits (61), Expect = 9e-24 Identities = 113/129 (87%), Gaps = 6/129 (4%) Strand = Plus / Plus Query: 215 cggcgtccgcctcttctactacttcatccagtcggagcgc-gacccggcg-----gagga 268 ||||||||||||||||||||||||||||| ||||||||| | |||| || || || Sbjct: 24654113 cggcgtccgcctcttctactacttcatccgctcggagcgccgccccgccgccgacgacga 24654172 Query: 269 ccccgtcctgctctggctcaccggcgggccaggctgctccgccctctccggcctcatcta 328 |||| |||||||||||||||||||||| || |||||||||||| ||||||||||| |||| Sbjct: 24654173 ccccctcctgctctggctcaccggcggccccggctgctccgccttctccggcctcgtcta 24654232 Query: 329 cgaggtcgg 337 ||||||||| Sbjct: 24654233 cgaggtcgg 24654241 Score = 58.0 bits (29), Expect = 1e-04 Identities = 61/69 (88%), Gaps = 2/69 (2%) Strand = Plus / Minus Query: 228 ttctactacttcatccagtcggagcgcgacccggcggag-gaccccgtcctgctctggct 286 ||||||||||| ||| |||||||| |||||| | |||| ||||||||||| |||||||| Sbjct: 13262015 ttctactacttaatcgagtcggagggcgacctcg-ggagcgaccccgtcctcctctggct 13261957 Query: 287 caccggcgg 295 ||||||||| Sbjct: 13261956 caccggcgg 13261948 Score = 56.0 bits (28), Expect = 4e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 228 ttctactacttcatccagtcggagcgcgacccggcggaggaccccgtcctgctctggctc 287 ||||||||||||||| |||||||| ||||||| | | ||||||||||| |||||| || Sbjct: 13400352 ttctactacttcatcgagtcggagggcgaccccggcgccgaccccgtcctcctctggatc 13400293 Query: 288 accggcgg 295 | |||||| Sbjct: 13400292 aacggcgg 13400285 Score = 50.1 bits (25), Expect = 0.027 Identities = 28/29 (96%) Strand = Plus / Minus Query: 267 gaccccgtcctgctctggctcaccggcgg 295 ||||||||||| ||||||||||||||||| Sbjct: 13206086 gaccccgtcctcctctggctcaccggcgg 13206058 Score = 50.1 bits (25), Expect = 0.027 Identities = 28/29 (96%) Strand = Plus / Minus Query: 267 gaccccgtcctgctctggctcaccggcgg 295 ||||||||||| ||||||||||||||||| Sbjct: 13289871 gaccccgtcctcctctggctcaccggcgg 13289843 Score = 48.1 bits (24), Expect = 0.11 Identities = 30/32 (93%) Strand = Plus / Minus Query: 228 ttctactacttcatccagtcggagcgcgaccc 259 ||||||||||||||| |||||||| ||||||| Sbjct: 13336282 ttctactacttcatcgagtcggagggcgaccc 13336251 Score = 42.1 bits (21), Expect = 6.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 730 gaattccatttcttcatgggatgggaattataccagatgaa 770 ||||||||||||| ||||| |||||| ||||| | |||||| Sbjct: 15113054 gaattccatttctgcatggcatgggacttatatctgatgaa 15113094
>ref|NM_001070550.1| Oryza sativa (japonica cultivar-group) Os10g0101200 (Os10g0101200) mRNA, complete cds Length = 1653 Score = 113 bits (57), Expect = 2e-21 Identities = 102/117 (87%) Strand = Plus / Plus Query: 225 ctcttctactacttcatccagtcggagcgcgacccggcggaggaccccgtcctgctctgg 284 |||||||||||||||||||||||||||||| ||| || || |||||| || | |||||| Sbjct: 230 ctcttctactacttcatccagtcggagcgcagccccgccgatgaccccctcatcctctgg 289 Query: 285 ctcaccggcgggccaggctgctccgccctctccggcctcatctacgaggtcggccct 341 |||||||||| || |||||||||||||||||||||||| ||| |||| | |||||| Sbjct: 290 atcaccggcggccccggctgctccgccctctccggcctcctcttcgagattggccct 346 Score = 42.1 bits (21), Expect = 6.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 1359 ggccacacagccccggagtacatgcccagggagtgccttgctatgatcgacagatgg 1415 |||||||| |||||||||||| |||| ||||||||| | ||| ||||||||||| Sbjct: 1346 ggccacaccgccccggagtaccgccccaaggagtgcctcgacatgctcgacagatgg 1402
>dbj|AK104807.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-E08, full insert sequence Length = 1605 Score = 113 bits (57), Expect = 2e-21 Identities = 102/117 (87%) Strand = Plus / Plus Query: 225 ctcttctactacttcatccagtcggagcgcgacccggcggaggaccccgtcctgctctgg 284 |||||||||||||||||||||||||||||| ||| || || |||||| || | |||||| Sbjct: 228 ctcttctactacttcatccagtcggagcgcagccccgccgatgaccccctcatcctctgg 287 Query: 285 ctcaccggcgggccaggctgctccgccctctccggcctcatctacgaggtcggccct 341 |||||||||| || |||||||||||||||||||||||| ||| |||| | |||||| Sbjct: 288 atcaccggcggccccggctgctccgccctctccggcctcctcttcgagattggccct 344 Score = 42.1 bits (21), Expect = 6.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 1359 ggccacacagccccggagtacatgcccagggagtgccttgctatgatcgacagatgg 1415 |||||||| |||||||||||| |||| ||||||||| | ||| ||||||||||| Sbjct: 1344 ggccacaccgccccggagtaccgccccaaggagtgcctcgacatgctcgacagatgg 1400
>dbj|AK072954.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149K09, full insert sequence Length = 1655 Score = 113 bits (57), Expect = 2e-21 Identities = 102/117 (87%) Strand = Plus / Plus Query: 225 ctcttctactacttcatccagtcggagcgcgacccggcggaggaccccgtcctgctctgg 284 |||||||||||||||||||||||||||||| ||| || || |||||| || | |||||| Sbjct: 231 ctcttctactacttcatccagtcggagcgcagccccgccgatgaccccctcatcctctgg 290 Query: 285 ctcaccggcgggccaggctgctccgccctctccggcctcatctacgaggtcggccct 341 |||||||||| || |||||||||||||||||||||||| ||| |||| | |||||| Sbjct: 291 atcaccggcggccccggctgctccgccctctccggcctcctcttcgagattggccct 347 Score = 42.1 bits (21), Expect = 6.5 Identities = 48/57 (84%) Strand = Plus / Plus Query: 1359 ggccacacagccccggagtacatgcccagggagtgccttgctatgatcgacagatgg 1415 |||||||| |||||||||||| |||| ||||||||| | ||| ||||||||||| Sbjct: 1347 ggccacaccgccccggagtaccgccccaaggagtgcctcgacatgctcgacagatgg 1403
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 109 bits (55), Expect = 3e-20 Identities = 94/107 (87%) Strand = Plus / Minus Query: 226 tcttctactacttcatccagtcggagcgcgacccggcggaggaccccgtcctgctctggc 285 ||||||||||||||||| |||||||| | ||||| ||||||||||||||||||||||| Sbjct: 5179805 tcttctactacttcatcgagtcggagaggagcccggaggaggaccccgtcctgctctggc 5179746 Query: 286 tcaccggcgggccaggctgctccgccctctccggcctcatctacgag 332 | ||||| ||||| || ||||| ||| ||||||| |||||||||||| Sbjct: 5179745 tgaccggtgggcccggatgctctgccttctccggactcatctacgag 5179699 Score = 75.8 bits (38), Expect = 5e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 1351 agggtgccggccacacagccccggagtacatgcccagggagtgccttgctatgatcgaca 1410 ||||||| || ||||||||||||||||||||||| | |||||| ||||||||| | || | Sbjct: 5174803 agggtgctgggcacacagccccggagtacatgccaaaggagtgtcttgctatggttgata 5174744 Query: 1411 gatggctttc 1420 |||||||||| Sbjct: 5174743 gatggctttc 5174734 Score = 63.9 bits (32), Expect = 2e-06 Identities = 44/48 (91%) Strand = Plus / Minus Query: 1027 tatggacaaacgacgaagtcgtaagggagagtttgggtattcataagg 1074 ||||| |||||||||||| ||||||||||||||||||||||| |||| Sbjct: 5176564 tatgggcaaacgacgaagctgtaagggagagtttgggtattcacaagg 5176517 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Minus Query: 245 gtcggagcgcgacccggcggaggaccccgtcctgctctggctcaccggcgggccaggctg 304 ||||||||||||| |||||| ||||||||| |||||||||||| |||||| || || || Sbjct: 14860944 gtcggagcgcgacgcggcggccgaccccgtcgtgctctggctcaacggcggcccgggatg 14860885 Query: 305 ctcc 308 |||| Sbjct: 14860884 ctcc 14860881 Score = 61.9 bits (31), Expect = 7e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 153 ctgcccggcttcaccggacccctgcccttctccctcgaaacagggta 199 |||||||| ||| | || ||||||||||||||||||||||||||||| Sbjct: 5180994 ctgcccgggttcgctggccccctgcccttctccctcgaaacagggta 5180948 Score = 56.0 bits (28), Expect = 4e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 565 cgaatccgctctacatttcgggcgattcgtatagcggcttaatcataccttctcttgcta 624 ||||||||||||| ||||||| ||||| |||||||| |||| |||||| |||| | | Sbjct: 5178059 cgaatccgctctatgtttcgggtgattcttatagcggtataattatacctactctcacca 5178000 Query: 625 tgaaaatagctaaagg 640 || ||||||||||||| Sbjct: 5177999 tggaaatagctaaagg 5177984
>emb|AL606993.2|OSJN00121 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0051N19, complete sequence Length = 49800 Score = 109 bits (55), Expect = 3e-20 Identities = 94/107 (87%) Strand = Plus / Minus Query: 226 tcttctactacttcatccagtcggagcgcgacccggcggaggaccccgtcctgctctggc 285 ||||||||||||||||| |||||||| | ||||| ||||||||||||||||||||||| Sbjct: 14210 tcttctactacttcatcgagtcggagaggagcccggaggaggaccccgtcctgctctggc 14151 Query: 286 tcaccggcgggccaggctgctccgccctctccggcctcatctacgag 332 | ||||| ||||| || ||||| ||| ||||||| |||||||||||| Sbjct: 14150 tgaccggtgggcccggatgctctgccttctccggactcatctacgag 14104 Score = 75.8 bits (38), Expect = 5e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 1351 agggtgccggccacacagccccggagtacatgcccagggagtgccttgctatgatcgaca 1410 ||||||| || ||||||||||||||||||||||| | |||||| ||||||||| | || | Sbjct: 9208 agggtgctgggcacacagccccggagtacatgccaaaggagtgtcttgctatggttgata 9149 Query: 1411 gatggctttc 1420 |||||||||| Sbjct: 9148 gatggctttc 9139 Score = 63.9 bits (32), Expect = 2e-06 Identities = 44/48 (91%) Strand = Plus / Minus Query: 1027 tatggacaaacgacgaagtcgtaagggagagtttgggtattcataagg 1074 ||||| |||||||||||| ||||||||||||||||||||||| |||| Sbjct: 10969 tatgggcaaacgacgaagctgtaagggagagtttgggtattcacaagg 10922 Score = 61.9 bits (31), Expect = 7e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 153 ctgcccggcttcaccggacccctgcccttctccctcgaaacagggta 199 |||||||| ||| | || ||||||||||||||||||||||||||||| Sbjct: 15399 ctgcccgggttcgctggccccctgcccttctccctcgaaacagggta 15353 Score = 56.0 bits (28), Expect = 4e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 565 cgaatccgctctacatttcgggcgattcgtatagcggcttaatcataccttctcttgcta 624 ||||||||||||| ||||||| ||||| |||||||| |||| |||||| |||| | | Sbjct: 12464 cgaatccgctctatgtttcgggtgattcttatagcggtataattatacctactctcacca 12405 Query: 625 tgaaaatagctaaagg 640 || ||||||||||||| Sbjct: 12404 tggaaatagctaaagg 12389
>ref|NM_001073042.1| Oryza sativa (japonica cultivar-group) Os12g0257000 (Os12g0257000) mRNA, complete cds Length = 1796 Score = 81.8 bits (41), Expect = 8e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 244 agtcggagcgcgacccggcggaggaccccgtcctgctctggctcaccggcgggccaggct 303 |||||||||||||||||||| |||||||| || |||||||||||| |||||| || |||| Sbjct: 276 agtcggagcgcgacccggcgaaggaccccctcgtgctctggctcaacggcggccccggct 335 Query: 304 gctcc 308 ||||| Sbjct: 336 gctcc 340
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 81.8 bits (41), Expect = 8e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 244 agtcggagcgcgacccggcggaggaccccgtcctgctctggctcaccggcgggccaggct 303 |||||||||||||||||||| |||||||| || |||||||||||| |||||| || |||| Sbjct: 8833187 agtcggagcgcgacccggcgaaggaccccctcgtgctctggctcaacggcggccccggct 8833128 Query: 304 gctcc 308 ||||| Sbjct: 8833127 gctcc 8833123
>dbj|AK064874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J10, full insert sequence Length = 1797 Score = 81.8 bits (41), Expect = 8e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 244 agtcggagcgcgacccggcggaggaccccgtcctgctctggctcaccggcgggccaggct 303 |||||||||||||||||||| |||||||| || |||||||||||| |||||| || |||| Sbjct: 277 agtcggagcgcgacccggcgaaggaccccctcgtgctctggctcaacggcggccccggct 336 Query: 304 gctcc 308 ||||| Sbjct: 337 gctcc 341
>dbj|D17586.1|RICCBPI Oryza sativa (japonica cultivar-group) gene for serine carboxypeptidase I, complete cds Length = 6399 Score = 81.8 bits (41), Expect = 8e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 244 agtcggagcgcgacccggcggaggaccccgtcctgctctggctcaccggcgggccaggct 303 |||||||||||||||||||| |||||||| || |||||||||||| |||||| || |||| Sbjct: 920 agtcggagcgcgacccggcgaaggaccccctcgtgctctggctcaacggcggccccggct 979 Query: 304 gctcc 308 ||||| Sbjct: 980 gctcc 984
>emb|AL954154.5|CNS08CCS Oryza sativa chromosome 12, . BAC OSJNBb0072E04 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151176 Score = 81.8 bits (41), Expect = 8e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 244 agtcggagcgcgacccggcggaggaccccgtcctgctctggctcaccggcgggccaggct 303 |||||||||||||||||||| |||||||| || |||||||||||| |||||| || |||| Sbjct: 21816 agtcggagcgcgacccggcgaaggaccccctcgtgctctggctcaacggcggccccggct 21757 Query: 304 gctcc 308 ||||| Sbjct: 21756 gctcc 21752
>emb|AL928776.4|CNS08CC6 Oryza sativa chromosome 12, . BAC OSJNBa0036A15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 195500 Score = 81.8 bits (41), Expect = 8e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 244 agtcggagcgcgacccggcggaggaccccgtcctgctctggctcaccggcgggccaggct 303 |||||||||||||||||||| |||||||| || |||||||||||| |||||| || |||| Sbjct: 8982 agtcggagcgcgacccggcgaaggaccccctcgtgctctggctcaacggcggccccggct 9041 Query: 304 gctcc 308 ||||| Sbjct: 9042 gctcc 9046
>emb|Y09603.1|HVCPI H.vulgare mRNA for serine carboxypeptidase I, CP-MI Length = 1885 Score = 73.8 bits (37), Expect = 2e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 244 agtcggagcgcgacccggcggaggaccccgtcctgctctggctcaccggcgggccaggct 303 |||||||||||||||||| ||||||||||| |||||||||||| |||||| || |||| Sbjct: 300 agtcggagcgcgacccgggcaaggaccccgtcgtgctctggctcaacggcggccccggct 359 Query: 304 gctcc 308 ||||| Sbjct: 360 gctcc 364
>gb|BT018808.1| Zea mays clone EL01N0529H08.d mRNA sequence Length = 1840 Score = 65.9 bits (33), Expect = 5e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 244 agtcggagcgcgacccggcggaggaccccgtcctgctctggctcaccggcgggccaggct 303 ||||||||||||||||||| |||||| ||| |||||||||||| |||||| || |||| Sbjct: 245 agtcggagcgcgacccggcccgggaccctgtcgtgctctggctcaacggcggccccggct 304 Query: 304 gctcc 308 ||||| Sbjct: 305 gctcc 309
>ref|NM_001058999.1| Oryza sativa (japonica cultivar-group) Os04g0321700 (Os04g0321700) mRNA, complete cds Length = 1742 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 245 gtcggagcgcgacccggcggaggaccccgtcctgctctggctcaccggcgggccaggctg 304 ||||||||||||| |||||| ||||||||| |||||||||||| |||||| || || || Sbjct: 286 gtcggagcgcgacgcggcggccgaccccgtcgtgctctggctcaacggcggcccgggatg 345 Query: 305 ctcc 308 |||| Sbjct: 346 ctcc 349
>emb|AL663005.3|OSJN00208 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062H02, complete sequence Length = 166747 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Minus Query: 245 gtcggagcgcgacccggcggaggaccccgtcctgctctggctcaccggcgggccaggctg 304 ||||||||||||| |||||| ||||||||| |||||||||||| |||||| || || || Sbjct: 17682 gtcggagcgcgacgcggcggccgaccccgtcgtgctctggctcaacggcggcccgggatg 17623 Query: 305 ctcc 308 |||| Sbjct: 17622 ctcc 17619
>dbj|AK099397.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M18, full insert sequence Length = 1665 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 245 gtcggagcgcgacccggcggaggaccccgtcctgctctggctcaccggcgggccaggctg 304 ||||||||||||| |||||| ||||||||| |||||||||||| |||||| || || || Sbjct: 239 gtcggagcgcgacgcggcggccgaccccgtcgtgctctggctcaacggcggcccgggatg 298 Query: 305 ctcc 308 |||| Sbjct: 299 ctcc 302
>dbj|AK068732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159H01, full insert sequence Length = 1745 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 245 gtcggagcgcgacccggcggaggaccccgtcctgctctggctcaccggcgggccaggctg 304 ||||||||||||| |||||| ||||||||| |||||||||||| |||||| || || || Sbjct: 287 gtcggagcgcgacgcggcggccgaccccgtcgtgctctggctcaacggcggcccgggatg 346 Query: 305 ctcc 308 |||| Sbjct: 347 ctcc 350
>gb|BT016581.1| Zea mays clone Contig414 mRNA sequence Length = 1736 Score = 60.0 bits (30), Expect = 3e-05 Identities = 81/98 (82%) Strand = Plus / Plus Query: 225 ctcttctactacttcatccagtcggagcgcgacccggcggaggaccccgtcctgctctgg 284 ||||||||||||||| | | |||||||||||||| |||||||| | ||||| ||| Sbjct: 199 ctcttctactacttcgtgcgctcggagcgcgacccctacgaggacccgctgctgctgtgg 258 Query: 285 ctcaccggcgggccaggctgctccgccctctccggcct 322 || ||||||| ||||||||||||| | |||||||||| Sbjct: 259 ctgtccggcggcccaggctgctccggcatctccggcct 296 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 180 ttctccctcgaaacagggtacgtggagctggacga 214 |||| ||||||||| |||||||||||| ||||||| Sbjct: 148 ttctacctcgaaaccgggtacgtggaggtggacga 182
>gb|AC120536.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0035N09, complete sequence Length = 129468 Score = 58.0 bits (29), Expect = 1e-04 Identities = 61/69 (88%), Gaps = 2/69 (2%) Strand = Plus / Minus Query: 228 ttctactacttcatccagtcggagcgcgacccggcggag-gaccccgtcctgctctggct 286 ||||||||||| ||| |||||||| |||||| | |||| ||||||||||| |||||||| Sbjct: 80826 ttctactacttaatcgagtcggagggcgacctcg-ggagcgaccccgtcctcctctggct 80768 Query: 287 caccggcgg 295 ||||||||| Sbjct: 80767 caccggcgg 80759 Score = 50.1 bits (25), Expect = 0.027 Identities = 28/29 (96%) Strand = Plus / Minus Query: 267 gaccccgtcctgctctggctcaccggcgg 295 ||||||||||| ||||||||||||||||| Sbjct: 24897 gaccccgtcctcctctggctcaccggcgg 24869 Score = 50.1 bits (25), Expect = 0.027 Identities = 28/29 (96%) Strand = Plus / Minus Query: 267 gaccccgtcctgctctggctcaccggcgg 295 ||||||||||| ||||||||||||||||| Sbjct: 108682 gaccccgtcctcctctggctcaccggcgg 108654
>ref|NM_001074328.1| Oryza sativa (japonica cultivar-group) Os11g0432900 (Os11g0432900) mRNA, complete cds Length = 1734 Score = 56.0 bits (28), Expect = 4e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 228 ttctactacttcatccagtcggagcgcgacccggcggaggaccccgtcctgctctggctc 287 ||||||||||||||| |||||||| ||||||| | | ||||||||||| |||||| || Sbjct: 268 ttctactacttcatcgagtcggagggcgaccccggcgccgaccccgtcctcctctggatc 327 Query: 288 accggcgg 295 | |||||| Sbjct: 328 aacggcgg 335
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 56.0 bits (28), Expect = 4e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 226 tcttctactacttcatccagtcggagcg 253 |||||||||||||||||||||||||||| Sbjct: 138276 tcttctactacttcatccagtcggagcg 138303 Score = 52.0 bits (26), Expect = 0.007 Identities = 29/30 (96%) Strand = Plus / Plus Query: 303 tgctccgccctctccggcctcatctacgag 332 ||||||||||||||||||||| |||||||| Sbjct: 138352 tgctccgccctctccggcctcgtctacgag 138381
>gb|AC128642.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OJ1115_A03 map S20262S, complete sequence Length = 149553 Score = 56.0 bits (28), Expect = 4e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 228 ttctactacttcatccagtcggagcgcgacccggcggaggaccccgtcctgctctggctc 287 ||||||||||||||| |||||||| ||||||| | | ||||||||||| |||||| || Sbjct: 116705 ttctactacttcatcgagtcggagggcgaccccggcgccgaccccgtcctcctctggatc 116646 Query: 288 accggcgg 295 | |||||| Sbjct: 116645 aacggcgg 116638 Score = 50.1 bits (25), Expect = 0.027 Identities = 28/29 (96%) Strand = Plus / Minus Query: 267 gaccccgtcctgctctggctcaccggcgg 295 ||||||||||| ||||||||||||||||| Sbjct: 6224 gaccccgtcctcctctggctcaccggcgg 6196 Score = 48.1 bits (24), Expect = 0.11 Identities = 30/32 (93%) Strand = Plus / Minus Query: 228 ttctactacttcatccagtcggagcgcgaccc 259 ||||||||||||||| |||||||| ||||||| Sbjct: 52635 ttctactacttcatcgagtcggagggcgaccc 52604
>dbj|AK069378.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012E22, full insert sequence Length = 1734 Score = 56.0 bits (28), Expect = 4e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 228 ttctactacttcatccagtcggagcgcgacccggcggaggaccccgtcctgctctggctc 287 ||||||||||||||| |||||||| ||||||| | | ||||||||||| |||||| || Sbjct: 269 ttctactacttcatcgagtcggagggcgaccccggcgccgaccccgtcctcctctggatc 328 Query: 288 accggcgg 295 | |||||| Sbjct: 329 aacggcgg 336
>emb|CT837582.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA108C02, full insert sequence Length = 1481 Score = 50.1 bits (25), Expect = 0.027 Identities = 28/29 (96%) Strand = Plus / Plus Query: 267 gaccccgtcctgctctggctcaccggcgg 295 ||||||||||| ||||||||||||||||| Sbjct: 274 gaccccgtcctcctctggctcaccggcgg 302
>dbj|AK241620.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065186H23, full insert sequence Length = 2457 Score = 50.1 bits (25), Expect = 0.027 Identities = 28/29 (96%) Strand = Plus / Plus Query: 267 gaccccgtcctgctctggctcaccggcgg 295 ||||||||||| ||||||||||||||||| Sbjct: 303 gaccccgtcctcctctggctcaccggcgg 331
>ref|NM_001074323.1| Oryza sativa (japonica cultivar-group) Os11g0431400 (Os11g0431400) mRNA, complete cds Length = 1245 Score = 50.1 bits (25), Expect = 0.027 Identities = 28/29 (96%) Strand = Plus / Plus Query: 267 gaccccgtcctgctctggctcaccggcgg 295 ||||||||||| ||||||||||||||||| Sbjct: 268 gaccccgtcctcctctggctcaccggcgg 296
>ref|NM_001074320.1| Oryza sativa (japonica cultivar-group) Os11g0430000 (Os11g0430000) mRNA, complete cds Length = 516 Score = 50.1 bits (25), Expect = 0.027 Identities = 28/29 (96%) Strand = Plus / Plus Query: 267 gaccccgtcctgctctggctcaccggcgg 295 ||||||||||| ||||||||||||||||| Sbjct: 235 gaccccgtcctcctctggctcaccggcgg 263
>ref|NM_001074324.1| Oryza sativa (japonica cultivar-group) Os11g0431700 (Os11g0431700) mRNA, complete cds Length = 1523 Score = 48.1 bits (24), Expect = 0.11 Identities = 30/32 (93%) Strand = Plus / Plus Query: 228 ttctactacttcatccagtcggagcgcgaccc 259 ||||||||||||||| |||||||| ||||||| Sbjct: 226 ttctactacttcatcgagtcggagggcgaccc 257
>dbj|AK111439.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-A05, full insert sequence Length = 1523 Score = 48.1 bits (24), Expect = 0.11 Identities = 30/32 (93%) Strand = Plus / Plus Query: 228 ttctactacttcatccagtcggagcgcgaccc 259 ||||||||||||||| |||||||| ||||||| Sbjct: 226 ttctactacttcatcgagtcggagggcgaccc 257
>ref|NM_001074392.1| Oryza sativa (japonica cultivar-group) Os11g0460800 (Os11g0460800) mRNA, complete cds Length = 1832 Score = 46.1 bits (23), Expect = 0.42 Identities = 29/31 (93%) Strand = Plus / Plus Query: 175 tgcccttctccctcgaaacagggtacgtgga 205 |||| |||||||||||||| ||||||||||| Sbjct: 399 tgccattctccctcgaaaccgggtacgtgga 429 Score = 42.1 bits (21), Expect = 6.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 730 gaattccatttcttcatgggatgggaattataccagatgaa 770 ||||||||||||| ||||| |||||| ||||| | |||||| Sbjct: 963 gaattccatttctgcatggcatgggacttatatctgatgaa 1003
>gb|AC157931.11| Mus musculus chromosome 5, clone RP24-159I10, complete sequence Length = 147518 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1482 atagataagagaatatatatata 1504 ||||||||||||||||||||||| Sbjct: 5607 atagataagagaatatatatata 5629
>gb|AC113504.10| Mus musculus chromosome 5, clone RP23-370G17, complete sequence Length = 219617 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1482 atagataagagaatatatatata 1504 ||||||||||||||||||||||| Sbjct: 139820 atagataagagaatatatatata 139842
>dbj|AK066902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B20, full insert sequence Length = 1835 Score = 46.1 bits (23), Expect = 0.42 Identities = 29/31 (93%) Strand = Plus / Plus Query: 175 tgcccttctccctcgaaacagggtacgtgga 205 |||| |||||||||||||| ||||||||||| Sbjct: 402 tgccattctccctcgaaaccgggtacgtgga 432 Score = 42.1 bits (21), Expect = 6.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 730 gaattccatttcttcatgggatgggaattataccagatgaa 770 ||||||||||||| ||||| |||||| ||||| | |||||| Sbjct: 966 gaattccatttctgcatggcatgggacttatatctgatgaa 1006
>gb|J02817.1|WHTGIR Wheat gibberellin responsive protein gene, complete cds Length = 5315 Score = 46.1 bits (23), Expect = 0.42 Identities = 38/43 (88%) Strand = Plus / Plus Query: 263 ggaggaccccgtcctgctctggctcaccggcgggccaggctgc 305 |||||||||||| || |||||||||||||||| || |||||| Sbjct: 1569 ggaggaccccgtggtgatctggctcaccggcggcccgggctgc 1611
>gb|CP000210.2| Drosophila melanogaster genomic scaffold 211000022280749 Length = 444310 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1563 gtggtcacttccattgagatta 1584 |||||||||||||||||||||| Sbjct: 378486 gtggtcacttccattgagatta 378507
>gb|AC174142.10| Medicago truncatula clone mth2-69j4, complete sequence Length = 117792 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1488 aagagaatatatatataagatg 1509 |||||||||||||||||||||| Sbjct: 27424 aagagaatatatatataagatg 27445
>gb|AY497024.1| Trichophyton rubrum carboxypeptidase Y gene, complete cds Length = 1680 Score = 44.1 bits (22), Expect = 1.7 Identities = 34/38 (89%) Strand = Plus / Plus Query: 270 cccgtcctgctctggctcaccggcgggccaggctgctc 307 |||||| | |||||||||| |||||| ||||||||||| Sbjct: 550 cccgtcgtcctctggctcaacggcggcccaggctgctc 587
>gb|AC149636.14| Medicago truncatula clone mth2-180a12, complete sequence Length = 139348 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1488 aagagaatatatatataagatg 1509 |||||||||||||||||||||| Sbjct: 7481 aagagaatatatatataagatg 7502
>gb|AC125406.4| Mus musculus BAC clone RP23-32C18 from chromosome 19, complete sequence Length = 208557 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 824 ctcccattgtgccaattccctt 845 |||||||||||||||||||||| Sbjct: 48393 ctcccattgtgccaattccctt 48414
>gb|AC165168.3| Mus musculus BAC clone RP23-12D3 from chromosome 19, complete sequence Length = 215151 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 824 ctcccattgtgccaattccctt 845 |||||||||||||||||||||| Sbjct: 177008 ctcccattgtgccaattccctt 177029
>dbj|AK088780.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430025N19 product:membrane-spanning 4-domains, subfamily A, member 4B, full insert sequence Length = 799 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 824 ctcccattgtgccaattccctt 845 |||||||||||||||||||||| Sbjct: 731 ctcccattgtgccaattccctt 710
>gb|AC107934.3| Homo sapiens chromosome 8, clone RP11-960H2, complete sequence Length = 161638 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1667 tcttttcaaattgtgaaatttg 1688 |||||||||||||||||||||| Sbjct: 134161 tcttttcaaattgtgaaatttg 134140
>emb|AL929325.7| Human DNA sequence from clone CTD-2194M22 on chromosome X, complete sequence Length = 176541 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1202 tgacagtaagatatcttatgtt 1223 |||||||||||||||||||||| Sbjct: 101198 tgacagtaagatatcttatgtt 101219
>gb|AC044814.6| Homo sapiens chromosome 8, clone RP11-688B7, complete sequence Length = 186369 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1667 tcttttcaaattgtgaaatttg 1688 |||||||||||||||||||||| Sbjct: 13303 tcttttcaaattgtgaaatttg 13324
>dbj|AP000773.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-97P20, complete sequences Length = 170434 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 949 aagatcatggaaggaaaaggct 970 |||||||||||||||||||||| Sbjct: 18315 aagatcatggaaggaaaaggct 18336
>emb|CT009511.9| M.truncatula DNA sequence from clone MTH2-69I7 on chromosome 3, complete sequence Length = 116999 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1491 agaatatatatataagatgaaa 1512 |||||||||||||||||||||| Sbjct: 30316 agaatatatatataagatgaaa 30337
>ref|XM_001010344.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_01005240) mRNA, complete cds Length = 3453 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 aagctatagctatagctatgg 30 ||||||||||||||||||||| Sbjct: 1579 aagctatagctatagctatgg 1559
>gb|BC115451.1| Mus musculus histone cluster 2, H4, mRNA (cDNA clone IMAGE:40099778), partial cds Length = 305 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 133 tctccggcctcatctacgagg 153
>emb|CT830670.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA102F13, full insert sequence Length = 1685 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 gacggcgtccgcctcttctac 233 ||||||||||||||||||||| Sbjct: 189 gacggcgtccgcctcttctac 209
>emb|CT832339.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA102H14, full insert sequence Length = 1684 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 gacggcgtccgcctcttctac 233 ||||||||||||||||||||| Sbjct: 189 gacggcgtccgcctcttctac 209
>emb|CT832263.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA102D12, full insert sequence Length = 1557 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 gacggcgtccgcctcttctac 233 ||||||||||||||||||||| Sbjct: 189 gacggcgtccgcctcttctac 209
>emb|CT943657.7| M.truncatula DNA sequence from clone MTH2-91G18 on chromosome 3, complete sequence Length = 39290 Score = 42.1 bits (21), Expect = 6.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1491 agaatatatatataagatgaaatatattg 1519 ||||||||||||||||||| || |||||| Sbjct: 30511 agaatatatatataagatgtaaaatattg 30539
>gb|BC125600.1| Mus musculus histone cluster 1, H4h, mRNA (cDNA clone MGC:159303 IMAGE:40130115), complete cds Length = 494 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 163 tctccggcctcatctacgagg 183
>gb|BC125598.1| Mus musculus histone cluster 1, H4h, mRNA (cDNA clone MGC:159301 IMAGE:40130113), complete cds Length = 497 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 163 tctccggcctcatctacgagg 183
>gb|BC120940.2| Homo sapiens histone cluster 1, H4h, mRNA (cDNA clone MGC:149418 IMAGE:40115074), complete cds Length = 356 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>gb|BC119612.1| Mus musculus histone cluster 1, H4h, mRNA (cDNA clone MGC:141437 IMAGE:40061668), complete cds Length = 312 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>gb|BC115448.2| Mus musculus histone cluster 2, H4, mRNA (cDNA clone MGC:144215 IMAGE:40099764), complete cds Length = 312 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>ref|NM_001062727.1| Oryza sativa (japonica cultivar-group) Os05g0542200 (Os05g0542200) mRNA, complete cds Length = 1859 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 gacggcgtccgcctcttctac 233 ||||||||||||||||||||| Sbjct: 364 gacggcgtccgcctcttctac 384
>ref|NM_001051517.1| Oryza sativa (japonica cultivar-group) Os01g0878800 (Os01g0878800) mRNA, complete cds Length = 1244 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ccctgctgctcgtcttccccc 87 ||||||||||||||||||||| Sbjct: 127 ccctgctgctcgtcttccccc 107
>ref|XM_518300.2| PREDICTED: Pan troglodytes similar to histone H4 (LOC462507), mRNA Length = 643 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 173 tctccggcctcatctacgagg 193
>ref|XM_001138202.1| PREDICTED: Pan troglodytes similar to histone H4 (LOC736707), mRNA Length = 397 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 173 tctccggcctcatctacgagg 193
>gb|DQ895845.1| Homo sapiens clone FLH188259.01L; RZPDo839A0663D HIST1H4F mRNA, partial sequence Length = 312 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>gb|DQ892605.1| Synthetic construct Homo sapiens clone FLH188263.01X; RZPDo839A0673D HIST1H4F mRNA, complete sequence Length = 312 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>gb|BC119241.1| Mus musculus histone cluster 2, H4, mRNA (cDNA clone MGC:155557 IMAGE:8733990), complete cds Length = 448 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 232 tctccggcctcatctacgagg 252
>gb|BC119243.1| Mus musculus histone cluster 2, H4, mRNA (cDNA clone MGC:155559 IMAGE:8733992), complete cds Length = 448 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 232 tctccggcctcatctacgagg 252
>gb|BC119611.1| Mus musculus histone 2, H4, mRNA (cDNA clone IMAGE:40061655), partial cds Length = 319 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 139 tctccggcctcatctacgagg 159
>gb|BC117010.1| Mus musculus histone cluster 2, H4, mRNA (cDNA clone MGC:151387 IMAGE:40126329), complete cds Length = 412 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 188 tctccggcctcatctacgagg 208
>gb|BC117012.1| Mus musculus histone cluster 2, H4, mRNA (cDNA clone MGC:151389 IMAGE:40126331), complete cds Length = 412 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 188 tctccggcctcatctacgagg 208
>gb|BC115450.1| Mus musculus histone cluster 2, H4, mRNA (cDNA clone MGC:144217 IMAGE:40099776), complete cds Length = 312 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>gb|BC111093.1| Homo sapiens histone cluster 1, H4i, mRNA (cDNA clone MGC:133359 IMAGE:40069039), complete cds Length = 354 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>gb|BC111434.1| Homo sapiens histone cluster 1, H4i, mRNA (cDNA clone MGC:133360 IMAGE:40069044), complete cds Length = 354 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>ref|XM_001061900.1| PREDICTED: Rattus norvegicus histone 1, H4m (predicted) (Hist1h4m_predicted), mRNA Length = 336 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 164 tctccggcctcatctacgagg 184
>ref|XM_001061844.1| PREDICTED: Rattus norvegicus similar to germinal histone H4 gene (LOC682518), mRNA Length = 400 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 147 tctccggcctcatctacgagg 167
>ref|XM_001071818.1| PREDICTED: Rattus norvegicus similar to germinal histone H4 gene (LOC684745), mRNA Length = 312 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>ref|XM_001071605.1| PREDICTED: Rattus norvegicus similar to germinal histone H4 gene (LOC684686), mRNA Length = 373 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 148 tctccggcctcatctacgagg 168
>ref|XM_001071272.1| PREDICTED: Rattus norvegicus similar to germinal histone H4 gene (LOC684621), mRNA Length = 545 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 226 tctccggcctcatctacgagg 246
>ref|XM_001057149.1| PREDICTED: Rattus norvegicus similar to germinal histone H4 gene (LOC680430), mRNA Length = 400 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 147 tctccggcctcatctacgagg 167
>ref|XM_225382.2| PREDICTED: Rattus norvegicus histone 1, H4m (predicted) (Hist1h4m_predicted), mRNA Length = 336 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 164 tctccggcctcatctacgagg 184
>ref|XM_001055174.1| PREDICTED: Rattus norvegicus similar to germinal histone H4 gene (LOC679983), mRNA Length = 545 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 226 tctccggcctcatctacgagg 246
>ref|XM_001054684.1| PREDICTED: Rattus norvegicus similar to germinal histone H4 gene (LOC679840), mRNA Length = 376 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 151 tctccggcctcatctacgagg 171
>emb|CT983686.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 548 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 311 cctctccggcctcatctacgaggtc 335 |||| |||||||||||||||||||| Sbjct: 180 cctcgccggcctcatctacgaggtc 204
>gb|DQ445629.1| Giardia intestinalis strain WP clone 1267 histone (H4) gene, partial cds Length = 167 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 49 tctccggcctcatctacgagg 69
>gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_G11, complete sequence Length = 115808 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 213 gacggcgtccgcctcttctac 233 ||||||||||||||||||||| Sbjct: 91231 gacggcgtccgcctcttctac 91211
>ref|NM_178208.1| Mus musculus histone cluster 1, H4c (Hist1h4c), mRNA Length = 312 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>ref|NM_178192.1| Mus musculus histone cluster 1, H4a (Hist1h4a), mRNA Length = 312 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>ref|NM_021968.3| Homo sapiens histone cluster 1, H4j (HIST1H4J), mRNA Length = 356 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>gb|BC062345.1| Homo sapiens cDNA clone IMAGE:6597408 Length = 392 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 159 tctccggcctcatctacgagg 179
>ref|XM_601250.2| PREDICTED: Bos taurus similar to germinal histone H4 gene (LOC522961), mRNA Length = 312 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>gb|BC052219.1| Mus musculus histone cluster 1, H4i, mRNA (cDNA clone MGC:60536 IMAGE:30017176), complete cds Length = 724 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 152 tctccggcctcatctacgagg 172
>gb|BC058529.1| Mus musculus histone 1, H4h, mRNA (cDNA clone IMAGE:6817839), partial cds Length = 457 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 148 tctccggcctcatctacgagg 168
>gb|BC028550.1| Mus musculus histone 1, H4h, mRNA (cDNA clone IMAGE:1398106), partial cds Length = 439 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 152 tctccggcctcatctacgagg 172
>ref|NM_003541.2| Homo sapiens histone cluster 1, H4k (HIST1H4K), mRNA Length = 354 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>gb|BC019757.1| Mus musculus histone 2, H4, mRNA (cDNA clone IMAGE:4205460), partial cds Length = 733 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 169 tctccggcctcatctacgagg 189
>gb|AC135242.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0070D14, complete sequence Length = 174780 Score = 42.1 bits (21), Expect = 6.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 730 gaattccatttcttcatgggatgggaattataccagatgaa 770 ||||||||||||| ||||| |||||| ||||| | |||||| Sbjct: 106018 gaattccatttctgcatggcatgggacttatatctgatgaa 106058
>gb|BC100619.1| Rattus norvegicus germinal histone H4 gene, mRNA (cDNA clone MGC:124607 IMAGE:7938313), complete cds Length = 1326 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 163 tctccggcctcatctacgagg 183
>gb|AC104317.2| Homo sapiens chromosome 8 clone RP11-383J24 map q24.13, complete sequence Length = 198700 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1493 aatatatatataagatgaaatatat 1517 |||||||||||||||| |||||||| Sbjct: 35449 aatatatatataagataaaatatat 35425
>gb|AC034285.6| Mus musculus chromosome 13, clone RP23-220G21, complete sequence Length = 209720 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 53637 tctccggcctcatctacgagg 53617 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 104124 tctccggcctcatctacgagg 104104
>gb|AC110716.6| Homo sapiens 3 BAC RP11-442N1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 67856 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1494 atatatatataagatgaaatatatt 1518 |||||||| |||||||||||||||| Sbjct: 312 atatatatttaagatgaaatatatt 288
>gb|AC146144.2| Pan troglodytes BAC clone RP43-37J17 from 7, complete sequence Length = 206029 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 cgccggccgccgctgtcgtcc 65 ||||||||||||||||||||| Sbjct: 121075 cgccggccgccgctgtcgtcc 121055
>gb|AY128664.1| Homo sapiens clone HIST1H4K histone H4 gene, complete cds Length = 930 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 450 tctccggcctcatctacgagg 470
>gb|AY128663.1| Homo sapiens clone HIST1H4J histone H4 gene, complete cds Length = 930 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 451 tctccggcctcatctacgagg 471
>gb|AC118022.12| Mus musculus chromosome 15, clone RP23-459I23, complete sequence Length = 190653 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 cccctcctgatcgcccatcct 104 ||||||||||||||||||||| Sbjct: 25682 cccctcctgatcgcccatcct 25702
>gb|BC057955.1| Mus musculus histone cluster 1, H4h, mRNA (cDNA clone IMAGE:5359141), with apparent retained intron Length = 1631 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 147 tctccggcctcatctacgagg 167
>dbj|AK133404.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933413O14 product:histone 1, H4b, full insert sequence Length = 1459 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 121 tctccggcctcatctacgagg 101
>dbj|AK139521.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020002O07 product:histone 1, H4j, full insert sequence Length = 594 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 175 tctccggcctcatctacgagg 195
>ref|NM_178193.1| Mus musculus histone cluster 1, H4b (Hist1h4b), mRNA Length = 312 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>dbj|AK010085.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310067E17 product:histone 4 protein, full insert sequence Length = 778 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 176 tctccggcctcatctacgagg 196
>gb|AC016933.20| Homo sapiens 3 BAC RP11-166D18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153763 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1494 atatatatataagatgaaatatatt 1518 |||||||| |||||||||||||||| Sbjct: 1693 atatatatttaagatgaaatatatt 1717
>dbj|AK016310.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930578O05 product:histone 4 protein, full insert sequence Length = 541 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 214 tctccggcctcatctacgagg 234
>dbj|AK016178.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930558J22 product:histone 4 protein, full insert sequence Length = 1100 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 143 tctccggcctcatctacgagg 123
>ref|NM_153173.1| Mus musculus histone cluster 1, H4h (Hist1h4h), mRNA dbj|AK007642.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810029H14 product:histone 4 protein, full insert sequence Length = 472 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 207 tctccggcctcatctacgagg 227
>dbj|AK011560.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610027B07 product:histone 4 protein, full insert sequence Length = 720 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 180 tctccggcctcatctacgagg 200
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 213 gacggcgtccgcctcttctac 233 ||||||||||||||||||||| Sbjct: 26710234 gacggcgtccgcctcttctac 26710214
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 ccctgctgctcgtcttccccc 87 ||||||||||||||||||||| Sbjct: 38135752 ccctgctgctcgtcttccccc 38135772
>gb|M27433.1|RATHIS4G Rattus norvegicus histone H4 gene, complete cds Length = 594 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 329 tctccggcctcatctacgagg 349
>gb|AC063938.13| Homo sapiens 3 BAC RP11-495I11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 94244 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1494 atatatatataagatgaaata 1514 ||||||||||||||||||||| Sbjct: 92154 atatatatataagatgaaata 92174
>emb|AL049822.30|HSJ160A22 Human DNA sequence from clone RP1-160A22 on chromosome 6p21.2-22.2 Contains histone genes H2AFE, H2BFE, H4FE and H4FD, ESTs, STSs, GSSs and three CpG islands, complete sequence Length = 24706 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 12611 tctccggcctcatctacgagg 12631 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 19735 tctccggcctcatctacgagg 19715
>ref|NM_175656.2| Mus musculus histone cluster 1, H4i (Hist1h4i), mRNA gb|BC092144.1| Mus musculus histone cluster 1, H4i, mRNA (cDNA clone MGC:106611 IMAGE:30612926), complete cds Length = 562 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 169 tctccggcctcatctacgagg 189
>gb|BC096767.1| Mus musculus histone 2, H4, mRNA (cDNA clone IMAGE:30094179) Length = 3447 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 155 tctccggcctcatctacgagg 175
>gb|BC017361.2| Homo sapiens cDNA clone MGC:29783 IMAGE:4647914, complete cds Length = 416 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 159 tctccggcctcatctacgagg 179
>emb|BX023335.1|CNS08Q63 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA35CG03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 497 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 202 tctccggcctcatctacgagg 222
>emb|Y12290.1|MMHIST431 M.musculus genes encoding histone H4, histone H3 and histone H1.1 Length = 5597 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 1201 tctccggcctcatctacgagg 1181
>emb|Y09604.1|HVCPMIII H.vulgare mRNA for serine carboxypeptidase III, CP-MIII Length = 1765 Score = 42.1 bits (21), Expect = 6.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 263 ggaggaccccgtcctgctctggctcaccggcgg 295 |||||||||||| || |||||||||||||||| Sbjct: 378 ggaggaccccgtggtgatctggctcaccggcgg 410
>emb|X60484.1|HSH4EHIS H.sapiens H4/e gene for H4 histone Length = 859 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 450 tctccggcctcatctacgagg 470
>emb|X60483.1|HSH4DHIS H.sapiens H4/d gene for H4 histone Length = 1528 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 751 tctccggcctcatctacgagg 771
>emb|X13235.1|MMHIS412 Mouse histone H4 gene (clone 12) Length = 637 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 373 tctccggcctcatctacgagg 393
>emb|V00753.1|MMHI01 Mouse gene encoding the mouse histone H4 Length = 968 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 397 tctccggcctcatctacgagg 417
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 tcatccagtcggagcgcgacc 258 ||||||||||||||||||||| Sbjct: 371568 tcatccagtcggagcgcgacc 371588
>emb|X03018.1|XLHISH3A Xenopus laevis histone gene cluster XlH3-A with genes H1A, H2B, H3 and H4 Length = 8592 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 7088 tctccggcctcatctacgagg 7108
>gb|BC087952.1| Mus musculus histone cluster 1, H4h, mRNA (cDNA clone MGC:107599 IMAGE:6787571), complete cds Length = 472 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 200 tctccggcctcatctacgagg 220
>gb|U62672.1|MMU62672 Mus musculus histone H3.1-D (H3-D) and histone H4-D (H4-D) genes, complete cds Length = 2321 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 1687 tctccggcctcatctacgagg 1707
>emb|AL592149.8| Mouse DNA sequence from clone RP23-283N14 on chromosome 13 Contains a novel gene, the genes for three H1, four H2a, five H2b, four H3 and four H4 histone family members, the 3' end of a variant of the Hfe gene for hemochromatosis protein (Mr2) and ten CpG islands, complete sequence Length = 184730 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 11856 tctccggcctcatctacgagg 11876 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 62156 tctccggcctcatctacgagg 62176 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 178725 tctccggcctcatctacgagg 178705
>emb|AL589879.21| Mouse DNA sequence from clone RP23-38E20 on chromosome 13 Contains the genes for H2b histone family member A, two H2a, two H4 and an H2b histone family member, a serine/threonine protein kinase pseudogene, a novel pseudogene, a novel gene (4930500C15Rik), the gene for a novel KRAB box and C2H2 Zinc Finger containing protein, a ribosomal protein L21 (RPL21) pseudogene, a TU mitochondrial translation elongation factor (tufa) pseudogene, the 5' end of the gene for a novel protein similar to nuclear envelope pore membrane protein POM121 and four CpG islands, complete sequence Length = 182817 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 12090 tctccggcctcatctacgagg 12110 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 32186 tctccggcctcatctacgagg 32166
>emb|AL590614.8| Mouse DNA sequence from clone RP23-9O16 on chromosome 13 Contains the 3' end of the gene for a novel protein similar to nuclear envelope pore membrane protein POM121, the Prss16 gene for thymus serine protease16, three novel genes, the genes for two H2a, two H2b and one H4 histone family members, a ribosomal protein L37A (Rpl37a) pseudogene, a novel pseudogene, three genes for novel vomeronasal 1 receptor H (V1rh) family members, the gene for a novel vomeronasal 1 receptor I (V1ri) family member, six V1ri pseudogenes, a V1rh pseudogene and six CpG islands, complete sequence Length = 210845 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 58540 tctccggcctcatctacgagg 58520
>emb|AL589651.8| Mouse DNA sequence from clone RP23-138F20 on chromosome 13 Contains five genes for olfactory receptors, a novel gene, the H1f5 gene for H1 histone family member 5, three genes and one pseudogene for H2a histone family members, four genes for H2b, two genes for H4, and two genes for H3 histone family members and seven CpG islands, complete sequence Length = 222823 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 156225 tctccggcctcatctacgagg 156245 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 171356 tctccggcctcatctacgagg 171336
>emb|AL590388.4| Mouse DNA sequence from clone RP23-480B19 on chromosome 13 Contains the Slc17a1 gene for solute carrier family 17 (vesicular glutamate transporter) member 1, two genes for novel solute carrier family 17 (Slc17) members, two novel genes, the gene for a novel C3HC4 type zinc finger (ring finger) protein, the gene for an H2a, an H2b, two genes for H3 and two genes for H4 histone family members, a H2a histone family pseudogene, the H1f1 and H1f2 genes for H1 histone family members 1 and 2, the H3f2 gene for H3 histone family, member 2 (H3.2), a novel pseudogene, the Hfe gene for hemochromatosis protein (Mr2) and two CpG islands, complete sequence Length = 186062 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 127360 tctccggcctcatctacgagg 127380 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 131218 tctccggcctcatctacgagg 131198
>emb|AJ249813.1|MAL249813 Mortierella alpina histone H3.2 and H4.2 genes for histone H3 and for histone H4 Length = 1860 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 1428 tctccggcctcatctacgagg 1448
>emb|AJ249812.1|MAL249812 Mortierella alpina H3.1 and H4.1 genes for histone H3 and histone H4 Length = 1630 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 1229 tctccggcctcatctacgagg 1249
>emb|BX571852.20| Zebrafish DNA sequence from clone DKEY-175N6 in linkage group 10, complete sequence Length = 178333 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1494 atatatatataagatgaaatatatt 1518 |||||||||||| |||||||||||| Sbjct: 96648 atatatatataatatgaaatatatt 96672 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1494 atatatatataagatgaaatatatt 1518 |||||||||||| |||||||||||| Sbjct: 96941 atatatatataatatgaaatatatt 96917
>dbj|AP003261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0471B04 Length = 138025 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 ccctgctgctcgtcttccccc 87 ||||||||||||||||||||| Sbjct: 103786 ccctgctgctcgtcttccccc 103806
>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0018C10 Length = 200183 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 ccctgctgctcgtcttccccc 87 ||||||||||||||||||||| Sbjct: 54986 ccctgctgctcgtcttccccc 55006
>gb|AC007218.6| Homo sapiens chromosome 16 clone RP11-297M9, complete sequence Length = 193220 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1489 agagaatatatatataagatg 1509 ||||||||||||||||||||| Sbjct: 153971 agagaatatatatataagatg 153951
>gb|AC010740.7| Homo sapiens BAC clone RP11-493I5 from 2, complete sequence Length = 184455 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1494 atatatatataagatgaaatatatt 1518 |||||||||||| |||||||||||| Sbjct: 18217 atatatatataaaatgaaatatatt 18241
>gb|AC107426.13| Homo sapiens 3 BAC RP11-573F3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114540 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1493 aatatatatataagatgaaatatat 1517 ||||||||||||| ||||||||||| Sbjct: 94177 aatatatatataaaatgaaatatat 94153
>ref|NM_175654.1| Mus musculus histone cluster 1, H4d (Hist1h4d), mRNA Length = 312 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>ref|NM_178210.1| Mus musculus histone cluster 1, H4j (Hist1h4j), mRNA Length = 312 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>ref|NM_175657.1| Mus musculus histone cluster 1, H4m (Hist1h4m), mRNA Length = 312 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>ref|NM_033596.1| Mus musculus histone cluster 2, H4 (Hist2h4), mRNA Length = 400 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 169 tctccggcctcatctacgagg 189
>gb|AC114290.2| Homo sapiens chromosome 5 clone CTD-3062C19, complete sequence Length = 76144 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1494 atatatatataagatgaaatatatt 1518 |||||||||||| |||||||||||| Sbjct: 60943 atatatatataaaatgaaatatatt 60919
>gb|AY158966.1| Mus musculus histone protein Hist2h4 gene, complete cds Length = 1309 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 640 tctccggcctcatctacgagg 660
>gb|AY158965.1| Mus musculus histone protein Hist1h4a gene, complete cds Length = 1246 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 577 tctccggcctcatctacgagg 597
>gb|AY158964.1| Mus musculus histone protein Hist1h4b gene, complete cds Length = 1186 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 670 tctccggcctcatctacgagg 650
>gb|AY158963.1| Mus musculus histone protein Hist1h4c gene, complete cds Length = 1309 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 640 tctccggcctcatctacgagg 660
>gb|AY158962.1| Mus musculus histone protein Hist1h4d gene, complete cds Length = 1309 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 640 tctccggcctcatctacgagg 660
>gb|AY158960.1| Mus musculus histone protein Hist1h4h gene, complete cds Length = 1470 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 705 tctccggcctcatctacgagg 725
>gb|AY158959.1| Mus musculus histone protein Hist1h4i gene, complete cds Length = 1309 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 640 tctccggcctcatctacgagg 660
>gb|AY158958.1| Mus musculus histone protein Hist1h4m gene, complete cds Length = 1309 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 640 tctccggcctcatctacgagg 660
>gb|AY158957.1| Mus musculus histone protein Hist1h4k gene, complete cds Length = 1309 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 640 tctccggcctcatctacgagg 660
>gb|AY158956.1| Mus musculus histone protein Hist1h4j gene, complete cds Length = 1776 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 674 tctccggcctcatctacgagg 694
>gb|AC090192.19| Homo sapiens chromosome 8, clone RP11-383J24, complete sequence Length = 198899 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1493 aatatatatataagatgaaatatat 1517 |||||||||||||||| |||||||| Sbjct: 35450 aatatatatataagataaaatatat 35426
>dbj|AK105779.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-G02, full insert sequence Length = 1190 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ccctgctgctcgtcttccccc 87 ||||||||||||||||||||| Sbjct: 83 ccctgctgctcgtcttccccc 63
>dbj|AK104297.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-H10, full insert sequence Length = 1030 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ccctgctgctcgtcttccccc 87 ||||||||||||||||||||| Sbjct: 88 ccctgctgctcgtcttccccc 68
>dbj|AK071703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112L03, full insert sequence Length = 1561 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 gacggcgtccgcctcttctac 233 ||||||||||||||||||||| Sbjct: 192 gacggcgtccgcctcttctac 212
>dbj|AK071306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088C20, full insert sequence Length = 1860 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 gacggcgtccgcctcttctac 233 ||||||||||||||||||||| Sbjct: 365 gacggcgtccgcctcttctac 385
>dbj|AK070438.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023053F07, full insert sequence Length = 1203 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ccctgctgctcgtcttccccc 87 ||||||||||||||||||||| Sbjct: 90 ccctgctgctcgtcttccccc 70
>dbj|AK070251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041E09, full insert sequence Length = 1250 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ccctgctgctcgtcttccccc 87 ||||||||||||||||||||| Sbjct: 133 ccctgctgctcgtcttccccc 113
>ref|XM_560872.1| Anopheles gambiae str. PEST ENSANGP00000028939 (ENSANGG00000023178), partial mRNA Length = 312 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>emb|X00091.1|HSHISH4 Human histone H4 gene Length = 709 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 259 tctccggcctcatctacgagg 279
>emb|AL954182.18| Zebrafish DNA sequence from clone CH211-205N18 in linkage group 20, complete sequence Length = 151552 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1486 ataagagaatatatatataagatga 1510 |||||| |||||||||||||||||| Sbjct: 34936 ataagataatatatatataagatga 34960
>ref|XM_318361.1| Anopheles gambiae str. PEST ENSANGP00000016008 (ENSANGG00000013519), partial mRNA Length = 312 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>gb|AC006531.1|AC006531 Homo sapiens chromosome 16 clone 113K5, complete sequence Length = 167525 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1489 agagaatatatatataagatg 1509 ||||||||||||||||||||| Sbjct: 32936 agagaatatatatataagatg 32916
>emb|AL929031.3| Zebrafish DNA sequence from clone CH211-255L18 in linkage group 17, complete sequence Length = 187548 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1494 atatatatataagatgaaata 1514 ||||||||||||||||||||| Sbjct: 64504 atatatatataagatgaaata 64524
>ref|XM_307607.1| Anopheles gambiae str. PEST ENSANGP00000016178 (ENSANGG00000013689), partial mRNA Length = 312 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>ref|XM_305995.1| Anopheles gambiae str. PEST ENSANGP00000012785 (ENSANGG00000010296), partial mRNA Length = 312 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>ref|NM_022686.2| Rattus norvegicus germinal histone H4 gene (Hist1h4b), mRNA gb|AY936209.1| Rattus norvegicus histone H4 variant H4-v.1 mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 159 tctccggcctcatctacgagg 179
>gb|AC093350.15| Mus musculus chromosome 3, clone RP23-16G3, complete sequence Length = 200326 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 87804 tctccggcctcatctacgagg 87784
>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome Length = 1751377 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1304 gggatacacaaggactttctc 1324 ||||||||||||||||||||| Sbjct: 1382249 gggatacacaaggactttctc 1382269
>gb|AY675279.1| Suricata suricatta histone H4 gene, partial cds Length = 130 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 48 tctccggcctcatctacgagg 68
>gb|AY675272.1| Mus musculus histone H4 gene, partial cds Length = 130 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 48 tctccggcctcatctacgagg 68
>gb|AY675267.1| Xenopus laevis histone H4 gene, partial cds Length = 130 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 48 tctccggcctcatctacgagg 68
>gb|AY675265.1| Canis familiaris histone H4 gene, partial cds Length = 130 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 48 tctccggcctcatctacgagg 68
>emb|Z15135.1|PCHISH42 P.chrysosporium gene for histone H4.2 Length = 1217 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 653 tctccggcctcatctacgagg 673
>gb|AF008301.1|AF008301 Ambystoma mexicanum histone H4 (H4) mRNA, partial cds Length = 112 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 42 tctccggcctcatctacgagg 62
>gb|AC137708.16| Mus musculus chromosome 3, clone RP24-277H8, complete sequence Length = 154779 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1498 atatataagatgaaatatatt 1518 ||||||||||||||||||||| Sbjct: 109310 atatataagatgaaatatatt 109330
>gb|BC051566.1| Mus musculus histone cluster 2, H4, mRNA (cDNA clone IMAGE:1446370) Length = 358 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 161 tctccggcctcatctacgagg 181
>ref|NM_178211.1| Mus musculus histone cluster 1, H4k (Hist1h4k), mRNA Length = 312 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 140 tctccggcctcatctacgagg 160
>gb|AF086564.1|HUMZE16D01 Homo sapiens full length insert cDNA clone ZE16D01 Length = 382 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 157 tctccggcctcatctacgagg 177
>gb|AC125099.3| Mus musculus BAC clone RP24-201C14 from 3, complete sequence Length = 166720 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 12889 tctccggcctcatctacgagg 12909
>emb|X13236.1|MMHIS453 Mouse histone H4 gene Length = 1678 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 799 tctccggcctcatctacgagg 819
>emb|AL671925.4| Mouse DNA sequence from clone RP23-236O21 on chromosome 4, complete sequence Length = 218429 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1494 atatatatataagatgaaata 1514 ||||||||||||||||||||| Sbjct: 41163 atatatatataagatgaaata 41143
>gb|M21287.1|XELHX1H3 X.laevis histone H1B, H2A, H2B, and H4 genes, complete cds, and histone H3 gene, 3' end, gene cluster X1h3 Length = 8608 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 7104 tctccggcctcatctacgagg 7124
>gb|J00986.1|XELHIS4L xenopus laevis h4 histone mrna Length = 372 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 133 tctccggcctcatctacgagg 153
>gb|J00954.1|NVIHIS4P Newt histone H4 gene, partial Length = 168 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 98 tctccggcctcatctacgagg 118
>gb|M28409.1|RATH1TH4T Rat testis-specific histone H1t and histone H4t, complete cds Length = 6861 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 4907 tctccggcctcatctacgagg 4887
>gb|M12277.1|WHTH4091 Wheat histone H4 TH091 gene, complete cds Length = 727 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 313 tctccggcctcatctacgagg 333 ||||||||||||||||||||| Sbjct: 392 tctccggcctcatctacgagg 412 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 295,347,501 Number of extensions: 24135726 Number of successful extensions: 329841 Number of sequences better than 10.0: 205 Number of HSP's gapped: 329834 Number of HSP's successfully gapped: 259 Length of query: 1714 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1691 Effective length of database: 18,503,978,556 Effective search space: 31290227738196 Effective search space used: 31290227738196 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
