ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf179b24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P26372:KRUC_SHEEP Keratin, ultra high-sulfur matrix protein - Ov... 35 1.3
2Q86YZ3:HORN_HUMAN Hornerin - Homo sapiens (Human) 34 1.7
3Q8VHD8:HORN_MOUSE Hornerin - Mus musculus (Mouse) 33 2.9
4Q41350:OLP1_SOLLC Osmotin-like protein precursor - Solanum lycop... 32 8.3

>P26372:KRUC_SHEEP Keratin, ultra high-sulfur matrix protein - Ovis aries (Sheep)|
          Length = 182
 Score = 34.7 bits (78), Expect = 1.3
 Identities = 28/90 (31%), Positives = 33/90 (36%), Gaps = 4/90 (4%)
 Frame = +3

Query: 714 G*IGSPASGHAEGCSWSLSTRQPARRHDGGGDGAVQGCAQSL--PERCS--ACRCHGSGN 881
           G  GS   G   GC     ++        GG G+  GC  S   P  C   AC C   G 
Sbjct: 53  GGCGSSCGGSKGGCGSCGGSK--------GGCGSCGGCGSSCCKPVCCCVPACSCSSCGK 104

Query: 882 GGVQGCTRSVSECCSGCEHGRNSHGTVQGC 971
           GG   C  S   C S C   +   G+  GC
Sbjct: 105 GGCGSCGGSKGGCGS-CGGSKGGCGSCGGC 133



 Score = 33.5 bits (75), Expect = 2.9
 Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 8/49 (16%)
 Frame = +3

Query: 801 GGDGAVQGCAQSLPERCS--------ACRCHGSGNGGVQGCTRSVSECC 923
           GG G+  GC       C         AC C   G GG   C  S S CC
Sbjct: 125 GGCGSCGGCGSGCGSSCCVPVCCCVPACSCSSCGKGGCGSCGCSQSSCC 173



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>Q86YZ3:HORN_HUMAN Hornerin - Homo sapiens (Human)|
          Length = 2850

 Score = 34.3 bits (77), Expect = 1.7
 Identities = 25/84 (29%), Positives = 34/84 (40%)
 Frame = +3

Query: 741  HAEGCSWSLSTRQPARRHDGGGDGAVQGCAQSLPERCSACRCHGSGNGGVQGCTRSVSEC 920
            H  G  WS S+    R   G G  +  G  +S   + S C  HGSG+G      +  S  
Sbjct: 1378 HGSGSGWSSSS---GRHGSGSGQSSGFGHHESSSWQSSGCTQHGSGSGHSSSYEQHGSR- 1433

Query: 921  CSGCEHGRNSHGTVQGCT*SVSKH 992
             SG       HG+  G + S  +H
Sbjct: 1434 -SGQSSRGERHGSSSGSSSSYGQH 1456



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>Q8VHD8:HORN_MOUSE Hornerin - Mus musculus (Mouse)|
          Length = 2496

 Score = 33.5 bits (75), Expect = 2.9
 Identities = 24/79 (30%), Positives = 34/79 (43%)
 Frame = +3

Query: 732 ASGHAEGCSWSLSTRQPARRHDGGGDGAVQGCAQSLPERCSACRCHGSGNGGVQGCTRSV 911
           +SG   GC    STR    +  G  + + Q   +S     S  +  GSG+GG  G ++  
Sbjct: 751 SSGQTSGCGSGQSTRY-GEQGSGSRNSSTQSRGRSTSRESSTSQRFGSGSGGSSGFSQGR 809

Query: 912 SECCSGCEHGRNSHGTVQG 968
           S        GR+S G  QG
Sbjct: 810 S------GQGRSSRGGQQG 822



 Score = 33.5 bits (75), Expect = 2.9
 Identities = 24/79 (30%), Positives = 34/79 (43%)
 Frame = +3

Query: 732  ASGHAEGCSWSLSTRQPARRHDGGGDGAVQGCAQSLPERCSACRCHGSGNGGVQGCTRSV 911
            +SG   GC    STR    +  G  + + Q   +S     S  +  GSG+GG  G ++  
Sbjct: 1100 SSGQTSGCGSGQSTRY-GEQGSGSRNSSTQSRGRSTSRESSTSQRFGSGSGGSSGFSQGR 1158

Query: 912  SECCSGCEHGRNSHGTVQG 968
            S        GR+S G  QG
Sbjct: 1159 S------GQGRSSRGGQQG 1171



 Score = 33.5 bits (75), Expect = 2.9
 Identities = 24/79 (30%), Positives = 34/79 (43%)
 Frame = +3

Query: 732  ASGHAEGCSWSLSTRQPARRHDGGGDGAVQGCAQSLPERCSACRCHGSGNGGVQGCTRSV 911
            +SG   GC    STR    +  G  + + Q   +S     S  +  GSG+GG  G ++  
Sbjct: 1448 SSGQTSGCGSGQSTRY-GEQGSGSRNSSTQSRGRSTSRESSTSQRFGSGSGGSSGFSQGR 1506

Query: 912  SECCSGCEHGRNSHGTVQG 968
            S        GR+S G  QG
Sbjct: 1507 S------GQGRSSRGGQQG 1519



 Score = 33.5 bits (75), Expect = 2.9
 Identities = 24/79 (30%), Positives = 34/79 (43%)
 Frame = +3

Query: 732  ASGHAEGCSWSLSTRQPARRHDGGGDGAVQGCAQSLPERCSACRCHGSGNGGVQGCTRSV 911
            +SG   GC    STR    +  G  + + Q   +S     S  +  GSG+GG  G ++  
Sbjct: 1796 SSGQTSGCGSDQSTRY-GEQGSGSRNSSTQSRGRSTSRESSTSQRFGSGSGGSSGFSQGR 1854

Query: 912  SECCSGCEHGRNSHGTVQG 968
            S        GR+S G  QG
Sbjct: 1855 S------GQGRSSRGGQQG 1867



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>Q41350:OLP1_SOLLC Osmotin-like protein precursor - Solanum lycopersicum (Tomato)|
           (Lycopersicon esculentum)
          Length = 252

 Score = 32.0 bits (71), Expect = 8.3
 Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
 Frame = +3

Query: 792 HDGGGDGAVQGCAQSLPERCSAC---RCHGSGNGGVQGCT------RSVSECCSGCEHGR 944
           H+G G   V GC  +L E C A    R HG G+G V GC       +S   CC      R
Sbjct: 149 HEGKGVCPVVGCRANLLESCPAVLQFRSHG-GHGPVVGCKSACEAFKSDEFCC------R 201

Query: 945 NSHGTVQGC 971
           N + + Q C
Sbjct: 202 NHYNSPQTC 210


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 256,161,293
Number of extensions: 5296291
Number of successful extensions: 14171
Number of sequences better than 10.0: 4
Number of HSP's gapped: 14123
Number of HSP's successfully gapped: 8
Length of query: 580
Length of database: 100,686,439
Length adjustment: 119
Effective length of query: 461
Effective length of database: 68,045,334
Effective search space: 31368898974
Effective search space used: 31368898974
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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