ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf179b24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001067006.1| Oryza sativa (japonica cultivar-group) Os07g0647600 (Os07g0647600) mRNA, complete cds Length = 1298 Score = 105 bits (53), Expect = 5e-19 Identities = 131/157 (83%) Strand = Plus / Plus Query: 1099 gctgaaatgcaaaagcttgggtttacaggaagcgaagtggtcaacgccgcgagtgttttc 1158 |||||||| ||||||||||| |||| |||||||| |||||| ||| || ||| ||||| Sbjct: 885 gctgaaattcaaaagcttggccttactggaagcgaggtggtcttcgcagcaagtattttc 944 Query: 1159 gccaaggaaccggaccaaatgggcatgttcttggcactcccagaaatctacaggagggag 1218 || |||||||| ||||||||| ||||| || ||||||||||||||||| | |||||| Sbjct: 945 gcaaaggaaccaaaccaaatggagatgtttttagcactcccagaaatctataagagggac 1004 Query: 1219 tacatactcaagatgcttaatggcgggcaatctctcc 1255 |||||| || | ||||| || || ||||||||||||| Sbjct: 1005 tacatagtccaaatgctcaacggtgggcaatctctcc 1041 Score = 85.7 bits (43), Expect = 5e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 808 atggagctgttcaaggatgtgcacagtcacttccagagcgttgttcagcatgccggtgcc 867 |||||| |||||||||||||||||| ||||||||| | ||||||||||||||| ||| Sbjct: 591 atggagttgttcaaggatgtgcacaatcacttccaaaatgttgttcagcatgccaatgcg 650 Query: 868 atggcagcggcaatggaggcgttcaaggatgcaca 902 ||||| ||||||||||| ||||| ||||||||| Sbjct: 651 atggccacggcaatggagatgttcagggatgcaca 685
>dbj|AK107302.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-C10, full insert sequence Length = 1300 Score = 105 bits (53), Expect = 5e-19 Identities = 131/157 (83%) Strand = Plus / Plus Query: 1099 gctgaaatgcaaaagcttgggtttacaggaagcgaagtggtcaacgccgcgagtgttttc 1158 |||||||| ||||||||||| |||| |||||||| |||||| ||| || ||| ||||| Sbjct: 887 gctgaaattcaaaagcttggccttactggaagcgaggtggtcttcgcagcaagtattttc 946 Query: 1159 gccaaggaaccggaccaaatgggcatgttcttggcactcccagaaatctacaggagggag 1218 || |||||||| ||||||||| ||||| || ||||||||||||||||| | |||||| Sbjct: 947 gcaaaggaaccaaaccaaatggagatgtttttagcactcccagaaatctataagagggac 1006 Query: 1219 tacatactcaagatgcttaatggcgggcaatctctcc 1255 |||||| || | ||||| || || ||||||||||||| Sbjct: 1007 tacatagtccaaatgctcaacggtgggcaatctctcc 1043 Score = 85.7 bits (43), Expect = 5e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 808 atggagctgttcaaggatgtgcacagtcacttccagagcgttgttcagcatgccggtgcc 867 |||||| |||||||||||||||||| ||||||||| | ||||||||||||||| ||| Sbjct: 593 atggagttgttcaaggatgtgcacaatcacttccaaaatgttgttcagcatgccaatgcg 652 Query: 868 atggcagcggcaatggaggcgttcaaggatgcaca 902 ||||| ||||||||||| ||||| ||||||||| Sbjct: 653 atggccacggcaatggagatgttcagggatgcaca 687
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 91.7 bits (46), Expect = 8e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 1099 gctgaaatgcaaaagcttgggtttacaggaagcgaagtggtcaacgccgcgagtgttttc 1158 |||||||| ||||||||||| |||| |||||||| |||||| ||| || ||| ||||| Sbjct: 26990874 gctgaaattcaaaagcttggccttactggaagcgaggtggtcttcgcagcaagtattttc 26990815 Query: 1159 gccaaggaaccggaccaaatgggcatgttcttggcactcccagaaatctacaggagggag 1218 || |||||||| ||||||||| ||||| || ||||||||||||||||| | |||||| Sbjct: 26990814 gcaaaggaaccaaaccaaatggagatgtttttagcactcccagaaatctataagagggac 26990755 Query: 1219 tacata 1224 |||||| Sbjct: 26990754 tacata 26990749 Score = 85.7 bits (43), Expect = 5e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 808 atggagctgttcaaggatgtgcacagtcacttccagagcgttgttcagcatgccggtgcc 867 |||||| |||||||||||||||||| ||||||||| | ||||||||||||||| ||| Sbjct: 26991168 atggagttgttcaaggatgtgcacaatcacttccaaaatgttgttcagcatgccaatgcg 26991109 Query: 868 atggcagcggcaatggaggcgttcaaggatgcaca 902 ||||| ||||||||||| ||||| ||||||||| Sbjct: 26991108 atggccacggcaatggagatgttcagggatgcaca 26991074
>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1316_A04 Length = 87144 Score = 91.7 bits (46), Expect = 8e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 1099 gctgaaatgcaaaagcttgggtttacaggaagcgaagtggtcaacgccgcgagtgttttc 1158 |||||||| ||||||||||| |||| |||||||| |||||| ||| || ||| ||||| Sbjct: 55352 gctgaaattcaaaagcttggccttactggaagcgaggtggtcttcgcagcaagtattttc 55293 Query: 1159 gccaaggaaccggaccaaatgggcatgttcttggcactcccagaaatctacaggagggag 1218 || |||||||| ||||||||| ||||| || ||||||||||||||||| | |||||| Sbjct: 55292 gcaaaggaaccaaaccaaatggagatgtttttagcactcccagaaatctataagagggac 55233 Query: 1219 tacata 1224 |||||| Sbjct: 55232 tacata 55227 Score = 85.7 bits (43), Expect = 5e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 808 atggagctgttcaaggatgtgcacagtcacttccagagcgttgttcagcatgccggtgcc 867 |||||| |||||||||||||||||| ||||||||| | ||||||||||||||| ||| Sbjct: 55646 atggagttgttcaaggatgtgcacaatcacttccaaaatgttgttcagcatgccaatgcg 55587 Query: 868 atggcagcggcaatggaggcgttcaaggatgcaca 902 ||||| ||||||||||| ||||| ||||||||| Sbjct: 55586 atggccacggcaatggagatgttcagggatgcaca 55552
>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0503D09 Length = 144443 Score = 91.7 bits (46), Expect = 8e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 1099 gctgaaatgcaaaagcttgggtttacaggaagcgaagtggtcaacgccgcgagtgttttc 1158 |||||||| ||||||||||| |||| |||||||| |||||| ||| || ||| ||||| Sbjct: 139465 gctgaaattcaaaagcttggccttactggaagcgaggtggtcttcgcagcaagtattttc 139406 Query: 1159 gccaaggaaccggaccaaatgggcatgttcttggcactcccagaaatctacaggagggag 1218 || |||||||| ||||||||| ||||| || ||||||||||||||||| | |||||| Sbjct: 139405 gcaaaggaaccaaaccaaatggagatgtttttagcactcccagaaatctataagagggac 139346 Query: 1219 tacata 1224 |||||| Sbjct: 139345 tacata 139340 Score = 85.7 bits (43), Expect = 5e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 808 atggagctgttcaaggatgtgcacagtcacttccagagcgttgttcagcatgccggtgcc 867 |||||| |||||||||||||||||| ||||||||| | ||||||||||||||| ||| Sbjct: 139759 atggagttgttcaaggatgtgcacaatcacttccaaaatgttgttcagcatgccaatgcg 139700 Query: 868 atggcagcggcaatggaggcgttcaaggatgcaca 902 ||||| ||||||||||| ||||| ||||||||| Sbjct: 139699 atggccacggcaatggagatgttcagggatgcaca 139665
>emb|CT030705.12| Mouse DNA sequence from clone RP23-118N11 on chromosome 13, complete sequence Length = 125516 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Minus Query: 9 tcccaatcccaatcccatctccatctccatctcc 42 |||| ||||| ||||||||||||||||||||||| Sbjct: 103290 tccccatccccatcccatctccatctccatctcc 103257
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 50.1 bits (25), Expect = 0.027 Identities = 28/29 (96%) Strand = Plus / Plus Query: 23 ccatctccatctccatctcccccggcagc 51 |||||||||||||||||||| |||||||| Sbjct: 21364739 ccatctccatctccatctccgccggcagc 21364767
>gb|AC010049.7| Drosophila melanogaster 3L BAC RPCI98-3O18 (Roswell Park Cancer Institute Drosophila BAC library) complete sequence Length = 168058 Score = 50.1 bits (25), Expect = 0.027 Identities = 28/29 (96%) Strand = Plus / Plus Query: 23 ccatctccatctccatctcccccggcagc 51 |||||||||||||||||||| |||||||| Sbjct: 9390 ccatctccatctccatctccgccggcagc 9418
>gb|AC099553.1| Drosophila melanogaster 3L BAC RP98-25G5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177608 Score = 50.1 bits (25), Expect = 0.027 Identities = 28/29 (96%) Strand = Plus / Plus Query: 23 ccatctccatctccatctcccccggcagc 51 |||||||||||||||||||| |||||||| Sbjct: 78296 ccatctccatctccatctccgccggcagc 78324
>emb|AL050342.42|HSDJ655K7 Human DNA sequence from clone RP4-655K7 on chromosome 1p35.3-36.13 Contains part of a gene encoding a novel protein,, complete sequence Length = 116857 Score = 48.1 bits (24), Expect = 0.11 Identities = 30/32 (93%) Strand = Plus / Minus Query: 10 cccaatcccaatcccatctccatctccatctc 41 ||||| |||| ||||||||||||||||||||| Sbjct: 112321 cccaaccccactcccatctccatctccatctc 112290
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 46.1 bits (23), Expect = 0.43 Identities = 26/27 (96%) Strand = Plus / Minus Query: 16 cccaatcccatctccatctccatctcc 42 |||| |||||||||||||||||||||| Sbjct: 10192336 cccattcccatctccatctccatctcc 10192310 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 15107412 cccatctccatctccatctcc 15107392
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 9 tcccaatcccaatcccatctcca 31 ||||||||||||||||||||||| Sbjct: 5834824 tcccaatcccaatcccatctcca 5834802 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 tcccatctccatctccatctcc 42 |||||||||||||||||||||| Sbjct: 18835199 tcccatctccatctccatctcc 18835178
>ref|NM_125839.3| Arabidopsis thaliana unknown protein (AT5G64430) mRNA, complete cds Length = 1885 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 atcccatctccatctccatctcc 42 ||||||||||||||||||||||| Sbjct: 1103 atcccatctccatctccatctcc 1125
>gb|BT008878.1| Arabidopsis thaliana At5g64430 mRNA, complete cds Length = 1542 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 atcccatctccatctccatctcc 42 ||||||||||||||||||||||| Sbjct: 1030 atcccatctccatctccatctcc 1052
>dbj|AK221499.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL07-53-G23 Length = 2020 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 20 atcccatctccatctccatctcc 42 ||||||||||||||||||||||| Sbjct: 557 atcccatctccatctccatctcc 535
>gb|AY092962.1| Arabidopsis thaliana unknown protein (At5g64430) mRNA, complete cds Length = 1757 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 atcccatctccatctccatctcc 42 ||||||||||||||||||||||| Sbjct: 1103 atcccatctccatctccatctcc 1125
>gb|AY093313.1| Arabidopsis thaliana unknown protein (At5g64430) mRNA, complete cds Length = 1572 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 atcccatctccatctccatctcc 42 ||||||||||||||||||||||| Sbjct: 1030 atcccatctccatctccatctcc 1052
>gb|AY062534.1| Arabidopsis thaliana Unknown protein (At5g64430; T12B11.2) mRNA, complete cds Length = 1716 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 atcccatctccatctccatctcc 42 ||||||||||||||||||||||| Sbjct: 1103 atcccatctccatctccatctcc 1125
>gb|AC007414.6| Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone BACR06J01, complete sequence Length = 172904 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 9 tcccaatcccaatcccatctcca 31 ||||||||||||||||||||||| Sbjct: 2162 tcccaatcccaatcccatctcca 2140
>gb|AC092233.1|AC092233 Drosophila melanogaster, chromosome 2L, region 30F-31B, BAC clone BACR29P12, complete sequence Length = 161446 Score = 46.1 bits (23), Expect = 0.43 Identities = 26/27 (96%) Strand = Plus / Plus Query: 16 cccaatcccatctccatctccatctcc 42 |||| |||||||||||||||||||||| Sbjct: 29752 cccattcccatctccatctccatctcc 29778
>gb|AC009849.7|AC009849 Drosophila melanogaster, chromosome 2L, region 31B-31C, BAC clone BACR07H08, complete sequence Length = 153505 Score = 46.1 bits (23), Expect = 0.43 Identities = 26/27 (96%) Strand = Plus / Minus Query: 16 cccaatcccatctccatctccatctcc 42 |||| |||||||||||||||||||||| Sbjct: 20233 cccattcccatctccatctccatctcc 20207
>gb|AC007330.6|AC007330 Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone BACR30G11, complete sequence Length = 166854 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 9 tcccaatcccaatcccatctcca 31 ||||||||||||||||||||||| Sbjct: 158527 tcccaatcccaatcccatctcca 158505
>gb|AC007413.5|AC007413 Drosophila melanogaster, chromosome 2R, region 46C-46D, BAC clone BACR01L01, complete sequence Length = 160301 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 9 tcccaatcccaatcccatctcca 31 ||||||||||||||||||||||| Sbjct: 113609 tcccaatcccaatcccatctcca 113587
>dbj|AB025640.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:T12B11 Length = 22022 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 20 atcccatctccatctccatctcc 42 ||||||||||||||||||||||| Sbjct: 4242 atcccatctccatctccatctcc 4220
>emb|BX832130.1|CNS0A0Y6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH53ZF03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1782 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 atcccatctccatctccatctcc 42 ||||||||||||||||||||||| Sbjct: 1076 atcccatctccatctccatctcc 1098
>emb|BX830858.1|CNS0A0RW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS31ZD05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1671 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 20 atcccatctccatctccatctcc 42 ||||||||||||||||||||||| Sbjct: 1060 atcccatctccatctccatctcc 1082
>emb|AL928883.19| Mouse DNA sequence from clone RP23-60E18 on chromosome 2, complete sequence Length = 208470 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 29 ccatctccatctcccccggcagc 51 ||||||||||||||||||||||| Sbjct: 7214 ccatctccatctcccccggcagc 7236
>emb|CR855030.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0131J24, complete sequence Length = 84805 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctccc 43 |||||||||||||||||||||| Sbjct: 51551 cccatctccatctccatctccc 51572
>dbj|AK232320.1| Sus scrofa mRNA, clone:LVR010018H02, expressed in liver Length = 2320 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 gggaggaacaagaggaagtgga 142 |||||||||||||||||||||| Sbjct: 2270 gggaggaacaagaggaagtgga 2249
>ref|XM_001218852.1| Trypanosoma brucei hypothetical protein, unlikely (Tb927.1.1510) mRNA, complete cds Length = 408 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 17 ccaatcccatctccatctccatctcc 42 |||| ||||||||||||||||||||| Sbjct: 23 ccaaccccatctccatctccatctcc 48
>ref|NM_001058626.1| Oryza sativa (japonica cultivar-group) Os04g0129500 (Os04g0129500) mRNA, complete cds Length = 3675 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctccc 43 |||||||||||||||||||||| Sbjct: 9 cccatctccatctccatctccc 30
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 attcccaatcccaatcccatct 28 |||||||||||||||||||||| Sbjct: 12647249 attcccaatcccaatcccatct 12647228 Score = 42.1 bits (21), Expect = 6.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tcccatctccatctccatctccccc 45 ||||||||||||||||||| ||||| Sbjct: 6744405 tcccatctccatctccatcgccccc 6744381 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 8436574 cccatctccatctccatctcc 8436554
>emb|AL929603.2|TBBCHR1A1 Trypanosoma brucei chromosome 1, complete sequence Length = 1064672 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 17 ccaatcccatctccatctccatctcc 42 |||| ||||||||||||||||||||| Sbjct: 378479 ccaaccccatctccatctccatctcc 378454
>ref|XM_596626.2| PREDICTED: Bos taurus similar to synaptojanin 2 (LOC518435), mRNA Length = 2349 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 369 gggcttctcctgggacgcctcc 390 |||||||||||||||||||||| Sbjct: 1471 gggcttctcctgggacgcctcc 1450
>gb|AC099035.2| Drosophila melanogaster clone BACR37H13, complete sequence Length = 175448 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 tcccatctccatctccatctcc 42 |||||||||||||||||||||| Sbjct: 49293 tcccatctccatctccatctcc 49272
>gb|AC095018.2| Drosophila melanogaster clone BACR24L18, complete sequence Length = 163116 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 attcccaatcccaatcccatct 28 |||||||||||||||||||||| Sbjct: 135890 attcccaatcccaatcccatct 135911
>gb|AC123061.4| Mus musculus BAC clone RP23-216H22 from 14, complete sequence Length = 193093 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 tcccatctccatctccatctcc 42 |||||||||||||||||||||| Sbjct: 121713 tcccatctccatctccatctcc 121734 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ccatctccatctccatctccc 43 ||||||||||||||||||||| Sbjct: 121696 ccatctccatctccatctccc 121716
>ref|NM_137898.1| Drosophila melanogaster CG13534-RA (CG13534), mRNA Length = 489 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 tcccatctccatctccatctcc 42 |||||||||||||||||||||| Sbjct: 462 tcccatctccatctccatctcc 441
>dbj|AK139215.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730071I02 product:unclassifiable, full insert sequence Length = 5212 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 tcccatctccatctccatctcc 42 |||||||||||||||||||||| Sbjct: 983 tcccatctccatctccatctcc 1004 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ccatctccatctccatctccc 43 ||||||||||||||||||||| Sbjct: 966 ccatctccatctccatctccc 986
>gb|AC078925.18| Homo sapiens 12q BAC RP11-76C10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153284 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 tcccatctccatctccatctcc 42 |||||||||||||||||||||| Sbjct: 117239 tcccatctccatctccatctcc 117260
>emb|CR701510.2|CNS0G48I Tetraodon nigroviridis full-length cDNA Length = 1271 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 586 gaagatggaggtgatgaagagg 607 |||||||||||||||||||||| Sbjct: 340 gaagatggaggtgatgaagagg 361
>emb|CR693119.2|CNS0FXRF Tetraodon nigroviridis full-length cDNA Length = 1264 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 586 gaagatggaggtgatgaagagg 607 |||||||||||||||||||||| Sbjct: 340 gaagatggaggtgatgaagagg 361
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 ttcccaatcccaatcccatctc 29 |||||||||||||||||||||| Sbjct: 2775853 ttcccaatcccaatcccatctc 2775874
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctccc 43 |||||||||||||||||||||| Sbjct: 1845052 cccatctccatctccatctccc 1845073 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ccatctccatctccatctccc 43 ||||||||||||||||||||| Sbjct: 25233662 ccatctccatctccatctccc 25233642
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctccc 43 |||||||||||||||||||||| Sbjct: 9781309 cccatctccatctccatctccc 9781288 Score = 42.1 bits (21), Expect = 6.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 17 ccaatcccatctccatctccatctccccc 45 ||||||| |||||||||||||||||||| Sbjct: 3824716 ccaatcctctctccatctccatctccccc 3824744
>emb|AL022319.2|HS172B20 Human DNA sequence from clone RP1-172B20 on chromosome 22q12.3-13.1 Contains the 3' part of the CACNA1I gene for voltage-dependent calcium channel, alpha 1I subunit, ESTs, STSs, GSSs and a putative CpG island, complete sequence Length = 213721 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 23 ccatctccatctccatctcccc 44 |||||||||||||||||||||| Sbjct: 26980 ccatctccatctccatctcccc 27001
>emb|AL662964.3|OSJN00161 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H09, complete sequence Length = 155672 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctccc 43 |||||||||||||||||||||| Sbjct: 140320 cccatctccatctccatctccc 140341
>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025D05 Length = 145684 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctccc 43 |||||||||||||||||||||| Sbjct: 45559 cccatctccatctccatctccc 45538
>emb|X66826.1|STAMFWAX S.tuberosum Amf locus, Waxy locus DNA encoding pseudogene similar to beta-1,3-glucanases and beta-1,3-1,4-glucanases Length = 2980 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 tcccaatcccaatcccatctcc 30 |||||||||||||||||||||| Sbjct: 1049 tcccaatcccaatcccatctcc 1070
>gb|AC008351.4|AC008351 Drosophila melanogaster, chromosome 2R, region 59A-59C, BAC clone BACR09K23, complete sequence Length = 191438 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 tcccatctccatctccatctcc 42 |||||||||||||||||||||| Sbjct: 190747 tcccatctccatctccatctcc 190726
>dbj|AP005740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015A04 Length = 152058 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 ttcccaatcccaatcccatctc 29 |||||||||||||||||||||| Sbjct: 39002 ttcccaatcccaatcccatctc 39023
>dbj|AK120404.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088L21, full insert sequence Length = 3678 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctccc 43 |||||||||||||||||||||| Sbjct: 11 cccatctccatctccatctccc 32
>gb|AC161468.2| Gallus gallus BAC clone CH261-94J19 from chromosome unknown, complete sequence Length = 238361 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 14 atcccaatcccatctccatctccatc 39 ||||| |||||||||||||||||||| Sbjct: 157260 atccccatcccatctccatctccatc 157285
>gb|AC164569.3| Gallus gallus BAC clone CH261-138K23 from chromosome unknown, complete sequence Length = 248284 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 14 atcccaatcccatctccatctccatc 39 ||||| |||||||||||||||||||| Sbjct: 232966 atccccatcccatctccatctccatc 232941
>gb|AC007177.1|AC007177 Drosophila melanogaster, chromosome 2R, region 59C1-59C5, P1 clones DS06621 and DS02186, complete sequence Length = 101320 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 21 tcccatctccatctccatctcc 42 |||||||||||||||||||||| Sbjct: 92638 tcccatctccatctccatctcc 92659
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 21 tcccatctccatctccatctcc 42 |||||||||||||||||||||| Sbjct: 462012 tcccatctccatctccatctcc 461991
>gb|L31790.1|L31790 Drosophila melanogaster (P1 DS00846 (D02)) DNA sequence, complete sequence Length = 77447 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 attcccaatcccaatcccatct 28 |||||||||||||||||||||| Sbjct: 53743 attcccaatcccaatcccatct 53764
>gb|U30318.1|XLU30318 Xenopus laevis Nkx-related protein (XNkx-2.3) mRNA, complete cds Length = 1270 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 598 gatgaagaggaggaagacggtg 619 |||||||||||||||||||||| Sbjct: 546 gatgaagaggaggaagacggtg 567
>gb|L38674.1|XELTINHOMA Xenopus laevis XNkx-2.3 (allele XNkx-2.3a) mRNA, complete cds Length = 2482 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 598 gatgaagaggaggaagacggtg 619 |||||||||||||||||||||| Sbjct: 527 gatgaagaggaggaagacggtg 548
>gb|U31961.1|DMU31961 Drosophila melanogaster bithorax complex (BX-C), complete sequence Length = 338234 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 attcccaatcccaatcccatct 28 |||||||||||||||||||||| Sbjct: 161911 attcccaatcccaatcccatct 161932
>emb|CR855184.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0145C12, complete sequence Length = 79624 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ccatctccatctccatctccc 43 ||||||||||||||||||||| Sbjct: 31253 ccatctccatctccatctccc 31233
>ref|XM_001227552.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_09626) mRNA, complete cds Length = 1752 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ccatctccatctccatctccc 43 ||||||||||||||||||||| Sbjct: 1153 ccatctccatctccatctccc 1133
>ref|XM_001219933.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_00713) mRNA, complete cds Length = 1863 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 1749 cccatctccatctccatctcc 1729
>dbj|AK242096.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075142L02, full insert sequence Length = 3071 Score = 42.1 bits (21), Expect = 6.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 17 ccaatcccatctccatctccatctccccc 45 ||||||| |||||||||||||||||||| Sbjct: 51 ccaatcctctctccatctccatctccccc 79
>ref|NM_001069885.1| Oryza sativa (japonica cultivar-group) Os09g0454200 (Os09g0454200) mRNA, complete cds Length = 2174 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 1201 cccatctccatctccatctcc 1221
>ref|XM_001214492.1| Aspergillus terreus NIH2624 hypothetical protein (ATEG_05314) mRNA, complete cds Length = 2352 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 ggacggtggacgaggacgagg 160 ||||||||||||||||||||| Sbjct: 545 ggacggtggacgaggacgagg 565
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1610 ccagggcaaaacaacagcaac 1630 ||||||||||||||||||||| Sbjct: 12171963 ccagggcaaaacaacagcaac 12171943 Score = 42.1 bits (21), Expect = 6.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 23 ccatctccatctccatctcccccggcagc 51 |||||||||||||||||||| || ||||| Sbjct: 18953830 ccatctccatctccatctccaccagcagc 18953802
>dbj|AK226435.1| Arabidopsis thaliana mRNA for Na+/H+ exchanger 5, complete cds, clone: RAFL06-11-J19 Length = 1786 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 1567 cccatctccatctccatctcc 1547
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 408 cgacaagcaccgctacgacga 428 ||||||||||||||||||||| Sbjct: 795124 cgacaagcaccgctacgacga 795104
>ref|NM_120430.1| Arabidopsis thaliana unknown protein (AT5G03500) mRNA, complete cds Length = 1332 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 1172 cccatctccatctccatctcc 1152
>ref|NM_104315.2| Arabidopsis thaliana sodium:hydrogen antiporter/ solute:hydrogen antiporter (AT1G54370) mRNA, complete cds Length = 1768 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 1560 cccatctccatctccatctcc 1540
>gb|AC153609.2| Mus musculus 6 BAC RP23-77I23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221782 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 119051 cccatctccatctccatctcc 119071
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 cgcggcggctgcccggccgcg 283 ||||||||||||||||||||| Sbjct: 1376089 cgcggcggctgcccggccgcg 1376069
>ref|XM_629593.1| Dictyostelium discoideum AX4 putative histone-like transcription factor (DDB_0220098) mRNA, complete cds Length = 1653 Score = 42.1 bits (21), Expect = 6.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 586 gaagatggaggtgatgaagaggaggaaga 614 |||||||||||||| |||||||| ||||| Sbjct: 310 gaagatggaggtgaagaagaggaagaaga 338
>gb|AC120348.9| Mus musculus chromosome 5, clone RP23-55P22, complete sequence Length = 244565 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 95801 cccatctccatctccatctcc 95781
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 tcaaggacatgctcgcctcgc 367 ||||||||||||||||||||| Sbjct: 850114 tcaaggacatgctcgcctcgc 850134
>gb|AC149301.1| Solanum demissum chromosome 5 clone PGEC517A09, complete sequence Length = 133983 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ccatctccatctccatctccc 43 ||||||||||||||||||||| Sbjct: 123013 ccatctccatctccatctccc 123033
>gb|AC166817.3| Mus musculus BAC clone RP24-530C16 from chromosome 10, complete sequence Length = 155876 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1704 tataatcccaatatataatcc 1724 ||||||||||||||||||||| Sbjct: 49264 tataatcccaatatataatcc 49244
>gb|AC138641.10| Mus musculus chromosome 5, clone RP23-466K15, complete sequence Length = 175628 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 5054 cccatctccatctccatctcc 5074
>gb|AC115723.13| Mus musculus chromosome 5, clone RP23-17D18, complete sequence Length = 206470 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 66600 cccatctccatctccatctcc 66580
>gb|AC008194.9| Drosophila melanogaster clone BACR49A05, complete sequence Length = 181437 Score = 42.1 bits (21), Expect = 6.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 23 ccatctccatctccatctcccccggcagc 51 |||||||||||||||||||| || ||||| Sbjct: 16240 ccatctccatctccatctccaccagcagc 16212
>gb|AC009219.7| Drosophila melanogaster clone BACR32N16, complete sequence Length = 159007 Score = 42.1 bits (21), Expect = 6.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tcccatctccatctccatctccccc 45 ||||||||||||||||||| ||||| Sbjct: 141139 tcccatctccatctccatcgccccc 141115
>gb|AC104516.2| Drosophila melanogaster clone BACR20O17, complete sequence Length = 174404 Score = 42.1 bits (21), Expect = 6.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 23 ccatctccatctccatctcccccggcagc 51 |||||||||||||||||||| || ||||| Sbjct: 127123 ccatctccatctccatctccaccagcagc 127095
>ref|XM_652748.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0236.2), mRNA Length = 3150 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 2580 cccatctccatctccatctcc 2560
>gb|AC145557.3| Mus musculus BAC clone RP23-313I19 from chromosome 19, complete sequence Length = 226099 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ccatctccatctccatctccc 43 ||||||||||||||||||||| Sbjct: 55344 ccatctccatctccatctccc 55324
>gb|AC140193.3| Mus musculus BAC clone RP23-247C12 from chromosome 19, complete sequence Length = 173527 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ccatctccatctccatctccc 43 ||||||||||||||||||||| Sbjct: 23235 ccatctccatctccatctccc 23255
>gb|AC005287.4| Arabidopsis thaliana chromosome I BAC F20D21 genomic sequence, complete sequence Length = 143186 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 64857 cccatctccatctccatctcc 64877
>gb|AC122880.4| Mus musculus BAC clone RP23-77F18 from 8, complete sequence Length = 189549 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ccatctccatctccatctccc 43 ||||||||||||||||||||| Sbjct: 91362 ccatctccatctccatctccc 91342
>gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, complete sequence Length = 264425 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 257081 cccatctccatctccatctcc 257101
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 46696 cccatctccatctccatctcc 46716
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1467 agtgttctaatgcactgtgtt 1487 ||||||||||||||||||||| Sbjct: 2414708 agtgttctaatgcactgtgtt 2414688
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 acgtcgactcccggctcaagg 322 ||||||||||||||||||||| Sbjct: 4337018 acgtcgactcccggctcaagg 4337038
>ref|XM_663404.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.70226) partial mRNA Length = 1269 Score = 42.1 bits (21), Expect = 6.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 582 gagcgaagatggaggtgatgaagaggaggaaga 614 ||||||||| || |||||||||||| ||||||| Sbjct: 387 gagcgaagaaggtggtgatgaagagaaggaaga 419
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03, from chromosome 3, complete sequence Length = 125800 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 103609 cccatctccatctccatctcc 103629
>dbj|AK080499.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730059M11 product:unclassifiable, full insert sequence Length = 1267 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1704 tataatcccaatatataatcc 1724 ||||||||||||||||||||| Sbjct: 621 tataatcccaatatataatcc 601
>gb|AC023687.3| Drosophila melanogaster X BAC RP98-36C7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185848 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1610 ccagggcaaaacaacagcaac 1630 ||||||||||||||||||||| Sbjct: 89350 ccagggcaaaacaacagcaac 89370
>tpg|BK003208.1| TPA_inf: Drosophila melanogaster HDC19653 (HDC19653) gene, complete cds Length = 180 Score = 42.1 bits (21), Expect = 6.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 23 ccatctccatctccatctcccccggcagc 51 |||||||||||||||||||| || ||||| Sbjct: 91 ccatctccatctccatctccaccagcagc 63
>tpg|BK002494.1| TPA_inf: Drosophila melanogaster HDC13252 (HDC13252) gene, complete cds Length = 5513 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 5314 cccatctccatctccatctcc 5294
>emb|Z81082.1| Caenorhabditis elegans Cosmid F42G4, complete sequence Length = 35240 Score = 42.1 bits (21), Expect = 6.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1397 ttgcagcaatggtagttgagaattt 1421 ||||||||||||||||||| ||||| Sbjct: 6904 ttgcagcaatggtagttgacaattt 6928
>emb|BX571713.11| Zebrafish DNA sequence from clone DKEY-19H21 in linkage group 9, complete sequence Length = 103882 Score = 42.1 bits (21), Expect = 6.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 586 gaagatggaggtgatgaagaggaggaaga 614 ||||| |||||||| |||||||||||||| Sbjct: 29244 gaagaaggaggtgaagaagaggaggaaga 29272
>gb|AF490589.1| Arabidopsis thaliana Na+/H+ exchanger 5 (NHX5) mRNA, complete cds Length = 1554 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 1548 cccatctccatctccatctcc 1528
>gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete sequence Length = 150214 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1630 cctaaaattgcagaaatgaaa 1650 ||||||||||||||||||||| Sbjct: 78517 cctaaaattgcagaaatgaaa 78497
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 17009445 cccatctccatctccatctcc 17009425
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 6.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tcccatctccatctccatctccccc 45 |||||||||||||||| |||||||| Sbjct: 7123817 tcccatctccatctccctctccccc 7123793
>gb|AC121318.17| Mus musculus chromosome 1, clone RP24-377P1, complete sequence Length = 179884 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 111160 cccatctccatctccatctcc 111140
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 10388244 cccatctccatctccatctcc 10388264
>emb|AL365273.25| Human DNA sequence from clone RP11-429G19 on chromosome 10 Contains the 3' end of the ENTPD1 gene for ectonucleoside triphosphate diphosphohydrolase 1, a novel gene, the 3' end of two novel genes (FLJ34077, FLJ39150), complete sequence Length = 191942 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1676 ctactctctttctaaaaagaa 1696 ||||||||||||||||||||| Sbjct: 55985 ctactctctttctaaaaagaa 56005
>gb|AC022325.5| Homo sapiens BAC clone RP11-391J13 from 4, complete sequence Length = 193057 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 594 aggtgatgaagaggaggaaga 614 ||||||||||||||||||||| Sbjct: 184266 aggtgatgaagaggaggaaga 184286
>gb|AC007668.7| Drosophila melanogaster, chromosome 3R, region 87C-87C, BAC clone BACR02G11, complete sequence Length = 167239 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 145817 cccatctccatctccatctcc 145797
>gb|AC093101.1| Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR06I01, complete sequence Length = 175167 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 62144 cccatctccatctccatctcc 62124
>emb|Y12464.1|SBPPSTK S.bicolor DNA for gene encoding putative protein serine/threonine kinase, clone cSNFL1 Length = 2129 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ccatctccatctccatctccc 43 ||||||||||||||||||||| Sbjct: 56 ccatctccatctccatctccc 76
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 519 agcggccagggaggcggtgga 539 ||||||||||||||||||||| Sbjct: 2428403 agcggccagggaggcggtgga 2428383
>emb|CR380949.1| Candida glabrata strain CBS138 chromosome C complete sequence Length = 558804 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 87164 cccatctccatctccatctcc 87184
>emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002J11, complete sequence Length = 143582 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ccatctccatctccatctccc 43 ||||||||||||||||||||| Sbjct: 15802 ccatctccatctccatctccc 15782
>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07, complete sequence Length = 130779 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ccatctccatctccatctccc 43 ||||||||||||||||||||| Sbjct: 115329 ccatctccatctccatctccc 115309
>emb|AL162751.1|ATF12E4 Arabidopsis thaliana DNA chromosome 5, BAC clone F12E4 (ESSA project) Length = 121552 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 87458 cccatctccatctccatctcc 87478
>gb|AC007752.6|AC007752 Drosophila melanogaster, chromosome 3R, region 87C-87D, BAC clone BACR07J06, complete sequence Length = 193248 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 53369 cccatctccatctccatctcc 53349
>gb|AC016157.2|AC016157 Drosophila melanogaster, chromosome 3R, region 86C-86D, BAC clone BACR48M22, complete sequence Length = 161549 Score = 42.1 bits (21), Expect = 6.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tcccatctccatctccatctccccc 45 ||||||||||||||||||| ||||| Sbjct: 37146 tcccatctccatctccatcgccccc 37122
>gb|AC103882.5| Homo sapiens BAC clone RP11-733G6 from 2, complete sequence Length = 159249 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 151468 cccatctccatctccatctcc 151448
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 42.1 bits (21), Expect = 6.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 17 ccaatcccatctccatctccatctccccc 45 ||||||| |||||||||||||||||||| Sbjct: 98258 ccaatcctctctccatctccatctccccc 98286
>dbj|AK176568.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL25-10-A09 Length = 1286 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 974 cccatctccatctccatctcc 954
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 139258 cccatctccatctccatctcc 139238
>dbj|AP005170.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0080E19 Length = 152755 Score = 42.1 bits (21), Expect = 6.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tcccatctccatctccatctccccc 45 |||||||||||||||| |||||||| Sbjct: 144604 tcccatctccatctccctctccccc 144580
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 42.1 bits (21), Expect = 6.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 tcccatctccatctccatctccccc 45 |||||||||||||||| |||||||| Sbjct: 1228 tcccatctccatctccctctccccc 1204
>dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0025H07 Length = 145605 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 3104 cccatctccatctccatctcc 3084
>gb|AF013593.2| Homo sapiens chromosome X multiple clones map q28, complete sequence Length = 85806 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1370 agctctagaagttctgattca 1390 ||||||||||||||||||||| Sbjct: 12235 agctctagaagttctgattca 12255
>dbj|AK121117.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074A22, full insert sequence Length = 2175 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 1202 cccatctccatctccatctcc 1222
>ref|XM_570516.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CND03140) partial mRNA Length = 5339 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 tcaaggacatgctcgcctcgc 367 ||||||||||||||||||||| Sbjct: 1434 tcaaggacatgctcgcctcgc 1414
>gb|AC169371.2| Sorghum bicolor clone SB_BBc0127F08, complete sequence Length = 70712 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 54622 cccatctccatctccatctcc 54602
>dbj|AK105819.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-D04, full insert sequence Length = 1552 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 579 cccatctccatctccatctcc 599
>emb|CR377577.1| Pinus pinaster SSR, clone PPA7F08 Length = 406 Score = 42.1 bits (21), Expect = 6.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 130 aagaggaagtggacggtggacgaggacgaggag 162 ||||||||||||| |||||| ||||| |||||| Sbjct: 406 aagaggaagtggaaggtggaggaggaagaggag 374
>dbj|AK101045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033005H20, full insert sequence Length = 2170 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 1197 cccatctccatctccatctcc 1217
>ref|XM_445219.1| Candida glabrata CBS138, CAGL0C00847g partial mRNA Length = 2373 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 1035 cccatctccatctccatctcc 1055
>emb|BX649229.2| Chicken DNA sequence from clone WAG-41C10, complete sequence Length = 147869 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cccatctccatctccatctcc 42 ||||||||||||||||||||| Sbjct: 15753 cccatctccatctccatctcc 15773
>dbj|AP001889.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-344L21, complete sequence Length = 186656 Score = 42.1 bits (21), Expect = 6.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1073 aacaggatgtcagagtaagagccat 1097 ||||||||||||||||||| ||||| Sbjct: 150842 aacaggatgtcagagtaagtgccat 150818
>dbj|AP000901.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-686G14, complete sequence Length = 205903 Score = 42.1 bits (21), Expect = 6.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1073 aacaggatgtcagagtaagagccat 1097 ||||||||||||||||||| ||||| Sbjct: 668 aacaggatgtcagagtaagtgccat 644
>gb|AC144813.3| Mus musculus BAC clone RP24-324I23 from 9, complete sequence Length = 146104 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 tcccatctccatctccatctc 41 ||||||||||||||||||||| Sbjct: 73702 tcccatctccatctccatctc 73722
>gb|AC116483.10| Mus musculus chromosome 1, clone RP23-424K5, complete sequence Length = 194546 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ccatctccatctccatctccc 43 ||||||||||||||||||||| Sbjct: 32088 ccatctccatctccatctccc 32108
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1618 aaacaacagcaacctaaaatt 1638 ||||||||||||||||||||| Sbjct: 2091620 aaacaacagcaacctaaaatt 2091600
>gb|AC121101.8| Mus musculus chromosome 8, clone RP24-511A8, complete sequence Length = 158957 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ccatctccatctccatctccc 43 ||||||||||||||||||||| Sbjct: 82895 ccatctccatctccatctccc 82875
>emb|CT485604.3| Pan troglodytes chromosome X clone PTB-004I10 map Xq28, complete sequence Length = 109609 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1370 agctctagaagttctgattca 1390 ||||||||||||||||||||| Sbjct: 96314 agctctagaagttctgattca 96334
>gb|AC131120.4| Mus musculus BAC clone RP24-547N4 from 10, complete sequence Length = 228657 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1704 tataatcccaatatataatcc 1724 ||||||||||||||||||||| Sbjct: 181639 tataatcccaatatataatcc 181619
>gb|AC111011.6| Mus musculus BAC clone RP23-424D18 from 1, complete sequence Length = 201846 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ccatctccatctccatctccc 43 ||||||||||||||||||||| Sbjct: 88574 ccatctccatctccatctccc 88594
>emb|AL808143.5| Mouse DNA sequence from clone RP23-384K11 on chromosome 2, complete sequence Length = 202474 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 catctccatctccatctcccc 44 ||||||||||||||||||||| Sbjct: 63954 catctccatctccatctcccc 63934
>emb|AL731839.13| Mouse DNA sequence from clone RP23-76O22 on chromosome X, complete sequence Length = 228355 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ccatctccatctccatctccc 43 ||||||||||||||||||||| Sbjct: 148476 ccatctccatctccatctccc 148496 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 284,287,198 Number of extensions: 14994414 Number of successful extensions: 352266 Number of sequences better than 10.0: 145 Number of HSP's gapped: 352153 Number of HSP's successfully gapped: 159 Length of query: 1740 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1717 Effective length of database: 18,503,978,556 Effective search space: 31771331180652 Effective search space used: 31771331180652 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
