| Clone Name | FLbaf178p22 |
|---|---|
| Clone Library Name | barley_pub |
>P54487:YQGE_BACSU Uncharacterized protein yqgE - Bacillus subtilis| Length = 430 Score = 34.3 bits (77), Expect = 0.79 Identities = 18/82 (21%), Positives = 40/82 (48%) Frame = +2 Query: 266 TLSGISSLGVLFESTFIGIYIWFAPREKKKLVMMMVSPILIIFGMAVFFTSFSFHTHQMR 445 T+ G+ SLG+ +TF+ +Y+W ++ K + + + + I+ + F ++ Sbjct: 22 TIGGLYSLGIALSNTFVNVYLW---KQSGKFIDLAIYNLSIVTMQPITFYLAGRLAKKID 78 Query: 446 KEFVGSIGLVASILMYGSPLVA 511 + F+ G++ Y S L+A Sbjct: 79 RVFILRFGVIFLAAFYLSVLLA 100
>Q9ERS1:KCNKC_RAT Potassium channel subfamily K member 12 - Rattus norvegicus (Rat)| Length = 430 Score = 33.9 bits (76), Expect = 1.0 Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%) Frame = -3 Query: 860 RHSVQRKENVFVAQEGSLGLRLWLFVPSCCLG*LQLSVHLLAQYQDSSWVLPCICCKCST 681 +H+ R + ++ LG L++ + CC+ L + +L + Q +W+L + C+C T Sbjct: 266 QHAAYRNQGLY-----RLGNFLFILLGVCCIYSLFNVISILIK-QVLNWMLRKLSCRCCT 319 Query: 680 R--PTEGYPLSSQ*SLVP 633 R P G PLS + ++ P Sbjct: 320 RCCPAPGAPLSRRNAITP 337
>Q06644:PMT7_YEAST Dolichyl-phosphate-mannose--protein mannosyltransferase 7 -| Saccharomyces cerevisiae (Baker's yeast) Length = 662 Score = 33.1 bits (74), Expect = 1.8 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%) Frame = +2 Query: 200 LFSSLTYTWYGLPVVSSGWENWTLSGIS---SLGVLFESTFIGIYIW 331 LFS + Y++ + + G NW + I+ SLG+ S FIGI W Sbjct: 162 LFSVVIYSFISISIAKLGTTNWFANVITLSISLGLAISSKFIGIVTW 208
>P75569:PTG3C_MYCPN PTS system glucose-specific EIICBA component - Mycoplasma| pneumoniae Length = 940 Score = 32.0 bits (71), Expect = 3.9 Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 2/83 (2%) Frame = +2 Query: 185 PYILTLFSSLTYTWYGLPVVSSGWENWTLSGI-SSLGVLFESTFIGIYIWFA-PREKKKL 358 P+ T + +YG+ V + W ++ + +++G F +FI ++ A P ++ L Sbjct: 534 PFEFTFLFLAPWLFYGVHAVLAAVSFWLMNILGANVGQTFSGSFIDFILYGALPDGRRWL 593 Query: 359 VMMMVSPILIIFGMAVFFTSFSF 427 + PI+ +F A++F +F F Sbjct: 594 ANSYLVPIIGLFLAAIYFPTFYF 616
>Q8EFB4:HIS5_SHEON Imidazole glycerol phosphate synthase subunit hisH - Shewanella| oneidensis Length = 221 Score = 31.6 bits (70), Expect = 5.1 Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Frame = +2 Query: 74 VTTGIIGSVVCFLLYAAPILTFKRVIKKGSVEEYSC-----IPYILTLFSSLTYTWYGLP 238 +T ++G VC + +L+ +R + + + C IP + +S T GLP Sbjct: 76 LTQPVLG--VCLGMQMLTLLSKERGGQALDCQAHDCKCLGIIPTEIDELNSQTLKAEGLP 133 Query: 239 VVSSGWENWTLSGISSLGVLFESTFIGIYIWF 334 + GW T S S + LF G Y++F Sbjct: 134 LPHMGWNQLTFSNPSQVHPLFAGVEAGSYVYF 165
>P51794:CLCN4_RAT Chloride channel protein 4 - Rattus norvegicus (Rat)| Length = 747 Score = 31.6 bits (70), Expect = 5.1 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -1 Query: 373 YHHHDKFLFLSWCKP 329 YHHHD +F +WC+P Sbjct: 479 YHHHDWIIFRNWCRP 493
>Q61418:CLCN4_MOUSE Chloride channel protein 4 - Mus musculus (Mouse)| Length = 747 Score = 31.6 bits (70), Expect = 5.1 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -1 Query: 373 YHHHDKFLFLSWCKP 329 YHHHD +F +WC+P Sbjct: 479 YHHHDWIIFRNWCRP 493
>P51793:CLCN4_HUMAN Chloride channel protein 4 - Homo sapiens (Human)| Length = 760 Score = 31.6 bits (70), Expect = 5.1 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -1 Query: 373 YHHHDKFLFLSWCKP 329 YHHHD +F +WC+P Sbjct: 492 YHHHDWIIFRNWCRP 506
>Q10482:STM1_SCHPO Seven transmembrane protein 1 - Schizosaccharomyces pombe (Fission| yeast) Length = 271 Score = 31.2 bits (69), Expect = 6.7 Identities = 24/86 (27%), Positives = 41/86 (47%) Frame = +2 Query: 77 TTGIIGSVVCFLLYAAPILTFKRVIKKGSVEEYSCIPYILTLFSSLTYTWYGLPVVSSGW 256 T G I SV L + A I + K S E S I ++L + +Y + L +S + Sbjct: 180 TAGCISSV---LYFCARIPQIIKNHKAKSTEGLSIIFFVLASVGNTSYAFSILVFPASDY 236 Query: 257 ENWTLSGISSLGVLFESTFIGIYIWF 334 N+T + + + F + F+ IYI++ Sbjct: 237 LNYTYANLPWILGAFSTIFLDIYIFY 262 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 183,109,378 Number of extensions: 4223263 Number of successful extensions: 9831 Number of sequences better than 10.0: 9 Number of HSP's gapped: 9830 Number of HSP's successfully gapped: 9 Length of query: 325 Length of database: 100,686,439 Length adjustment: 113 Effective length of query: 212 Effective length of database: 69,691,104 Effective search space: 14774514048 Effective search space used: 14774514048 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)