| Clone Name | FLbaf178p20 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT832340.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA009G10, full insert sequence Length = 687 Score = 377 bits (190), Expect = e-101 Identities = 268/294 (91%) Strand = Plus / Plus Query: 529 ctaatggcagagcttgaaaggattaaaaaagaaagagctgaggacaggcttagaaaggag 588 |||||||||||||||||||| || || |||||||||||||| || | |||||||||||| Sbjct: 221 ctaatggcagagcttgaaagaatcaagaaagaaagagctgaagaaaagcttagaaaggaa 280 Query: 589 cgtcagcaagcagaagaagaggccaagatgaaggaggctgagctgatgcgaggaaacccg 648 || || ||||||||||| ||||| ||||||||||| ||||| |||||||| |||||||| Sbjct: 281 cgccaacaagcagaagaggaggctaagatgaaggaagctgaactgatgcggggaaacccc 340 Query: 649 ctgatcaatatgaataactccggctccttcaacgtgaagagaaggtgggatgatgatgtt 708 ||||||||||| || ||| |||| |||||||| || |||||||||||||||||||||||| Sbjct: 341 ctgatcaatattaacaacgccggatccttcaatgttaagagaaggtgggatgatgatgtt 400 Query: 709 gtattcaagaaccaggctcgtggagagaccaagacaccgaaacggttcatcaacgacacc 768 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 401 gtattcaagaaccaggctcgtggagagaccaagacaccgaaacgtttcatcaacgacact 460 Query: 769 atcagaagtgatttccaccgcaagtttctgcataggtacatgaaatgatgctgc 822 |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 461 atcagaagtgatttccaccgtaagtttctgcagaggtacatgaagtgatgctgc 514 Score = 63.9 bits (32), Expect = 1e-06 Identities = 130/162 (80%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 315 acttgaggagcgtgaacgcaagcacttctcatccaaggataagtcctatgttgacgagag 374 ||||||||||||||| | ||||||| ||| || ||||| |||||||||| ||| ||||| Sbjct: 1 acttgaggagcgtgagaggaagcactactcgtcaaaggacaagtcctatgctgaggagag 60 Query: 375 ggaccggcgaaaaagttcaagcctgcttttagaaggttcaaaaag---ggatgaagataa 431 || |||| ||||| ||||||| || |||||||||||| || || ||| ||||| Sbjct: 61 agataggcggaaaagcacaagcctactcctagaaggttcaaggagagaggctgaggataa 120 Query: 432 gatagttccacgtgaaattgatgcagacgactctgacgtgga 473 ||||||||| | ||||| |||||||| || ||||| ||||| Sbjct: 121 gatagttcctagagaaatcgatgcagatgattctgatgtgga 162
>ref|NM_001063097.1| Oryza sativa (japonica cultivar-group) Os06g0106100 (Os06g0106100) mRNA, complete cds Length = 1148 Score = 369 bits (186), Expect = 1e-98 Identities = 267/294 (90%) Strand = Plus / Plus Query: 529 ctaatggcagagcttgaaaggattaaaaaagaaagagctgaggacaggcttagaaaggag 588 |||||||||||||||||||| || || |||||||||||||| || | ||||||||||| Sbjct: 507 ctaatggcagagcttgaaagaatcaagaaagaaagagctgaagaaaaccttagaaaggaa 566 Query: 589 cgtcagcaagcagaagaagaggccaagatgaaggaggctgagctgatgcgaggaaacccg 648 || || ||||||||||| ||||| ||||||||||| ||||| |||||||| |||||||| Sbjct: 567 cgccaacaagcagaagaggaggctaagatgaaggaagctgaactgatgcggggaaacccc 626 Query: 649 ctgatcaatatgaataactccggctccttcaacgtgaagagaaggtgggatgatgatgtt 708 ||||||||||| || ||| |||| |||||||| || |||||||||||||||||||||||| Sbjct: 627 ctgatcaatattaacaacgccggatccttcaatgttaagagaaggtgggatgatgatgtt 686 Query: 709 gtattcaagaaccaggctcgtggagagaccaagacaccgaaacggttcatcaacgacacc 768 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 687 gtattcaagaaccaggctcgtggagagaccaagacaccgaaacgtttcatcaacgacact 746 Query: 769 atcagaagtgatttccaccgcaagtttctgcataggtacatgaaatgatgctgc 822 |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 747 atcagaagtgatttccaccgtaagtttctgcagaggtacatgaagtgatgctgc 800 Score = 281 bits (142), Expect = 2e-72 Identities = 297/348 (85%), Gaps = 3/348 (0%) Strand = Plus / Plus Query: 129 gatgacgacggcggcgcggcctacgtgggcgccggcgaagggcgggaacgagcagggcgg 188 |||||| |||||||||||||| || ||||| ||||| |||||||| |||||||||||||| Sbjct: 101 gatgaccacggcggcgcggccgacctgggctccggccaagggcggcaacgagcagggcgg 160 Query: 189 cacgcgcatcttcgggccctccgggaagtactcctcccgcgacctcgccgcccacacctc 248 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 161 cacccgcatcttcgggccctcgcagaagtactcctcccgcgacctcgccgcccacaccac 220 Query: 249 cctcaagcccagaaaagagggacaacaaactcaagaggaggtacagaagaggaatcttag 308 |||||||||||| ||||| |||||||| || ||||| ||| |||||||||||||||| || Sbjct: 221 cctcaagcccaggaaagaaggacaacatacccaagaagagttacagaagaggaatctcag 280 Query: 309 ggatgaacttgaggagcgtgaacgcaagcacttctcatccaaggataagtcctatgttga 368 ||| ||||||||||||||||| | ||||||| ||| || ||||| |||||||||| ||| Sbjct: 281 ggacgaacttgaggagcgtgagaggaagcactactcgtcaaaggacaagtcctatgctga 340 Query: 369 cgagagggaccggcgaaaaagttcaagcctgcttttagaaggttcaaaaag---ggatga 425 ||||| || |||| ||||| ||||||| || |||||||||||| || || ||| Sbjct: 341 ggagagagataggcggaaaagcacaagcctactcctagaaggttcaaggagagaggctga 400 Query: 426 agataagatagttccacgtgaaattgatgcagacgactctgacgtgga 473 |||||||||||||| | ||||| |||||||| || ||||| ||||| Sbjct: 401 ggataagatagttcctagagaaatcgatgcagatgattctgatgtgga 448
>dbj|AK111784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086E16, full insert sequence Length = 1151 Score = 369 bits (186), Expect = 1e-98 Identities = 267/294 (90%) Strand = Plus / Plus Query: 529 ctaatggcagagcttgaaaggattaaaaaagaaagagctgaggacaggcttagaaaggag 588 |||||||||||||||||||| || || |||||||||||||| || | ||||||||||| Sbjct: 508 ctaatggcagagcttgaaagaatcaagaaagaaagagctgaagaaaaccttagaaaggaa 567 Query: 589 cgtcagcaagcagaagaagaggccaagatgaaggaggctgagctgatgcgaggaaacccg 648 || || ||||||||||| ||||| ||||||||||| ||||| |||||||| |||||||| Sbjct: 568 cgccaacaagcagaagaggaggctaagatgaaggaagctgaactgatgcggggaaacccc 627 Query: 649 ctgatcaatatgaataactccggctccttcaacgtgaagagaaggtgggatgatgatgtt 708 ||||||||||| || ||| |||| |||||||| || |||||||||||||||||||||||| Sbjct: 628 ctgatcaatattaacaacgccggatccttcaatgttaagagaaggtgggatgatgatgtt 687 Query: 709 gtattcaagaaccaggctcgtggagagaccaagacaccgaaacggttcatcaacgacacc 768 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 688 gtattcaagaaccaggctcgtggagagaccaagacaccgaaacgtttcatcaacgacact 747 Query: 769 atcagaagtgatttccaccgcaagtttctgcataggtacatgaaatgatgctgc 822 |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 748 atcagaagtgatttccaccgtaagtttctgcagaggtacatgaagtgatgctgc 801 Score = 274 bits (138), Expect = 6e-70 Identities = 296/348 (85%), Gaps = 3/348 (0%) Strand = Plus / Plus Query: 129 gatgacgacggcggcgcggcctacgtgggcgccggcgaagggcgggaacgagcagggcgg 188 |||||| |||||||||||||| || ||||| ||||| |||||||| |||||||||||||| Sbjct: 102 gatgaccacggcggcgcggccgacctgggctccggccaagggcggcaacgagcagggcgg 161 Query: 189 cacgcgcatcttcgggccctccgggaagtactcctcccgcgacctcgccgcccacacctc 248 ||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||| | Sbjct: 162 cacccgcatcttcgggccctcgcagaagtactcctcccgcgacttcgccgcccacaccac 221 Query: 249 cctcaagcccagaaaagagggacaacaaactcaagaggaggtacagaagaggaatcttag 308 |||||||||||| ||||| |||||||| || ||||| ||| |||||||||||||||| || Sbjct: 222 cctcaagcccaggaaagaaggacaacatacccaagaagagttacagaagaggaatctcag 281 Query: 309 ggatgaacttgaggagcgtgaacgcaagcacttctcatccaaggataagtcctatgttga 368 ||| ||||||||||||||||| | ||||||| ||| || ||||| |||||||||| ||| Sbjct: 282 ggacgaacttgaggagcgtgagaggaagcactactcgtcaaaggacaagtcctatgctga 341 Query: 369 cgagagggaccggcgaaaaagttcaagcctgcttttagaaggttcaaaaag---ggatga 425 ||||| || |||| ||||| ||||||| || |||||||||||| || || ||| Sbjct: 342 ggagagagataggcggaaaagcacaagcctactcctagaaggttcaaggagagaggctga 401 Query: 426 agataagatagttccacgtgaaattgatgcagacgactctgacgtgga 473 |||||||||||||| | ||||| |||||||| || ||||| ||||| Sbjct: 402 ggataagatagttcctagagaaatcgatgcagatgattctgatgtgga 449
>gb|AY596522.1| Saccharum officinarum clone SCQGLR1019B07, complete sequence Length = 997 Score = 321 bits (162), Expect = 3e-84 Identities = 258/290 (88%) Strand = Plus / Plus Query: 529 ctaatggcagagcttgaaaggattaaaaaagaaagagctgaggacaggcttagaaaggag 588 ||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||||| Sbjct: 458 ctaatggcagagcttgagaggattaagaaagaaagagctgaggagaagcttagaaaggag 517 Query: 589 cgtcagcaagcagaagaagaggccaagatgaaggaggctgagctgatgcgaggaaacccg 648 || || ||||||||||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 518 cggcaacaagcagaagaggaggccaagatgaaggaggctgaactgatgcggggaaaccct 577 Query: 649 ctgatcaatatgaataactccggctccttcaacgtgaagagaaggtgggatgatgatgtt 708 |||| ||||| || || | |||||||||| || |||||||||||||| |||||||| Sbjct: 578 ttgattaatatcaacaatcctggctccttcagtgttaagagaaggtgggacgatgatgtg 637 Query: 709 gtattcaagaaccaggctcgtggagagaccaagacaccgaaacggttcatcaacgacacc 768 || ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 638 gttttcaagaaccaagcacgtggagagaccaagacaccgaaacggttcatcaacgatacc 697 Query: 769 atcagaagtgatttccaccgcaagtttctgcataggtacatgaaatgatg 818 ||||| |||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 698 atcaggagtgatttccaccgtaaatttcttcagaggtacatgaagtgatg 747 Score = 319 bits (161), Expect = 1e-83 Identities = 306/353 (86%), Gaps = 6/353 (1%) Strand = Plus / Plus Query: 129 gatgacgacggcggcgcggcctacgtgggcgccggcgaagggcgggaacgagcagggcgg 188 |||||||||||||||||| || || ||||||||||| |||||||| ||||||||||| || Sbjct: 49 gatgacgacggcggcgcgccccacctgggcgccggccaagggcggcaacgagcagggggg 108 Query: 189 cacgcgcatcttcgggccctccgggaagtactcctcccgcgacctcgccgcccacacctc 248 ||| ||||||||||| |||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 109 cacccgcatcttcggcccctcccagaagtactcctcccgcgacctcgccgcgcacacctc 168 Query: 249 cctcaagcccagaaaagagggacaacaaactcaagaggaggtacagaagaggaatcttag 308 |||||||||||||||||| || |||||||| ||||||||| ||||||||||| | | || Sbjct: 169 cctcaagcccagaaaagacggtcaacaaacccaagaggagttacagaagagggacttcag 228 Query: 309 ggatgaacttgaggagcgtgaacgcaagcacttctcatccaaggataagtcctatgttga 368 ||| ||||||||||| || || |||||||||| ||| ||||||||||||||||||| ||| Sbjct: 229 ggaggaacttgaggaacgcgagcgcaagcactactcttccaaggataagtcctatgctga 288 Query: 369 cgagagggaccggcgaaaaagttcaagc---ctgcttttagaaggttcaaaaag---gga 422 || || |||||||| ||||| |||||| || || |||||||||||||| || || Sbjct: 289 agaaagagaccggcggaaaagctcaagccagctactcttagaaggttcaaagagagaggc 348 Query: 423 tgaagataagatagttccacgtgaaattgatgcagacgactctgacgtggagc 475 || ||||||||||||||||| ||||| |||||||| |||||||| ||||||| Sbjct: 349 agaggataagatagttccacgagaaatcgatgcagatgactctgatgtggagc 401
>gb|AY105042.1| Zea mays PCO098401 mRNA sequence Length = 1154 Score = 301 bits (152), Expect = 3e-78 Identities = 251/284 (88%) Strand = Plus / Plus Query: 529 ctaatggcagagcttgaaaggattaaaaaagaaagagctgaggacaggcttagaaaggag 588 ||||||||||||||||| |||||||| ||||||||||| ||||| | ||||||||||||| Sbjct: 556 ctaatggcagagcttgagaggattaagaaagaaagagccgaggagaagcttagaaaggag 615 Query: 589 cgtcagcaagcagaagaagaggccaagatgaaggaggctgagctgatgcgaggaaacccg 648 || || ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 616 cggcaacaagcagaagaggaggccaagatgaaggaggctgaactgatgcggggaaacccg 675 Query: 649 ctgatcaatatgaataactccggctccttcaacgtgaagagaaggtgggatgatgatgtt 708 |||| ||||| || || | |||||||||| || |||||||||||||| || || || Sbjct: 676 ttgattaatatcaacaatgctggctccttcagtgttaagagaaggtgggacgacgacgtg 735 Query: 709 gtattcaagaaccaggctcgtggagagaccaagacaccgaaacggttcatcaacgacacc 768 ||||||||||| || || || ||||||||||||||||||||||||||||||||||||||| Sbjct: 736 gtattcaagaatcaagcacgaggagagaccaagacaccgaaacggttcatcaacgacacc 795 Query: 769 atcagaagtgatttccaccgcaagtttctgcataggtacatgaa 812 ||||| |||||||||||||| || ||||| || ||||||||||| Sbjct: 796 atcaggagtgatttccaccgtaaatttcttcagaggtacatgaa 839 Score = 287 bits (145), Expect = 4e-74 Identities = 302/353 (85%), Gaps = 6/353 (1%) Strand = Plus / Plus Query: 129 gatgacgacggcggcgcggcctacgtgggcgccggcgaagggcgggaacgagcagggcgg 188 ||||||||| |||||||| || || ||||||||||| |||||||| ||||||||||| || Sbjct: 150 gatgacgaccgcggcgcgccccacctgggcgccggccaagggcggcaacgagcagggggg 209 Query: 189 cacgcgcatcttcgggccctccgggaagtactcctcccgcgacctcgccgcccacacctc 248 ||| ||||||||||| |||||| ||||| ||||||||||||||||||||| |||||||| Sbjct: 210 cacccgcatcttcggcccctcccagaagttctcctcccgcgacctcgccgcgcacacctc 269 Query: 249 cctcaagcccagaaaagagggacaacaaactcaagaggaggtacagaagaggaatcttag 308 ||||||||| |||||||| || ||||| || ||||||||| |||||||||||||||| || Sbjct: 270 cctcaagccaagaaaagacggtcaacagacccaagaggagttacagaagaggaatctcag 329 Query: 309 ggatgaacttgaggagcgtgaacgcaagcacttctcatccaaggataagtcctatgttga 368 ||| ||||||||||| ||||| |||||||||| ||| ||||||||||||||||||| || Sbjct: 330 ggaggaacttgaggaacgtgagcgcaagcactactcttccaaggataagtcctatgccga 389 Query: 369 cgagagggaccggcgaaaaagttcaagc---ctgcttttagaaggttcaaaaaggga--- 422 || || |||||||| ||||| || ||| || || |||||||||||||| || || Sbjct: 390 agaaagagaccggcggaaaagctctagccatctactcttagaaggttcaaagagagagac 449 Query: 423 tgaagataagatagttccacgtgaaattgatgcagacgactctgacgtggagc 475 || ||||||||||||||||| ||||| ||||| || ||||| || ||||||| Sbjct: 450 agaggataagatagttccacgagaaatcgatgctgatgactccgatgtggagc 502
>dbj|AK112060.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-F11, full insert sequence Length = 538 Score = 281 bits (142), Expect = 2e-72 Identities = 297/348 (85%), Gaps = 3/348 (0%) Strand = Plus / Plus Query: 129 gatgacgacggcggcgcggcctacgtgggcgccggcgaagggcgggaacgagcagggcgg 188 |||||| |||||||||||||| || ||||| ||||| |||||||| |||||||||||||| Sbjct: 93 gatgaccacggcggcgcggccgacctgggctccggccaagggcggcaacgagcagggcgg 152 Query: 189 cacgcgcatcttcgggccctccgggaagtactcctcccgcgacctcgccgcccacacctc 248 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 153 cacccgcatcttcgggccctcgcagaagtactcctcccgcgacctcgccgcccacaccac 212 Query: 249 cctcaagcccagaaaagagggacaacaaactcaagaggaggtacagaagaggaatcttag 308 |||||||||||| ||||| |||||||| || ||||| ||| |||||||||||||||| || Sbjct: 213 cctcaagcccaggaaagaaggacaacatacccaagaagagttacagaagaggaatctcag 272 Query: 309 ggatgaacttgaggagcgtgaacgcaagcacttctcatccaaggataagtcctatgttga 368 ||| ||||||||||||||||| | ||||||| ||| || ||||| |||||||||| ||| Sbjct: 273 ggacgaacttgaggagcgtgagaggaagcactactcgtcaaaggacaagtcctatgctga 332 Query: 369 cgagagggaccggcgaaaaagttcaagcctgcttttagaaggttcaaaaag---ggatga 425 ||||| || |||| ||||| ||||||| || |||||||||||| || || ||| Sbjct: 333 ggagagagataggcggaaaagcacaagcctactcctagaaggttcaaggagagaggctga 392 Query: 426 agataagatagttccacgtgaaattgatgcagacgactctgacgtgga 473 |||||||||||||| | ||||| |||||||| || ||||| ||||| Sbjct: 393 ggataagatagttcctagagaaatcgatgcagatgattctgatgtgga 440 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 529 ctaatggcagagcttgaaaggattaaaaaagaaagagctg 568 |||||||||||||||||||| || || ||||||||||||| Sbjct: 499 ctaatggcagagcttgaaagaatcaagaaagaaagagctg 538
>gb|BT017404.1| Zea mays clone EL01N0329H05.c mRNA sequence Length = 866 Score = 278 bits (140), Expect = 4e-71 Identities = 248/284 (87%) Strand = Plus / Plus Query: 529 ctaatggcagagcttgaaaggattaaaaaagaaagagctgaggacaggcttagaaaggag 588 ||||||||||||||||| |||||||| ||||||||||| ||||| | ||||||||||||| Sbjct: 391 ctaatggcagagcttgagaggattaagaaagaaagagccgaggagaagcttagaaaggag 450 Query: 589 cgtcagcaagcagaagaagaggccaagatgaaggaggctgagctgatgcgaggaaacccg 648 || || ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 451 cggcaacaagcagaagaggaggccaagatgaaggaggctgaactgatgcggggaaacccg 510 Query: 649 ctgatcaatatgaataactccggctccttcaacgtgaagagaaggtgggatgatgatgtt 708 |||| ||||| || || | |||||||||| || |||||||||||||| || || || Sbjct: 511 gtgattaatatcaacaatgctggctccttcagtgttaagagaaggtgggacgacgacgtg 570 Query: 709 gtattcaagaaccaggctcgtggagagaccaagacaccgaaacggttcatcaacgacacc 768 ||||||||||| || || || |||||||||||||| ||||||||||||||||||||| || Sbjct: 571 gtattcaagaatcaagcacgaggagagaccaagaccccgaaacggttcatcaacgacccc 630 Query: 769 atcagaagtgatttccaccgcaagtttctgcataggtacatgaa 812 ||||| |||||||||| ||| || ||||| || ||||||||||| Sbjct: 631 atcaggagtgatttcccccgtaaatttcttcagaggtacatgaa 674 Score = 214 bits (108), Expect = 5e-52 Identities = 204/236 (86%) Strand = Plus / Plus Query: 154 tgggcgccggcgaagggcgggaacgagcagggcggcacgcgcatcttcgggccctccggg 213 ||||||||||| |||||||| ||||||||||| ||||| ||||||||| ||| | | Sbjct: 10 tgggcgccggccaagggcggcaacgagcaggggggcacccgcatcttcacccccaaccag 69 Query: 214 aagtactcctcccgcgacctcgccgcccacacctccctcaagcccagaaaagagggacaa 273 |||| |||||||||||||||||||| ||||||||||||||||| |||||||| || ||| Sbjct: 70 aagttctcctcccgcgacctcgccgggcacacctccctcaagccaagaaaagacggtcaa 129 Query: 274 caaactcaagaggaggtacagaagaggaatcttagggatgaacttgaggagcgtgaacgc 333 || || ||||||||| |||||||||||||||| ||||| ||||||||||| ||||| ||| Sbjct: 130 cagacccaagaggagttacagaagaggaatctcagggaggaacttgaggaacgtgagcgc 189 Query: 334 aagcacttctcatccaaggataagtcctatgttgacgagagggaccggcgaaaaag 389 ||||||| ||| ||||||||||||||||||| || || || |||||||| ||||| Sbjct: 190 aagcactactcttccaaggataagtcctatgccgaagaaagagaccggcggaaaag 245
>gb|AF149812.1| Oryza sativa predicted protein gene, complete cds Length = 1250 Score = 222 bits (112), Expect = 2e-54 Identities = 127/132 (96%) Strand = Plus / Minus Query: 691 aggtgggatgatgatgttgtattcaagaaccaggctcgtggagagaccaagacaccgaaa 750 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 954 aggtgggatgatgatgttgtattcaagaaccaggctcgtggagagaccaagacaccgaaa 895 Query: 751 cggttcatcaacgacaccatcagaagtgatttccaccgcaagtttctgcataggtacatg 810 || |||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 894 cgtttcatcaacgacactatcagaagtgatttccaccgtaagtttctgcagaggtacatg 835 Query: 811 aaatgatgctgc 822 || ||||||||| Sbjct: 834 aagtgatgctgc 823 Score = 79.8 bits (40), Expect = 2e-11 Identities = 70/80 (87%) Strand = Plus / Minus Query: 615 gatgaaggaggctgagctgatgcgaggaaacccgctgatcaatatgaataactccggctc 674 ||||||||| ||||| |||||||| |||||||| ||||||||||| || ||| |||| || Sbjct: 1126 gatgaaggaagctgaactgatgcggggaaaccccctgatcaatattaacaacgccggatc 1067 Query: 675 cttcaacgtgaagagaaggt 694 |||||| || |||||||||| Sbjct: 1066 cttcaatgttaagagaaggt 1047
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 222 bits (112), Expect = 2e-54 Identities = 127/132 (96%) Strand = Plus / Minus Query: 691 aggtgggatgatgatgttgtattcaagaaccaggctcgtggagagaccaagacaccgaaa 750 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 412800 aggtgggatgatgatgttgtattcaagaaccaggctcgtggagagaccaagacaccgaaa 412741 Query: 751 cggttcatcaacgacaccatcagaagtgatttccaccgcaagtttctgcataggtacatg 810 || |||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 412740 cgtttcatcaacgacactatcagaagtgatttccaccgtaagtttctgcagaggtacatg 412681 Query: 811 aaatgatgctgc 822 || ||||||||| Sbjct: 412680 aagtgatgctgc 412669 Score = 174 bits (88), Expect = 4e-40 Identities = 121/132 (91%) Strand = Plus / Minus Query: 129 gatgacgacggcggcgcggcctacgtgggcgccggcgaagggcgggaacgagcagggcgg 188 |||||| |||||||||||||| || ||||| ||||| |||||||| |||||||||||||| Sbjct: 414943 gatgaccacggcggcgcggccgacctgggctccggccaagggcggcaacgagcagggcgg 414884 Query: 189 cacgcgcatcttcgggccctccgggaagtactcctcccgcgacctcgccgcccacacctc 248 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 414883 cacccgcatcttcgggccctcgcagaagtactcctcccgcgacctcgccgcccacaccac 414824 Query: 249 cctcaagcccag 260 |||||||||||| Sbjct: 414823 cctcaagcccag 414812 Score = 103 bits (52), Expect = 1e-18 Identities = 88/100 (88%) Strand = Plus / Minus Query: 595 caagcagaagaagaggccaagatgaaggaggctgagctgatgcgaggaaacccgctgatc 654 ||||||||||| ||||| ||||||||||| ||||| |||||||| |||||||| |||||| Sbjct: 412988 caagcagaagaggaggctaagatgaaggaagctgaactgatgcggggaaaccccctgatc 412929 Query: 655 aatatgaataactccggctccttcaacgtgaagagaaggt 694 ||||| || ||| |||| |||||||| || |||||||||| Sbjct: 412928 aatattaacaacgccggatccttcaatgttaagagaaggt 412889 Score = 95.6 bits (48), Expect = 3e-16 Identities = 93/108 (86%) Strand = Plus / Minus Query: 257 ccagaaaagagggacaacaaactcaagaggaggtacagaagaggaatcttagggatgaac 316 |||| ||||| |||||||| || ||||| ||| |||||||||||||||| ||||| |||| Sbjct: 414227 ccaggaaagaaggacaacatacccaagaagagttacagaagaggaatctcagggacgaac 414168 Query: 317 ttgaggagcgtgaacgcaagcacttctcatccaaggataagtcctatg 364 ||||||||||||| | ||||||| ||| || ||||| |||||||||| Sbjct: 414167 ttgaggagcgtgagaggaagcactactcgtcaaaggacaagtcctatg 414120 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 529 ctaatggcagagcttgaaaggattaaaaaagaaagagctgaggacaggcttagaaagg 586 |||||||||||||||||||| || || |||||||||||||| || | |||||||||| Sbjct: 413160 ctaatggcagagcttgaaagaatcaagaaagaaagagctgaagaaaaccttagaaagg 413103
>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644B06 Length = 194509 Score = 222 bits (112), Expect = 2e-54 Identities = 127/132 (96%) Strand = Plus / Minus Query: 691 aggtgggatgatgatgttgtattcaagaaccaggctcgtggagagaccaagacaccgaaa 750 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122753 aggtgggatgatgatgttgtattcaagaaccaggctcgtggagagaccaagacaccgaaa 122694 Query: 751 cggttcatcaacgacaccatcagaagtgatttccaccgcaagtttctgcataggtacatg 810 || |||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 122693 cgtttcatcaacgacactatcagaagtgatttccaccgtaagtttctgcagaggtacatg 122634 Query: 811 aaatgatgctgc 822 || ||||||||| Sbjct: 122633 aagtgatgctgc 122622 Score = 174 bits (88), Expect = 4e-40 Identities = 121/132 (91%) Strand = Plus / Minus Query: 129 gatgacgacggcggcgcggcctacgtgggcgccggcgaagggcgggaacgagcagggcgg 188 |||||| |||||||||||||| || ||||| ||||| |||||||| |||||||||||||| Sbjct: 124896 gatgaccacggcggcgcggccgacctgggctccggccaagggcggcaacgagcagggcgg 124837 Query: 189 cacgcgcatcttcgggccctccgggaagtactcctcccgcgacctcgccgcccacacctc 248 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 124836 cacccgcatcttcgggccctcgcagaagtactcctcccgcgacctcgccgcccacaccac 124777 Query: 249 cctcaagcccag 260 |||||||||||| Sbjct: 124776 cctcaagcccag 124765 Score = 103 bits (52), Expect = 1e-18 Identities = 88/100 (88%) Strand = Plus / Minus Query: 595 caagcagaagaagaggccaagatgaaggaggctgagctgatgcgaggaaacccgctgatc 654 ||||||||||| ||||| ||||||||||| ||||| |||||||| |||||||| |||||| Sbjct: 122941 caagcagaagaggaggctaagatgaaggaagctgaactgatgcggggaaaccccctgatc 122882 Query: 655 aatatgaataactccggctccttcaacgtgaagagaaggt 694 ||||| || ||| |||| |||||||| || |||||||||| Sbjct: 122881 aatattaacaacgccggatccttcaatgttaagagaaggt 122842 Score = 95.6 bits (48), Expect = 3e-16 Identities = 93/108 (86%) Strand = Plus / Minus Query: 257 ccagaaaagagggacaacaaactcaagaggaggtacagaagaggaatcttagggatgaac 316 |||| ||||| |||||||| || ||||| ||| |||||||||||||||| ||||| |||| Sbjct: 124180 ccaggaaagaaggacaacatacccaagaagagttacagaagaggaatctcagggacgaac 124121 Query: 317 ttgaggagcgtgaacgcaagcacttctcatccaaggataagtcctatg 364 ||||||||||||| | ||||||| ||| || ||||| |||||||||| Sbjct: 124120 ttgaggagcgtgagaggaagcactactcgtcaaaggacaagtcctatg 124073 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 529 ctaatggcagagcttgaaaggattaaaaaagaaagagctgaggacaggcttagaaagg 586 |||||||||||||||||||| || || |||||||||||||| || | |||||||||| Sbjct: 123113 ctaatggcagagcttgaaagaatcaagaaagaaagagctgaagaaaaccttagaaagg 123056
>gb|BT017465.1| Zea mays clone EL01N0407G03.c mRNA sequence Length = 964 Score = 204 bits (103), Expect = 4e-49 Identities = 239/283 (84%), Gaps = 6/283 (2%) Strand = Plus / Plus Query: 199 ttcgggccctccgggaagtactcctcccgcgacctcgccgcccacacctccctcaagccc 258 ||||| |||||| ||||||||| ||||||||||||||||| || ||||| ||||||||| Sbjct: 114 ttcggcccctcccagaagtactcgtcccgcgacctcgccgcgcatacctcgctcaagccc 173 Query: 259 agaaaagagggacaacaaactcaagaggaggtacagaagaggaatcttagggatgaactt 318 |||||||| || ||| | || ||||||||| |||||||||||||||| ||||| |||||| Sbjct: 174 agaaaagacggtcaatagacccaagaggagttacagaagaggaatctcagggaggaactt 233 Query: 319 gaggagcgtgaacgcaagcacttctcatccaaggataagtcctatgttgacgagagggac 378 ||||| ||||| |||||||||| ||| ||||||||||||||||||| | | || || ||| Sbjct: 234 gaggaacgtgagcgcaagcactactcttccaaggataagtcctatgctaaagaaagagac 293 Query: 379 cggcgaaaaagttcaagc---ctgcttttagaaggttcaaaaag---ggatgaagataag 432 ||||| ||||| |||||| || || ||||||||||||| || || || |||||| Sbjct: 294 cggcggaaaagctcaagccagctactcctagaaggttcaaagagagaggcagaggataag 353 Query: 433 atagttccacgtgaaattgatgcagacgactctgacgtggagc 475 ||||||||| | |||||||||||||| ||||| || ||||||| Sbjct: 354 atagttccatgagaaattgatgcagatgactccgatgtggagc 396
>ref|NM_112160.2| Arabidopsis thaliana unknown protein (AT3G13200) mRNA, complete cds Length = 964 Score = 65.9 bits (33), Expect = 3e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 691 aggtgggatgatgatgttgtattcaagaaccaggctcgtgg 731 |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 682 aggtgggatgatgatgttgtattcaaaaaccaggcacgtgg 722
>gb|AF083766.1| Arabidopsis thaliana clone sps694 unknown mRNA Length = 457 Score = 65.9 bits (33), Expect = 3e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 691 aggtgggatgatgatgttgtattcaagaaccaggctcgtgg 731 |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 246 aggtgggatgatgatgttgtattcaaaaaccaggcacgtgg 206
>gb|AY072487.1| Arabidopsis thaliana unknown protein (At3g13220; MJG19.16) mRNA, complete cds Length = 773 Score = 65.9 bits (33), Expect = 3e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 691 aggtgggatgatgatgttgtattcaagaaccaggctcgtgg 731 |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 568 aggtgggatgatgatgttgtattcaaaaaccaggcacgtgg 608
>gb|AY054673.1| Arabidopsis thaliana Unknown protein (At3g13220; MJG19.16) mRNA, complete cds Length = 943 Score = 65.9 bits (33), Expect = 3e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 691 aggtgggatgatgatgttgtattcaagaaccaggctcgtgg 731 |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 677 aggtgggatgatgatgttgtattcaaaaaccaggcacgtgg 717
>gb|AY086234.1| Arabidopsis thaliana clone 22807 mRNA, complete sequence Length = 950 Score = 65.9 bits (33), Expect = 3e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 691 aggtgggatgatgatgttgtattcaagaaccaggctcgtgg 731 |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 682 aggtgggatgatgatgttgtattcaaaaaccaggcacgtgg 722
>dbj|AP000375.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MJG19 Length = 62948 Score = 65.9 bits (33), Expect = 3e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 691 aggtgggatgatgatgttgtattcaagaaccaggctcgtgg 731 |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 53217 aggtgggatgatgatgttgtattcaaaaaccaggcacgtgg 53257
>dbj|AP006399.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT22I23, TM0281a, complete sequence Length = 20838 Score = 63.9 bits (32), Expect = 1e-06 Identities = 80/96 (83%) Strand = Plus / Plus Query: 691 aggtgggatgatgatgttgtattcaagaaccaggctcgtggagagaccaagacaccgaaa 750 |||||||||||||||||||| || |||||||| || ||||| || ||||| ||| ||| Sbjct: 17725 aggtgggatgatgatgttgtgtttaagaaccaagcccgtggtgaagccaaggcactgaag 17784 Query: 751 cggttcatcaacgacaccatcagaagtgatttccac 786 || ||||| || || |||||||| | |||||||||| Sbjct: 17785 cgattcattaatgataccatcaggaatgatttccac 17820
>gb|BT013311.1| Lycopersicon esculentum clone 134984R, mRNA sequence Length = 983 Score = 61.9 bits (31), Expect = 4e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 682 gtgaagagaaggtgggatgatgatgttgtattcaagaaccaggctcg 728 |||||| ||||||||||||||||||| || ||||||||||| ||||| Sbjct: 647 gtgaagcgaaggtgggatgatgatgtagttttcaagaaccaagctcg 693
>gb|BT028296.1| Gasterosteus aculeatus clone CNB182-B02 mRNA sequence Length = 968 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 674 ccttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaa 719 ||||||| || ||||||||||||||||| |||||||| |||||||| Sbjct: 594 ccttcaaagtaaagagaaggtgggatgacgatgttgttttcaagaa 639
>ref|XM_001089958.1| PREDICTED: Macaca mulatta similar to RIKEN cDNA 0610040D20 (LOC698332), mRNA Length = 1580 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||||||||| ||||||||| Sbjct: 666 cttcaaagttaaaagaaggtgggatgatgatgttgtcttcaagaac 711
>ref|XM_533974.2| PREDICTED: Canis familiaris similar to RIKEN cDNA 0610040D20 (LOC476768), mRNA Length = 1450 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||||||||| ||||||||| Sbjct: 549 cttcaaagttaaaagaaggtgggatgatgatgttgttttcaagaac 594
>ref|XM_533756.2| PREDICTED: Canis familiaris similar to RIKEN cDNA 0610040D20 (LOC476550), mRNA Length = 1524 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||||||||| ||||||||| Sbjct: 620 cttcaaagttaaaagaaggtgggatgatgatgttgttttcaagaac 665
>emb|CR857672.1| Pongo pygmaeus mRNA; cDNA DKFZp469C0617 (from clone DKFZp469C0617) Length = 830 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||||||||| ||||||||| Sbjct: 631 cttcaaagttaaaagaaggtgggatgatgatgttgtcttcaagaac 676
>emb|BX823170.1|CNS0A5W9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB95ZA12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 879 Score = 58.0 bits (29), Expect = 6e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 691 aggtgggatgatgatgttgtattcaagaaccaggctcgtgg 731 |||||||||||||||||||||||||| | |||||| ||||| Sbjct: 661 aggtgggatgatgatgttgtattcaaaacccaggcacgtgg 701
>ref|NM_001002050.1| Danio rerio zgc:86607 (zgc:86607), mRNA gb|BC071310.1| Danio rerio zgc:86607, mRNA (cDNA clone MGC:86607 IMAGE:6892202), complete cds Length = 1077 Score = 58.0 bits (29), Expect = 6e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 676 ttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||| |||||||||||||||||||||||| ||||| || |||||| Sbjct: 747 ttcagcgtgaagagaaggtgggatgatgacgttgtgtttaagaac 791
>ref|NM_016403.2| Homo sapiens hypothetical protein HSPC148 (HSPC148), mRNA Length = 1061 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||| ||||| ||||||||| Sbjct: 629 cttcaaagttaaaagaaggtgggatgatgacgttgtcttcaagaac 674
>ref|XM_001144223.1| PREDICTED: Pan troglodytes hypothetical LOC451493, transcript variant 2 (LOC451493), mRNA Length = 1574 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||| ||||| ||||||||| Sbjct: 666 cttcaaagttaaaagaaggtgggatgatgacgttgtcttcaagaac 711
>ref|XM_508705.2| PREDICTED: Pan troglodytes hypothetical LOC451493, transcript variant 3 (LOC451493), mRNA Length = 1546 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||| ||||| ||||||||| Sbjct: 638 cttcaaagttaaaagaaggtgggatgatgacgttgtcttcaagaac 683
>ref|XM_001144067.1| PREDICTED: Pan troglodytes hypothetical LOC451493, transcript variant 1 (LOC451493), mRNA Length = 1729 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||| ||||| ||||||||| Sbjct: 821 cttcaaagttaaaagaaggtgggatgatgacgttgtcttcaagaac 866
>dbj|AK225956.1| Homo sapiens mRNA for hypothetical protein LOC51503 variant, clone: FCC114E08 Length = 841 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||| ||||| ||||||||| Sbjct: 625 cttcaaagttaaaagaaggtgggatgatgacgttgtcttcaagaac 670
>ref|XM_001063457.1| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 0610040D20 (LOC310177), mRNA Length = 809 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||||||||| || |||||| Sbjct: 614 cttcaaggttaaaagaaggtgggatgatgatgttgtttttaagaac 659
>ref|XM_226872.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 0610040D20 (LOC310177), mRNA Length = 809 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||||||||| || |||||| Sbjct: 614 cttcaaggttaaaagaaggtgggatgatgatgttgtttttaagaac 659
>gb|DQ216702.1| Taeniopygia guttata clone 0065P0010A06 RIKEN cDNA 0610040D20 variant 2-like mRNA, complete sequence Length = 1084 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Plus Query: 691 aggtgggatgatgatgttgtattcaagaac 720 |||||||||||||||||||| ||||||||| Sbjct: 625 aggtgggatgatgatgttgtcttcaagaac 654
>ref|NM_001046399.1| Bos taurus similar to RIKEN cDNA 0610040D20 (MGC128364), mRNA gb|BC105398.1| Bos taurus similar to RIKEN cDNA 0610040D20, mRNA (cDNA clone MGC:128364 IMAGE:7986525), complete cds Length = 1200 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||| ||||| ||||||||| Sbjct: 705 cttcaaagttaaaagaaggtgggatgatgacgttgttttcaagaac 750
>gb|AF161497.1|AF161497 Homo sapiens HSPC148 mRNA, complete cds Length = 1046 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||| ||||| ||||||||| Sbjct: 606 cttcaaagttaaaagaaggtgggatgatgacgttgtcttcaagaac 651
>emb|CR600216.1| full-length cDNA clone CS0CAP005YJ03 of Thymus of Homo sapiens (human) Length = 1078 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||| ||||| ||||||||| Sbjct: 914 cttcaaagttaaaagaaggtgggatgatgacgttgtcttcaagaac 959
>emb|CR599874.1| full-length cDNA clone CS0DI006YO02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1049 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||| ||||| ||||||||| Sbjct: 908 cttcaaagttaaaagaaggtgggatgatgacgttgtcttcaagaac 953
>emb|CR596277.1| full-length cDNA clone CS0DK001YP14 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 772 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||| ||||| ||||||||| Sbjct: 579 cttcaaagttaaaagaaggtgggatgatgacgttgtcttcaagaac 624
>gb|AF110775.1|AF110775 Homo sapiens adrenal gland protein AD-002 mRNA, complete cds Length = 804 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||| ||||| ||||||||| Sbjct: 606 cttcaaagttaaaagaaggtgggatgatgacgttgtcttcaagaac 651
>emb|AJ250393.1|HSA250393 Homo sapiens mRNA for chromosome 11 hypothetical protein (ORF5) Length = 839 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||| ||||| ||||||||| Sbjct: 623 cttcaaagttaaaagaaggtgggatgatgacgttgtcttcaagaac 668
>gb|AY609443.1| Sus scrofa clone Clu_11713.scr.msk.p1.Contig1, mRNA sequence Length = 1142 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||| ||||| ||||||||| Sbjct: 654 cttcaaagttaaaagaaggtgggatgatgacgttgttttcaagaac 699
>gb|BC040946.1| Homo sapiens hypothetical protein HSPC148, mRNA (cDNA clone MGC:48787 IMAGE:6067745), complete cds Length = 870 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||||||||| ||||| ||||||||| Sbjct: 618 cttcaaagttaaaagaaggtgggatgatgacgttgtcttcaagaac 663
>ref|XM_001177397.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC592411 (LOC592411), mRNA Length = 928 Score = 50.1 bits (25), Expect = 0.015 Identities = 40/45 (88%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaa 719 |||||| || || |||||||||||||||||||| || |||||||| Sbjct: 560 cttcaaggtcaaaagaaggtgggatgatgatgtggtcttcaagaa 604
>ref|XM_791937.2| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC592411 (LOC592411), mRNA Length = 704 Score = 50.1 bits (25), Expect = 0.015 Identities = 40/45 (88%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaa 719 |||||| || || |||||||||||||||||||| || |||||||| Sbjct: 560 cttcaaggtcaaaagaaggtgggatgatgatgtggtcttcaagaa 604
>gb|AY813032.1| Schistosoma japonicum SJCHGC06309 protein mRNA, complete cds Length = 959 Score = 48.1 bits (24), Expect = 0.061 Identities = 27/28 (96%) Strand = Plus / Plus Query: 689 gaaggtgggatgatgatgttgtattcaa 716 |||| ||||||||||||||||||||||| Sbjct: 762 gaagatgggatgatgatgttgtattcaa 789
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 48.1 bits (24), Expect = 0.061 Identities = 30/32 (93%) Strand = Plus / Plus Query: 134 cgacggcggcgcggcctacgtgggcgccggcg 165 |||||||||| ||||||||||| ||||||||| Sbjct: 326701 cgacggcggcacggcctacgtgcgcgccggcg 326732
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14 Length = 349305 Score = 48.1 bits (24), Expect = 0.061 Identities = 30/32 (93%) Strand = Plus / Plus Query: 134 cgacggcggcgcggcctacgtgggcgccggcg 165 |||||||||| ||||||||||| ||||||||| Sbjct: 265699 cgacggcggcacggcctacgtgcgcgccggcg 265730
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 48.1 bits (24), Expect = 0.061 Identities = 30/32 (93%) Strand = Plus / Plus Query: 134 cgacggcggcgcggcctacgtgggcgccggcg 165 |||||||||| ||||||||||| ||||||||| Sbjct: 188034 cgacggcggcacggcctacgtgcgcgccggcg 188065
>ref|XM_001218349.1| Aspergillus terreus NIH2624 conserved hypothetical protein (ATEG_09728) mRNA, complete cds Length = 669 Score = 46.1 bits (23), Expect = 0.24 Identities = 32/35 (91%) Strand = Plus / Plus Query: 694 tgggatgatgatgttgtattcaagaaccaggctcg 728 |||||||||||||| || || |||||||||||||| Sbjct: 580 tgggatgatgatgtggtgtttaagaaccaggctcg 614
>gb|DQ216701.1| Taeniopygia guttata clone 0061P0011H10 RIKEN cDNA 0610040D20 variant 2-like mRNA, complete sequence Length = 1402 Score = 44.1 bits (22), Expect = 0.95 Identities = 28/30 (93%) Strand = Plus / Plus Query: 691 aggtgggatgatgatgttgtattcaagaac 720 ||||||||||| |||||||| ||||||||| Sbjct: 583 aggtgggatgacgatgttgtcttcaagaac 612
>ref|XM_385684.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05508.1) partial mRNA Length = 714 Score = 44.1 bits (22), Expect = 0.95 Identities = 34/38 (89%) Strand = Plus / Plus Query: 694 tgggatgatgatgttgtattcaagaaccaggctcgtgg 731 ||||| |||||||| || ||||||||||| |||||||| Sbjct: 586 tgggacgatgatgtggtcttcaagaaccaagctcgtgg 623
>emb|BX934467.2| Gallus gallus finished cDNA, clone ChEST974k16 Length = 953 Score = 44.1 bits (22), Expect = 0.95 Identities = 40/46 (86%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| ||||| || || |||||||||||||| || ||||||||| Sbjct: 600 cttcaaagtgaaaaggagatgggatgatgatgtggtcttcaagaac 645
>emb|BX932596.2| Gallus gallus finished cDNA, clone ChEST120g8 Length = 1060 Score = 44.1 bits (22), Expect = 0.95 Identities = 40/46 (86%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| ||||| || || |||||||||||||| || ||||||||| Sbjct: 707 cttcaaagtgaaaaggagatgggatgatgatgtggtcttcaagaac 752
>emb|BX936078.1| Gallus gallus finished cDNA, clone ChEST489e21 Length = 972 Score = 44.1 bits (22), Expect = 0.95 Identities = 40/46 (86%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| ||||| || || |||||||||||||| || ||||||||| Sbjct: 619 cttcaaagtgaaaaggagatgggatgatgatgtggtcttcaagaac 664
>emb|BX004973.10| Mouse DNA sequence from clone RP24-260G16 on chromosome 2, complete sequence Length = 114815 Score = 44.1 bits (22), Expect = 0.95 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 agagcttgaaaggattaaaaaa 558 |||||||||||||||||||||| Sbjct: 8482 agagcttgaaaggattaaaaaa 8503
>dbj|AP002383.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-60C6, complete sequence Length = 170142 Score = 44.1 bits (22), Expect = 0.95 Identities = 28/30 (93%) Strand = Plus / Minus Query: 691 aggtgggatgatgatgttgtattcaagaac 720 |||||||||||||| ||||| ||||||||| Sbjct: 86488 aggtgggatgatgacgttgtcttcaagaac 86459
>ref|NM_001024987.1| Rattus norvegicus hypothetical LOC300361 (RGD1310669), mRNA gb|BC091396.1| Rattus norvegicus hypothetical LOC300361, mRNA (cDNA clone MGC:109502 IMAGE:7323256), complete cds Length = 1376 Score = 44.1 bits (22), Expect = 0.95 Identities = 40/46 (86%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaac 720 |||||| || || ||||||||||| ||||||||||| || |||||| Sbjct: 668 cttcaaggttaaaagaaggtgggacgatgatgttgtttttaagaac 713
>emb|AL627134.9| Mouse DNA sequence from clone RP23-71I19 on chromosome 4, complete sequence Length = 172418 Score = 44.1 bits (22), Expect = 0.95 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 gcaaaatctccctcctcctcca 33 |||||||||||||||||||||| Sbjct: 7449 gcaaaatctccctcctcctcca 7428
>ref|XM_001229498.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_02983) mRNA, complete cds Length = 801 Score = 42.1 bits (21), Expect = 3.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 685 aagagaaggtgggatgatgatgttgtattcaagaaccaggc 725 ||||| ||||||||||||||||| || || ||||| ||||| Sbjct: 664 aagaggaggtgggatgatgatgtggtgtttaagaatcaggc 704
>ref|XM_001190534.1| PREDICTED: Strongylocentrotus purpuratus similar to MGC81091 protein (LOC581697), mRNA Length = 168 Score = 42.1 bits (21), Expect = 3.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaa 719 |||||| || || ||||||||||||||||| || || |||||||| Sbjct: 24 cttcaaggtcaaaagaaggtgggatgatgacgtggtcttcaagaa 68
>emb|AM261456.1| Isoetes lacustris mitochondrial partial nad5 gene for nadh ubiquinone oxidoreductase, exons 1-4 Length = 3244 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 ccggcgaagggcgggaacgag 180 ||||||||||||||||||||| Sbjct: 1900 ccggcgaagggcgggaacgag 1920
>gb|AC188057.1| Callithrix jacchus chromosome UNK clone CH259-51H12, complete sequence Length = 180091 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 atccaaggataagtcctatgt 365 ||||||||||||||||||||| Sbjct: 46643 atccaaggataagtcctatgt 46663
>gb|DQ516895.1| Methanocaldococcus jannaschii spike-in control MJ-7000-179 genomic sequence Length = 7000 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 ttgaaaggattaaaaaagaaa 562 ||||||||||||||||||||| Sbjct: 1688 ttgaaaggattaaaaaagaaa 1708
>emb|CT033761.14| Mouse DNA sequence from clone RP23-203P12 on chromosome 9, complete sequence Length = 208050 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 tctccctcctcctccaccaac 38 ||||||||||||||||||||| Sbjct: 53673 tctccctcctcctccaccaac 53693
>gb|AC182032.3| Spermophilus tridecemlineatus clone VMRC20-712F8, complete sequence Length = 172253 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 904 cataactgtaatatctttgtt 924 ||||||||||||||||||||| Sbjct: 43644 cataactgtaatatctttgtt 43624
>gb|AC165441.3| Mus musculus BAC clone RP24-548F24 from chromosome 8, complete sequence Length = 235813 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 545 aaaggattaaaaaagaaagag 565 ||||||||||||||||||||| Sbjct: 29171 aaaggattaaaaaagaaagag 29151
>gb|AC110822.6| Mus musculus BAC clone RP24-226H7 from chromosome 9, complete sequence Length = 144131 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 tctccctcctcctccaccaac 38 ||||||||||||||||||||| Sbjct: 457 tctccctcctcctccaccaac 477
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 747 gaaacggttcatcaacgacaccatc 771 |||||| |||||||||||||||||| Sbjct: 1495822 gaaacgcttcatcaacgacaccatc 1495798
>ref|XM_781685.1| PREDICTED: Strongylocentrotus purpuratus similar to MGC81091 protein (LOC581697), mRNA Length = 168 Score = 42.1 bits (21), Expect = 3.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 675 cttcaacgtgaagagaaggtgggatgatgatgttgtattcaagaa 719 |||||| || || ||||||||||||||||| || || |||||||| Sbjct: 24 cttcaaggtcaaaagaaggtgggatgatgacgtggtcttcaagaa 68
>gb|AC104209.7| Homo sapiens chromosome 18, clone RP11-653G8, complete sequence Length = 210849 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 536 cagagcttgaaaggattaaaa 556 ||||||||||||||||||||| Sbjct: 55469 cagagcttgaaaggattaaaa 55449
>dbj|AB206998.1| Sus scrofa ASIP and AHCY genes for agouti signaling protein and S-adenosylhomocysteine hydrolase, complete cds Length = 127234 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 290 tacagaagaggaatcttagggatga 314 |||||||||||||||| |||||||| Sbjct: 96013 tacagaagaggaatctgagggatga 96037
>emb|AL139399.10| Human DNA sequence from clone RP11-574A21 on chromosome Xq21.33-22.3, complete sequence Length = 71169 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 aaactcaagaggaggtacaga 295 ||||||||||||||||||||| Sbjct: 4342 aaactcaagaggaggtacaga 4322
>emb|AL136980.5| Human DNA sequence from clone RP11-207C16 on chromosome 9p23-24.3 Contains a novel gene (contains DKFZp434D105, FLJ12580 and KIAA1432), a novel gene and the 3' end of a novel gene (FLJ23309), complete sequence Length = 169562 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 858 ggaagagcctgtgatgtttct 878 ||||||||||||||||||||| Sbjct: 148214 ggaagagcctgtgatgtttct 148194
>gb|AC010859.5| Homo sapiens chromosome , clone RP11-3D19, complete sequence Length = 171301 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 903 acataactgtaatatctttgt 923 ||||||||||||||||||||| Sbjct: 154994 acataactgtaatatctttgt 155014
>dbj|AP006278.1| Homo sapiens genomic DNA, chromosome 8q22.1, clone: KB1573B4, complete sequence Length = 157927 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 903 acataactgtaatatctttgt 923 ||||||||||||||||||||| Sbjct: 111249 acataactgtaatatctttgt 111269
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 ttgaaaggattaaaaaagaaa 562 ||||||||||||||||||||| Sbjct: 1142016 ttgaaaggattaaaaaagaaa 1142036
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 747 gaaacggttcatcaacgacaccatc 771 |||||| |||||||||||||||||| Sbjct: 1511335 gaaacgcttcatcaacgacaccatc 1511311
>gb|L76098.1|AVIDSBA Azotobacter vinelandii disulfide oxidoreductase (dsbA) gene, complete cds Length = 1029 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 669 cggctccttcaacgtgaagag 689 ||||||||||||||||||||| Sbjct: 555 cggctccttcaacgtgaagag 575
>gb|AC131232.12| Mus musculus chromosome 8, clone RP24-376E20, complete sequence Length = 158672 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 aaaggattaaaaaagaaagag 565 ||||||||||||||||||||| Sbjct: 81539 aaaggattaaaaaagaaagag 81559 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 170,623,205 Number of extensions: 10535664 Number of successful extensions: 235261 Number of sequences better than 10.0: 80 Number of HSP's gapped: 235259 Number of HSP's successfully gapped: 99 Length of query: 993 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 970 Effective length of database: 18,503,978,556 Effective search space: 17948859199320 Effective search space used: 17948859199320 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)