ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf178d07 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os10g42840:12010.t03508:unspliced-genomic NADH-ubiquinone oxidoreductase subunit B17.2, putative, expressed| Length = 2937 Score = 118 bits (252), Expect(6) = 1e-79 Identities = 41/56 (73%), Positives = 53/56 (94%) Frame = +3 / +2 Query: 390 KLLEEKTKKFIMEHRQNYTGQGDDLIYHSKGHALNPGQRDWTRYQPWEPKKEEAT* 557 +LLE+ K +I++H++N++G+G++LIYHSKGHALNPGQRDWTRYQPWEPKKEEAT* Sbjct: 2525 QLLEQNAKAYIVDHKENFSGEGEELIYHSKGHALNPGQRDWTRYQPWEPKKEEAT* 2692 Score = 99.1 bits (210), Expect(6) = 1e-79 Identities = 35/37 (94%), Positives = 36/37 (97%) Frame = +3 / +1 Query: 282 GRHRWVEYAEKGRYNASQVPAEWHGWLHHITDSTGDK 392 GRHRWVEYAEKGRYNASQVP EWHGWLHHITDSTGD+ Sbjct: 1045 GRHRWVEYAEKGRYNASQVPPEWHGWLHHITDSTGDE 1155 Score = 78.0 bits (164), Expect(6) = 1e-79 Identities = 30/31 (96%), Positives = 30/31 (96%) Frame = +3 / +2 Query: 192 QTKIHNIGATLVGVDSFGNKYYEKLHDTQYG 284 QTKIHNIGATLVGVD FGNKYYEKLHDTQYG Sbjct: 641 QTKIHNIGATLVGVDKFGNKYYEKLHDTQYG 733 Score = 58.8 bits (122), Expect(6) = 1e-79 Identities = 24/31 (77%), Positives = 28/31 (90%) Frame = +3 / +3 Query: 72 SMAAVVRSVWQGIKEKGLANFLRYARDEGYL 164 +MAAVVR V GI+EKGL+NFLR+ARDEGYL Sbjct: 102 AMAAVVRGVLNGIREKGLSNFLRHARDEGYL 194 Score = 26.3 bits (51), Expect(6) = 1e-79 Identities = 7/17 (41%), Positives = 12/17 (70%) Frame = +2 / +3 Query: 596 VSHLVWCRRSKAASQLG 646 V HL+WC + ++A +G Sbjct: 2709 VCHLIWCLKQQSAGSVG 2759 Score = 22.6 bits (43), Expect(6) = 1e-79 Identities = 6/13 (46%), Positives = 10/13 (76%) Frame = +2 / +3 Query: 158 IPKMPWGWKPIAN 196 + +MP GWKP+ + Sbjct: 483 LQQMPSGWKPLVS 521 Score = 89.5 bits (189), Expect(4) = 3e-56 Identities = 37/45 (82%), Positives = 37/45 (82%) Frame = -1 / -1 Query: 553 VASSFFGSQGWYLVQSLCPGFRACPLEW*IKSSPCPV*FCLCSIM 419 VASSFFGS GWYLVQSLCPGFRACPLEW*I SSP P F L S M Sbjct: 2688 VASSFFGSHGWYLVQSLCPGFRACPLEW*ISSSPSPEKFSL*STM 2554 Score = 83.5 bits (176), Expect(4) = 3e-56 Identities = 29/30 (96%), Positives = 29/30 (96%) Frame = -1 / -2 Query: 370 MWCSHPCHSAGTWDAL*RPFSAYSTHLCLP 281 MWCSHPCHS GTWDAL*RPFSAYSTHLCLP Sbjct: 1133 MWCSHPCHSGGTWDAL*RPFSAYSTHLCLP 1044 Score = 60.6 bits (126), Expect(4) = 3e-56 Identities = 26/31 (83%), Positives = 27/31 (87%) Frame = -1 / -1 Query: 283 PY*VSCSFS*YLFPKLSTPTRVAPML*ILVC 191 PY*VSCSFS*YL P LSTPT VAP+L ILVC Sbjct: 732 PY*VSCSFS*YLLPNLSTPTSVAPILWILVC 640 Score = 51.9 bits (107), Expect(4) = 3e-56 Identities = 21/30 (70%), Positives = 25/30 (83%) Frame = -3 / -2 Query: 161 VSLVAGVAEEVGEALLLDALPHAPNHRGHG 72 V+ VAG+AEEVGEALL DA+ HA +HR HG Sbjct: 191 VAFVAGMAEEVGEALLPDAVQHATHHRSHG 102 Score = 74.8 bits (157), Expect(4) = 3e-41 Identities = 35/52 (67%), Positives = 36/52 (69%) Frame = -2 / -2 Query: 558 IRWPLLSLVPKAGTLSSPFAQGSEHAPWSGRSSRHPVQCSSVCAP**TF*SS 403 IR PLLSLVP AGT SSPF G EHAPWSGRS HP + SS C P T * S Sbjct: 2693 IRLPLLSLVPTAGTSSSPFVLGLEHAPWSGRSVPHPRRRSSPCDPRCTL*HS 2538 Score = 67.0 bits (140), Expect(4) = 3e-41 Identities = 28/37 (75%), Positives = 30/37 (81%) Frame = -3 / -1 Query: 392 LVPSAVCNVVQPSMPFSRHLGRIVATLLCILYPPMPS 282 LVPSAV +VVQPSMPF HLG IVA LCI YPP+PS Sbjct: 1155 LVPSAVGDVVQPSMPFRGHLGCIVAPFLCIFYPPVPS 1045 Score = 48.7 bits (100), Expect(4) = 3e-41 Identities = 22/31 (70%), Positives = 25/31 (80%) Frame = -1 / -3 Query: 166 FRYPSSRA*RRKLARPFSLMPCHTLRTTAAM 74 ++ PSSRA RRKL RPFS MP +T RTTAAM Sbjct: 196 YK*PSSRAWRRKLERPFSRMPFNTPRTTAAM 104 Score = 44.1 bits (90), Expect(4) = 3e-41 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = -2 / -2 Query: 282 HTECHVVSHSTCFQNCQLLQGLHQCCEFWFA 190 HTECHVV H+ C + C LLQ + C F FA Sbjct: 731 HTECHVVFHNICCRTCLLLQVWRRYCGF*FA 639 Score = 84.0 bits (177), Expect(4) = 8e-39 Identities = 38/56 (67%), Positives = 43/56 (76%) Frame = +2 / +1 Query: 392 AAGGED*KVHYGAQTELHWTG*RLDLPLQGACSEPWAKGLDKVPALGTKERRGHLI 559 A G E * VH G+Q EL G* DLPLQGACS+P KGLD+VPA+GTKERRG+LI Sbjct: 2527 ATGAEC*SVHRGSQGELLRRG*GTDLPLQGACSKPRTKGLDEVPAVGTKERRGNLI 2694 Score = 76.7 bits (161), Expect(4) = 8e-39 Identities = 28/36 (77%), Positives = 33/36 (91%) Frame = +2 / +3 Query: 284 KA*VGRVCREGSLQCVPSAC*MAWMAAPHYRQHWGQ 391 KA VGR+CRE +LQC+PSA *MAWMAAPH+RQHWG+ Sbjct: 1047 KAQVGRICRERALQCIPSAP*MAWMAAPHHRQHWGR 1154 Score = 39.6 bits (80), Expect(4) = 8e-39 Identities = 18/31 (58%), Positives = 23/31 (74%) Frame = +2 / +1 Query: 191 ANQNSQHWCNPCRS*QFWKQVL*ETT*HSVW 283 AN N Q+ + CRS Q +Q+L*+TT*HSVW Sbjct: 640 AN*NPQYRRHTCRSRQVRQQIL*KTT*HSVW 732 Score = 26.3 bits (51), Expect(4) = 8e-39 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +2 / +2 Query: 74 HGRGGSERVAGHQGEG 121 HG GG+ RV H GEG Sbjct: 104 HGCGGAWRVERHPGEG 151 Score = 68.4 bits (143), Expect(2) = 7e-13 Identities = 28/36 (77%), Positives = 30/36 (83%) Frame = +1 / +2 Query: 283 EGIGG*SMQRRVATMRPKCLLNGMDGCTTLQTALGT 390 EG GG*+MQR+ ATM PKC LNGMDGCTT TALGT Sbjct: 1046 EGTGG*NMQRKGATMHPKCPLNGMDGCTTSPTALGT 1153 Score = 29.5 bits (58), Expect(2) = 7e-13 Identities = 16/30 (53%), Positives = 18/30 (60%) Frame = +1 / +3 Query: 193 KPKFTTLVQPL*ELTVLETSTMRNYMTLSM 282 K K T L*E T T+ M+NYMTLSM Sbjct: 642 KLKSTISAPHL*E*TSSATNIMKNYMTLSM 731 Score = 44.6 bits (91), Expect(3) = 5e-09 Identities = 19/25 (76%), Positives = 19/25 (76%) Frame = -2 / -3 Query: 357 IHAIQQALGTHCSDPSLHTLPTYAF 283 IHAIQ ALG HCS SLH LPT AF Sbjct: 1120 IHAIQGALGMHCSALSLHILPTCAF 1046 Score = 35.9 bits (72), Expect(3) = 5e-09 Identities = 16/31 (51%), Positives = 23/31 (74%) Frame = -3 / -3 Query: 284 SILSVM*FLIVLVSKTVNSYKGCTNVVNFGL 192 +ILSVM*F I+ V++ V SYK ++V+F L Sbjct: 733 TILSVM*FFIIFVAELVYSYKCGADIVDFSL 641 Score = 24.0 bits (46), Expect(3) = 5e-09 Identities = 6/12 (50%), Positives = 10/12 (83%) Frame = -2 / -1 Query: 102 ATRSEPPRPWMI 67 +TR PP+PW++ Sbjct: 132 STRHAPPQPWLL 97
>LOC_Os02g09430:12002.t00790:unspliced-genomic exostosin-like, putative, expressed| Length = 3414 Score = 29.5 bits (58), Expect(2) = 0.29 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +2 / -2 Query: 77 GRGGSERVAGHQGEG 121 GRGG+ER G +GEG Sbjct: 215 GRGGAERAEGEEGEG 171 Score = 24.0 bits (46), Expect(2) = 0.29 Identities = 10/17 (58%), Positives = 10/17 (58%) Frame = +3 / -2 Query: 3 GGVASHRPLRGIRGGAA 53 GGV RP G R GAA Sbjct: 284 GGVVHRRPREGGRAGAA 234
>LOC_Os06g03150:12006.t00208:unspliced-genomic expressed protein| Length = 2671 Score = 34.5 bits (69), Expect = 0.91 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +2 / +3 Query: 38 QRGSGAGSEGIIHGRGGSERVAGHQGEG 121 ++ + AG++G+ GRG R G GEG Sbjct: 2253 EQAAAAGNDGVAEGRGAGARAGGESGEG 2336
>LOC_Os11g08314:12011.t00722:unspliced-genomic ankyrin-like protein, putative, expressed| Length = 7163 Score = 34.1 bits (68), Expect = 1.3 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = +2 / +1 Query: 2 GGRRVASAIERNQRGSGAGSEGIIHGRGGSERVAGH 109 GGRR A ER +R G EG R G +R GH Sbjct: 826 GGRRARQAGERRRRRGGLRREGDRQPRAGGDRHEGH 933
>LOC_Os03g59480:12003.t05195:unspliced-genomic expressed protein| Length = 4757 Score = 34.1 bits (68), Expect = 1.3 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = +2 / -1 Query: 5 GRRVASAIERNQRGSGAGSEGIIHGRGGSERVAGHQGEG 121 G ASA G G G EG++ G G RV+ G G Sbjct: 275 GEGAASAAASASSGGGGGGEGLVGGEGN*ARVSSSNGGG 159
>LOC_Os02g24430:12002.t02140:unspliced-genomic phosphatidylinositol transporter/ transporter, putative, expressed| Length = 10464 Score = 29.5 bits (58), Expect(2) = 1.4 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = -1 / +1 Query: 82 AAMDDTFASCAAPPLIPLNGRCDAT 8 A T +SC PPL PL R DAT Sbjct: 6304 ATAPSTASSCPPPPL*PLPHRADAT 6378 Score = 27.6 bits (54), Expect(2) = 1.4 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = -3 / +1 Query: 269 M*FLIVLVSKTVNSYKGCTNVVNF 198 +*FL+VL+ V +Y GC N N+ Sbjct: 436 I*FLMVLIVLHVMTYNGCKNYSNY 507
>LOC_Os01g03770:12001.t00267:unspliced-genomic hypothetical protein| Length = 1503 Score = 33.6 bits (67), Expect = 1.7 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = +2 / +3 Query: 8 RRVASAIERNQRGSGAGSEGIIHGRGGSERVAGHQGE 118 RR A+ + RGSGA G + RGGS R A GE Sbjct: 204 RRRAARRDARGRGSGARGSGEVTARGGSRREARAGGE 314
>LOC_Os06g36210:12006.t03317:unspliced-genomic amino acid permease 1, putative, expressed| Length = 6180 Score = 26.7 bits (52), Expect(2) = 2.2 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -2 / -2 Query: 531 PKAGTLSSPFAQGSEHAPWSGRS 463 P++ T SSP ++ + PWS RS Sbjct: 4934 PRSRTPSSPGSRTAGRTPWSSRS 4866 Score = 23.5 bits (45), Expect(2) = 2.2 Identities = 7/17 (41%), Positives = 9/17 (52%) Frame = -2 / -2 Query: 480 PWSGRSSRHPVQCSSVC 430 PW SSR P ++ C Sbjct: 4859 PWRAASSRSPAAATAAC 4809
>LOC_Os08g29580:12008.t02713:unspliced-genomic hypothetical protein| Length = 908 Score = 33.1 bits (66), Expect = 2.4 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = +2 / +3 Query: 50 GAGSEGIIHGRGGSERVAGHQGEG 121 G G EG GRGGS R +GEG Sbjct: 219 GGGGEGSCRGRGGSRRSGSGRGEG 290
>LOC_Os07g44299:12007.t04070:unspliced-genomic hypothetical protein| Length = 1824 Score = 33.1 bits (66), Expect = 2.4 Identities = 15/59 (25%), Positives = 25/59 (42%) Frame = -2 / +3 Query: 339 ALGTHCSDPSLHTLPTYAFHTECHVVSHSTCFQNCQLLQGLHQCCEFWFAIGFHPQGIL 163 +L + + PSL T + H++CH H+ + CQ CC + H + L Sbjct: 903 SLNSKFAHPSLAFCRTLSVHSQCHHTWHTCRSEQCQASSPALSCCSPRSGVPLHQRPAL 1079
>LOC_Os04g59020:12004.t05361:unspliced-genomic integral membrane protein, expressed| Length = 1048 Score = 33.1 bits (66), Expect = 2.4 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2 / +2 Query: 2 GGRRVASAIERNQRGSGAGSEGIIHGRGGSERVA 103 GG R A + RG+GAG G + GG+ VA Sbjct: 530 GGERGAGGVRVRGRGAGAGGGGAVEREGGARWVA 631
>LOC_Os03g06360:12003.t00505:unspliced-genomic late embryogenesis abundant protein D-34, putative, expressed| Length = 1446 Score = 33.1 bits (66), Expect = 2.4 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +2 / +2 Query: 29 ERNQRGSGAGSEGIIHGRGGSERVAGHQG 115 + N+RG+G G G GG++R GH G Sbjct: 605 DNNRRGAGGGGAGGRRDAGGTQRRGGHSG 691
>LOC_Os05g30454:12005.t02644:unspliced-genomic thiamin pyrophosphokinase 1, putative, expressed| Length = 4813 Score = 32.7 bits (65), Expect = 3.2 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +3 / -3 Query: 78 AAVVRSVWQGIKEKGLANFLRYARDEGYLKCLGDGNLLQTK 200 AAV R +WQ I + RY E Y++ +GDG +L K Sbjct: 4088 AAVKRQIWQ*IL*RWWVMTPRYRA*EVYIRFVGDGRILSDK 3966
>LOC_Os09g28370:12009.t02515:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 12702 Score = 32.7 bits (65), Expect = 3.2 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -2 / +3 Query: 315 PSLHTLPTYAFHTECHVVSHSTCFQNCQL 229 PSL L +AF C+ + +S C NC L Sbjct: 630 PSLQLLTVFAFFKTCYYLCYSLCMFNCVL 716
>LOC_Os07g07310:12007.t00609:unspliced-genomic polynucleotide phosphorylase, putative, expressed| Length = 11064 Score = 32.7 bits (65), Expect = 3.2 Identities = 16/35 (45%), Positives = 16/35 (45%) Frame = +2 / -1 Query: 2 GGRRVASAIERNQRGSGAGSEGIIHGRGGSERVAG 106 GGRRVA A G G G RGG E AG Sbjct: 138 GGRRVACAAAAGGGGGGGARRGSRASRGGGEAEAG 34
>LOC_Os01g61400:12001.t05519:unspliced-genomic expressed protein| Length = 3056 Score = 32.7 bits (65), Expect = 3.2 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = +2 / -2 Query: 164 KMPWGWKPIANQNSQHWCNP 223 + PWGW+ NQ H C P Sbjct: 334 RAPWGWRRTRNQTRTHTCTP 275
>LOC_Os10g24310:12010.t01856:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 8957 Score = 28.6 bits (56), Expect(2) = 4.0 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2 / +1 Query: 5 GRRVASAIERNQRGSGAGSEGIIHGRGGSERVAG 106 G ASA+ R + G G +G+ G S RVAG Sbjct: 7336 GFAAASALGRGRGGGSGGRKGMTGGPHPSARVAG 7437 Score = 26.7 bits (52), Expect(2) = 4.0 Identities = 7/18 (38%), Positives = 13/18 (72%) Frame = +1 / +3 Query: 673 LYLILNTCHRTILISVWM 726 LY ++N C +++SVW+ Sbjct: 8181 LYFLMNQCALMVVVSVWL 8234
>LOC_Os03g50120:12003.t04356:unspliced-genomic expressed protein| Length = 5066 Score = 27.2 bits (53), Expect(3) = 4.1 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +3 / +2 Query: 120 GLANFLRYARDEGYLKCLGDG 182 G NFL +AR+ L+C DG Sbjct: 4091 GSCNFLNFARNRHCLECKADG 4153 Score = 23.5 bits (45), Expect(3) = 4.1 Identities = 6/10 (60%), Positives = 9/10 (90%) Frame = +3 / +1 Query: 267 HDTQYGRHRW 296 HD+Q+G +RW Sbjct: 4549 HDSQHGHNRW 4578 Score = 23.1 bits (44), Expect(3) = 4.1 Identities = 5/6 (83%), Positives = 5/6 (83%) Frame = +1 / +3 Query: 70 HPWPRW 87 HPWP W Sbjct: 228 HPWPEW 245
>LOC_Os08g44780:12008.t04201:unspliced-genomic expressed protein| Length = 1700 Score = 29.9 bits (59), Expect(2) = 4.1 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +2 / +3 Query: 5 GRRVASAIERNQRGSGAGSEGIIHGRGGS 91 GRR + G G+EG+ HGRG S Sbjct: 228 GRRPWQLVALGGGGVAGGAEGVAHGRGSS 314 Score = 23.1 bits (44), Expect(2) = 4.1 Identities = 10/30 (33%), Positives = 14/30 (46%) Frame = +1 / +2 Query: 337 CLLNGMDGCTTLQTALGTSCWRRRLKSSLW 426 CL+ DG + G W+RR + LW Sbjct: 614 CLVADGDGTAVVCGGGGCRRWQRRRRP*LW 703
>LOC_Os05g17110:12005.t01480:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5197 Score = 27.2 bits (53), Expect(2) = 4.4 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = +2 / +2 Query: 29 ERNQRGSGAGSEGIIHGRGGSERVAGHQGEG 121 + Q G G +G RGG R G +GEG Sbjct: 1013 KERQPGRERGGKGSWAERGGGPRERGREGEG 1105 Score = 27.2 bits (53), Expect(2) = 4.4 Identities = 8/15 (53%), Positives = 9/15 (60%) Frame = +3 / +3 Query: 495 PGQRDWTRYQPWEPK 539 PG R W R PW P+ Sbjct: 1485 PGARGWRRSAPWVPR 1529
>LOC_Os08g29720:12008.t02725:unspliced-genomic mitochondrial carrier protein CGI-69, putative, expressed| Length = 5569 Score = 32.2 bits (64), Expect = 4.4 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -3 / +2 Query: 101 PHAPNHRGHG*YLRFLRRSPSDSSQWPMRRDAP 3 PH+P+ RG L R P+ SS WP R P Sbjct: 311 PHSPDTRGRISRLGLRGRPPTRSSGWPSARSPP 409
>LOC_Os08g08090:12008.t00695:unspliced-genomic wound induced protein, putative, expressed| Length = 505 Score = 32.2 bits (64), Expect = 4.5 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = +2 / +1 Query: 11 RVASAIERNQRGSGAGSEGIIHGRGGSERVAGHQG 115 R A I +RG G G EG++ G R G QG Sbjct: 91 REALQISNGERGGGGGGEGVVDGGDERGRGGGAQG 195
>LOC_Os06g22310:12006.t02045:unspliced-genomic hypothetical protein| Length = 1570 Score = 32.2 bits (64), Expect = 4.5 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = -2 / +2 Query: 495 GSEHAPWSGRSSRHPVQC 442 G+ H W GR RHP QC Sbjct: 1058 GAWHGSWLGRRERHPAQC 1111
>LOC_Os04g27520:12004.t02455:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6093 Score = 32.2 bits (64), Expect = 4.5 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = +2 / +1 Query: 41 RGSGAGSEGIIHGRGGSERVAGHQG 115 RG GA S G+IH RG VAG G Sbjct: 2578 RGGGATSGGLIHPRGHPSGVAGEPG 2652
>LOC_Os02g28720:12002.t02566:unspliced-genomic spotted leaf protein 11, putative, expressed| Length = 4167 Score = 32.2 bits (64), Expect = 4.5 Identities = 12/16 (75%), Positives = 13/16 (81%) Frame = +2 / -2 Query: 74 HGRGGSERVAGHQGEG 121 HGRGG RVAG +GEG Sbjct: 113 HGRGGRLRVAGRRGEG 66
>LOC_Os05g38620:12005.t03404:unspliced-genomic zinc finger, C2H2 type family protein| Length = 621 Score = 29.0 bits (57), Expect(2) = 5.4 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = -2 / -2 Query: 525 AGTLSSPFAQGSEHAPWSGR 466 A T SSP +G+ APW GR Sbjct: 251 APTSSSPAGRGARSAPWRGR 192 Score = 22.1 bits (42), Expect(2) = 5.4 Identities = 12/36 (33%), Positives = 15/36 (41%) Frame = -1 / -3 Query: 763 KQTATIASFSIATSRQRLKLFGGRCSVSDIVHYSGP 656 K + SF +SR+R G C S SGP Sbjct: 619 KGDGPVVSFFAQSSRRRRAGRAGTCRSSPTASGSGP 512
>LOC_Os06g35510:12006.t03248:unspliced-genomic conserved hypothetical protein| Length = 858 Score = 28.1 bits (55), Expect(2) = 5.4 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +2 / -2 Query: 11 RVASAIERNQRGSGAGSEGIIHGRGGSERVAGHQGEG 121 R+ A +GSG G I GGS RVA G+G Sbjct: 848 RLVRAAGGAAQGSGDGDRQIRAASGGSGRVAAGGGDG 738 Score = 23.5 bits (45), Expect(2) = 5.4 Identities = 10/30 (33%), Positives = 15/30 (50%) Frame = +1 / -2 Query: 337 CLLNGMDGCTTLQTALGTSCWRRRLKSSLW 426 CL+ DG + G+ W+RR + LW Sbjct: 275 CLVVEGDGAAAVCGGGGSRRWQRRWRP*LW 186
>LOC_Os04g02850:12004.t00179:unspliced-genomic expressed protein| Length = 2424 Score = 28.1 bits (55), Expect(2) = 5.6 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = -2 / -3 Query: 483 APWSGRSSRHPVQCSSVCAP 424 APW G ++ H C S C P Sbjct: 1687 APWRGTAAAHGPPCRSGCTP 1628 Score = 24.9 bits (48), Expect(2) = 5.6 Identities = 17/52 (32%), Positives = 22/52 (42%) Frame = -1 / -3 Query: 157 PSSRA*RRKLARPFSLMPCHTLRTTAAMDDTFASCAAPPLIPLNGRCDATPP 2 P RA R ARP + RT AA ++ A +P + R D PP Sbjct: 1084 PPCRASPRTRARPPCRRTPRSARTPAARWPWWSRRARSRPLPPSARTDEAPP 929
>LOC_Os10g25380:12010.t01958:unspliced-genomic esterase precursor, putative| Length = 4320 Score = 31.8 bits (63), Expect = 6.1 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = -3 / +3 Query: 401 LQQLVPSAVCNVVQPSMPFSRHLGRIVATLLCILYPPMPSILS 273 LQ+ +PS + N+ P + F H +I T+ L +PS+ S Sbjct: 2721 LQEKIPSLLHNIFLPPLSFPSHHIKIFPTISLFLSSTLPSLSS 2849
>LOC_Os07g02490:12007.t00140:unspliced-genomic retrotransposon protein, putative, LINE subclass| Length = 6589 Score = 31.8 bits (63), Expect = 6.1 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +3 / -3 Query: 489 LNPGQRDWTRYQPWEPKK 542 LN G WTR+Q WEP + Sbjct: 1355 LNGGPHSWTRWQHWEPHR 1302
>LOC_Os05g29800:12005.t02580:unspliced-genomic conserved hypothetical protein| Length = 1373 Score = 31.8 bits (63), Expect = 6.1 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = -3 / -3 Query: 137 EEVGEALLLDALPHAPNHRGH 75 E G+ LLL L HAP HR H Sbjct: 309 EHAGDELLLPPLDHAPRHRRH 247
>LOC_Os04g47059:12004.t04234:unspliced-genomic TRANSPARENT TESTA 8 protein, putative, expressed| Length = 24227 Score = 31.8 bits (63), Expect = 6.1 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +3 / -1 Query: 489 LNPGQRDWTRYQPWEPKK 542 LN G WTR+Q WEP + Sbjct: 1184 LNGGPHSWTRWQHWEPHR 1131
>LOC_Os03g07739:12003.t005755:unspliced-genomic expressed protein| Length = 6043 Score = 31.8 bits (63), Expect = 6.1 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -3 / +2 Query: 401 LQQLVPSAVCNVVQPSMPFSRHLGRIVATLLCILY 297 L QL P A+CN + PS P G+ + LC ++ Sbjct: 3707 LYQLQPVALCNFISPSSPLFF*HGQFLKNGLCFMF 3811
>LOC_Os11g14370:12011.t01268:unspliced-genomic hypothetical protein| Length = 2002 Score = 31.8 bits (63), Expect = 6.1 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = -1 / -1 Query: 199 LVCNRFPSPRHFRYPSSRA*RRKLARPFSLMPCH 98 L+C+R PSP R S RR++ P S CH Sbjct: 187 LLCSRSPSPIASRRAESHRRRRRVRHPASRRVCH 86
>LOC_Os10g33970:12010.t02699:unspliced-genomic double-stranded RNA binding motif family protein, expressed| Length = 6191 Score = 31.8 bits (63), Expect = 6.1 Identities = 12/36 (33%), Positives = 17/36 (47%) Frame = -1 / +2 Query: 109 MPCHTLRTTAAMDDTFASCAAPPLIPLNGRCDATPP 2 MPCH++ + + +APPL P R PP Sbjct: 4898 MPCHSMAPPVTVRTSIPVFSAPPLPPPGARTQQLPP 5005
>LOC_Os09g27100:12009.t02389:unspliced-genomic F-box domain containing protein| Length = 2466 Score = 31.8 bits (63), Expect = 6.1 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = +2 / +2 Query: 161 PKMPWGWKPIANQNSQHWCNPC 226 P P GW+P + S W +PC Sbjct: 299 PACPPGWRPSPRRGSSRWTSPC 364
>LOC_Os09g02770:12009.t00176:unspliced-genomic PE-PGRS family protein, putative, expressed| Length = 1236 Score = 31.8 bits (63), Expect = 6.1 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +2 / -2 Query: 56 GSEGIIHGRGGSERVAGHQGEG 121 G G+ RGG ERVAG +GEG Sbjct: 644 GLAGVEAARGGGERVAGVRGEG 579
>LOC_Os06g38210:12006.t04872:unspliced-genomic expressed protein| Length = 3519 Score = 31.8 bits (63), Expect = 6.1 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +2 / +1 Query: 2 GGRRVASAIERNQRGSGAGSEGIIHGRGGSERVAGHQGEG 121 GG V S R++ + G G+++ RGG V G +G+G Sbjct: 1831 GGYSVGSENRRSRWRATRGGCGVLNARGGGRGVIGCRGQG 1950
>LOC_Os06g02970:12006.t00190:unspliced-genomic conserved hypothetical protein| Length = 588 Score = 31.8 bits (63), Expect = 6.1 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = +2 / +1 Query: 2 GGRRVASAIERNQRGSGAGSEGIIHGRGGSERVAGHQGEG 121 GGR R RG G G+ HGR G G +G+G Sbjct: 82 GGRGRGGRGGRGGRGGAGGRLGVRHGRRGRRGGGGARGQG 201
>LOC_Os05g40770:12005.t03616:unspliced-genomic protein kinase, putative, expressed| Length = 6142 Score = 31.8 bits (63), Expect = 6.1 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = -2 / +1 Query: 492 SEHAPWSGRSSRHPVQ 445 +E APW GRS RHP+Q Sbjct: 3406 AEPAPWLGRSLRHPLQ 3453
>LOC_Os02g57830:12002.t05354:unspliced-genomic expressed protein| Length = 2273 Score = 31.8 bits (63), Expect = 6.1 Identities = 9/26 (34%), Positives = 17/26 (65%) Frame = -2 / -2 Query: 264 VSHSTCFQNCQLLQGLHQCCEFWFAI 187 +SH++C+ + GLH+C +FW + Sbjct: 955 ISHASCYVSKGKQAGLHRC*DFWIPV 878
>LOC_Os12g33580:12012.t03047:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1648 Score = 30.4 bits (60), Expect(2) = 7.2 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -2 / -1 Query: 354 HAIQQALGTHCSDPSLHTLP 295 +AI QAL THCS SL+ +P Sbjct: 1024 NAILQALATHCSQMSLYYVP 965 Score = 21.7 bits (41), Expect(2) = 7.2 Identities = 7/13 (53%), Positives = 9/13 (69%) Frame = -1 / -3 Query: 79 AMDDTFASCAAPP 41 A D+ ASC+ PP Sbjct: 275 AHDEALASCSPPP 237
>LOC_Os08g25900:12008.t02356:unspliced-genomic chloroplast oxygen-evolving complex/thylakoid lumenal 25.6kDa| protein, putative, expressed Length = 4704 Score = 29.9 bits (59), Expect(2) = 7.3 Identities = 9/28 (32%), Positives = 16/28 (57%) Frame = +3 / -3 Query: 471 HSKGHALNPGQRDWTRYQPWEPKKEEAT 554 H+ A +P +R W +PW+ ++ AT Sbjct: 328 HTAPSASSPAERTWAGMRPWKERRPAAT 245 Score = 23.5 bits (45), Expect(2) = 7.3 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = +2 / -3 Query: 41 RGSGAGSEGIIHGRGGSERVAGHQGE 118 RGSG G R G V GH+G+ Sbjct: 1012 RGSGERESGGGRRRRGRGGVGGHRGQ 935
>LOC_Os01g35390:12001.t03092:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3733 Score = 24.4 bits (47), Expect(2) = 7.5 Identities = 8/18 (44%), Positives = 9/18 (50%) Frame = -2 / -3 Query: 258 HSTCFQNCQLLQGLHQCC 205 H TCF C L + CC Sbjct: 2312 HRTCFPICVPLADMPSCC 2259 Score = 24.0 bits (46), Expect(2) = 7.5 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = -3 / -3 Query: 311 LCILYPPMPSILS 273 LC+ YPP+ S LS Sbjct: 2480 LCLEYPPLESFLS 2442
>LOC_Os09g21280:12009.t01862:unspliced-genomic hypothetical protein| Length = 2650 Score = 28.6 bits (56), Expect(2) = 8.0 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = +1 / +2 Query: 76 WPRWFGACG 102 WPRW+G CG Sbjct: 2 WPRWWGGCG 28 Score = 24.0 bits (46), Expect(2) = 8.0 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +3 / +2 Query: 168 CLGDGNLLQTKIHNIGATLVGV 233 C+G+G K HN+ A LV + Sbjct: 2582 CVGEGFPTPPKEHNLSAALVAL 2647
>LOC_Os03g60800:12003.t05317:unspliced-genomic transposon protein, putative, unclassified, expressed| Length = 3792 Score = 30.4 bits (60), Expect(2) = 8.2 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +2 / +1 Query: 32 RNQRGSGAGSEGIIHGRGGSERVAGHQGEG 121 R RG+G+ S G++ G ERV G+G Sbjct: 475 RQWRGNGSNSVGVVMGIAMQERVVARGGDG 564 Score = 22.6 bits (43), Expect(2) = 8.2 Identities = 8/26 (30%), Positives = 16/26 (61%) Frame = +1 / +2 Query: 646 FHGLDLNNVLYLILNTCHRTILISVW 723 +H L + N+L ++L + ++ SVW Sbjct: 3473 WHCLSVVNILQVVLFSSATNLMSSVW 3550
>LOC_Os12g43760:12012.t04044:unspliced-genomic transposon protein, putative, unclassified| Length = 2121 Score = 31.3 bits (62), Expect = 8.4 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = +3 / -1 Query: 483 HALNPGQRDWTRYQPWEPKKEEAT*SDL 566 H +NP R WTR P+ P + S++ Sbjct: 123 HVVNPATRQWTRLLPYSPPESSPPGSEI 40
>LOC_Os12g40860:12012.t03764:unspliced-genomic Leucine Rich Repeat family protein, expressed| Length = 4588 Score = 31.3 bits (62), Expect = 8.4 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +2 / +3 Query: 26 IERNQRGSGAGSEGIIHGRGGSERVAGHQGEG 121 + R + G+ A EG RGG AG +GEG Sbjct: 111 LRRRRGGAEAAEEGAALRRGGPAAAAGEEGEG 206
>LOC_Os10g24620:12010.t01887:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 5936 Score = 31.3 bits (62), Expect = 8.4 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +2 / -2 Query: 17 ASAIERNQRGSGAGSEGIIHGRGGSERVAGHQG 115 A A ER G+GAG+ G G GG+ VA G Sbjct: 940 AGAKERADSGAGAGAAGTAGGTGGAAGVAAGGG 842
>LOC_Os10g05430:12010.t00420:unspliced-genomic hypothetical protein| Length = 1968 Score = 31.3 bits (62), Expect = 8.4 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = +2 / +3 Query: 44 GSGAGSEGIIHGRGGSERVAGHQGEG 121 GSGAG E R G E G QG+G Sbjct: 258 GSGAGREAATRWRAGRETARGAQGDG 335
>LOC_Os09g32190:12009.t02835:unspliced-genomic expressed protein| Length = 2736 Score = 31.3 bits (62), Expect = 8.4 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = +1 / +1 Query: 646 FHGLDLNNVLYLILNTCHRTILISVWMWQ 732 FH L +NN+ + N H ++ W WQ Sbjct: 790 FHSLGMNNLHASLFNGTHMSVYSGSWWWQ 876
>LOC_Os09g26460:12009.t02325:unspliced-genomic ubiquitin-protein ligase/ zinc ion binding protein, putative,| expressed Length = 6733 Score = 31.3 bits (62), Expect = 8.4 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = -1 / -1 Query: 136 RKLARPFSLMPCHTLRTTAAMDDTFASCAAPPLIPL 29 R SL CH L +D A+ AAPPL PL Sbjct: 1147 RSSGESMSLPACHALAPIDLVDHGAAAGAAPPLAPL 1040
>LOC_Os09g08440:12009.t00638:unspliced-genomic mtN3/saliva family protein| Length = 6400 Score = 31.3 bits (62), Expect = 8.4 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +2 / +3 Query: 29 ERNQRGSGAGSEGIIHGRGGSERVAG 106 E+ + GSGA G +HG GG+ R G Sbjct: 291 EQKEDGSGARYRGSLHGGGGARRAFG 368
>LOC_Os09g07980:12009.t00594:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 4994 Score = 31.3 bits (62), Expect = 8.4 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +2 / -2 Query: 29 ERNQRGSGAGSEGIIHGRGGSERVAG 106 E + GSGA G +HG GGS R G Sbjct: 478 EEQEDGSGARYGGSLHGGGGSRRAFG 401
>LOC_Os08g43060:12008.t04269:unspliced-genomic expressed protein| Length = 6709 Score = 31.3 bits (62), Expect = 8.4 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = -2 / -2 Query: 492 SEHAPWSGRSSRHPVQC 442 +EH P+ G+SS+HPV C Sbjct: 1725 TEH*PFDGQSSKHPVPC 1675
>LOC_Os07g39460:12007.t03607:unspliced-genomic expressed protein| Length = 9323 Score = 31.3 bits (62), Expect = 8.4 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +2 / -1 Query: 485 CSEPWAKGLDKVPALGTKERRGHL 556 C+ PW +G+D +PA K R+G + Sbjct: 3767 CASPWMRGIDLLPAK*MKIRKGRV 3696
>LOC_Os07g06700:12007.t00549:unspliced-genomic hypothetical protein| Length = 1123 Score = 31.3 bits (62), Expect = 8.4 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +2 / +2 Query: 44 GSGAGSEGIIHGRGGSERVAGHQGEG 121 G+G G G+ G+GG+ R G G+G Sbjct: 167 GAGEGGGGVGGGQGGARRAGGRVGQG 244
>LOC_Os05g43252:12005.t03816:unspliced-genomic expressed protein| Length = 4983 Score = 31.3 bits (62), Expect = 8.4 Identities = 21/59 (35%), Positives = 25/59 (42%) Frame = -1 / -3 Query: 181 PSPRHFRYPSSRA*RRKLARPFSLMPCHTLRTTAAMDDTFASCAAPPLIPLNGRCDATP 5 PS +R P SRA RR RP S R+ + S AAPP RC + P Sbjct: 4618 PSR*RWRCPPSRARRRAAPRPRSPAASGARRSPSCSRPGGPSPAAPPCRTSAPRCSSGP 4442
>LOC_Os05g06560:12005.t00546:unspliced-genomic hypothetical protein| Length = 1544 Score = 31.3 bits (62), Expect = 8.4 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -2 / +2 Query: 231 LLQGLHQCCEFWFAIGF 181 LL GL C EFWFAI F Sbjct: 140 LLVGLFVCFEFWFAISF 190
>LOC_Os04g58630:12004.t05434:unspliced-genomic DNA mismatch repair protein MSH3, putative, expressed| Length = 7176 Score = 31.3 bits (62), Expect = 8.4 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +2 / -3 Query: 11 RVASAIERNQRGSGAGSEGIIHGRGGSERVAGHQGEG 121 R A E+ + GS G + G GGS VAG +G G Sbjct: 298 RARLAGEKETTAATGGSAGGLGGGGGSSAVAGAEGRG 188
>LOC_Os03g17370:12003.t01514:unspliced-genomic ATPase, coupled to transmembrane movement of substances, putative| Length = 2298 Score = 31.3 bits (62), Expect = 8.4 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +2 / +3 Query: 44 GSGAGSEGIIHGRGGSERVAGHQGEG 121 G GAG + +HG G +R+ H G G Sbjct: 2088 GEGAGGDEQVHGVGTEQRLVHHDGAG 2165
>LOC_Os02g19170:12002.t01710:unspliced-genomic expressed protein| Length = 3076 Score = 31.3 bits (62), Expect = 8.4 Identities = 15/33 (45%), Positives = 16/33 (48%) Frame = +2 / -1 Query: 5 GRRVASAIERNQRGSGAGSEGIIHGRGGSERVA 103 GRR A R QR +GAG G R G R A Sbjct: 538 GRRPCGAGSRRQRAAGAGGRGGSRRRAGGSRPA 440
>LOC_Os01g52480:12001.t04675:unspliced-genomic senescence-associated protein 12, putative, expressed| Length = 2101 Score = 31.3 bits (62), Expect = 8.4 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +2 / -3 Query: 494 PWAKGLDKVPALGTKERRGH 553 PW G + +P L TK+RRGH Sbjct: 1136 PWDGGEEGLPLLRTKQRRGH 1077
>LOC_Os02g03670:12002.t00267:unspliced-genomic expressed protein| Length = 4123 Score = 26.7 bits (52), Expect(2) = 8.8 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = -1 / +2 Query: 175 PRHFRYPSSRA*RRKLARPFSLMPC 101 PR RA*RR RP L+PC Sbjct: 3722 PRQCPQEGYRA*RRSRCRPSVLLPC 3796 Score = 26.3 bits (51), Expect(2) = 8.8 Identities = 8/23 (34%), Positives = 11/23 (47%) Frame = -2 / +3 Query: 273 CHVVSHSTCFQNCQLLQGLHQCC 205 CH H CF C L+ ++ C Sbjct: 2772 CHHRQHGYCFLICNALKQIYSAC 2840
>LOC_Os04g59260:12004.t05384:unspliced-genomic peroxidase 12 precursor, putative, expressed| Length = 1632 Score = 29.0 bits (57), Expect(2) = 9.6 Identities = 11/32 (34%), Positives = 15/32 (46%) Frame = -2 / +3 Query: 552 WPLLSLVPKAGTLSSPFAQGSEHAPWSGRSSR 457 WP S P + + SSP Q + PW+ R Sbjct: 90 WPSWSSSPSSPSSSSPHQQQQQSCPWTSTRRR 185 Score = 22.6 bits (43), Expect(2) = 9.6 Identities = 8/22 (36%), Positives = 13/22 (59%) Frame = -1 / +3 Query: 67 TFASCAAPPLIPLNGRCDATPP 2 +++ APP PL+ R +PP Sbjct: 192 SWSPSCAPPCKPLSSRRSPSPP 257
>LOC_Os06g31000:12006.t02802:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 9321 Score = 28.6 bits (56), Expect(2) = 9.7 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = +2 / +2 Query: 8 RRVASAIERNQRGSGAGSEGIIHGRGGSERVAGHQG 115 RR A ER+ R SEG GRGG + A G Sbjct: 6074 RRAAETEERSTRDDFIASEGREGGRGGRKPAAEFSG 6181 Score = 25.4 bits (49), Expect(2) = 9.7 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = +3 / +2 Query: 468 YHSKGHALNPGQRDWTR 518 YH +GH L+ G W R Sbjct: 8450 YHFRGHLLSGGSISWDR 8500 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 353,387,532 Number of extensions: 6065126 Number of successful extensions: 27060 Number of sequences better than 10.0: 66 Length of query: 261 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 212 Effective length of database: 52,856,264 Effective search space: 11205527968 Effective search space used: 11205527968 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
