ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf178d07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|DQ245105.1| Zea mays clone 13062 mRNA sequence 436 e-119
2gb|DQ245988.1| Zea mays clone 93996 mRNA sequence 400 e-108
3gb|AY104452.1| Zea mays PCO122208 mRNA sequence 400 e-108
4ref|NM_001072038.1| Oryza sativa (japonica cultivar-group) Os10g... 394 e-106
5dbj|AK103692.1| Oryza sativa (japonica cultivar-group) cDNA clon... 394 e-106
6dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 143 1e-30
7gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 gen... 143 1e-30
8gb|AC184097.2| Populus trichocarpa clone Pop1-88A18, complete se... 64 8e-07
9gb|AC183420.2| Populus trichocarpa clone Pop1-23K9, complete seq... 64 8e-07
10gb|CP000158.1| Hyphomonas neptunium ATCC 15444, complete genome 48 0.048
11emb|AL355592.11| Human DNA sequence from clone RP11-349E4 on chr... 46 0.19
12emb|CT983398.1| partial cDNA sequence from a Lambda ZAP II norma... 44 0.75
13emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 44 0.75
14emb|Z95328.1|HS447B16 Human DNA sequence from clone RP3-447B16 o... 44 0.75
15gb|AC004384.1|AC004384 Human Chromosome X clone bWXD531, complet... 44 0.75
16gb|AC004385.1|AC004385 Human Chromosome X clone bWXD547, complet... 44 0.75
17ref|NM_111180.2| Arabidopsis thaliana NADH dehydrogenase (ubiqui... 42 2.9
18gb|AC149402.2| Phakopsora pachyrhizi clone JGIAFNA-61H18, comple... 42 2.9
19gb|AC073111.8| Homo sapiens BAC clone RP11-511P7 from 7, complet... 42 2.9
20ref|XM_387358.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 42 2.9
21gb|AY062979.1| Arabidopsis thaliana unknown protein (At3g03100) ... 42 2.9
22gb|AC165066.2| Phakopsora pachyrhizi clone JGIAFNA-401O2, comple... 42 2.9
23gb|AC165051.2| Phakopsora pachyrhizi clone JGIAFNA-1077C21, comp... 42 2.9
24gb|AF370349.1| Arabidopsis thaliana unknown protein (At3g03100) ... 42 2.9
25dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.9
26dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.9
27dbj|AB110451.1| Comamonas testosteroni bphC gene for 2,3-dihydro... 42 2.9
28gb|AY087701.1| Arabidopsis thaliana clone 37796 mRNA, complete s... 42 2.9
29emb|AJ539227.1|RSP539227 Ralstonia sp. SBUG 290 bphBCD gene clus... 42 2.9
30dbj|AP003562.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.9
31dbj|AP004133.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.9
32dbj|AK110856.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.9
33gb|AC137743.3| Mus musculus BAC clone RP24-469M15 from 6, comple... 42 2.9
34gb|M26433.1|PSEBPHCD Pseudomonas sp. 2,3-dihydroxybiphenyl dioxy... 42 2.9

>gb|DQ245105.1| Zea mays clone 13062 mRNA sequence
          Length = 872
 Score =  436 bits (220), Expect = e-119
 Identities = 385/440 (87%)
 Strand = Plus / Plus

                                                                       
Query: 105 ggcatcaaggagaagggcctcgccaacttcctccgctacgcccgcgacgagggataccta 164
           ||||||||||||||||| ||| |||||||| ||||| ||| ||||||||| |||||| | 
Sbjct: 197 ggcatcaaggagaaggggctcaccaacttcatccgcgacgtccgcgacgaaggatacttc 256

                                                                       
Query: 165 aaatgccttggggatggaaacctattgcaaaccaaaattcacaacattggtgcaaccctt 224
           |||||||||  ||| || ||||| |||||||| ||||||||||| ||||| ||||| |||
Sbjct: 257 aaatgccttctggacgggaaccttttgcaaacgaaaattcacaatattggagcaacactt 316

                                                                       
Query: 225 gtaggagttgacagttttggaaacaagtactatgagaaactacatgacactcagtatgga 284
           |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 317 gtaggagttgacaagtttggaaacaaatactatgagaaactacatgacactcagtacgga 376

                                                                       
Query: 285 aggcataggtgggtagagtatgcagagaagggtcgctacaatgcgtcccaagtgcctgct 344
           ||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 377 aggcataggtgggtagaatatgcagagaaaggtcgctacaatgcatcccaagtgcctcct 436

                                                                       
Query: 345 gaatggcatggatggctgcaccacattacagacagcactggggacaagctgctggaggag 404
           |||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| |  ||
Sbjct: 437 gaatggcatggatggctgcaccacatcacagatagcactggggataagctgctgaaccag 496

                                                                       
Query: 405 aagactaaaaagttcattatggagcacagacagaactacactggacagggtgacgacttg 464
           ||||||   | || | || | |||||||  ||||||||| | ||  ||||||| ||  ||
Sbjct: 497 aagactgctaggtaccttgtagagcacaagcagaactactccggtgagggtgaagagctg 556

                                                                       
Query: 465 atctaccactccaaggggcatgctctgaaccctgggcaaagggactggacaaggtaccag 524
           |||||||||||||||||||||||| |||| || ||||||||||||||||| ||||| |||
Sbjct: 557 atctaccactccaaggggcatgctttgaatccggggcaaagggactggacgaggtatcag 616

                               
Query: 525 ccttgggaaccaaagaaaga 544
           || ||||| |||||||||||
Sbjct: 617 ccctgggagccaaagaaaga 636



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>gb|DQ245988.1| Zea mays clone 93996 mRNA sequence
          Length = 726

 Score =  400 bits (202), Expect = e-108
 Identities = 406/474 (85%)
 Strand = Plus / Plus

                                                                       
Query: 71  atccatggccgcggtggttcggagcgtgtggcagggcatcaaggagaagggcctcgccaa 130
           ||||||||| |||||||| ||  |||| | |  |||||||||||||||||| ||| ||||
Sbjct: 74  atccatggcggcggtggtgcgcggcgtcttgaggggcatcaaggagaagggactcaccaa 133

                                                                       
Query: 131 cttcctccgctacgcccgcgacgagggatacctaaaatgccttggggatggaaacctatt 190
           |||| ||||| ||| ||||||||| |||||| | |||||||||  ||| || ||||| ||
Sbjct: 134 cttcatccgcgacgtccgcgacgaaggatacttcaaatgccttctggacgggaacctttt 193

                                                                       
Query: 191 gcaaaccaaaattcacaacattggtgcaacccttgtaggagttgacagttttggaaacaa 250
           |||||| ||||| ||||| ||||| ||||| ||||||||||||||||  ||||| |||||
Sbjct: 194 gcaaacgaaaatccacaatattggcgcaacacttgtaggagttgacaagtttggtaacaa 253

                                                                       
Query: 251 gtactatgagaaactacatgacactcagtatggaaggcataggtgggtagagtatgcaga 310
            || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 254 atattatgagaaactacatgacactcagtatggaaggcataggtgggtagaatatgcaga 313

                                                                       
Query: 311 gaagggtcgctacaatgcgtcccaagtgcctgctgaatggcatggatggctgcaccacat 370
           ||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gaaaggtcgttacaatgcatcccaagtgcctgctgaatggcatggatggctgcaccacat 373

                                                                       
Query: 371 tacagacagcactggggacaagctgctggaggagaagactaaaaagttcattatggagca 430
            ||||| ||||| ||||| ||||||||| |  ||||||||   | || | || | |||||
Sbjct: 374 cacagatagcaccggggataagctgctgaaccagaagactgctaggtaccttgtagagca 433

                                                                       
Query: 431 cagacagaactacactggacagggtgacgacttgatctaccactccaaggggcatgctct 490
           ||  ||||||||| | ||  ||||||| ||  | |||||||||||||||||||||||| |
Sbjct: 434 caagcagaactactccggtgagggtgaagagcttatctaccactccaaggggcatgcttt 493

                                                                 
Query: 491 gaaccctgggcaaagggactggacaaggtaccagccttgggaaccaaagaaaga 544
           ||| || || |||||||||||||| ||||| ||||| ||||| |||||||||||
Sbjct: 494 gaatccgggacaaagggactggacgaggtatcagccctgggagccaaagaaaga 547



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>gb|AY104452.1| Zea mays PCO122208 mRNA sequence
          Length = 921

 Score =  400 bits (202), Expect = e-108
 Identities = 406/474 (85%)
 Strand = Plus / Plus

                                                                       
Query: 71  atccatggccgcggtggttcggagcgtgtggcagggcatcaaggagaagggcctcgccaa 130
           ||||||||| |||||||| ||  |||| | |  |||||||||||||||||| ||| ||||
Sbjct: 79  atccatggcggcggtggtgcgcggcgtcttgaggggcatcaaggagaagggactcaccaa 138

                                                                       
Query: 131 cttcctccgctacgcccgcgacgagggatacctaaaatgccttggggatggaaacctatt 190
           |||| ||||| ||| ||||||||| |||||| | |||||||||  ||| || ||||| ||
Sbjct: 139 cttcatccgcgacgtccgcgacgaaggatacttcaaatgccttctggacgggaacctttt 198

                                                                       
Query: 191 gcaaaccaaaattcacaacattggtgcaacccttgtaggagttgacagttttggaaacaa 250
           |||||| ||||| ||||| ||||| ||||| ||||||||||||||||  ||||| |||||
Sbjct: 199 gcaaacgaaaatccacaatattggcgcaacacttgtaggagttgacaagtttggtaacaa 258

                                                                       
Query: 251 gtactatgagaaactacatgacactcagtatggaaggcataggtgggtagagtatgcaga 310
            || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 259 atattatgagaaactacatgacactcagtatggaaggcataggtgggtagaatatgcaga 318

                                                                       
Query: 311 gaagggtcgctacaatgcgtcccaagtgcctgctgaatggcatggatggctgcaccacat 370
           ||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gaaaggtcgttacaatgcatcccaagtgcctgctgaatggcatggatggctgcaccacat 378

                                                                       
Query: 371 tacagacagcactggggacaagctgctggaggagaagactaaaaagttcattatggagca 430
            ||||| ||||| ||||| ||||||||| |  ||||||||   | || | || | |||||
Sbjct: 379 cacagatagcaccggggataagctgctgaaccagaagactgctaggtaccttgtagagca 438

                                                                       
Query: 431 cagacagaactacactggacagggtgacgacttgatctaccactccaaggggcatgctct 490
           ||  ||||||||| | ||  ||||||| ||  | |||||||||||||||||||||||| |
Sbjct: 439 caagcagaactactccggtgagggtgaagagcttatctaccactccaaggggcatgcttt 498

                                                                 
Query: 491 gaaccctgggcaaagggactggacaaggtaccagccttgggaaccaaagaaaga 544
           ||| || || |||||||||||||| ||||| ||||| ||||| |||||||||||
Sbjct: 499 gaatccgggacaaagggactggacgaggtatcagccctgggagccaaagaaaga 552



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>ref|NM_001072038.1| Oryza sativa (japonica cultivar-group) Os10g0579300 (Os10g0579300)
           mRNA, complete cds
          Length = 787

 Score =  394 bits (199), Expect = e-106
 Identities = 412/483 (85%)
 Strand = Plus / Plus

                                                                       
Query: 73  ccatggccgcggtggttcggagcgtgtggcagggcatcaaggagaagggcctcgccaact 132
           ||||||| |||||||| ||  |||||| | | ||||||  ||||||||||||| ||||||
Sbjct: 61  ccatggctgcggtggtgcgtggcgtgttgaacggcatccgggagaagggcctctccaact 120

                                                                       
Query: 133 tcctccgctacgcccgcgacgagggatacctaaaatgccttggggatggaaacctattgc 192
           |||||||| | ||||||||||| || ||| | |||||||||  |||||||||||| ||||
Sbjct: 121 tcctccgccatgcccgcgacgaaggctacttcaaatgccttctggatggaaacctcttgc 180

                                                                       
Query: 193 aaaccaaaattcacaacattggtgcaacccttgtaggagttgacagttttggaaacaagt 252
           |||| ||||| ||||| || || || || ||||||||||| ||||  || || ||||| |
Sbjct: 181 aaactaaaatccacaatatcggcgccacacttgtaggagtagacaagttcggcaacaaat 240

                                                                       
Query: 253 actatgagaaactacatgacactcagtatggaaggcataggtgggtagagtatgcagaga 312
           | ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 241 attatgaaaaactacatgacactcagtatggaaggcacaggtgggtagaatatgcagaga 300

                                                                       
Query: 313 agggtcgctacaatgcgtcccaagtgcctgctgaatggcatggatggctgcaccacatta 372
           | || ||||||||||| |||||||||||  |||||||||||||||||||||||||||| |
Sbjct: 301 aagggcgctacaatgcatcccaagtgccccctgaatggcatggatggctgcaccacatca 360

                                                                       
Query: 373 cagacagcactggggacaagctgctggaggagaagactaaaaagttcattatggagcaca 432
           | ||||||||||||||| |||| |||||| ||||  |||||  || |||  |||| ||||
Sbjct: 361 ccgacagcactggggacgagctactggagcagaatgctaaagcgtacatcgtggatcaca 420

                                                                       
Query: 433 gacagaactacactggacagggtgacgacttgatctaccactccaaggggcatgctctga 492
              |||||| | | ||  ||||||| ||  |||||||||||||||||||||||||||| |
Sbjct: 421 aggagaacttctccggcgagggtgaggaactgatctaccactccaaggggcatgctctaa 480

                                                                       
Query: 493 accctgggcaaagggactggacaaggtaccagccttgggaaccaaagaaagaagaggcca 552
           |||| || |||||||||||||| ||||||||||| ||||||||||||||||||||||| |
Sbjct: 481 acccaggacaaagggactggacgaggtaccagccgtgggaaccaaagaaagaagaggcaa 540

              
Query: 553 cct 555
           |||
Sbjct: 541 cct 543



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>dbj|AK103692.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136H20, full
           insert sequence
          Length = 788

 Score =  394 bits (199), Expect = e-106
 Identities = 412/483 (85%)
 Strand = Plus / Plus

                                                                       
Query: 73  ccatggccgcggtggttcggagcgtgtggcagggcatcaaggagaagggcctcgccaact 132
           ||||||| |||||||| ||  |||||| | | ||||||  ||||||||||||| ||||||
Sbjct: 62  ccatggctgcggtggtgcgtggcgtgttgaacggcatccgggagaagggcctctccaact 121

                                                                       
Query: 133 tcctccgctacgcccgcgacgagggatacctaaaatgccttggggatggaaacctattgc 192
           |||||||| | ||||||||||| || ||| | |||||||||  |||||||||||| ||||
Sbjct: 122 tcctccgccatgcccgcgacgaaggctacttcaaatgccttctggatggaaacctcttgc 181

                                                                       
Query: 193 aaaccaaaattcacaacattggtgcaacccttgtaggagttgacagttttggaaacaagt 252
           |||| ||||| ||||| || || || || ||||||||||| ||||  || || ||||| |
Sbjct: 182 aaactaaaatccacaatatcggcgccacacttgtaggagtagacaagttcggcaacaaat 241

                                                                       
Query: 253 actatgagaaactacatgacactcagtatggaaggcataggtgggtagagtatgcagaga 312
           | ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 242 attatgaaaaactacatgacactcagtatggaaggcacaggtgggtagaatatgcagaga 301

                                                                       
Query: 313 agggtcgctacaatgcgtcccaagtgcctgctgaatggcatggatggctgcaccacatta 372
           | || ||||||||||| |||||||||||  |||||||||||||||||||||||||||| |
Sbjct: 302 aagggcgctacaatgcatcccaagtgccccctgaatggcatggatggctgcaccacatca 361

                                                                       
Query: 373 cagacagcactggggacaagctgctggaggagaagactaaaaagttcattatggagcaca 432
           | ||||||||||||||| |||| |||||| ||||  |||||  || |||  |||| ||||
Sbjct: 362 ccgacagcactggggacgagctactggagcagaatgctaaagcgtacatcgtggatcaca 421

                                                                       
Query: 433 gacagaactacactggacagggtgacgacttgatctaccactccaaggggcatgctctga 492
              |||||| | | ||  ||||||| ||  |||||||||||||||||||||||||||| |
Sbjct: 422 aggagaacttctccggcgagggtgaggaactgatctaccactccaaggggcatgctctaa 481

                                                                       
Query: 493 accctgggcaaagggactggacaaggtaccagccttgggaaccaaagaaagaagaggcca 552
           |||| || |||||||||||||| ||||||||||| ||||||||||||||||||||||| |
Sbjct: 482 acccaggacaaagggactggacgaggtaccagccgtgggaaccaaagaaagaagaggcaa 541

              
Query: 553 cct 555
           |||
Sbjct: 542 cct 544



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score =  143 bits (72), Expect = 1e-30
 Identities = 99/108 (91%)
 Strand = Plus / Minus

                                                                            
Query: 282      ggaaggcataggtgggtagagtatgcagagaagggtcgctacaatgcgtcccaagtgcct 341
                |||||||| ||||||||||| ||||||||||| || ||||||||||| ||||||||||| 
Sbjct: 22581877 ggaaggcacaggtgggtagaatatgcagagaaagggcgctacaatgcatcccaagtgccc 22581818

                                                                
Query: 342      gctgaatggcatggatggctgcaccacattacagacagcactggggac 389
                 |||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 22581817 cctgaatggcatggatggctgcaccacatcaccgacagcactggggac 22581770



 Score =  137 bits (69), Expect = 7e-29
 Identities = 87/93 (93%)
 Strand = Plus / Minus

                                                                            
Query: 463      tgatctaccactccaaggggcatgctctgaaccctgggcaaagggactggacaaggtacc 522
                |||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||
Sbjct: 22580324 tgatctaccactccaaggggcatgctctaaacccaggacaaagggactggacgaggtacc 22580265

                                                 
Query: 523      agccttgggaaccaaagaaagaagaggccacct 555
                |||| ||||||||||||||||||||||| ||||
Sbjct: 22580264 agccgtgggaaccaaagaaagaagaggcaacct 22580232



 Score = 67.9 bits (34), Expect = 5e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                            
Query: 73       ccatggccgcggtggttcggagcgtgtggcagggcatcaaggagaagggcctcgccaact 132
                ||||||| |||||||| ||  |||||| | | ||||||  ||||||||||||| ||||||
Sbjct: 22582819 ccatggctgcggtggtgcgtggcgtgttgaacggcatccgggagaagggcctctccaact 22582760

                                      
Query: 133      tcctccgctacgcccgcgacga 154
                |||||||| | |||||||||||
Sbjct: 22582759 tcctccgccatgcccgcgacga 22582738



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                            
Query: 191      gcaaaccaaaattcacaacattggtgcaacccttgtaggagttgacagttttggaaacaa 250
                |||||| ||||| ||||| || || || || ||||||||||| ||||  || || |||||
Sbjct: 22582282 gcaaactaaaatccacaatatcggcgccacacttgtaggagtagacaagttcggcaacaa 22582223

                                                 
Query: 251      gtactatgagaaactacatgacactcagtatgg 283
                 || ||||| |||||||||||||||||||||||
Sbjct: 22582222 atattatgaaaaactacatgacactcagtatgg 22582190



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>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete
             sequence
          Length = 139999

 Score =  143 bits (72), Expect = 1e-30
 Identities = 99/108 (91%)
 Strand = Plus / Minus

                                                                         
Query: 282   ggaaggcataggtgggtagagtatgcagagaagggtcgctacaatgcgtcccaagtgcct 341
             |||||||| ||||||||||| ||||||||||| || ||||||||||| ||||||||||| 
Sbjct: 36546 ggaaggcacaggtgggtagaatatgcagagaaagggcgctacaatgcatcccaagtgccc 36487

                                                             
Query: 342   gctgaatggcatggatggctgcaccacattacagacagcactggggac 389
              |||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 36486 cctgaatggcatggatggctgcaccacatcaccgacagcactggggac 36439



 Score =  137 bits (69), Expect = 7e-29
 Identities = 87/93 (93%)
 Strand = Plus / Minus

                                                                         
Query: 463   tgatctaccactccaaggggcatgctctgaaccctgggcaaagggactggacaaggtacc 522
             |||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||
Sbjct: 34993 tgatctaccactccaaggggcatgctctaaacccaggacaaagggactggacgaggtacc 34934

                                              
Query: 523   agccttgggaaccaaagaaagaagaggccacct 555
             |||| ||||||||||||||||||||||| ||||
Sbjct: 34933 agccgtgggaaccaaagaaagaagaggcaacct 34901



 Score = 67.9 bits (34), Expect = 5e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                         
Query: 73    ccatggccgcggtggttcggagcgtgtggcagggcatcaaggagaagggcctcgccaact 132
             ||||||| |||||||| ||  |||||| | | ||||||  ||||||||||||| ||||||
Sbjct: 37488 ccatggctgcggtggtgcgtggcgtgttgaacggcatccgggagaagggcctctccaact 37429

                                   
Query: 133   tcctccgctacgcccgcgacga 154
             |||||||| | |||||||||||
Sbjct: 37428 tcctccgccatgcccgcgacga 37407



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                         
Query: 191   gcaaaccaaaattcacaacattggtgcaacccttgtaggagttgacagttttggaaacaa 250
             |||||| ||||| ||||| || || || || ||||||||||| ||||  || || |||||
Sbjct: 36951 gcaaactaaaatccacaatatcggcgccacacttgtaggagtagacaagttcggcaacaa 36892

                                              
Query: 251   gtactatgagaaactacatgacactcagtatgg 283
              || ||||| |||||||||||||||||||||||
Sbjct: 36891 atattatgaaaaactacatgacactcagtatgg 36859



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>gb|AC184097.2| Populus trichocarpa clone Pop1-88A18, complete sequence
          Length = 96720

 Score = 63.9 bits (32), Expect = 8e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                         
Query: 191   gcaaaccaaaattcacaacattggtgcaacccttgtaggagttgacagttttggaaacaa 250
             |||||||||||| ||||||||||||||||  ||||| || |||||||  ||||| |||||
Sbjct: 13589 gcaaaccaaaatacacaacattggtgcaaagcttgttggcgttgacaaatttggtaacaa 13648

                         
Query: 251   gtactatgagaa 262
             ||| ||| ||||
Sbjct: 13649 gtattatcagaa 13660



 Score = 48.1 bits (24), Expect = 0.048
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                         
Query: 282   ggaaggcataggtgggtagagtatgcagagaagggtcgctacaatgcgtcccaagtgcct 341
             ||||||||  ||||||| || || || |||||| ||||||||||||| || ||||| || 
Sbjct: 15710 ggaaggcaccggtgggttgaatacgccgagaagagtcgctacaatgcttctcaagtacca 15769

                                 
Query: 342   gctgaatggcatggatggct 361
              | ||||||||||| |||||
Sbjct: 15770 ccagaatggcatggttggct 15789



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>gb|AC183420.2| Populus trichocarpa clone Pop1-23K9, complete sequence
          Length = 145826

 Score = 63.9 bits (32), Expect = 8e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                         
Query: 191   gcaaaccaaaattcacaacattggtgcaacccttgtaggagttgacagttttggaaacaa 250
             |||||||||||| ||||||||||||||||  ||||| || |||||||  ||||| |||||
Sbjct: 78584 gcaaaccaaaatacacaacattggtgcaaagcttgttggcgttgacaaatttggtaacaa 78525

                         
Query: 251   gtactatgagaa 262
             ||| ||| ||||
Sbjct: 78524 gtattatcagaa 78513



 Score = 48.1 bits (24), Expect = 0.048
 Identities = 66/80 (82%)
 Strand = Plus / Minus

                                                                         
Query: 282   ggaaggcataggtgggtagagtatgcagagaagggtcgctacaatgcgtcccaagtgcct 341
             ||||||||  ||||||| || || || |||||| ||||||||||||| || ||||| || 
Sbjct: 76459 ggaaggcaccggtgggttgaatacgccgagaagagtcgctacaatgcttctcaagtacca 76400

                                 
Query: 342   gctgaatggcatggatggct 361
              | ||||||||||| |||||
Sbjct: 76399 ccagaatggcatggttggct 76380



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>gb|CP000158.1| Hyphomonas neptunium ATCC 15444, complete genome
          Length = 3705021

 Score = 48.1 bits (24), Expect = 0.048
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                   
Query: 334     aagtgcctgctgaatggcatggatggctgcaccaca 369
               |||||||||| || |||||||| |||||||||||||
Sbjct: 2354582 aagtgcctgcggactggcatggctggctgcaccaca 2354547



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>emb|AL355592.11| Human DNA sequence from clone RP11-349E4 on chromosome 9 Contains a novel
              gene and a CpG island, complete sequence
          Length = 172445

 Score = 46.1 bits (23), Expect = 0.19
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 525    ccttgggaaccaaagaaagaaga 547
              |||||||||||||||||||||||
Sbjct: 119778 ccttgggaaccaaagaaagaaga 119800



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>emb|CT983398.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 182

 Score = 44.1 bits (22), Expect = 0.75
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 465 atctaccactccaaggggcatgctctgaaccctgggcaaagggactggac 514
           ||||| || |||||||| ||||| ||||| || ||||| |||||||||||
Sbjct: 10  atctatcattccaagggacatgcgctgaatccagggcagagggactggac 59



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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 44.1 bits (22), Expect = 0.75
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 210     attggtgcaacccttgtaggag 231
               ||||||||||||||||||||||
Sbjct: 4780049 attggtgcaacccttgtaggag 4780070



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>emb|Z95328.1|HS447B16 Human DNA sequence from clone RP3-447B16 on chromosome Xq13.1-13.3,
             complete sequence
          Length = 93250

 Score = 44.1 bits (22), Expect = 0.75
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 252   tactatgagaaactacatgaca 273
             ||||||||||||||||||||||
Sbjct: 52885 tactatgagaaactacatgaca 52906



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>gb|AC004384.1|AC004384 Human Chromosome X clone bWXD531, complete sequence
          Length = 164675

 Score = 44.1 bits (22), Expect = 0.75
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 252   tactatgagaaactacatgaca 273
             ||||||||||||||||||||||
Sbjct: 70172 tactatgagaaactacatgaca 70151



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>gb|AC004385.1|AC004385 Human Chromosome X clone bWXD547, complete sequence
          Length = 177311

 Score = 44.1 bits (22), Expect = 0.75
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 252  tactatgagaaactacatgaca 273
            ||||||||||||||||||||||
Sbjct: 7105 tactatgagaaactacatgaca 7126



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>ref|NM_111180.2| Arabidopsis thaliana NADH dehydrogenase (ubiquinone)/ electron
           transporter/ oxidoreductase (AT3G03100) mRNA, complete
           cds
          Length = 709

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 144/185 (77%)
 Strand = Plus / Plus

                                                                       
Query: 177 gatggaaacctattgcaaaccaaaattcacaacattggtgcaacccttgtaggagttgac 236
           ||||| ||||| |||||||| ||||| || ||||| || || || ||||| || ||||||
Sbjct: 155 gatgggaacctcttgcaaactaaaatacataacataggagcgacacttgttggtgttgac 214

                                                                       
Query: 237 agttttggaaacaagtactatgagaaactacatgacactcagtatggaaggcataggtgg 296
           |  || || ||||| |||||  |||| |||   || ||||| || || ||||| || |||
Sbjct: 215 aagttcggtaacaaatactaccagaagctaggcgatactcaatacggtaggcacagatgg 274

                                                                       
Query: 297 gtagagtatgcagagaagggtcgctacaatgcgtcccaagtgcctgctgaatggcatgga 356
           |||||||||||    |||| ||| ||||| || || ||||| || ||||||||||| || 
Sbjct: 275 gtagagtatgcttcaaaggatcgttacaacgcatctcaagtaccagctgaatggcacggg 334

                
Query: 357 tggct 361
           |||||
Sbjct: 335 tggct 339



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>gb|AC149402.2| Phakopsora pachyrhizi clone JGIAFNA-61H18, complete sequence
          Length = 37448

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 487   ctctgaaccctgggcaaaggg 507
             |||||||||||||||||||||
Sbjct: 24453 ctctgaaccctgggcaaaggg 24473



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>gb|AC073111.8| Homo sapiens BAC clone RP11-511P7 from 7, complete sequence
          Length = 115003

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 537   aagaaagaagaggccacctga 557
             |||||||||||||||||||||
Sbjct: 64282 aagaaagaagaggccacctga 64262



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>ref|XM_387358.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07182.1)
           partial mRNA
          Length = 1338

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 117 aagggcctcgccaacttcctc 137
           |||||||||||||||||||||
Sbjct: 244 aagggcctcgccaacttcctc 264



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>gb|AY062979.1| Arabidopsis thaliana unknown protein (At3g03100) mRNA, complete cds
          Length = 511

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 144/185 (77%)
 Strand = Plus / Plus

                                                                       
Query: 177 gatggaaacctattgcaaaccaaaattcacaacattggtgcaacccttgtaggagttgac 236
           ||||| ||||| |||||||| ||||| || ||||| || || || ||||| || ||||||
Sbjct: 106 gatgggaacctcttgcaaactaaaatacataacataggagcgacacttgttggtgttgac 165

                                                                       
Query: 237 agttttggaaacaagtactatgagaaactacatgacactcagtatggaaggcataggtgg 296
           |  || || ||||| |||||  |||| |||   || ||||| || || ||||| || |||
Sbjct: 166 aagttcggtaacaaatactaccagaagctaggcgatactcaatacggtaggcacagatgg 225

                                                                       
Query: 297 gtagagtatgcagagaagggtcgctacaatgcgtcccaagtgcctgctgaatggcatgga 356
           |||||||||||    |||| ||| ||||| || || ||||| || ||||||||||| || 
Sbjct: 226 gtagagtatgcttcaaaggatcgttacaacgcatctcaagtaccagctgaatggcacggg 285

                
Query: 357 tggct 361
           |||||
Sbjct: 286 tggct 290



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>gb|AC165066.2| Phakopsora pachyrhizi clone JGIAFNA-401O2, complete sequence
          Length = 39855

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 487   ctctgaaccctgggcaaaggg 507
             |||||||||||||||||||||
Sbjct: 35304 ctctgaaccctgggcaaaggg 35284



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>gb|AC165051.2| Phakopsora pachyrhizi clone JGIAFNA-1077C21, complete sequence
          Length = 35591

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 487  ctctgaaccctgggcaaaggg 507
            |||||||||||||||||||||
Sbjct: 1829 ctctgaaccctgggcaaaggg 1849



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>gb|AF370349.1| Arabidopsis thaliana unknown protein (At3g03100) mRNA, complete cds
          Length = 720

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 144/185 (77%)
 Strand = Plus / Plus

                                                                       
Query: 177 gatggaaacctattgcaaaccaaaattcacaacattggtgcaacccttgtaggagttgac 236
           ||||| ||||| |||||||| ||||| || ||||| || || || ||||| || ||||||
Sbjct: 147 gatgggaacctcttgcaaactaaaatacataacataggagcgacacttgttggtgttgac 206

                                                                       
Query: 237 agttttggaaacaagtactatgagaaactacatgacactcagtatggaaggcataggtgg 296
           |  || || ||||| |||||  |||| |||   || ||||| || || ||||| || |||
Sbjct: 207 aagttcggtaacaaatactaccagaagctaggcgatactcaatacggtaggcacagatgg 266

                                                                       
Query: 297 gtagagtatgcagagaagggtcgctacaatgcgtcccaagtgcctgctgaatggcatgga 356
           |||||||||||    |||| ||| ||||| || || ||||| || ||||||||||| || 
Sbjct: 267 gtagagtatgcttcaaaggatcgttacaacgcatctcaagtaccagctgaatggcacggg 326

                
Query: 357 tggct 361
           |||||
Sbjct: 327 tggct 331



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 668      atgtactatatctgatactga 688
                |||||||||||||||||||||
Sbjct: 25795245 atgtactatatctgatactga 25795225



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 523      agccttgggaaccaaagaaagaaga 547
                |||||| ||||||||||||||||||
Sbjct: 18352990 agccttaggaaccaaagaaagaaga 18353014



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>dbj|AB110451.1| Comamonas testosteroni bphC gene for 2,3-dihydroxybiphenyl
            1,2-dioxygenase, partial cds, strain: KF704
          Length = 1170

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 107  catcaaggagaagggcctcgccaacttcc 135
            |||||| |||||||||||| |||||||||
Sbjct: 1107 catcaacgagaagggcctctccaacttcc 1135



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>gb|AY087701.1| Arabidopsis thaliana clone 37796 mRNA, complete sequence
          Length = 702

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 144/185 (77%)
 Strand = Plus / Plus

                                                                       
Query: 177 gatggaaacctattgcaaaccaaaattcacaacattggtgcaacccttgtaggagttgac 236
           ||||| ||||| |||||||| ||||| || ||||| || || || ||||| || ||||||
Sbjct: 148 gatgggaacctcttgcaaactaaaatacataacataggagcgacacttgttggtgttgac 207

                                                                       
Query: 237 agttttggaaacaagtactatgagaaactacatgacactcagtatggaaggcataggtgg 296
           |  || || ||||| |||||  |||| |||   || ||||| || || ||||| || |||
Sbjct: 208 aagttcggtaacaaatactaccagaagctaggcgatactcaatacggtaggcacagatgg 267

                                                                       
Query: 297 gtagagtatgcagagaagggtcgctacaatgcgtcccaagtgcctgctgaatggcatgga 356
           |||||||||||    |||| ||| ||||| || || ||||| || ||||||||||| || 
Sbjct: 268 gtagagtatgcttcaaaggatcgttacaacgcatctcaagtaccagctgaatggcacggg 327

                
Query: 357 tggct 361
           |||||
Sbjct: 328 tggct 332



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>emb|AJ539227.1|RSP539227 Ralstonia sp. SBUG 290 bphBCD gene cluster (bphB, bphC, bphD) and
            flanking ORF1
          Length = 3252

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 107  catcaaggagaagggcctcgccaacttcc 135
            |||||| |||||||||||| |||||||||
Sbjct: 1854 catcaacgagaagggcctctccaacttcc 1882



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>dbj|AP003562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1108H10
          Length = 136357

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 523    agccttgggaaccaaagaaagaaga 547
              |||||| ||||||||||||||||||
Sbjct: 110324 agccttaggaaccaaagaaagaaga 110348



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>dbj|AP004133.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1112_G03
          Length = 106401

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 668   atgtactatatctgatactga 688
             |||||||||||||||||||||
Sbjct: 41851 atgtactatatctgatactga 41831



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>dbj|AK110856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-D01, full
            insert sequence
          Length = 1457

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 668  atgtactatatctgatactga 688
            |||||||||||||||||||||
Sbjct: 1394 atgtactatatctgatactga 1414



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>gb|AC137743.3| Mus musculus BAC clone RP24-469M15 from 6, complete sequence
          Length = 170200

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 645    gtttcatggactggacctgaa 665
              |||||||||||||||||||||
Sbjct: 103516 gtttcatggactggacctgaa 103496



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>gb|M26433.1|PSEBPHCD Pseudomonas sp. 2,3-dihydroxybiphenyl dioxygenase (bphC) and
            2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase
            (bphD) genes, complete cds
          Length = 2124

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 107  catcaaggagaagggcctcgccaacttcc 135
            |||||| |||||||||||| |||||||||
Sbjct: 1176 catcaacgagaagggcctctccaacttcc 1204


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 137,398,079
Number of extensions: 7382388
Number of successful extensions: 140713
Number of sequences better than 10.0: 34
Number of HSP's gapped: 140709
Number of HSP's successfully gapped: 47
Length of query: 784
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 762
Effective length of database: 18,508,616,841
Effective search space: 14103566032842
Effective search space used: 14103566032842
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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