ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf174j12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY968588.1| Triticum aestivum ice recrystallization inhibitio... 513 e-142
2emb|AJ277399.1|LPE277399 Lolium perenne partial mRNA for ice rec... 214 5e-52
3gb|AY968589.1| Triticum aestivum ice recrystallization inhibitio... 139 2e-29
4gb|BT024033.1| Zea mays clone EL01N0423B02 mRNA sequence 62 4e-06
5ref|NM_001065246.1| Oryza sativa (japonica cultivar-group) Os07g... 54 0.001
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 54 0.001
7dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic D... 54 0.001
8dbj|AK121984.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 0.001
9dbj|AK103166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 0.001
10dbj|AK064359.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 0.001
11gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, compl... 46 0.26
12ref|XM_642571.1| Dictyostelium discoideum AX4 hypothetical prote... 44 1.0
13gb|AC148151.3| Monodelphis domestica clone VMRC6-414K6, complete... 44 1.0
14ref|NM_001058602.1| Oryza sativa (japonica cultivar-group) Os04g... 42 4.1
15ref|NM_001049193.1| Oryza sativa (japonica cultivar-group) Os01g... 42 4.1
16ref|XM_634952.1| Dictyostelium discoideum AX4 putative protein s... 42 4.1
17gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome... 42 4.1
18gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome... 42 4.1
19gb|AC135240.2| Mus musculus BAC clone RP24-63O24 from chromosome... 42 4.1
20gb|AC140420.4| Mus musculus BAC clone RP24-440F22 from chromosom... 42 4.1
21gb|AC163494.3| Mus musculus chromosome 7, clone RP23-221O21, com... 42 4.1
22gb|AC101818.9| Mus musculus chromosome 7, clone RP24-363I8, comp... 42 4.1
23gb|AC114791.3| Homo sapiens BAC clone RP11-658B24 from 4, comple... 42 4.1
24dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.1
25dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.1
26dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.1
27emb|AL355796.11| Human DNA sequence from clone RP11-46B11 on chr... 42 4.1
28dbj|AP003340.3| Oryza sativa (japonica cultivar-group) genomic D... 42 4.1
29dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.1
30dbj|AK067558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 4.1
31dbj|AP001984.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 4.1
32gb|AC174772.1| Gasterosteus aculeatus clone VMRC28-84K14, comple... 42 4.1
33gb|AC005772.1|AC005772 Homo sapiens chromosome 17, clone hRPK.92... 42 4.1
34emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4,... 42 4.1 
>gb|AY968588.1| Triticum aestivum ice recrystallization inhibition protein 1
           precursor, mRNA, complete cds
          Length = 1079
 Score =  513 bits (259), Expect = e-142
 Identities = 706/854 (82%), Gaps = 7/854 (0%)
 Strand = Plus / Plus

                                                                       
Query: 90  gaatccatggcgaaatactggatgctgctccacttcttggcggtcctcttgcccgcggcg 149
           |||||||||||||||| | || |||||||||  ||||||||| |||||||||| ||||| 
Sbjct: 83  gaatccatggcgaaatgcgggctgctgctcctgttcttggcgttcctcttgccggcggca 142

                                                                       
Query: 150 agcgccacgtcatgccacgtcgacgacctccgcgcgctgagggactttgccgggaacctc 209
            | || ||||| ||||||  ||| |||||||| |||||  ||| ||| ||||| ||||||
Sbjct: 143 cgtgcaacgtcgtgccaccccgatgacctccgtgcgctacggggcttcgccggaaacctc 202

                                                                       
Query: 210 agtggtggtggcgtcctcctccgcgccgtgtggtccggcacctcgtgctgcggctgggaa 269
           || ||||| |  | ||||||||| || |  ||||||||  |||| ||||||| |||||||
Sbjct: 203 agcggtggggctgccctcctccgtgctgcctggtccggtgcctcctgctgcgtctgggaa 262

                                                                       
Query: 270 ggtgtgggctgcgacggcaaaagtggacgcgtcacgacgttgcggcttcccggtcgtggc 329
           || |||  |||||| ||||  || || || |||||| || ||||||| || || |  |||
Sbjct: 263 ggcgtgaactgcgatggcactagcggccgtgtcacggcgctgcggctccctgggcacggc 322

                                                                       
Query: 330 cttgcggggcgcatcccaggagcatcgttggcgggcctggcatggcttcaggagctcaac 389
           || | ||||| ||||||||||||||| ||||| ||||| ||| ||||  |||||||||||
Sbjct: 323 ctcgtggggctcatcccaggagcatccttggcaggccttgcacggctagaggagctcaac 382

                                                                       
Query: 390 cttgccagcaacagactggtcggcaccatcccatcgtggattggtgagcttgaccacctt 449
           ||||||| ||||| ||||||||||||||||||||| |||||||| |||||||| ||||||
Sbjct: 383 cttgccaacaacaaactggtcggcaccatcccatcatggattggcgagcttgatcacctt 442

                                                                       
Query: 450 tgcgacttggatctctccggtaattcactggatggggaggtacccaagagtttgatacgg 509
           ||| |||||||||| || | ||||||| ||| ||| ||||||||||||||||||||||||
Sbjct: 443 tgctacttggatctgtcggataattcattggttggcgaggtacccaagagtttgatacgg 502

                                                                       
Query: 510 cttaagggccacgccgccgctggtcgttcatcaggtatgactttcactaacatgccattg 569
           || ||||| |  | |  |||||||| ||||  |||||||  ||| |||||||||||||||
Sbjct: 503 ctcaagggtcttgtcatcgctggtcattcactaggtatggtttttactaacatgccattg 562

                                                                       
Query: 570 tatgtgaagcgtaacagaagaacactccaacaacaacaaccaaatatcatatccgggacc 629
           |||||||||||||| ||||||||||||    |  ||||||||||||  ||||| |||| |
Sbjct: 563 tatgtgaagcgtaatagaagaacactc---gacgaacaaccaaatacaatatctgggagc 619

                                                                       
Query: 630 aacaacaaagtacggtctggtagaaacaatgttgtatccgggaacgacaacgctgtcata 689
           |||||||  ||  | ||||| || | ||| ||||| || ||||| |||||| ||||||||
Sbjct: 620 aacaacactgtcagatctgggagcaccaacgttgtttctgggaatgacaacactgtcata 679

                                                                       
Query: 690 tctgggaacaacaacactgtgacggggagcaataataccatcacaactgggagtgacaat 749
           || ||||| ||||||| |||| | |||||||| || ||  ||| ||| ||||  ||||||
Sbjct: 680 tccgggaataacaacaatgtggctgggagcaacaacactgtcataaccgggaacgacaat 739

                                                                       
Query: 750 accgtaaccggtagcaaccatgtcgtatctgggagcaaacatatcgtaacagacaacaac 809
           |||||||| |||||||||||||| |||||||||  |||||||||||| || ||||| |||
Sbjct: 740 accgtaactggtagcaaccatgttgtatctggggacaaacatatcgtgactgacaataac 799

                                                                       
Query: 810 aatgttgtttctgggattgacaataatgtatccgggagcttccacaccgtatctgggagt 869
           ||||  || || ||    |||||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 800 aatgccgtatccgg----gacaataatgtatccgggagcttccataccgtatccgggagc 855

                                                                       
Query: 870 ctcaataccgtatccgggagcaacaatactgtatctgggagcaatcatgttgtgtctggg 929
           | |||||| ||||| |||| |||||| ||||||||||||||||| ||||| || ||||||
Sbjct: 856 cacaatactgtatctgggaccaacaacactgtatctgggagcaaccatgtcgtatctggg 915

                         
Query: 930 agcaacaaagtcgt 943
           |||||||| |||||
Sbjct: 916 agcaacaaggtcgt 929



 Score = 67.9 bits (34), Expect = 7e-08
 Identities = 50/54 (92%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                  
Query: 974  tagctcacaatcacttgg-tggggccaatcgtgttatgtaacttcatggatata 1026
            |||| ||||||||||||| ||||| |||| ||||||||||||||||||||||||
Sbjct: 1004 tagcccacaatcacttgggtggggtcaatagtgttatgtaacttcatggatata 1057
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>emb|AJ277399.1|LPE277399 Lolium perenne partial mRNA for ice recrystallisation inhibition
           protein
          Length = 357

 Score =  214 bits (108), Expect = 5e-52
 Identities = 237/280 (84%)
 Strand = Plus / Plus

                                                                       
Query: 669 gggaacgacaacgctgtcatatctgggaacaacaacactgtgacggggagcaataatacc 728
           ||||| |||||| | |||||||||||| ||||||| | |||| | |||||||| || || 
Sbjct: 70  gggaatgacaacaccgtcatatctggggacaacaatagtgtgtctgggagcaacaacact 129

                                                                       
Query: 729 atcacaactgggagtgacaataccgtaaccggtagcaaccatgtcgtatctgggagcaaa 788
            ||  || ||||| |||||||||||||||||| ||||||||||||||||| ||||  || 
Sbjct: 130 gtcgtaagtgggaatgacaataccgtaaccggcagcaaccatgtcgtatcagggacaaac 189

                                                                       
Query: 789 catatcgtaacagacaacaacaatgttgtttctgggattgacaataatgtatccgggagc 848
           |||||||| |||||||||||||||   || || ||||  || ||||||||||||||||||
Sbjct: 190 catatcgttacagacaacaacaataacgtatccgggaacgataataatgtatccgggagc 249

                                                                       
Query: 849 ttccacaccgtatctgggagtctcaataccgtatccgggagcaacaatactgtatctggg 908
           || || |||||||| ||| | | |||||| || ||||||||||||||||| |||||||||
Sbjct: 250 tttcataccgtatccggggggcacaatactgtctccgggagcaacaataccgtatctggg 309

                                                   
Query: 909 agcaatcatgttgtgtctgggagcaacaaagtcgtgacag 948
           ||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 310 agcaaccacgttgtatctggaagcaacaaagtcgtgacag 349
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>gb|AY968589.1| Triticum aestivum ice recrystallization inhibition protein 2
           precursor, mRNA, complete cds
          Length = 1596

 Score =  139 bits (70), Expect = 2e-29
 Identities = 174/208 (83%), Gaps = 3/208 (1%)
 Strand = Plus / Plus

                                                                       
Query: 383 gctcaaccttgccagcaacagactggtcggcaccatcccatcgtggattggtgagcttga 442
           ||||| |||||||| ||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 744 gctcagccttgccaacaacagattggtcggcaccatcccgtcgtggattggtgagcttga 803

                                                                       
Query: 443 ccacctttgcgacttggatctctccggtaattcactggatggggaggtacccaagagttt 502
           |||||||  | |||||||||||||   ||||||| ||  |||  ||||||| ||||||| 
Sbjct: 804 ccaccttcactacttggatctctcaaataattcaatgattggcaaggtaccgaagagttc 863

                                                                       
Query: 503 gatacggcttaagggccacgccgccgct---ggtcgttcatcaggtatgactttcactaa 559
           || ||| || ||||||| |||| ||| |   || | |||| | |||||| ||||||||||
Sbjct: 864 gacacgactcaagggcctcgccaccgttgtggggcattcaccgggtatggctttcactaa 923

                                       
Query: 560 catgccattgtatgtgaagcgtaacaga 587
           |||||| ||||| | |||||||||||||
Sbjct: 924 catgcccttgtacgagaagcgtaacaga 951



 Score = 77.8 bits (39), Expect = 7e-11
 Identities = 154/189 (81%), Gaps = 5/189 (2%)
 Strand = Plus / Plus

                                                                       
Query: 94  ccatggcgaaatactggatgctgctccacttcttggcggtcctcttgcccgcggcgagcg 153
           |||||||||||| |||| |||||||   || ||||||| | |||||||| ||||| ||||
Sbjct: 20  ccatggcgaaatcctggctgctgctgttctgcttggcgtttctcttgccggcggcaagcg 79

                                                                       
Query: 154 ccacgtcatgccacgtcgacgacctccgcgcgctgagggactttgccgggaacctcagtg 213
           | ||||   |||||  ||||||||| || |||||| ||| ||| ||||| ||||| || |
Sbjct: 80  cgacgt---gccaccccgacgacctacgtgcgctgcggggcttggccgg-aaccttaggg 135

                                                                       
Query: 214 gtggtggcgt-cctcctccgcgccgtgtggtccggcacctcgtgctgcggctgggaaggt 272
           | |||||||  || ||||| |  ||||||||| ||| ||||||||||||  |||||||||
Sbjct: 136 gcggtggcgcgccacctccacagcgtgtggtctggcgcctcgtgctgcgattgggaaggt 195

                    
Query: 273 gtgggctgc 281
           |||||||||
Sbjct: 196 gtgggctgc 204



 Score = 60.0 bits (30), Expect = 2e-05
 Identities = 58/66 (87%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                        
Query: 978  tcacaatcacttggtggggccaatcgtgt-tatgtaacttcatggatatagcatcctttt 1036
            |||||||| ||||||||||||||||| || | ||||||||||||| ||||| ||||| ||
Sbjct: 1320 tcacaatcccttggtggggccaatcgcgtatttgtaacttcatgggtatagaatcctatt 1379

                  
Query: 1037 cctact 1042
             |||||
Sbjct: 1380 actact 1385



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                        
Query: 885  gggagcaacaatactgtatctgggagcaatcatgttgtgtctgggagcaacaaagtcgtg 944
            |||||||| |||  |||||||||||| || ||||| || |||||||  ||||||||||| 
Sbjct: 1180 gggagcaataatgttgtatctgggagaaaccatgtcgtatctgggaataacaaagtcgta 1239

                       
Query: 945  acaggaggtta 955
            || ||||||||
Sbjct: 1240 actggaggtta 1250



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                  
Query: 878  cgtatccgggagcaacaatactgtatctgggagcaatcatgttgtgtctgggag 931
            |||||||||||| ||||||   ||| ||||||||||| ||||||| ||||||||
Sbjct: 1152 cgtatccgggaggaacaatgtcgtaactgggagcaataatgttgtatctgggag 1205
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>gb|BT024033.1| Zea mays clone EL01N0423B02 mRNA sequence
          Length = 2283

 Score = 61.9 bits (31), Expect = 4e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 543 ggtatgactttcactaacatgccattgtatgtgaagcgtaacagaag 589
           |||||| | ||||||| |||||||||||||||||||| |||||||||
Sbjct: 444 ggtatggcgttcactagcatgccattgtatgtgaagcataacagaag 490
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>ref|NM_001065246.1| Oryza sativa (japonica cultivar-group) Os07g0107800 (Os07g0107800)
            mRNA, complete cds
          Length = 3389

 Score = 54.0 bits (27), Expect = 0.001
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                       
Query: 543  ggtatgactttcactaacatgccattgtatgtgaagcgtaaca 585
            |||||| | |||||||||||||| ||||||||||||| |||||
Sbjct: 1623 ggtatggcgttcactaacatgccgttgtatgtgaagcataaca 1665



 Score = 46.1 bits (23), Expect = 0.26
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 976  gctcacaatcacttggtggggcc 998
            |||||||||||||||||||||||
Sbjct: 1941 gctcacaatcacttggtggggcc 1963
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 54.0 bits (27), Expect = 0.001
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                         
Query: 543    ggtatgactttcactaacatgccattgtatgtgaagcgtaaca 585
              |||||| | |||||||||||||| ||||||||||||| |||||
Sbjct: 425594 ggtatggcgttcactaacatgccgttgtatgtgaagcataaca 425636



 Score = 46.1 bits (23), Expect = 0.26
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 976    gctcacaatcacttggtggggcc 998
              |||||||||||||||||||||||
Sbjct: 425912 gctcacaatcacttggtggggcc 425934
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>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0585H11
          Length = 149371

 Score = 54.0 bits (27), Expect = 0.001
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 543   ggtatgactttcactaacatgccattgtatgtgaagcgtaaca 585
             |||||| | |||||||||||||| ||||||||||||| |||||
Sbjct: 27758 ggtatggcgttcactaacatgccgttgtatgtgaagcataaca 27800



 Score = 46.1 bits (23), Expect = 0.26
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 976   gctcacaatcacttggtggggcc 998
             |||||||||||||||||||||||
Sbjct: 28076 gctcacaatcacttggtggggcc 28098
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>dbj|AK121984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108O10, full
            insert sequence
          Length = 3392

 Score = 54.0 bits (27), Expect = 0.001
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                       
Query: 543  ggtatgactttcactaacatgccattgtatgtgaagcgtaaca 585
            |||||| | |||||||||||||| ||||||||||||| |||||
Sbjct: 1624 ggtatggcgttcactaacatgccgttgtatgtgaagcataaca 1666



 Score = 46.1 bits (23), Expect = 0.26
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 976  gctcacaatcacttggtggggcc 998
            |||||||||||||||||||||||
Sbjct: 1942 gctcacaatcacttggtggggcc 1964
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>dbj|AK103166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121E13, full
            insert sequence
          Length = 2958

 Score = 54.0 bits (27), Expect = 0.001
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                       
Query: 543  ggtatgactttcactaacatgccattgtatgtgaagcgtaaca 585
            |||||| | |||||||||||||| ||||||||||||| |||||
Sbjct: 1162 ggtatggcgttcactaacatgccgttgtatgtgaagcataaca 1204



 Score = 46.1 bits (23), Expect = 0.26
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 976  gctcacaatcacttggtggggcc 998
            |||||||||||||||||||||||
Sbjct: 1480 gctcacaatcacttggtggggcc 1502
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>dbj|AK064359.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B08, full
           insert sequence
          Length = 2238

 Score = 54.0 bits (27), Expect = 0.001
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 543 ggtatgactttcactaacatgccattgtatgtgaagcgtaaca 585
           |||||| | |||||||||||||| ||||||||||||| |||||
Sbjct: 309 ggtatggcgttcactaacatgccgttgtatgtgaagcataaca 351



 Score = 46.1 bits (23), Expect = 0.26
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 976 gctcacaatcacttggtggggcc 998
           |||||||||||||||||||||||
Sbjct: 627 gctcacaatcacttggtggggcc 649
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>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence
          Length = 1471779

 Score = 46.1 bits (23), Expect = 0.26
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 142    ccgcggcgagcgccacgtcatgc 164
              |||||||||||||||||||||||
Sbjct: 600124 ccgcggcgagcgccacgtcatgc 600146
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>ref|XM_642571.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0189883)
            mRNA, complete cds
          Length = 1590

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 592  cactccaacaacaacaaccaaa 613
            ||||||||||||||||||||||
Sbjct: 1214 cactccaacaacaacaaccaaa 1235
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>gb|AC148151.3| Monodelphis domestica clone VMRC6-414K6, complete sequence
          Length = 158302

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 256   gctgcggctgggaaggtgtggg 277
             ||||||||||||||||||||||
Sbjct: 40503 gctgcggctgggaaggtgtggg 40482
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>ref|NM_001058602.1| Oryza sativa (japonica cultivar-group) Os04g0119800 (Os04g0119800)
           mRNA, partial cds
          Length = 2548

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 255 tgctgcggctgggaaggtgtgggctgcgacggc 287
           ||||||||||||||||| |||| ||||| ||||
Sbjct: 199 tgctgcggctgggaaggcgtggtctgcggcggc 231
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>ref|NM_001049193.1| Oryza sativa (japonica cultivar-group) Os01g0263500 (Os01g0263500)
           mRNA, complete cds
          Length = 1212

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 163 gccacgtcgacgacctccgcgcgct 187
           ||||| |||||||||||||||||||
Sbjct: 299 gccacttcgacgacctccgcgcgct 323
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>ref|XM_634952.1| Dictyostelium discoideum AX4 putative protein serine/threonine
           kinase (DDB_0216309) mRNA, complete cds
          Length = 939

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 595 tccaacaacaacaaccaaata 615
           |||||||||||||||||||||
Sbjct: 911 tccaacaacaacaaccaaata 931
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>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07,
              complete sequence
          Length = 154528

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 170    cgacgacctccgcgcgctgag 190
              |||||||||||||||||||||
Sbjct: 137510 cgacgacctccgcgcgctgag 137530
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>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0066E19, complete sequence
          Length = 145575

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 170    cgacgacctccgcgcgctgag 190
              |||||||||||||||||||||
Sbjct: 131841 cgacgacctccgcgcgctgag 131821
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>gb|AC135240.2| Mus musculus BAC clone RP24-63O24 from chromosome 5, complete sequence
          Length = 196371

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 364   gcctggcatggcttcaggagc 384
             |||||||||||||||||||||
Sbjct: 48369 gcctggcatggcttcaggagc 48389
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>gb|AC140420.4| Mus musculus BAC clone RP24-440F22 from chromosome 5, complete sequence
          Length = 157377

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 364   gcctggcatggcttcaggagc 384
             |||||||||||||||||||||
Sbjct: 23170 gcctggcatggcttcaggagc 23150
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>gb|AC163494.3| Mus musculus chromosome 7, clone RP23-221O21, complete sequence
          Length = 193210

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1035  ttcctactttaaataaaattt 1055
             |||||||||||||||||||||
Sbjct: 49431 ttcctactttaaataaaattt 49411
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>gb|AC101818.9| Mus musculus chromosome 7, clone RP24-363I8, complete sequence
          Length = 137430

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1035  ttcctactttaaataaaattt 1055
             |||||||||||||||||||||
Sbjct: 95245 ttcctactttaaataaaattt 95265
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>gb|AC114791.3| Homo sapiens BAC clone RP11-658B24 from 4, complete sequence
          Length = 113268

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1038  ctactttaaataaaatttcca 1058
             |||||||||||||||||||||
Sbjct: 10876 ctactttaaataaaatttcca 10856
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 170      cgacgacctccgcgcgctgag 190
                |||||||||||||||||||||
Sbjct: 18733389 cgacgacctccgcgcgctgag 18733369
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 255     tgctgcggctgggaaggtgtgggctgcgacggc 287
               ||||||||||||||||| |||| ||||| ||||
Sbjct: 1147931 tgctgcggctgggaaggcgtggtctgcggcggc 1147963
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 163     gccacgtcgacgacctccgcgcgct 187
               ||||| |||||||||||||||||||
Sbjct: 8924378 gccacttcgacgacctccgcgcgct 8924402



 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 150      agcgccacgtcatgccacgtc 170
                |||||||||||||||||||||
Sbjct: 26154998 agcgccacgtcatgccacgtc 26154978
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>emb|AL355796.11| Human DNA sequence from clone RP11-46B11 on chromosome 6 Contains the
             TRIP7 gene for thyroid hormone receptor interactor 7, a
             ribosomal protein S18 (RPS18) pseudogene and part of a
             novel gene, complete sequence
          Length = 152086

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1042  tttaaataaaatttccagaaa 1062
             |||||||||||||||||||||
Sbjct: 98458 tttaaataaaatttccagaaa 98478
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>dbj|AP003340.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1316_H05
          Length = 105346

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 150   agcgccacgtcatgccacgtc 170
             |||||||||||||||||||||
Sbjct: 60415 agcgccacgtcatgccacgtc 60395
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>dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0453A06
          Length = 154378

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 163   gccacgtcgacgacctccgcgcgct 187
             ||||| |||||||||||||||||||
Sbjct: 32133 gccacttcgacgacctccgcgcgct 32157
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>dbj|AK067558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112K04, full
           insert sequence
          Length = 2553

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 255 tgctgcggctgggaaggtgtgggctgcgacggc 287
           ||||||||||||||||| |||| ||||| ||||
Sbjct: 204 tgctgcggctgggaaggcgtggtctgcggcggc 236
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>dbj|AP001984.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-597K9, complete
             sequence
          Length = 62000

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1045  aaataaaatttccagaaatta 1065
             |||||||||||||||||||||
Sbjct: 41706 aaataaaatttccagaaatta 41726
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>gb|AC174772.1| Gasterosteus aculeatus clone VMRC28-84K14, complete sequence
          Length = 121286

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1003  gtgttatgtaacttcatggat 1023
             |||||||||||||||||||||
Sbjct: 90949 gtgttatgtaacttcatggat 90929
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>gb|AC005772.1|AC005772 Homo sapiens chromosome 17, clone hRPK.924_A_14, complete sequence
          Length = 175339

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1042  tttaaataaaatttccagaaattat 1066
             |||||||||||||||||||| ||||
Sbjct: 31418 tttaaataaaatttccagaacttat 31442
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>emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020P07,
             complete sequence
          Length = 167895

 Score = 42.1 bits (21), Expect = 4.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 255   tgctgcggctgggaaggtgtgggctgcgacggc 287
             ||||||||||||||||| |||| ||||| ||||
Sbjct: 90313 tgctgcggctgggaaggcgtggtctgcggcggc 90345


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 175,895,523
Number of extensions: 9854504
Number of successful extensions: 194315
Number of sequences better than 10.0: 34
Number of HSP's gapped: 194292
Number of HSP's successfully gapped: 49
Length of query: 1088
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1065
Effective length of database: 18,503,978,556
Effective search space: 19706737162140
Effective search space used: 19706737162140
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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