ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf177p13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P0C0L1:APX6_ORYSJ Probable L-ascorbate peroxidase 6, chloroplast... 52 3e-06
2P0C0L0:APX5_ORYSJ Probable L-ascorbate peroxidase 5, chloroplast... 44 0.001
3Q7XJ02:APX7_ORYSJ Probable L-ascorbate peroxidase 7, chloroplast... 35 0.36
4Q42592:APXS_ARATH L-ascorbate peroxidase S, chloroplast/mitochon... 33 1.0
5Q6T264:MAML1_MOUSE Mastermind-like protein 1 - Mus musculus (Mouse) 32 3.0
6O70244:CUBN_RAT Cubilin precursor - Rattus norvegicus (Rat) 32 3.0
7Q69SV0:APX8_ORYSJ Probable L-ascorbate peroxidase 8, chloroplast... 32 3.0
8Q8WUA4:TF3C2_HUMAN General transcription factor 3C polypeptide 2... 32 4.0
9Q8R183:TIMD2_MOUSE T-cell immunoglobulin and mucin domain-contai... 31 5.2
10Q8N7Y1:PRR10_HUMAN Proline-rich protein 10 - Homo sapiens (Human) 31 5.2
11Q42593:APXT_ARATH L-ascorbate peroxidase T, chloroplast precurso... 31 5.2
12O83586:Y577_TREPA Uncharacterized protein TP_0577 - Treponema pa... 30 8.8
13Q07351:STP4_YEAST Zinc finger protein STP4 - Saccharomyces cerev... 30 8.8

>P0C0L1:APX6_ORYSJ Probable L-ascorbate peroxidase 6, chloroplast precursor - Oryza|
           sativa subsp. japonica (Rice)
          Length = 309
 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 29/44 (65%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
 Frame = +3

Query: 48  KELGRRXXXXXXX--GDAVAELRGAREDVKQLLKEKSCYPIL*R 173
           +ELGRR         GDA AELRGAREDVKQLLK  SC+PIL R
Sbjct: 22  QELGRRPASSSAAAAGDAAAELRGAREDVKQLLKSTSCHPILVR 65



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>P0C0L0:APX5_ORYSJ Probable L-ascorbate peroxidase 5, chloroplast precursor - Oryza|
           sativa subsp. japonica (Rice)
          Length = 320

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 25/47 (53%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
 Frame = +3

Query: 48  KELGRRXXXXXXX-----GDAVAELRGAREDVKQLLKEKSCYPIL*R 173
           +ELGRR            GD  AELR AREDV+QLLK   C+PIL R
Sbjct: 30  QELGRRPASSSSSAAAAAGDVEAELRAAREDVRQLLKSNPCHPILVR 76



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>Q7XJ02:APX7_ORYSJ Probable L-ascorbate peroxidase 7, chloroplast precursor - Oryza|
           sativa subsp. japonica (Rice)
          Length = 359

 Score = 35.0 bits (79), Expect = 0.36
 Identities = 15/25 (60%), Positives = 20/25 (80%)
 Frame = +3

Query: 99  AELRGAREDVKQLLKEKSCYPIL*R 173
           AEL+ ARED+++LLK   C+PIL R
Sbjct: 90  AELKAAREDIRELLKTTHCHPILVR 114



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>Q42592:APXS_ARATH L-ascorbate peroxidase S, chloroplast/mitochondrial precursor -|
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 372

 Score = 33.5 bits (75), Expect = 1.0
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = +3

Query: 102 ELRGAREDVKQLLKEKSCYPIL*R 173
           +L+ ARED+K+LL  K C+PIL R
Sbjct: 106 QLKNAREDIKELLSTKFCHPILVR 129



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>Q6T264:MAML1_MOUSE Mastermind-like protein 1 - Mus musculus (Mouse)|
          Length = 1020

 Score = 32.0 bits (71), Expect = 3.0
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
 Frame = +3

Query: 540 GGGTEV-----LTVVRAKWKPSGLVLK-QQAAPSDRPGMISTTNGSPPNETPFLISFPM 698
           GG +E+     L  + AK K   ++   QQAAP+  PG ++T   + P+ +P  + +PM
Sbjct: 395 GGASELSSAHQLQQIAAKQKREQMLQNPQQAAPAPGPGQLATWQQAGPSHSPLDVPYPM 453



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>O70244:CUBN_RAT Cubilin precursor - Rattus norvegicus (Rat)|
          Length = 3623

 Score = 32.0 bits (71), Expect = 3.0
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -3

Query: 540  LSSTTTNGPLTNSFESNLLLPSPFGTSFSFKISHKAVACGSI 415
            L   T +GP+  +F S+      + T F FKIS++A+ CG I
Sbjct: 3004 LRPLTVDGPVLLNFYSDA-----YTTDFGFKISYRAITCGGI 3040



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>Q69SV0:APX8_ORYSJ Probable L-ascorbate peroxidase 8, chloroplast precursor - Oryza|
           sativa subsp. japonica (Rice)
          Length = 478

 Score = 32.0 bits (71), Expect = 3.0
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = +3

Query: 99  AELRGAREDVKQLLKEKSCYPIL*R 173
           A+L+ ARED++++LK   C+PI+ R
Sbjct: 89  AQLKSAREDIREILKTTYCHPIMVR 113



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>Q8WUA4:TF3C2_HUMAN General transcription factor 3C polypeptide 2 - Homo sapiens|
           (Human)
          Length = 911

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = -1

Query: 173 PSQDGIARLLLQ*LFDVLSRPPQLSHRVPRCRRASLTPPELLRGGKSDKGPPRNQEP 3
           P Q+ ++RL            P LS  + +  +   + P   RGG++ KGP R Q+P
Sbjct: 71  PEQESLSRL----------EQPDLSSEMSKVSKPRASKPGRKRGGRTRKGPKRPQQP 117



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>Q8R183:TIMD2_MOUSE T-cell immunoglobulin and mucin domain-containing protein 2|
           precursor - Mus musculus (Mouse)
          Length = 305

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 6/75 (8%)
 Frame = -2

Query: 751 VCTETETDNHDRCALTQLMGKDIRKGVSLGGLPLVVEIIPGRSDGAACCFKTKPDGFHF- 575
           + T   T  H R +L QL G      +S G + L +E       G  CC    P  FHF 
Sbjct: 66  IWTNGYTVTHQRNSLYQLKGN-----ISEGNVSLTIENTVVGDGGPYCCVVEIPGAFHFV 120

Query: 574 -----ARTTVSTSVP 545
                 +  +STS P
Sbjct: 121 DYMLEVKPEISTSPP 135



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>Q8N7Y1:PRR10_HUMAN Proline-rich protein 10 - Homo sapiens (Human)|
          Length = 241

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = +3

Query: 570 RAKWKPSGLVLKQQAAPSDRPGMISTTNGSPPNETPF---LISFPMSWVSAHRSWLSVS 737
           R  WKPS    +  AA   R G+ +   G  P ET     L   P  WVSAH  WL VS
Sbjct: 23  RPCWKPS----RPGAARGGR-GLWTVGGGGSPTETAESQQLGKPPEFWVSAHPGWLQVS 76



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>Q42593:APXT_ARATH L-ascorbate peroxidase T, chloroplast precursor - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 426

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +3

Query: 99  AELRGAREDVKQLLKEKSCYPIL*R 173
           A+L  A+ED+K LL+ K C+PIL R
Sbjct: 84  AQLISAKEDIKVLLRTKFCHPILVR 108



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>O83586:Y577_TREPA Uncharacterized protein TP_0577 - Treponema pallidum|
          Length = 614

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -1

Query: 578 FCSNNRKHFRAPSYLARPLM-VH*LTLLNQTCCSHPLSAPPSPSRYRIR 435
           F S  ++H  A S+LA P    H L    +T  +  LS PP+P+R R R
Sbjct: 69  FLSARQRHPPASSFLASPAAPTHPLFATARTTAAQLLSTPPAPARPRPR 117



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>Q07351:STP4_YEAST Zinc finger protein STP4 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 490

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = -3

Query: 546 PLLSSTTTNGPLTNSFESNLLLPSPFGTSFSFKISHKAVACGSI 415
           PLLSSTT++   T S   N   P P  TS+S   S+ + AC SI
Sbjct: 55  PLLSSTTSSSRSTLSSTLNSPPPPPLTTSYS---SYNSSACQSI 95


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 147,475,833
Number of extensions: 3343484
Number of successful extensions: 8623
Number of sequences better than 10.0: 13
Number of HSP's gapped: 8616
Number of HSP's successfully gapped: 13
Length of query: 273
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 162
Effective length of database: 70,239,694
Effective search space: 11378830428
Effective search space used: 11378830428
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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