ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf174g12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P36597:THI3_SCHPO Pyrimidine precursor biosynthesis enzyme thi3 ... 29 4.2

>P36597:THI3_SCHPO Pyrimidine precursor biosynthesis enzyme thi3 - Schizosaccharomyces|
           pombe (Fission yeast)
          Length = 346
 Score = 29.3 bits (64), Expect = 4.2
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 90  GCCCYCMCLYIYH 128
           GCCC+C  LYI H
Sbjct: 193 GCCCFCTILYIAH 205


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 33,948,810
Number of extensions: 517741
Number of successful extensions: 1065
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1064
Number of HSP's successfully gapped: 1
Length of query: 88
Length of database: 100,686,439
Length adjustment: 58
Effective length of query: 30
Effective length of database: 84,777,329
Effective search space: 2543319870
Effective search space used: 2543319870
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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