ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf180m01 |
|---|---|
| Clone Library Name | barley_pub |
>Os02g0747900:Os02g0747900 | Length = 88 Score = 126 bits (317), Expect = 1e-29 Identities = 68/88 (77%), Positives = 72/88 (81%) Frame = +2 Query: 299 MSNRRSSRGAISDEEINELISKLQSLLPNSRRRGSSQASTTKLLKETCSYIKSLHREVXX 478 MS+RRSSRG+IS+EEINELISKLQSLLPNSRRRGSSQASTTKLLKETC+YIKSLHREV Sbjct: 1 MSSRRSSRGSISEEEINELISKLQSLLPNSRRRGSSQASTTKLLKETCNYIKSLHREVDD 60 Query: 479 XXXXXXXXXXXXXHNSAGAEIIRSILRS 562 HNS GAEIIRSILRS Sbjct: 61 LSDRLSDLMATMDHNSPGAEIIRSILRS 88
>AK071601:Os06g0226500 | Length = 87 Score = 118 bits (296), Expect = 4e-27 Identities = 62/87 (71%), Positives = 70/87 (80%) Frame = +2 Query: 299 MSNRRSSRGAISDEEINELISKLQSLLPNSRRRGSSQASTTKLLKETCSYIKSLHREVXX 478 MS+RRSSR ++S+EEINELISKLQSLLP+SRRRG++QASTTKLLKETCSYIKSLHREV Sbjct: 1 MSSRRSSRSSVSEEEINELISKLQSLLPSSRRRGANQASTTKLLKETCSYIKSLHREVDD 60 Query: 479 XXXXXXXXXXXXXHNSAGAEIIRSILR 559 HNS GAEIIRS+LR Sbjct: 61 LSDRLSDLMAGMDHNSPGAEIIRSLLR 87
>Os03g0171700:Os03g0171700 | Length = 91 Score = 91.3 bits (225), Expect = 6e-19 Identities = 54/91 (59%), Positives = 64/91 (70%), Gaps = 4/91 (4%) Frame = +2 Query: 299 MSNRRSSRGA---ISDEEINELISKLQSLLP-NSRRRGSSQASTTKLLKETCSYIKSLHR 466 MS+RR G I+DEEINELISKLQ+LLP +SR RG+S++S +KLLKETCSYIKSLHR Sbjct: 1 MSSRRGGGGGGGRITDEEINELISKLQALLPESSRSRGASRSSASKLLKETCSYIKSLHR 60 Query: 467 EVXXXXXXXXXXXXXXXHNSAGAEIIRSILR 559 EV +NS AEIIRS+LR Sbjct: 61 EVDDLSDRLSELMSTMDNNSPQAEIIRSLLR 91
>AK069569:Os03g0171300 | Length = 92 Score = 69.7 bits (169), Expect = 2e-12 Identities = 35/84 (41%), Positives = 55/84 (65%) Frame = +2 Query: 305 NRRSSRGAISDEEINELISKLQSLLPNSRRRGSSQASTTKLLKETCSYIKSLHREVXXXX 484 +R+S I+DE+I++L+SKLQ LLP +R R + + ++++L+ETC+YI+SLH+EV Sbjct: 8 SRQSGSSRITDEQISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCNYIRSLHQEVDDLS 67 Query: 485 XXXXXXXXXXXHNSAGAEIIRSIL 556 +SA A IIRS+L Sbjct: 68 ERLSELLATSDMSSAQAAIIRSLL 91
>AK111303:Os11g0603000 | Length = 101 Score = 49.7 bits (117), Expect = 2e-06 Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%) Frame = +2 Query: 290 RKTMSNRRSSRGAISDEEINELISKLQSLLPN-SRRRGSSQASTTKLLKETCSYIKSLHR 466 R S+R ++ +DE++ ELISKLQ++LP + QAS+ ++L+E C YI+ LHR Sbjct: 6 RSRTSSRLAAAPPPTDEQMAELISKLQAVLPTRGGEANAKQASSAEVLQEACRYIRRLHR 65 Query: 467 E 469 E Sbjct: 66 E 66
>AK120902:Os09g0487900 | Length = 401 Score = 32.7 bits (73), Expect = 0.27 Identities = 21/64 (32%), Positives = 31/64 (48%) Frame = +2 Query: 281 RLGRKTMSNRRSSRGAISDEEINELISKLQSLLPNSRRRGSSQASTTKLLKETCSYIKSL 460 R R ++ RS + I+E I KLQ L+PN + Q +T +L YIK L Sbjct: 320 RAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEK----QTNTADMLDLAVDYIKEL 375 Query: 461 HREV 472 ++V Sbjct: 376 QKQV 379
>AF465824:Os08g0506700 | Length = 149 Score = 32.0 bits (71), Expect = 0.47 Identities = 21/64 (32%), Positives = 30/64 (46%) Frame = +2 Query: 281 RLGRKTMSNRRSSRGAISDEEINELISKLQSLLPNSRRRGSSQASTTKLLKETCSYIKSL 460 R R ++ RS + I+E I KLQ L+PN Q +T +L YIK L Sbjct: 69 RAKRGCATHPRSIAERVRRTRISERIRKLQELVPNM----DKQTNTADMLDLAVDYIKDL 124 Query: 461 HREV 472 ++V Sbjct: 125 QKQV 128
>AK100106:Os08g0506700 | Length = 399 Score = 32.0 bits (71), Expect = 0.47 Identities = 21/64 (32%), Positives = 30/64 (46%) Frame = +2 Query: 281 RLGRKTMSNRRSSRGAISDEEINELISKLQSLLPNSRRRGSSQASTTKLLKETCSYIKSL 460 R R ++ RS + I+E I KLQ L+PN Q +T +L YIK L Sbjct: 319 RAKRGCATHPRSIAERVRRTRISERIRKLQELVPNM----DKQTNTADMLDLAVDYIKDL 374 Query: 461 HREV 472 ++V Sbjct: 375 QKQV 378
>AK068704:Os03g0379300 | Length = 252 Score = 32.0 bits (71), Expect = 0.47 Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 5/84 (5%) Frame = +2 Query: 233 LRPAVAS-LSSRPATQRRLGRKTMSN-RRSSRGAISDEEINELISKLQSLLPNSRRRGSS 406 +RPA A L P + ++ +K +S R + +N+L +L ++L R+ Sbjct: 13 IRPAAADKLVHGPISDKKCRKKVPRKVHKSEREKLKRGHLNDLFGELGNMLEADRQSNGK 72 Query: 407 QA---STTKLLKETCSYIKSLHRE 469 TT++L++ S +KSL +E Sbjct: 73 ACILTDTTRILRDLLSQVKSLRQE 96
>AK061515:Os03g0379300 | Length = 252 Score = 32.0 bits (71), Expect = 0.47 Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 5/84 (5%) Frame = +2 Query: 233 LRPAVAS-LSSRPATQRRLGRKTMSN-RRSSRGAISDEEINELISKLQSLLPNSRRRGSS 406 +RPA A L P + ++ +K +S R + +N+L +L ++L R+ Sbjct: 13 IRPAAADKLVHGPISDKKCRKKVPRKVHKSEREKLKRGHLNDLFGELGNMLEADRQSNGK 72 Query: 407 QA---STTKLLKETCSYIKSLHRE 469 TT++L++ S +KSL +E Sbjct: 73 ACILTDTTRILRDLLSQVKSLRQE 96
>Os09g0278000:Os09g0278000 | Length = 278 Score = 31.6 bits (70), Expect = 0.61 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = +1 Query: 265 AGDAAAARKEDDVEQKVVARRHLRRGDQRA-HLQAPVSAPQLSPPRLQP 408 A DAA ARK D + + +RH R + A H +P +AP P + QP Sbjct: 49 ARDAADARKADRIREVEATKRHAMRANAAAYHPSSPAAAPP-PPAQAQP 96
>Os07g0588400:Os07g0588400 | Length = 279 Score = 30.4 bits (67), Expect = 1.4 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 10/64 (15%) Frame = +2 Query: 311 RSSRGAISD----------EEINELISKLQSLLPNSRRRGSSQASTTKLLKETCSYIKSL 460 R++RGA +D E INE + LQ+L+PN ++ + +L+E Y+K L Sbjct: 188 RANRGAATDPQSLYARKRRERINERLRILQNLVPN-----GTKVDISTMLEEAVQYVKFL 242 Query: 461 HREV 472 ++ Sbjct: 243 QLQI 246
>AB021080:Os04g0557500 | Length = 329 Score = 30.0 bits (66), Expect = 1.8 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = +2 Query: 338 EEINELISKLQSLLPNSRRRGSSQASTTKLLKETCSYIKSLHREV 472 E++NE+ L+SLLP+ R+ +L ET +Y+K L + V Sbjct: 266 EKLNEMFLILKSLLPSVRK-----VDKASILAETITYLKVLEKRV 305
>AK102252:Os01g0286100 | Length = 731 Score = 29.6 bits (65), Expect = 2.3 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 7/80 (8%) Frame = +2 Query: 254 LSSRPATQRRLGRKTMSNRRSSRGAISD-------EEINELISKLQSLLPNSRRRGSSQA 412 L P R+ G T S +RS + + + INE + LQ L+PN ++ Sbjct: 459 LDDEPGVLRKSG--TRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPN-----CNKI 511 Query: 413 STTKLLKETCSYIKSLHREV 472 +L E Y+K+L +V Sbjct: 512 DKASMLDEAIEYLKTLQLQV 531
>Os10g0556200:Os10g0556200 | Length = 191 Score = 28.9 bits (63), Expect = 4.0 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = +2 Query: 338 EEINELISKLQSLLPNSRRRGSSQASTTKLLKETCSYIKSLHREV 472 + IN+ + LQ L+PN SS+ +L E Y+K L +V Sbjct: 15 DRINQKMKTLQKLVPN-----SSKTDKASMLDEVIDYLKQLQAQV 54
>Os09g0410700:Os09g0410700 | Length = 363 Score = 28.9 bits (63), Expect = 4.0 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 1/126 (0%) Frame = +2 Query: 95 YPAAKYP*VARRQRGPPFAHWPTARRSLSIHTVWLYLPAAVCSLC*-LRPAVASLSSRPA 271 + AA P V R+QRG A ++R PA V L L+ + +++R Sbjct: 46 FEAAAAPVVTRQQRGGAAAAEGSSRGGGG-------KPAVVSGLLGSLQAELGRVTAREI 98 Query: 272 TQRRLGRKTMSNRRSSRGAISDEEINELISKLQSLLPNSRRRGSSQASTTKLLKETCSYI 451 + + S+ + R + IN +++L+SLLPN +++ LL E ++ Sbjct: 99 MDAKALAASRSHSEAERRR--RQRINGHLARLRSLLPN-----TTKTDKASLLAEVIEHV 151 Query: 452 KSLHRE 469 K L R+ Sbjct: 152 KELKRQ 157
>D88618:Os12g0175400 | Length = 304 Score = 28.9 bits (63), Expect = 4.0 Identities = 37/109 (33%), Positives = 41/109 (37%), Gaps = 9/109 (8%) Frame = +1 Query: 256 VIPAGDAAAARKED---DVEQKVVAR---RHLRRGDQRAHLQAPVSAPQLSPPRLQPGVD 417 V P G AA +E+ V+Q R R L R +RAH QAP PR Q D Sbjct: 66 VAPQGRRVAALREELPPPVDQLPPPRPQARQLHRRGRRAHHQAP------RAPRQQVVAD 119 Query: 418 -DEAAQGDVQLHQEXXXXXXXXXXXXXXXHVDHGP--Q*RRSRDHPQHP 555 EAA D Q QE H P Q RR R P P Sbjct: 120 RREAAGEDGQRDQELLEHPHQAQAPRPRPRPAHAPPAQCRRRRRRPPPP 168
>AK106689:Os04g0618600 | Length = 181 Score = 28.9 bits (63), Expect = 4.0 Identities = 21/70 (30%), Positives = 29/70 (41%) Frame = +2 Query: 263 RPATQRRLGRKTMSNRRSSRGAISDEEINELISKLQSLLPNSRRRGSSQASTTKLLKETC 442 RP RR N R + INE + LQ LLPN ++ +L E Sbjct: 5 RPTPTRRSRSAEFHNFSERRRR---DRINEKLKALQELLPN-----CTKTDKVSMLDEAI 56 Query: 443 SYIKSLHREV 472 Y+KSL ++ Sbjct: 57 DYLKSLQLQL 66
>AK106649:Os03g0260600 | Length = 409 Score = 28.9 bits (63), Expect = 4.0 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = +2 Query: 338 EEINELISKLQSLLPNSRRRGSSQASTTKLLKETCSYIKSLHRE 469 E IN +++L+SLLPN +++ LL E ++K L R+ Sbjct: 212 ERINAHLARLRSLLPN-----TTKTDKASLLAEVIQHVKELKRQ 250
>AK063027:Os12g0175400 | Length = 295 Score = 28.9 bits (63), Expect = 4.0 Identities = 37/109 (33%), Positives = 41/109 (37%), Gaps = 9/109 (8%) Frame = +1 Query: 256 VIPAGDAAAARKED---DVEQKVVAR---RHLRRGDQRAHLQAPVSAPQLSPPRLQPGVD 417 V P G AA +E+ V+Q R R L R +RAH QAP PR Q D Sbjct: 57 VAPQGRRVAALREELPPPVDQLPPPRPQARQLHRRGRRAHHQAP------RAPRQQVVAD 110 Query: 418 -DEAAQGDVQLHQEXXXXXXXXXXXXXXXHVDHGP--Q*RRSRDHPQHP 555 EAA D Q QE H P Q RR R P P Sbjct: 111 RREAAGEDGQRDQELLEHPHQAQAPRPRPRPAHAPPAQCRRRRRRPPPP 159
>Os03g0617800:Os03g0617800 | Length = 310 Score = 28.5 bits (62), Expect = 5.2 Identities = 16/62 (25%), Positives = 32/62 (51%) Frame = +2 Query: 287 GRKTMSNRRSSRGAISDEEINELISKLQSLLPNSRRRGSSQASTTKLLKETCSYIKSLHR 466 G ++ ++ +S E INE + LQ+L+PN ++ + +L+E Y+K L Sbjct: 224 GHRSATDPQSLYARKRRERINERLKILQNLVPN-----GTKVDISTMLEEAMHYVKFLQL 278 Query: 467 EV 472 ++ Sbjct: 279 QI 280
>AK107930:Os08g0327700 | Length = 150 Score = 28.5 bits (62), Expect = 5.2 Identities = 16/54 (29%), Positives = 26/54 (48%) Frame = +1 Query: 271 DAAAARKEDDVEQKVVARRHLRRGDQRAHLQAPVSAPQLSPPRLQPGVDDEAAQ 432 DAA R+++ ++ ++H + A +A A P + PGVD AAQ Sbjct: 49 DAAEVRRQERLQAAEEEKQHAMAANAAAKERATGGAGAYHPSQGAPGVDPRAAQ 102
>AK074022:Os09g0134500 | Length = 1022 Score = 28.5 bits (62), Expect = 5.2 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = +1 Query: 286 RKEDDVEQKVVARRHLRRGDQRAHLQAPVSAPQLSPPRLQPGVDDE 423 R +D + V+ + RR ++ ++ P +P +PP L P DDE Sbjct: 42 RSAEDGKPPVIV--YYRRRRKKPRVEGPPPSPATAPPMLHPREDDE 85
>AK065095:Os09g0134500 | Length = 873 Score = 28.5 bits (62), Expect = 5.2 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = +1 Query: 286 RKEDDVEQKVVARRHLRRGDQRAHLQAPVSAPQLSPPRLQPGVDDE 423 R +D + V+ + RR ++ ++ P +P +PP L P DDE Sbjct: 42 RSAEDGKPPVIV--YYRRRRKKPRVEGPPPSPATAPPMLHPREDDE 85
>Os05g0318100:Os05g0318100 | Length = 654 Score = 28.1 bits (61), Expect = 6.8 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = +1 Query: 298 DVEQKVVARRHLRRGDQRAHLQAPVSAPQLSPPRLQPGVDDEAAQGDVQLH 450 D+EQ ++ + G HL P+S P L P R + + AQG LH Sbjct: 427 DLEQPLMVYEFIPNGTLADHLYGPLSHPPL-PWRRRLAIAHHTAQGIAYLH 476
>Os04g0351300:Os04g0351300 | Length = 1159 Score = 28.1 bits (61), Expect = 6.8 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Frame = +1 Query: 325 RHLRRGDQRAHLQ-APVSAPQLSPPRLQP 408 R LR G QR H +P S+P PPR +P Sbjct: 297 RRLRSGTQRCHAPVSPPSSPARPPPRRRP 325
>AK105713:Os01g0900800 | Length = 387 Score = 28.1 bits (61), Expect = 6.8 Identities = 20/68 (29%), Positives = 33/68 (48%) Frame = +2 Query: 269 ATQRRLGRKTMSNRRSSRGAISDEEINELISKLQSLLPNSRRRGSSQASTTKLLKETCSY 448 A + R R ++ RS I++ + KLQ L+PN + Q +T+ +L +Y Sbjct: 306 ACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDK----QTNTSDMLDIAVTY 361 Query: 449 IKSLHREV 472 IK L +V Sbjct: 362 IKELQGQV 369
>AK068254:Os01g0900800 | Length = 387 Score = 28.1 bits (61), Expect = 6.8 Identities = 20/68 (29%), Positives = 33/68 (48%) Frame = +2 Query: 269 ATQRRLGRKTMSNRRSSRGAISDEEINELISKLQSLLPNSRRRGSSQASTTKLLKETCSY 448 A + R R ++ RS I++ + KLQ L+PN + Q +T+ +L +Y Sbjct: 306 ACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDK----QTNTSDMLDIAVTY 361 Query: 449 IKSLHREV 472 IK L +V Sbjct: 362 IKELQGQV 369
>AK065864:Os05g0103000 | Length = 339 Score = 28.1 bits (61), Expect = 6.8 Identities = 20/64 (31%), Positives = 32/64 (50%) Frame = +2 Query: 281 RLGRKTMSNRRSSRGAISDEEINELISKLQSLLPNSRRRGSSQASTTKLLKETCSYIKSL 460 R G+ T S+ + R + E+I+E + LQSL+P +L E SY++SL Sbjct: 183 RRGQATDSHSLAER--VRREKISERMKMLQSLVPGC----DKVTGKALMLDEIISYVQSL 236 Query: 461 HREV 472 +V Sbjct: 237 QNQV 240
>Os07g0453000:Os07g0453000 | Length = 1079 Score = 27.7 bits (60), Expect = 8.8 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -2 Query: 658 SGWPEKPMAPPPLNRPGGLVLADLPALQYVRSRA 557 S P P APPP + P V++ PAL+ + S A Sbjct: 109 SSAPSAPAAPPPASSPPDPVVSLPPALEAILSSA 142
>Os01g0743100:Os01g0743100 | Length = 378 Score = 27.7 bits (60), Expect = 8.8 Identities = 22/85 (25%), Positives = 37/85 (43%) Frame = +2 Query: 164 ARRSLSIHTVWLYLPAAVCSLC*LRPAVASLSSRPATQRRLGRKTMSNRRSSRGAISDEE 343 AR++L + L A V + A +L A R+ + R S R ++ E Sbjct: 105 ARKALRALRSLVKLQALVRGYLVRKQAATTLHRLQALMRQQASSRAATRASYRKSMEQER 164 Query: 344 INELISKLQSLLPNSRRRGSSQAST 418 I+ ++L++ P RRR S A + Sbjct: 165 ISVEETRLKTTTPGHRRRLSDSADS 189
>AK110432: | Length = 269 Score = 27.7 bits (60), Expect = 8.8 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +2 Query: 257 SSRPATQRRLGRKTMSNRRSSRGAISD 337 ++ PAT RR+G T S+ SSRG D Sbjct: 55 AAEPATGRRMGYSTSSSSPSSRGFAGD 81 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 20,494,784 Number of extensions: 463091 Number of successful extensions: 1894 Number of sequences better than 10.0: 32 Number of HSP's gapped: 1892 Number of HSP's successfully gapped: 32 Length of query: 251 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 153 Effective length of database: 11,475,837 Effective search space: 1755803061 Effective search space used: 1755803061 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
