ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf180l12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK070664:Os10g0571100 175 4e-44
2Os03g0590700:Os03g0590700 80 2e-15
3AK122098:Os04g0624600 31 0.95
4AK059368:Os04g0624600 31 0.95

>AK070664:Os10g0571100 |
          Length = 121
 Score =  175 bits (443), Expect = 4e-44
 Identities = 90/112 (80%), Positives = 95/112 (84%), Gaps = 1/112 (0%)
 Frame = +3

Query: 24  MAAARGQKSLATLVRXXXXXXXXXX-NAPRLRHLPSLRRTFSLYDQINLIDTVPEDQLRF 200
           MAAARGQK++A L             NAPRLRHLPSLRRTFSLYDQINLID+VPEDQLRF
Sbjct: 1   MAAARGQKAVAALPHLVKSLRSEPVSNAPRLRHLPSLRRTFSLYDQINLIDSVPEDQLRF 60

Query: 201 QSYDDTGFKINNVKYEGSLLIVENKIMTWTPKTFADITAESLSIFKVVHPIP 356
           QSYDDTGF IN VKYEGSLLIVENKIMTW PK+FA+ITAESLSIFKVVHPIP
Sbjct: 61  QSYDDTGFNINKVKYEGSLLIVENKIMTWAPKSFAEITAESLSIFKVVHPIP 112



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>Os03g0590700:Os03g0590700 |
          Length = 72

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 43/60 (71%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
 Frame = +3

Query: 30  AARGQKSLATLVRXXXXXXXXXX-NAPRLRHLPSLRRTFSLYDQINLIDTVPEDQLRFQS 206
           AARGQK++A L             NAPRLRHLPSLRRTFSLYDQINLID+VPEDQLRFQS
Sbjct: 2   AARGQKAVAALPHLVKSLRSEPVSNAPRLRHLPSLRRTFSLYDQINLIDSVPEDQLRFQS 61



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>AK122098:Os04g0624600 |
          Length = 1216

 Score = 31.2 bits (69), Expect = 0.95
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +3

Query: 102  APRLRHLPSLRRTFSLYDQINLIDTVPEDQLRFQSYDDTGFKINNVKYEGSLLIVENKIM 281
            A R   +P +R+T  LYD +  +D   +D+ R Q  +  GF        G    ++  I 
Sbjct: 1118 AMRYGSIPIVRKTGGLYDTVFDVDD-DKDRAREQGLEPNGFSFEGADSNGVDYALDRAIT 1176

Query: 282  TW 287
            TW
Sbjct: 1177 TW 1178



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>AK059368:Os04g0624600 |
          Length = 426

 Score = 31.2 bits (69), Expect = 0.95
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +3

Query: 102 APRLRHLPSLRRTFSLYDQINLIDTVPEDQLRFQSYDDTGFKINNVKYEGSLLIVENKIM 281
           A R   +P +R+T  LYD +  +D   +D+ R Q  +  GF        G    ++  I 
Sbjct: 328 AMRYGSIPIVRKTGGLYDTVFDVDD-DKDRAREQGLEPNGFSFEGADSNGVDYALDRAIT 386

Query: 282 TW 287
           TW
Sbjct: 387 TW 388


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 20,851,457
Number of extensions: 432548
Number of successful extensions: 1049
Number of sequences better than 10.0: 4
Number of HSP's gapped: 1042
Number of HSP's successfully gapped: 4
Length of query: 283
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 184
Effective length of database: 11,435,796
Effective search space: 2104186464
Effective search space used: 2104186464
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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