ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf180k16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9P836:RL37_CANAL 60S ribosomal protein L37 - Candida albicans (... 52 9e-06
2Q9C0T1:RL37_EMENI 60S ribosomal protein L37 - Emericella nidulan... 52 1e-05
3P49166:RL37A_YEAST 60S ribosomal protein L37-A - Saccharomyces c... 52 2e-05
4O44125:RL37_SCHMA 60S ribosomal protein L37 - Schistosoma manson... 51 2e-05
5P51402:RL37B_YEAST 60S ribosomal protein L37-B - Saccharomyces c... 50 4e-05
6Q8LEM8:RL373_ARATH 60S ribosomal protein L37-3 - Arabidopsis tha... 50 6e-05
7Q43292:RL372_ARATH 60S ribosomal protein L37-2 - Arabidopsis tha... 50 6e-05
8Q8LFH7:RL371_ARATH 60S ribosomal protein L37-1 - Arabidopsis tha... 50 6e-05
9P05733:RL37B_SCHPO 60S ribosomal protein L37-B - Schizosaccharom... 49 1e-04
10P59289:RL37A_SCHPO 60S ribosomal protein L37-A - Schizosaccharom... 49 1e-04
11Q9VXX8:RL371_DROME Probable 60S ribosomal protein L37-A - Drosop... 49 1e-04
12Q962S7:RL37_SPOFR 60S ribosomal protein L37 - Spodoptera frugipe... 46 7e-04
13P61928:RL37_RAT 60S ribosomal protein L37 - Rattus norvegicus (Rat) 46 9e-04
14Q9D823:RL37_MOUSE 60S ribosomal protein L37 - Mus musculus (Mouse) 46 9e-04
15Q90YT1:RL37_ICTPU 60S ribosomal protein L37 - Ictalurus punctatu... 46 9e-04
16P61927:RL37_HUMAN 60S ribosomal protein L37 - Homo sapiens (Human) 46 9e-04
17P79244:RL37_BOVIN 60S ribosomal protein L37 - Bos taurus (Bovine) 46 9e-04
18Q9W1U6:RL372_DROME Probable 60S ribosomal protein L37-B - Drosop... 45 0.002
19P54011:RL37_METJA 50S ribosomal protein L37e - Methanococcus jan... 40 0.047
20P49622:RL37_CAEEL 60S ribosomal protein L37 - Caenorhabditis ele... 39 0.11
21Q9HPS3:RL37_HALSA 50S ribosomal protein L37e - Halobacterium sal... 37 0.40
22Q97BU6:RL37_THEVO 50S ribosomal protein L37e - Thermoplasma volc... 36 0.68
23Q6LY46:RL37_METMP 50S ribosomal protein L37e - Methanococcus mar... 36 0.68
24Q9HIT7:RL37_THEAC 50S ribosomal protein L37e - Thermoplasma acid... 35 1.5
25P32410:RL37_HALMA 50S ribosomal protein L37e - Haloarcula marism... 35 1.5
26P62886:RL37_LEIIN 60S ribosomal protein L37 - Leishmania infantum 35 2.0
27P62885:RL37_LEIDO 60S ribosomal protein L37 - Leishmania donovani 35 2.0
28Q4FZZ1:PXK_RAT PX domain-containing protein kinase-like protein ... 34 2.6
29Q8BX57:PXK_MOUSE PX domain-containing protein kinase-like protei... 34 2.6
30Q8TYS1:RL37_METKA 50S ribosomal protein L37e - Methanopyrus kand... 34 3.4
31Q9Y3X0:CCDC9_HUMAN Coiled-coil domain-containing protein 9 - Hom... 33 4.4
32A1CHL3:PRP28_ASPCL Pre-mRNA-splicing ATP-dependent RNA helicase ... 33 5.8
33Q7Z7A4:PXK_HUMAN PX domain-containing protein kinase-like protei... 33 7.6
34Q5JIE1:RL37_PYRKO 50S ribosomal protein L37e - Pyrococcus kodaka... 32 9.9
35O29387:RL37_ARCFU 50S ribosomal protein L37e - Archaeoglobus ful... 32 9.9
36Q6MG48:BAT2_RAT Large proline-rich protein BAT2 - Rattus norvegi... 32 9.9

>Q9P836:RL37_CANAL 60S ribosomal protein L37 - Candida albicans (Yeast)|
          Length = 88
 Score = 52.4 bits (124), Expect = 9e-06
 Identities = 21/29 (72%), Positives = 25/29 (86%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIR 977
           T+C RCGRR+FH+ K TCSSCGYPAA +R
Sbjct: 15  TLCNRCGRRSFHVQKKTCSSCGYPAAKMR 43



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>Q9C0T1:RL37_EMENI 60S ribosomal protein L37 - Emericella nidulans (Aspergillus|
           nidulans)
          Length = 92

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 20/30 (66%), Positives = 26/30 (86%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIRK 980
           T+C RCGRR++H+ KSTC++CGYPAA  RK
Sbjct: 17  TLCRRCGRRSYHIQKSTCANCGYPAAKTRK 46



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>P49166:RL37A_YEAST 60S ribosomal protein L37-A - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 88

 Score = 51.6 bits (122), Expect = 2e-05
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIR 977
           T+C RCGRR+FH+ K TCSSCGYPAA  R
Sbjct: 17  TLCNRCGRRSFHVQKKTCSSCGYPAAKTR 45



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>O44125:RL37_SCHMA 60S ribosomal protein L37 - Schistosoma mansoni (Blood fluke)|
          Length = 88

 Score = 51.2 bits (121), Expect = 2e-05
 Identities = 19/30 (63%), Positives = 25/30 (83%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIRK 980
           T C RCGR+++H+ K TCSSCGYP+A +RK
Sbjct: 17  TQCRRCGRKSYHIQKKTCSSCGYPSARLRK 46



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>P51402:RL37B_YEAST 60S ribosomal protein L37-B - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 88

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 20/29 (68%), Positives = 24/29 (82%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIR 977
           T+C RCGRR+FH+ K TCSSCGYP+A  R
Sbjct: 17  TLCNRCGRRSFHVQKKTCSSCGYPSAKTR 45



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>Q8LEM8:RL373_ARATH 60S ribosomal protein L37-3 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 95

 Score = 49.7 bits (117), Expect = 6e-05
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIR 977
           T+C+RCGRR+FH+ KS CS+C YPAA  R
Sbjct: 17  TLCVRCGRRSFHIQKSRCSACAYPAARKR 45



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>Q43292:RL372_ARATH 60S ribosomal protein L37-2 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 95

 Score = 49.7 bits (117), Expect = 6e-05
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIR 977
           T+C+RCGRR+FH+ KS CS+C YPAA  R
Sbjct: 17  TLCVRCGRRSFHIQKSRCSACAYPAARKR 45



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>Q8LFH7:RL371_ARATH 60S ribosomal protein L37-1 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 95

 Score = 49.7 bits (117), Expect = 6e-05
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIR 977
           T+C+RCGRR+FH+ KS CS+C YPAA  R
Sbjct: 17  TLCVRCGRRSFHIQKSRCSACAYPAARKR 45



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>P05733:RL37B_SCHPO 60S ribosomal protein L37-B - Schizosaccharomyces pombe (Fission|
           yeast)
          Length = 91

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIR 977
           T+C RCG+R+FH+ KSTC+ CGYPAA  R
Sbjct: 17  TICRRCGKRSFHIQKSTCACCGYPAAKTR 45



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>P59289:RL37A_SCHPO 60S ribosomal protein L37-A - Schizosaccharomyces pombe (Fission|
           yeast)
          Length = 89

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIR 977
           T+C RCG+R+FH+ KSTC+ CGYPAA  R
Sbjct: 17  TICRRCGKRSFHIQKSTCACCGYPAAKTR 45



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>Q9VXX8:RL371_DROME Probable 60S ribosomal protein L37-A - Drosophila melanogaster|
           (Fruit fly)
          Length = 93

 Score = 48.5 bits (114), Expect = 1e-04
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIR 977
           T+C RCGR ++H+ KSTC+ CGYPAA +R
Sbjct: 17  TLCRRCGRSSYHIQKSTCAQCGYPAAKLR 45



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>Q962S7:RL37_SPOFR 60S ribosomal protein L37 - Spodoptera frugiperda (Fall armyworm)|
          Length = 92

 Score = 46.2 bits (108), Expect = 7e-04
 Identities = 17/29 (58%), Positives = 23/29 (79%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIR 977
           T+C RCGR ++H+ KS C+ CGYPAA +R
Sbjct: 17  TLCRRCGRSSYHIQKSKCAQCGYPAAKLR 45



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>P61928:RL37_RAT 60S ribosomal protein L37 - Rattus norvegicus (Rat)|
          Length = 97

 Score = 45.8 bits (107), Expect = 9e-04
 Identities = 18/30 (60%), Positives = 21/30 (70%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIRK 980
           T+C RCG + +HL KSTC  CGYPA   RK
Sbjct: 17  TLCRRCGSKAYHLQKSTCGKCGYPAKRKRK 46



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>Q9D823:RL37_MOUSE 60S ribosomal protein L37 - Mus musculus (Mouse)|
          Length = 97

 Score = 45.8 bits (107), Expect = 9e-04
 Identities = 18/30 (60%), Positives = 21/30 (70%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIRK 980
           T+C RCG + +HL KSTC  CGYPA   RK
Sbjct: 17  TLCRRCGSKAYHLQKSTCGKCGYPAKRKRK 46



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>Q90YT1:RL37_ICTPU 60S ribosomal protein L37 - Ictalurus punctatus (Channel catfish)|
          Length = 97

 Score = 45.8 bits (107), Expect = 9e-04
 Identities = 18/30 (60%), Positives = 21/30 (70%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIRK 980
           T+C RCG + +HL KSTC  CGYPA   RK
Sbjct: 17  TLCRRCGSKAYHLQKSTCGKCGYPAKRKRK 46



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>P61927:RL37_HUMAN 60S ribosomal protein L37 - Homo sapiens (Human)|
          Length = 97

 Score = 45.8 bits (107), Expect = 9e-04
 Identities = 18/30 (60%), Positives = 21/30 (70%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIRK 980
           T+C RCG + +HL KSTC  CGYPA   RK
Sbjct: 17  TLCRRCGSKAYHLQKSTCGKCGYPAKRKRK 46



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>P79244:RL37_BOVIN 60S ribosomal protein L37 - Bos taurus (Bovine)|
          Length = 97

 Score = 45.8 bits (107), Expect = 9e-04
 Identities = 18/30 (60%), Positives = 21/30 (70%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIRK 980
           T+C RCG + +HL KSTC  CGYPA   RK
Sbjct: 17  TLCRRCGSKAYHLQKSTCGKCGYPAKRKRK 46



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>Q9W1U6:RL372_DROME Probable 60S ribosomal protein L37-B - Drosophila melanogaster|
           (Fruit fly)
          Length = 89

 Score = 44.7 bits (104), Expect = 0.002
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIR 977
           T+C RCG  ++HL KS CS CGYPAA  R
Sbjct: 17  TICRRCGNSSYHLQKSKCSQCGYPAAKTR 45



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>P54011:RL37_METJA 50S ribosomal protein L37e - Methanococcus jannaschii|
          Length = 61

 Score = 40.0 bits (92), Expect = 0.047
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = +3

Query: 897 CIRCGRRTFHL*KSTCSSCGYPAAHIRK 980
           C RCGRR +H+ K  C++CG+P   +RK
Sbjct: 20  CRRCGRRAYHVRKKRCAACGFPNKRMRK 47



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>P49622:RL37_CAEEL 60S ribosomal protein L37 - Caenorhabditis elegans|
          Length = 91

 Score = 38.9 bits (89), Expect = 0.11
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIR 977
           T+C RCG+ +FH+ K  C+SCGY  A  R
Sbjct: 17  TLCKRCGKSSFHIQKKRCASCGYQDAKKR 45



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>Q9HPS3:RL37_HALSA 50S ribosomal protein L37e - Halobacterium salinarium|
           (Halobacterium halobium)
          Length = 58

 Score = 37.0 bits (84), Expect = 0.40
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGYPAAHIRK 980
           T C RCG +++H  K  CSSCG+ A+  R+
Sbjct: 18  TKCRRCGEKSYHTKKKVCSSCGFGASAKRR 47



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>Q97BU6:RL37_THEVO 50S ribosomal protein L37e - Thermoplasma volcanium|
          Length = 54

 Score = 36.2 bits (82), Expect = 0.68
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 897 CIRCGRRTFHL*KSTCSSCGYPAAHIRKCK 986
           C RCG  T+++    CS CG+PA  IR  K
Sbjct: 20  CRRCGHHTYNVRTKRCSHCGFPAPRIRSYK 49



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>Q6LY46:RL37_METMP 50S ribosomal protein L37e - Methanococcus maripaludis|
          Length = 64

 Score = 36.2 bits (82), Expect = 0.68
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 894 MCIRCGRRTFHL*KSTCSSCGY 959
           +C RCGRR FH+ K  C++CG+
Sbjct: 19  VCRRCGRRAFHVRKKVCAACGF 40



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>Q9HIT7:RL37_THEAC 50S ribosomal protein L37e - Thermoplasma acidophilum|
          Length = 54

 Score = 35.0 bits (79), Expect = 1.5
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 897 CIRCGRRTFHL*KSTCSSCGYPAAHIR 977
           C RCG  T+++    CS CG+PA  IR
Sbjct: 20  CRRCGHHTYNVRTKRCSHCGFPAPRIR 46



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>P32410:RL37_HALMA 50S ribosomal protein L37e - Haloarcula marismortui (Halobacterium|
           marismortui)
          Length = 57

 Score = 35.0 bits (79), Expect = 1.5
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 891 TMCIRCGRRTFHL*KSTCSSCGY 959
           T C RCG +++H  K  CSSCG+
Sbjct: 18  TKCRRCGEKSYHTKKKVCSSCGF 40



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>P62886:RL37_LEIIN 60S ribosomal protein L37 - Leishmania infantum|
          Length = 83

 Score = 34.7 bits (78), Expect = 2.0
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 894 MCIRCGRRTFHL*KSTCSSCGYPAAHIRK 980
           +C RCGR ++H+    C++C YP A  R+
Sbjct: 18  LCRRCGRNSYHVQWERCAACAYPRASRRR 46



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>P62885:RL37_LEIDO 60S ribosomal protein L37 - Leishmania donovani|
          Length = 83

 Score = 34.7 bits (78), Expect = 2.0
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 894 MCIRCGRRTFHL*KSTCSSCGYPAAHIRK 980
           +C RCGR ++H+    C++C YP A  R+
Sbjct: 18  LCRRCGRNSYHVQWERCAACAYPRASRRR 46



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>Q4FZZ1:PXK_RAT PX domain-containing protein kinase-like protein - Rattus|
           norvegicus (Rat)
          Length = 580

 Score = 34.3 bits (77), Expect = 2.6
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -3

Query: 128 NREESVSEAPFSSDESPTPPETLASMAPLPPPSMTAPSLP 9
           N   S + +P +S  SPTPP T    + LPPP    P  P
Sbjct: 487 NSAGSGASSPLTSPSSPTPPSTAGLSSALPPPPPPPPPPP 526



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>Q8BX57:PXK_MOUSE PX domain-containing protein kinase-like protein - Mus musculus|
           (Mouse)
          Length = 582

 Score = 34.3 bits (77), Expect = 2.6
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -3

Query: 128 NREESVSEAPFSSDESPTPPETLASMAPLPPPSMTAPSLP 9
           N   S + +P +S  SPTPP T    + LPPP    P  P
Sbjct: 487 NSAGSGASSPLTSPSSPTPPSTAGLSSALPPPPPPPPPPP 526



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>Q8TYS1:RL37_METKA 50S ribosomal protein L37e - Methanopyrus kandleri|
          Length = 62

 Score = 33.9 bits (76), Expect = 3.4
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 897 CIRCGRRTFHL*KSTCSSCGY 959
           C RCGRR +H+ K  C++CG+
Sbjct: 20  CRRCGRRAYHVRKGYCAACGF 40



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>Q9Y3X0:CCDC9_HUMAN Coiled-coil domain-containing protein 9 - Homo sapiens (Human)|
          Length = 531

 Score = 33.5 bits (75), Expect = 4.4
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 137 RWLNREESVSEAPFSSDESPTPPETLASMAPLPPPSMTAPS 15
           RW  +E + S AP      PT PET     P+ PP + AP+
Sbjct: 367 RWETKEGAASPAP--ETPQPTSPETSPKETPMQPPEIPAPA 405



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>A1CHL3:PRP28_ASPCL Pre-mRNA-splicing ATP-dependent RNA helicase prp28 - Aspergillus|
           clavatus
          Length = 798

 Score = 33.1 bits (74), Expect = 5.8
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = -3

Query: 101 PFSSDESPTPPETLASMAPLPPPSMTAPSLPDE 3
           PF    +P PP    S AP PPP  +AP  P E
Sbjct: 21  PFERPPTPPPPPPEDSAAPPPPPDTSAPPPPPE 53



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>Q7Z7A4:PXK_HUMAN PX domain-containing protein kinase-like protein - Homo sapiens|
           (Human)
          Length = 578

 Score = 32.7 bits (73), Expect = 7.6
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -3

Query: 128 NREESVSEAPFSSDESPTPPETLA-SMAPLPPPSMTAPSLP 9
           N   S + +P +S  SPTPP T   S  P PPP    P+ P
Sbjct: 487 NSAGSGASSPLTSPSSPTPPSTSGISALPPPPPPPPPPAAP 527



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>Q5JIE1:RL37_PYRKO 50S ribosomal protein L37e - Pyrococcus kodakaraensis (Thermococcus|
           kodakaraensis)
          Length = 63

 Score = 32.3 bits (72), Expect = 9.9
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 897 CIRCGRRTFHL*KSTCSSCGY 959
           C RCGRR F++ K  C++CG+
Sbjct: 20  CRRCGRRAFNVKKGYCAACGF 40



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>O29387:RL37_ARCFU 50S ribosomal protein L37e - Archaeoglobus fulgidus|
          Length = 59

 Score = 32.3 bits (72), Expect = 9.9
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 897 CIRCGRRTFHL*KSTCSSCGY 959
           C RCGR +FH  K  C++CG+
Sbjct: 20  CRRCGRHSFHRRKGYCAACGF 40



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>Q6MG48:BAT2_RAT Large proline-rich protein BAT2 - Rattus norvegicus (Rat)|
          Length = 2161

 Score = 32.3 bits (72), Expect = 9.9
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -3

Query: 83   SPTPPETLASMAPLPPPSMTAPSLPD 6
            +P P ETLA++A  PPP  TA   PD
Sbjct: 1284 TPAPTETLATVAAPPPPRRTAAKSPD 1309


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 389,115,836
Number of extensions: 7821177
Number of successful extensions: 20748
Number of sequences better than 10.0: 36
Number of HSP's gapped: 20511
Number of HSP's successfully gapped: 36
Length of query: 844
Length of database: 100,686,439
Length adjustment: 122
Effective length of query: 722
Effective length of database: 67,222,449
Effective search space: 48534608178
Effective search space used: 48534608178
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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