| Clone Name | FLbaf177l06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001058017.1| Oryza sativa (japonica cultivar-group) Os03g0785300 (Os03g0785300) mRNA, partial cds Length = 577 Score = 165 bits (83), Expect = 3e-37 Identities = 113/123 (91%) Strand = Plus / Plus Query: 73 cagaatggattgggagcaacaaatggagaaaacgactatgaaccaggccttccagatttt 132 ||||||||||| |||||||||||||||||||| || | |||| |||| |||||||| ||| Sbjct: 154 cagaatggattaggagcaacaaatggagaaaatgattttgaatcaggacttccagaattt 213 Query: 133 gatcctgttaagcatcacaacagttactgtccatgggtcaatggaactgttgcagcagct 192 ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||| Sbjct: 214 gatcctgttaagcatcacaacagttactgcccatgggtaaatggaactgtggcagcagct 273 Query: 193 tgc 195 ||| Sbjct: 274 tgc 276 Score = 109 bits (55), Expect = 2e-20 Identities = 157/191 (82%) Strand = Plus / Plus Query: 214 agctcaggcagttcacaactttctggctggcagctaactgttgatgcacttgatacattc 273 |||||| | ||||||| ||||||||||||||| |||| |||||||||||||| |||||| Sbjct: 295 agctcaagtagttcaccactttctggctggcaattaacagttgatgcacttgacacattc 354 Query: 274 cagtcccttggtcagtctcaaaaccaaaccatgcggtctgaatctgcggcctcgctaaat 333 || || |||||||| ||||||| || | ||||| ||||| || || |||||| || || Sbjct: 355 caatctcttggtcaagctcaaaatcatgctatgcgatctgattccgcagcctcgttatat 414 Query: 334 atggatgatcaagcagcttcaaactgcaagctggcgagaaggacttcagtgaacaaaagc 393 ||||||||||| | | || | ||| |||||| || |||||| | ||||||| || |||| Sbjct: 415 atggatgatcatgtaactcctaaccacaagctcgccagaagggcatcagtgagcagaagc 474 Query: 394 catgggaaatg 404 ||||||||||| Sbjct: 475 catgggaaatg 485 Score = 46.1 bits (23), Expect = 0.22 Identities = 29/31 (93%) Strand = Plus / Plus Query: 3 atctaaagaggaagtgacgcaggttggcaaa 33 |||||||||||||||||| |||| ||||||| Sbjct: 78 atctaaagaggaagtgacacaggctggcaaa 108
>dbj|AK102218.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L08, full insert sequence Length = 3325 Score = 165 bits (83), Expect = 3e-37 Identities = 113/123 (91%) Strand = Plus / Plus Query: 73 cagaatggattgggagcaacaaatggagaaaacgactatgaaccaggccttccagatttt 132 ||||||||||| |||||||||||||||||||| || | |||| |||| |||||||| ||| Sbjct: 2579 cagaatggattaggagcaacaaatggagaaaatgattttgaatcaggacttccagaattt 2638 Query: 133 gatcctgttaagcatcacaacagttactgtccatgggtcaatggaactgttgcagcagct 192 ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||| Sbjct: 2639 gatcctgttaagcatcacaacagttactgcccatgggtaaatggaactgtggcagcagct 2698 Query: 193 tgc 195 ||| Sbjct: 2699 tgc 2701 Score = 109 bits (55), Expect = 2e-20 Identities = 157/191 (82%) Strand = Plus / Plus Query: 214 agctcaggcagttcacaactttctggctggcagctaactgttgatgcacttgatacattc 273 |||||| | ||||||| ||||||||||||||| |||| |||||||||||||| |||||| Sbjct: 2720 agctcaagtagttcaccactttctggctggcaattaacagttgatgcacttgacacattc 2779 Query: 274 cagtcccttggtcagtctcaaaaccaaaccatgcggtctgaatctgcggcctcgctaaat 333 || || |||||||| ||||||| || | ||||| ||||| || || |||||| || || Sbjct: 2780 caatctcttggtcaagctcaaaatcatgctatgcgatctgattccgcagcctcgttatat 2839 Query: 334 atggatgatcaagcagcttcaaactgcaagctggcgagaaggacttcagtgaacaaaagc 393 ||||||||||| | | || | ||| |||||| || |||||| | ||||||| || |||| Sbjct: 2840 atggatgatcatgtaactcctaaccacaagctcgccagaagggcatcagtgagcagaagc 2899 Query: 394 catgggaaatg 404 ||||||||||| Sbjct: 2900 catgggaaatg 2910 Score = 46.1 bits (23), Expect = 0.22 Identities = 29/31 (93%) Strand = Plus / Plus Query: 3 atctaaagaggaagtgacgcaggttggcaaa 33 |||||||||||||||||| |||| ||||||| Sbjct: 2503 atctaaagaggaagtgacacaggctggcaaa 2533
>dbj|AK063754.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-A04, full insert sequence Length = 577 Score = 165 bits (83), Expect = 3e-37 Identities = 113/123 (91%) Strand = Plus / Plus Query: 73 cagaatggattgggagcaacaaatggagaaaacgactatgaaccaggccttccagatttt 132 ||||||||||| |||||||||||||||||||| || | |||| |||| |||||||| ||| Sbjct: 154 cagaatggattaggagcaacaaatggagaaaatgattttgaatcaggacttccagaattt 213 Query: 133 gatcctgttaagcatcacaacagttactgtccatgggtcaatggaactgttgcagcagct 192 ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||| Sbjct: 214 gatcctgttaagcatcacaacagttactgcccatgggtaaatggaactgtggcagcagct 273 Query: 193 tgc 195 ||| Sbjct: 274 tgc 276 Score = 109 bits (55), Expect = 2e-20 Identities = 157/191 (82%) Strand = Plus / Plus Query: 214 agctcaggcagttcacaactttctggctggcagctaactgttgatgcacttgatacattc 273 |||||| | ||||||| ||||||||||||||| |||| |||||||||||||| |||||| Sbjct: 295 agctcaagtagttcaccactttctggctggcaattaacagttgatgcacttgacacattc 354 Query: 274 cagtcccttggtcagtctcaaaaccaaaccatgcggtctgaatctgcggcctcgctaaat 333 || || |||||||| ||||||| || | ||||| ||||| || || |||||| || || Sbjct: 355 caatctcttggtcaagctcaaaatcatgctatgcgatctgattccgcagcctcgttatat 414 Query: 334 atggatgatcaagcagcttcaaactgcaagctggcgagaaggacttcagtgaacaaaagc 393 ||||||||||| | | || | ||| |||||| || |||||| | ||||||| || |||| Sbjct: 415 atggatgatcatgtaactcctaaccacaagctcgccagaagggcatcagtgagcagaagc 474 Query: 394 catgggaaatg 404 ||||||||||| Sbjct: 475 catgggaaatg 485 Score = 46.1 bits (23), Expect = 0.22 Identities = 29/31 (93%) Strand = Plus / Plus Query: 3 atctaaagaggaagtgacgcaggttggcaaa 33 |||||||||||||||||| |||| ||||||| Sbjct: 78 atctaaagaggaagtgacacaggctggcaaa 108
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 149 bits (75), Expect = 2e-32 Identities = 102/111 (91%) Strand = Plus / Minus Query: 85 ggagcaacaaatggagaaaacgactatgaaccaggccttccagattttgatcctgttaag 144 |||||||||||||||||||| || | |||| |||| |||||||| ||||||||||||||| Sbjct: 22517 ggagcaacaaatggagaaaatgattttgaatcaggacttccagaatttgatcctgttaag 22458 Query: 145 catcacaacagttactgtccatgggtcaatggaactgttgcagcagcttgc 195 ||||||||||||||||| |||||||| ||||||||||| |||||||||||| Sbjct: 22457 catcacaacagttactgcccatgggtaaatggaactgtggcagcagcttgc 22407 Score = 79.8 bits (40), Expect = 2e-11 Identities = 103/124 (83%) Strand = Plus / Minus Query: 214 agctcaggcagttcacaactttctggctggcagctaactgttgatgcacttgatacattc 273 |||||| | ||||||| ||||||||||||||| |||| |||||||||||||| |||||| Sbjct: 22388 agctcaagtagttcaccactttctggctggcaattaacagttgatgcacttgacacattc 22329 Query: 274 cagtcccttggtcagtctcaaaaccaaaccatgcggtctgaatctgcggcctcgctaaat 333 || || |||||||| ||||||| || | ||||| ||||| || || |||||| || || Sbjct: 22328 caatctcttggtcaagctcaaaatcatgctatgcgatctgattccgcagcctcgttatat 22269 Query: 334 atgg 337 |||| Sbjct: 22268 atgg 22265 Score = 46.1 bits (23), Expect = 0.22 Identities = 29/31 (93%) Strand = Plus / Minus Query: 3 atctaaagaggaagtgacgcaggttggcaaa 33 |||||||||||||||||| |||| ||||||| Sbjct: 23123 atctaaagaggaagtgacacaggctggcaaa 23093 Score = 42.1 bits (21), Expect = 3.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 360 caagctggcgagaaggacttcagtgaacaaaagccatgggaaatg 404 |||||| || |||||| | ||||||| || ||||||||||||||| Sbjct: 22050 caagctcgccagaagggcatcagtgagcagaagccatgggaaatg 22006
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 149 bits (75), Expect = 2e-32 Identities = 102/111 (91%) Strand = Plus / Minus Query: 85 ggagcaacaaatggagaaaacgactatgaaccaggccttccagattttgatcctgttaag 144 |||||||||||||||||||| || | |||| |||| |||||||| ||||||||||||||| Sbjct: 32379260 ggagcaacaaatggagaaaatgattttgaatcaggacttccagaatttgatcctgttaag 32379201 Query: 145 catcacaacagttactgtccatgggtcaatggaactgttgcagcagcttgc 195 ||||||||||||||||| |||||||| ||||||||||| |||||||||||| Sbjct: 32379200 catcacaacagttactgcccatgggtaaatggaactgtggcagcagcttgc 32379150 Score = 79.8 bits (40), Expect = 2e-11 Identities = 103/124 (83%) Strand = Plus / Minus Query: 214 agctcaggcagttcacaactttctggctggcagctaactgttgatgcacttgatacattc 273 |||||| | ||||||| ||||||||||||||| |||| |||||||||||||| |||||| Sbjct: 32379131 agctcaagtagttcaccactttctggctggcaattaacagttgatgcacttgacacattc 32379072 Query: 274 cagtcccttggtcagtctcaaaaccaaaccatgcggtctgaatctgcggcctcgctaaat 333 || || |||||||| ||||||| || | ||||| ||||| || || |||||| || || Sbjct: 32379071 caatctcttggtcaagctcaaaatcatgctatgcgatctgattccgcagcctcgttatat 32379012 Query: 334 atgg 337 |||| Sbjct: 32379011 atgg 32379008 Score = 46.1 bits (23), Expect = 0.22 Identities = 29/31 (93%) Strand = Plus / Minus Query: 3 atctaaagaggaagtgacgcaggttggcaaa 33 |||||||||||||||||| |||| ||||||| Sbjct: 32379866 atctaaagaggaagtgacacaggctggcaaa 32379836 Score = 42.1 bits (21), Expect = 3.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 360 caagctggcgagaaggacttcagtgaacaaaagccatgggaaatg 404 |||||| || |||||| | ||||||| || ||||||||||||||| Sbjct: 32378793 caagctcgccagaagggcatcagtgagcagaagccatgggaaatg 32378749
>emb|AJ234648.1|HVU234648 Hordeum vulgare genomic DNA fragment; clone MWG0922.uni Length = 373 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 847 tcacccttgaccttgggaataaagaatttagttc 880 |||||||||||||||||| |||||| |||||||| Sbjct: 373 tcacccttgaccttgggattaaagattttagttc 340
>emb|X74443.2|RVNUCPROA Peste-des-petits-ruminants virus complete genome Length = 15948 Score = 46.1 bits (23), Expect = 0.22 Identities = 23/23 (100%) Strand = Plus / Minus Query: 261 acttgatacattccagtcccttg 283 ||||||||||||||||||||||| Sbjct: 1858 acttgatacattccagtcccttg 1836
>emb|AJ298897.2|PDE298897 Peste-des-petits-ruminants virus mRNA for phosphoprotein (p gene) Length = 1655 Score = 46.1 bits (23), Expect = 0.22 Identities = 23/23 (100%) Strand = Plus / Minus Query: 261 acttgatacattccagtcccttg 283 ||||||||||||||||||||||| Sbjct: 111 acttgatacattccagtcccttg 89
>ref|XR_026541.1| PREDICTED: Strongylocentrotus purpuratus similar to axonemal dynein heavy chain 7 (LOC581061), mRNA Length = 12743 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 tccagattttgatcctgttaag 144 |||||||||||||||||||||| Sbjct: 8439 tccagattttgatcctgttaag 8460
>ref|XR_026449.1| PREDICTED: Strongylocentrotus purpuratus similar to axonemal dynein heavy chain 7 (LOC581061), mRNA Length = 12743 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 tccagattttgatcctgttaag 144 |||||||||||||||||||||| Sbjct: 8439 tccagattttgatcctgttaag 8460
>gb|AF265664.1| Solanum tuberosum resistance gene cluster, complete sequence Length = 187352 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 aatggattgggagcaacaaatg 97 |||||||||||||||||||||| Sbjct: 95047 aatggattgggagcaacaaatg 95068 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 76 aatggattgggagcaacaaatg 97 |||||||||||||||||||||| Sbjct: 143887 aatggattgggagcaacaaatg 143908
>emb|CR388207.13| Zebrafish DNA sequence from clone CH211-28E16 in linkage group 23, complete sequence Length = 191838 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 123492 cagtgattttactgtctttat 123472
>ref|NM_001065435.1| Oryza sativa (japonica cultivar-group) Os07g0150500 (Os07g0150500) mRNA, complete cds Length = 3249 Score = 42.1 bits (21), Expect = 3.4 Identities = 75/93 (80%) Strand = Plus / Plus Query: 231 actttctggctggcagctaactgttgatgcacttgatacattccagtcccttggtcagtc 290 |||||| ||||||||||| || || |||||||| || || ||||||| |||| ||| | Sbjct: 2737 actttccggctggcagcttacagtagatgcactggaaactatccagtctcttgctcaagc 2796 Query: 291 tcaaaaccaaaccatgcggtctgaatctgcggc 323 ||||| |||| |||| |||||| |||||||| Sbjct: 2797 ccaaaatcaaattatgccgtctgactctgcggc 2829
>emb|CR589875.9| Zebrafish DNA sequence from clone DKEY-15K16 in linkage group 11, complete sequence Length = 223329 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 88637 cagtgattttactgtctttat 88657
>emb|CT033808.5| Zebrafish DNA sequence from clone CH211-105H17 in linkage group 1, complete sequence Length = 68463 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 36034 cagtgattttactgtctttat 36054
>emb|CR407546.16| Zebrafish DNA sequence from clone CH211-276E3 in linkage group 17, complete sequence Length = 103614 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 70944 cagtgattttactgtctttat 70924
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 3.4 Identities = 75/93 (80%) Strand = Plus / Minus Query: 231 actttctggctggcagctaactgttgatgcacttgatacattccagtcccttggtcagtc 290 |||||| ||||||||||| || || |||||||| || || ||||||| |||| ||| | Sbjct: 2667287 actttccggctggcagcttacagtagatgcactggaaactatccagtctcttgctcaagc 2667228 Query: 291 tcaaaaccaaaccatgcggtctgaatctgcggc 323 ||||| |||| |||| |||||| |||||||| Sbjct: 2667227 ccaaaatcaaattatgccgtctgactctgcggc 2667195
>emb|AL031294.1|HS885E17 Human DNA sequence from clone RP5-885E17 on chromosome 1p33-34.1 Contains the 5' end of a novel gene, complete sequence Length = 83957 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 731 agaattttgcaagtgaattga 751 ||||||||||||||||||||| Sbjct: 20113 agaattttgcaagtgaattga 20093
>gb|AC020925.8| Homo sapiens chromosome 5 clone CTD-2134K2, complete sequence Length = 161452 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 505 atttacatgcagtgctgctgc 525 ||||||||||||||||||||| Sbjct: 144602 atttacatgcagtgctgctgc 144622
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 gaagaaaacaagttaataatc 587 ||||||||||||||||||||| Sbjct: 38402 gaagaaaacaagttaataatc 38382
>emb|AL590149.9| Zebrafish DNA sequence from clone RP71-36D5 in linkage group 17 Contains the 3' part of a novel gene similar to KIAA0953, a novel gene similar to POMC (propiomelanocortin), a novel gene similar to FCN2 (ficolin 2), a novel gene similar to SNX9 (sorting nexin 9) and a CpG island, complete sequence Length = 167272 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 61172 cagtgattttactgtctttat 61152
>emb|AL645809.8| Mouse DNA sequence from clone RP23-402D13 on chromosome 11 Contains the 5' end of the Tisp78 gene for transcript increased in spermiogenesis 78, the Epn3 gene for epsin 3, the Mycbpap gene for mycbp associated protein, the gene for a novel protein (B430319G23Rik), the 5' end of the gene for a novel protein (9330162N21Rik) and the Chad gene for chondroadherin, complete sequence Length = 106815 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 cagtcccttggtcagtctcaa 294 ||||||||||||||||||||| Sbjct: 66685 cagtcccttggtcagtctcaa 66705
>emb|BX664744.10| Zebrafish DNA sequence from clone CH211-226F3 in linkage group 8, complete sequence Length = 3967 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 3054 cagtgattttactgtctttat 3034
>emb|BX511266.14| Zebrafish DNA sequence from clone CH211-245D7 in linkage group 14, complete sequence Length = 160419 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 142321 cagtgattttactgtctttat 142341
>emb|CR626864.10| Zebrafish DNA sequence from clone DKEY-156N14 in linkage group 2, complete sequence Length = 173100 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 19058 cagtgattttactgtctttat 19038
>emb|CR394529.7| Zebrafish DNA sequence from clone CH211-121F17 in linkage group 24, complete sequence Length = 75984 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 70209 cagtgattttactgtctttat 70189
>emb|CR405703.5| Zebrafish DNA sequence from clone DKEYP-52E4 in linkage group 5, complete sequence Length = 81891 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 26235 cagtgattttactgtctttat 26255
>gb|AC010468.5|AC010468 Homo sapiens chromosome 5 clone CTD-2290C20, complete sequence Length = 122102 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 505 atttacatgcagtgctgctgc 525 ||||||||||||||||||||| Sbjct: 47251 atttacatgcagtgctgctgc 47231
>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1027_G06 Length = 121885 Score = 42.1 bits (21), Expect = 3.4 Identities = 75/93 (80%) Strand = Plus / Minus Query: 231 actttctggctggcagctaactgttgatgcacttgatacattccagtcccttggtcagtc 290 |||||| ||||||||||| || || |||||||| || || ||||||| |||| ||| | Sbjct: 93005 actttccggctggcagcttacagtagatgcactggaaactatccagtctcttgctcaagc 92946 Query: 291 tcaaaaccaaaccatgcggtctgaatctgcggc 323 ||||| |||| |||| |||||| |||||||| Sbjct: 92945 ccaaaatcaaattatgccgtctgactctgcggc 92913
>emb|BX511253.13| Zebrafish DNA sequence from clone DKEY-45M5 in linkage group 8, complete sequence Length = 216373 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 1141 cagtgattttactgtctttat 1121
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 567 gaagaaaacaagttaataatc 587 ||||||||||||||||||||| Sbjct: 40191 gaagaaaacaagttaataatc 40171
>emb|BX321868.13| Zebrafish DNA sequence from clone RP71-41I21, complete sequence Length = 135717 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 2990 cagtgattttactgtctttat 3010
>emb|BX324110.10| Zebrafish DNA sequence from clone DKEY-250F19 in linkage group 3, complete sequence Length = 103014 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 49569 cagtgattttactgtctttat 49549
>emb|BX324146.10| Zebrafish DNA sequence from clone CH211-207C15 in linkage group 19, complete sequence Length = 230267 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 224457 cagtgattttactgtctttat 224437
>emb|BX284110.16| Zebrafish DNA sequence from clone DKEYP-67D7 in linkage group 10, complete sequence Length = 179798 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 32657 cagtgattttactgtctttat 32637
>dbj|AK073749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070M17, full insert sequence Length = 3250 Score = 42.1 bits (21), Expect = 3.4 Identities = 75/93 (80%) Strand = Plus / Plus Query: 231 actttctggctggcagctaactgttgatgcacttgatacattccagtcccttggtcagtc 290 |||||| ||||||||||| || || |||||||| || || ||||||| |||| ||| | Sbjct: 2738 actttccggctggcagcttacagtagatgcactggaaactatccagtctcttgctcaagc 2797 Query: 291 tcaaaaccaaaccatgcggtctgaatctgcggc 323 ||||| |||| |||| |||||| |||||||| Sbjct: 2798 ccaaaatcaaattatgccgtctgactctgcggc 2830
>emb|AL953910.14| Zebrafish DNA sequence from clone DKEY-31E10 in linkage group 1, complete sequence Length = 190793 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 181360 cagtgattttactgtctttat 181340
>emb|BX088528.7| Zebrafish DNA sequence from clone CH211-226D23 in linkage group 1, complete sequence Length = 171618 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 153933 cagtgattttactgtctttat 153913
>emb|AL954634.12| Zebrafish DNA sequence from clone DKEY-58C20 in linkage group 14, complete sequence Length = 195499 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 117952 cagtgattttactgtctttat 117972
>emb|BX004756.7| Zebrafish DNA sequence from clone CH211-59A4 in linkage group 1, complete sequence Length = 169530 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 116704 cagtgattttactgtctttat 116724
>emb|AL929031.3| Zebrafish DNA sequence from clone CH211-255L18 in linkage group 17, complete sequence Length = 187548 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 5771 cagtgattttactgtctttat 5751
>emb|BX004829.12| Zebrafish DNA sequence from clone DKEY-29O15, complete sequence Length = 231581 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 4737 cagtgattttactgtctttat 4717
>emb|AL929299.10| Zebrafish DNA sequence from clone BUSM1-SL6, complete sequence Length = 72631 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 11866 cagtgattttactgtctttat 11886
>emb|AL953859.7| Zebrafish DNA sequence from clone DKEY-53P21, complete sequence Length = 203360 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 155642 cagtgattttactgtctttat 155662
>gb|AC124180.5| Mus musculus BAC clone RP23-200I16 from 16, complete sequence Length = 199422 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 gaacaaaagccatgggaaatg 404 ||||||||||||||||||||| Sbjct: 70617 gaacaaaagccatgggaaatg 70597
>emb|AL935277.6| Zebrafish DNA sequence from clone CH211-250C16, complete sequence Length = 69315 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 658 cagtgattttactgtctttat 678 ||||||||||||||||||||| Sbjct: 30457 cagtgattttactgtctttat 30437 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 171,751,030 Number of extensions: 9134724 Number of successful extensions: 180989 Number of sequences better than 10.0: 46 Number of HSP's gapped: 180986 Number of HSP's successfully gapped: 59 Length of query: 895 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 872 Effective length of database: 18,503,978,556 Effective search space: 16135469300832 Effective search space used: 16135469300832 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)