ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf177l06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_001058017.1| Oryza sativa (japonica cultivar-group) Os03g... 165 3e-37
2dbj|AK102218.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 3e-37
3dbj|AK063754.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 3e-37
4gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17... 149 2e-32
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 149 2e-32
6emb|AJ234648.1|HVU234648 Hordeum vulgare genomic DNA fragment; c... 52 0.003
7emb|X74443.2|RVNUCPROA Peste-des-petits-ruminants virus complete... 46 0.22
8emb|AJ298897.2|PDE298897 Peste-des-petits-ruminants virus mRNA f... 46 0.22
9ref|XR_026541.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.85
10ref|XR_026449.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.85
11gb|AF265664.1| Solanum tuberosum resistance gene cluster, comple... 44 0.85
12emb|CR388207.13| Zebrafish DNA sequence from clone CH211-28E16 i... 42 3.4
13ref|NM_001065435.1| Oryza sativa (japonica cultivar-group) Os07g... 42 3.4
14emb|CR589875.9| Zebrafish DNA sequence from clone DKEY-15K16 in ... 42 3.4
15emb|CT033808.5| Zebrafish DNA sequence from clone CH211-105H17 i... 42 3.4
16emb|CR407546.16| Zebrafish DNA sequence from clone CH211-276E3 i... 42 3.4
17dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 3.4
18emb|AL031294.1|HS885E17 Human DNA sequence from clone RP5-885E17... 42 3.4
19gb|AC020925.8| Homo sapiens chromosome 5 clone CTD-2134K2, compl... 42 3.4
20emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 42 3.4
21emb|AL590149.9| Zebrafish DNA sequence from clone RP71-36D5 in l... 42 3.4
22emb|AL645809.8| Mouse DNA sequence from clone RP23-402D13 on chr... 42 3.4
23emb|BX664744.10| Zebrafish DNA sequence from clone CH211-226F3 i... 42 3.4
24emb|BX511266.14| Zebrafish DNA sequence from clone CH211-245D7 i... 42 3.4
25emb|CR626864.10| Zebrafish DNA sequence from clone DKEY-156N14 i... 42 3.4
26emb|CR394529.7| Zebrafish DNA sequence from clone CH211-121F17 i... 42 3.4
27emb|CR405703.5| Zebrafish DNA sequence from clone DKEYP-52E4 in ... 42 3.4
28gb|AC010468.5|AC010468 Homo sapiens chromosome 5 clone CTD-2290C... 42 3.4
29dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic D... 42 3.4
30emb|BX511253.13| Zebrafish DNA sequence from clone DKEY-45M5 in ... 42 3.4
31dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 42 3.4
32emb|BX321868.13| Zebrafish DNA sequence from clone RP71-41I21, c... 42 3.4
33emb|BX324110.10| Zebrafish DNA sequence from clone DKEY-250F19 i... 42 3.4
34emb|BX324146.10| Zebrafish DNA sequence from clone CH211-207C15 ... 42 3.4
35emb|BX284110.16| Zebrafish DNA sequence from clone DKEYP-67D7 in... 42 3.4
36dbj|AK073749.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 3.4
37emb|AL953910.14| Zebrafish DNA sequence from clone DKEY-31E10 in... 42 3.4
38emb|BX088528.7| Zebrafish DNA sequence from clone CH211-226D23 i... 42 3.4
39emb|AL954634.12| Zebrafish DNA sequence from clone DKEY-58C20 in... 42 3.4
40emb|BX004756.7| Zebrafish DNA sequence from clone CH211-59A4 in ... 42 3.4
41emb|AL929031.3| Zebrafish DNA sequence from clone CH211-255L18 i... 42 3.4
42emb|BX004829.12| Zebrafish DNA sequence from clone DKEY-29O15, c... 42 3.4
43emb|AL929299.10| Zebrafish DNA sequence from clone BUSM1-SL6, co... 42 3.4
44emb|AL953859.7| Zebrafish DNA sequence from clone DKEY-53P21, co... 42 3.4
45gb|AC124180.5| Mus musculus BAC clone RP23-200I16 from 16, compl... 42 3.4
46emb|AL935277.6| Zebrafish DNA sequence from clone CH211-250C16, ... 42 3.4

>ref|NM_001058017.1| Oryza sativa (japonica cultivar-group) Os03g0785300 (Os03g0785300)
           mRNA, partial cds
          Length = 577
 Score =  165 bits (83), Expect = 3e-37
 Identities = 113/123 (91%)
 Strand = Plus / Plus

                                                                       
Query: 73  cagaatggattgggagcaacaaatggagaaaacgactatgaaccaggccttccagatttt 132
           ||||||||||| |||||||||||||||||||| || | |||| |||| |||||||| |||
Sbjct: 154 cagaatggattaggagcaacaaatggagaaaatgattttgaatcaggacttccagaattt 213

                                                                       
Query: 133 gatcctgttaagcatcacaacagttactgtccatgggtcaatggaactgttgcagcagct 192
           ||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 214 gatcctgttaagcatcacaacagttactgcccatgggtaaatggaactgtggcagcagct 273

              
Query: 193 tgc 195
           |||
Sbjct: 274 tgc 276



 Score =  109 bits (55), Expect = 2e-20
 Identities = 157/191 (82%)
 Strand = Plus / Plus

                                                                       
Query: 214 agctcaggcagttcacaactttctggctggcagctaactgttgatgcacttgatacattc 273
           |||||| | ||||||| |||||||||||||||  |||| |||||||||||||| ||||||
Sbjct: 295 agctcaagtagttcaccactttctggctggcaattaacagttgatgcacttgacacattc 354

                                                                       
Query: 274 cagtcccttggtcagtctcaaaaccaaaccatgcggtctgaatctgcggcctcgctaaat 333
           || || ||||||||  ||||||| ||  | ||||| ||||| || || |||||| || ||
Sbjct: 355 caatctcttggtcaagctcaaaatcatgctatgcgatctgattccgcagcctcgttatat 414

                                                                       
Query: 334 atggatgatcaagcagcttcaaactgcaagctggcgagaaggacttcagtgaacaaaagc 393
           ||||||||||| | | || | |||  |||||| || |||||| | ||||||| || ||||
Sbjct: 415 atggatgatcatgtaactcctaaccacaagctcgccagaagggcatcagtgagcagaagc 474

                      
Query: 394 catgggaaatg 404
           |||||||||||
Sbjct: 475 catgggaaatg 485



 Score = 46.1 bits (23), Expect = 0.22
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 3   atctaaagaggaagtgacgcaggttggcaaa 33
           |||||||||||||||||| |||| |||||||
Sbjct: 78  atctaaagaggaagtgacacaggctggcaaa 108



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>dbj|AK102218.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L08, full
            insert sequence
          Length = 3325

 Score =  165 bits (83), Expect = 3e-37
 Identities = 113/123 (91%)
 Strand = Plus / Plus

                                                                        
Query: 73   cagaatggattgggagcaacaaatggagaaaacgactatgaaccaggccttccagatttt 132
            ||||||||||| |||||||||||||||||||| || | |||| |||| |||||||| |||
Sbjct: 2579 cagaatggattaggagcaacaaatggagaaaatgattttgaatcaggacttccagaattt 2638

                                                                        
Query: 133  gatcctgttaagcatcacaacagttactgtccatgggtcaatggaactgttgcagcagct 192
            ||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 2639 gatcctgttaagcatcacaacagttactgcccatgggtaaatggaactgtggcagcagct 2698

               
Query: 193  tgc 195
            |||
Sbjct: 2699 tgc 2701



 Score =  109 bits (55), Expect = 2e-20
 Identities = 157/191 (82%)
 Strand = Plus / Plus

                                                                        
Query: 214  agctcaggcagttcacaactttctggctggcagctaactgttgatgcacttgatacattc 273
            |||||| | ||||||| |||||||||||||||  |||| |||||||||||||| ||||||
Sbjct: 2720 agctcaagtagttcaccactttctggctggcaattaacagttgatgcacttgacacattc 2779

                                                                        
Query: 274  cagtcccttggtcagtctcaaaaccaaaccatgcggtctgaatctgcggcctcgctaaat 333
            || || ||||||||  ||||||| ||  | ||||| ||||| || || |||||| || ||
Sbjct: 2780 caatctcttggtcaagctcaaaatcatgctatgcgatctgattccgcagcctcgttatat 2839

                                                                        
Query: 334  atggatgatcaagcagcttcaaactgcaagctggcgagaaggacttcagtgaacaaaagc 393
            ||||||||||| | | || | |||  |||||| || |||||| | ||||||| || ||||
Sbjct: 2840 atggatgatcatgtaactcctaaccacaagctcgccagaagggcatcagtgagcagaagc 2899

                       
Query: 394  catgggaaatg 404
            |||||||||||
Sbjct: 2900 catgggaaatg 2910



 Score = 46.1 bits (23), Expect = 0.22
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 3    atctaaagaggaagtgacgcaggttggcaaa 33
            |||||||||||||||||| |||| |||||||
Sbjct: 2503 atctaaagaggaagtgacacaggctggcaaa 2533



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>dbj|AK063754.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-A04, full
           insert sequence
          Length = 577

 Score =  165 bits (83), Expect = 3e-37
 Identities = 113/123 (91%)
 Strand = Plus / Plus

                                                                       
Query: 73  cagaatggattgggagcaacaaatggagaaaacgactatgaaccaggccttccagatttt 132
           ||||||||||| |||||||||||||||||||| || | |||| |||| |||||||| |||
Sbjct: 154 cagaatggattaggagcaacaaatggagaaaatgattttgaatcaggacttccagaattt 213

                                                                       
Query: 133 gatcctgttaagcatcacaacagttactgtccatgggtcaatggaactgttgcagcagct 192
           ||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 214 gatcctgttaagcatcacaacagttactgcccatgggtaaatggaactgtggcagcagct 273

              
Query: 193 tgc 195
           |||
Sbjct: 274 tgc 276



 Score =  109 bits (55), Expect = 2e-20
 Identities = 157/191 (82%)
 Strand = Plus / Plus

                                                                       
Query: 214 agctcaggcagttcacaactttctggctggcagctaactgttgatgcacttgatacattc 273
           |||||| | ||||||| |||||||||||||||  |||| |||||||||||||| ||||||
Sbjct: 295 agctcaagtagttcaccactttctggctggcaattaacagttgatgcacttgacacattc 354

                                                                       
Query: 274 cagtcccttggtcagtctcaaaaccaaaccatgcggtctgaatctgcggcctcgctaaat 333
           || || ||||||||  ||||||| ||  | ||||| ||||| || || |||||| || ||
Sbjct: 355 caatctcttggtcaagctcaaaatcatgctatgcgatctgattccgcagcctcgttatat 414

                                                                       
Query: 334 atggatgatcaagcagcttcaaactgcaagctggcgagaaggacttcagtgaacaaaagc 393
           ||||||||||| | | || | |||  |||||| || |||||| | ||||||| || ||||
Sbjct: 415 atggatgatcatgtaactcctaaccacaagctcgccagaagggcatcagtgagcagaagc 474

                      
Query: 394 catgggaaatg 404
           |||||||||||
Sbjct: 475 catgggaaatg 485



 Score = 46.1 bits (23), Expect = 0.22
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 3   atctaaagaggaagtgacgcaggttggcaaa 33
           |||||||||||||||||| |||| |||||||
Sbjct: 78  atctaaagaggaagtgacacaggctggcaaa 108



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>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence
          Length = 102751

 Score =  149 bits (75), Expect = 2e-32
 Identities = 102/111 (91%)
 Strand = Plus / Minus

                                                                         
Query: 85    ggagcaacaaatggagaaaacgactatgaaccaggccttccagattttgatcctgttaag 144
             |||||||||||||||||||| || | |||| |||| |||||||| |||||||||||||||
Sbjct: 22517 ggagcaacaaatggagaaaatgattttgaatcaggacttccagaatttgatcctgttaag 22458

                                                                
Query: 145   catcacaacagttactgtccatgggtcaatggaactgttgcagcagcttgc 195
             ||||||||||||||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 22457 catcacaacagttactgcccatgggtaaatggaactgtggcagcagcttgc 22407



 Score = 79.8 bits (40), Expect = 2e-11
 Identities = 103/124 (83%)
 Strand = Plus / Minus

                                                                         
Query: 214   agctcaggcagttcacaactttctggctggcagctaactgttgatgcacttgatacattc 273
             |||||| | ||||||| |||||||||||||||  |||| |||||||||||||| ||||||
Sbjct: 22388 agctcaagtagttcaccactttctggctggcaattaacagttgatgcacttgacacattc 22329

                                                                         
Query: 274   cagtcccttggtcagtctcaaaaccaaaccatgcggtctgaatctgcggcctcgctaaat 333
             || || ||||||||  ||||||| ||  | ||||| ||||| || || |||||| || ||
Sbjct: 22328 caatctcttggtcaagctcaaaatcatgctatgcgatctgattccgcagcctcgttatat 22269

                 
Query: 334   atgg 337
             ||||
Sbjct: 22268 atgg 22265



 Score = 46.1 bits (23), Expect = 0.22
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 3     atctaaagaggaagtgacgcaggttggcaaa 33
             |||||||||||||||||| |||| |||||||
Sbjct: 23123 atctaaagaggaagtgacacaggctggcaaa 23093



 Score = 42.1 bits (21), Expect = 3.4
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 360   caagctggcgagaaggacttcagtgaacaaaagccatgggaaatg 404
             |||||| || |||||| | ||||||| || |||||||||||||||
Sbjct: 22050 caagctcgccagaagggcatcagtgagcagaagccatgggaaatg 22006



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  149 bits (75), Expect = 2e-32
 Identities = 102/111 (91%)
 Strand = Plus / Minus

                                                                            
Query: 85       ggagcaacaaatggagaaaacgactatgaaccaggccttccagattttgatcctgttaag 144
                |||||||||||||||||||| || | |||| |||| |||||||| |||||||||||||||
Sbjct: 32379260 ggagcaacaaatggagaaaatgattttgaatcaggacttccagaatttgatcctgttaag 32379201

                                                                   
Query: 145      catcacaacagttactgtccatgggtcaatggaactgttgcagcagcttgc 195
                ||||||||||||||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 32379200 catcacaacagttactgcccatgggtaaatggaactgtggcagcagcttgc 32379150



 Score = 79.8 bits (40), Expect = 2e-11
 Identities = 103/124 (83%)
 Strand = Plus / Minus

                                                                            
Query: 214      agctcaggcagttcacaactttctggctggcagctaactgttgatgcacttgatacattc 273
                |||||| | ||||||| |||||||||||||||  |||| |||||||||||||| ||||||
Sbjct: 32379131 agctcaagtagttcaccactttctggctggcaattaacagttgatgcacttgacacattc 32379072

                                                                            
Query: 274      cagtcccttggtcagtctcaaaaccaaaccatgcggtctgaatctgcggcctcgctaaat 333
                || || ||||||||  ||||||| ||  | ||||| ||||| || || |||||| || ||
Sbjct: 32379071 caatctcttggtcaagctcaaaatcatgctatgcgatctgattccgcagcctcgttatat 32379012

                    
Query: 334      atgg 337
                ||||
Sbjct: 32379011 atgg 32379008



 Score = 46.1 bits (23), Expect = 0.22
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 3        atctaaagaggaagtgacgcaggttggcaaa 33
                |||||||||||||||||| |||| |||||||
Sbjct: 32379866 atctaaagaggaagtgacacaggctggcaaa 32379836



 Score = 42.1 bits (21), Expect = 3.4
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                             
Query: 360      caagctggcgagaaggacttcagtgaacaaaagccatgggaaatg 404
                |||||| || |||||| | ||||||| || |||||||||||||||
Sbjct: 32378793 caagctcgccagaagggcatcagtgagcagaagccatgggaaatg 32378749



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>emb|AJ234648.1|HVU234648 Hordeum vulgare genomic DNA fragment; clone MWG0922.uni
          Length = 373

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 847 tcacccttgaccttgggaataaagaatttagttc 880
           |||||||||||||||||| |||||| ||||||||
Sbjct: 373 tcacccttgaccttgggattaaagattttagttc 340



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>emb|X74443.2|RVNUCPROA Peste-des-petits-ruminants virus complete genome
          Length = 15948

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 261  acttgatacattccagtcccttg 283
            |||||||||||||||||||||||
Sbjct: 1858 acttgatacattccagtcccttg 1836



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>emb|AJ298897.2|PDE298897 Peste-des-petits-ruminants virus mRNA for phosphoprotein (p gene)
          Length = 1655

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 261 acttgatacattccagtcccttg 283
           |||||||||||||||||||||||
Sbjct: 111 acttgatacattccagtcccttg 89



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>ref|XR_026541.1| PREDICTED: Strongylocentrotus purpuratus similar to axonemal dynein
            heavy chain 7 (LOC581061), mRNA
          Length = 12743

 Score = 44.1 bits (22), Expect = 0.85
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 123  tccagattttgatcctgttaag 144
            ||||||||||||||||||||||
Sbjct: 8439 tccagattttgatcctgttaag 8460



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>ref|XR_026449.1| PREDICTED: Strongylocentrotus purpuratus similar to axonemal dynein
            heavy chain 7 (LOC581061), mRNA
          Length = 12743

 Score = 44.1 bits (22), Expect = 0.85
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 123  tccagattttgatcctgttaag 144
            ||||||||||||||||||||||
Sbjct: 8439 tccagattttgatcctgttaag 8460



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>gb|AF265664.1| Solanum tuberosum resistance gene cluster, complete sequence
          Length = 187352

 Score = 44.1 bits (22), Expect = 0.85
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 76    aatggattgggagcaacaaatg 97
             ||||||||||||||||||||||
Sbjct: 95047 aatggattgggagcaacaaatg 95068



 Score = 44.1 bits (22), Expect = 0.85
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 76     aatggattgggagcaacaaatg 97
              ||||||||||||||||||||||
Sbjct: 143887 aatggattgggagcaacaaatg 143908



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>emb|CR388207.13| Zebrafish DNA sequence from clone CH211-28E16 in linkage group 23,
              complete sequence
          Length = 191838

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 658    cagtgattttactgtctttat 678
              |||||||||||||||||||||
Sbjct: 123492 cagtgattttactgtctttat 123472



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>ref|NM_001065435.1| Oryza sativa (japonica cultivar-group) Os07g0150500 (Os07g0150500)
            mRNA, complete cds
          Length = 3249

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 75/93 (80%)
 Strand = Plus / Plus

                                                                        
Query: 231  actttctggctggcagctaactgttgatgcacttgatacattccagtcccttggtcagtc 290
            |||||| ||||||||||| || || |||||||| || ||  ||||||| |||| |||  |
Sbjct: 2737 actttccggctggcagcttacagtagatgcactggaaactatccagtctcttgctcaagc 2796

                                             
Query: 291  tcaaaaccaaaccatgcggtctgaatctgcggc 323
             ||||| ||||  |||| |||||| ||||||||
Sbjct: 2797 ccaaaatcaaattatgccgtctgactctgcggc 2829



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>emb|CR589875.9| Zebrafish DNA sequence from clone DKEY-15K16 in linkage group 11,
             complete sequence
          Length = 223329

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 658   cagtgattttactgtctttat 678
             |||||||||||||||||||||
Sbjct: 88637 cagtgattttactgtctttat 88657



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>emb|CT033808.5| Zebrafish DNA sequence from clone CH211-105H17 in linkage group 1,
             complete sequence
          Length = 68463

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 658   cagtgattttactgtctttat 678
             |||||||||||||||||||||
Sbjct: 36034 cagtgattttactgtctttat 36054



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>emb|CR407546.16| Zebrafish DNA sequence from clone CH211-276E3 in linkage group 17,
             complete sequence
          Length = 103614

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 658   cagtgattttactgtctttat 678
             |||||||||||||||||||||
Sbjct: 70944 cagtgattttactgtctttat 70924



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 75/93 (80%)
 Strand = Plus / Minus

                                                                           
Query: 231     actttctggctggcagctaactgttgatgcacttgatacattccagtcccttggtcagtc 290
               |||||| ||||||||||| || || |||||||| || ||  ||||||| |||| |||  |
Sbjct: 2667287 actttccggctggcagcttacagtagatgcactggaaactatccagtctcttgctcaagc 2667228

                                                
Query: 291     tcaaaaccaaaccatgcggtctgaatctgcggc 323
                ||||| ||||  |||| |||||| ||||||||
Sbjct: 2667227 ccaaaatcaaattatgccgtctgactctgcggc 2667195



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>emb|AL031294.1|HS885E17 Human DNA sequence from clone RP5-885E17 on chromosome 1p33-34.1
             Contains the 5' end of a novel gene, complete sequence
          Length = 83957

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 731   agaattttgcaagtgaattga 751
             |||||||||||||||||||||
Sbjct: 20113 agaattttgcaagtgaattga 20093



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>gb|AC020925.8| Homo sapiens chromosome 5 clone CTD-2134K2, complete sequence
          Length = 161452

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 505    atttacatgcagtgctgctgc 525
              |||||||||||||||||||||
Sbjct: 144602 atttacatgcagtgctgctgc 144622



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>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 567   gaagaaaacaagttaataatc 587
             |||||||||||||||||||||
Sbjct: 38402 gaagaaaacaagttaataatc 38382



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>emb|AL590149.9| Zebrafish DNA sequence from clone RP71-36D5 in linkage group 17
             Contains the 3' part of a novel gene similar to KIAA0953,
             a novel gene similar to POMC (propiomelanocortin), a novel
             gene similar to FCN2 (ficolin 2), a novel gene similar to
             SNX9 (sorting nexin 9) and a CpG island, complete sequence
          Length = 167272

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 658   cagtgattttactgtctttat 678
             |||||||||||||||||||||
Sbjct: 61172 cagtgattttactgtctttat 61152



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>emb|AL645809.8| Mouse DNA sequence from clone RP23-402D13 on chromosome 11 Contains the
             5' end of the Tisp78 gene for transcript increased in
             spermiogenesis 78, the Epn3 gene for epsin 3, the Mycbpap
             gene for mycbp associated protein, the gene for a novel
             protein (B430319G23Rik), the 5' end of the gene for a
             novel protein (9330162N21Rik) and the Chad gene for
             chondroadherin, complete sequence
          Length = 106815

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 274   cagtcccttggtcagtctcaa 294
             |||||||||||||||||||||
Sbjct: 66685 cagtcccttggtcagtctcaa 66705



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>emb|BX664744.10| Zebrafish DNA sequence from clone CH211-226F3 in linkage group 8,
            complete sequence
          Length = 3967

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 658  cagtgattttactgtctttat 678
            |||||||||||||||||||||
Sbjct: 3054 cagtgattttactgtctttat 3034



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>emb|BX511266.14| Zebrafish DNA sequence from clone CH211-245D7 in linkage group 14,
              complete sequence
          Length = 160419

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 658    cagtgattttactgtctttat 678
              |||||||||||||||||||||
Sbjct: 142321 cagtgattttactgtctttat 142341



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>emb|CR626864.10| Zebrafish DNA sequence from clone DKEY-156N14 in linkage group 2,
             complete sequence
          Length = 173100

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 658   cagtgattttactgtctttat 678
             |||||||||||||||||||||
Sbjct: 19058 cagtgattttactgtctttat 19038



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>emb|CR394529.7| Zebrafish DNA sequence from clone CH211-121F17 in linkage group 24,
             complete sequence
          Length = 75984

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 658   cagtgattttactgtctttat 678
             |||||||||||||||||||||
Sbjct: 70209 cagtgattttactgtctttat 70189



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>emb|CR405703.5| Zebrafish DNA sequence from clone DKEYP-52E4 in linkage group 5,
             complete sequence
          Length = 81891

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 658   cagtgattttactgtctttat 678
             |||||||||||||||||||||
Sbjct: 26235 cagtgattttactgtctttat 26255



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>gb|AC010468.5|AC010468 Homo sapiens chromosome 5 clone CTD-2290C20, complete sequence
          Length = 122102

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 505   atttacatgcagtgctgctgc 525
             |||||||||||||||||||||
Sbjct: 47251 atttacatgcagtgctgctgc 47231



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>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1027_G06
          Length = 121885

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 75/93 (80%)
 Strand = Plus / Minus

                                                                         
Query: 231   actttctggctggcagctaactgttgatgcacttgatacattccagtcccttggtcagtc 290
             |||||| ||||||||||| || || |||||||| || ||  ||||||| |||| |||  |
Sbjct: 93005 actttccggctggcagcttacagtagatgcactggaaactatccagtctcttgctcaagc 92946

                                              
Query: 291   tcaaaaccaaaccatgcggtctgaatctgcggc 323
              ||||| ||||  |||| |||||| ||||||||
Sbjct: 92945 ccaaaatcaaattatgccgtctgactctgcggc 92913



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>emb|BX511253.13| Zebrafish DNA sequence from clone DKEY-45M5 in linkage group 8,
            complete sequence
          Length = 216373

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 658  cagtgattttactgtctttat 678
            |||||||||||||||||||||
Sbjct: 1141 cagtgattttactgtctttat 1121



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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 567   gaagaaaacaagttaataatc 587
             |||||||||||||||||||||
Sbjct: 40191 gaagaaaacaagttaataatc 40171



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>emb|BX321868.13| Zebrafish DNA sequence from clone RP71-41I21, complete sequence
          Length = 135717

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 658  cagtgattttactgtctttat 678
            |||||||||||||||||||||
Sbjct: 2990 cagtgattttactgtctttat 3010



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>emb|BX324110.10| Zebrafish DNA sequence from clone DKEY-250F19 in linkage group 3,
             complete sequence
          Length = 103014

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 658   cagtgattttactgtctttat 678
             |||||||||||||||||||||
Sbjct: 49569 cagtgattttactgtctttat 49549



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>emb|BX324146.10| Zebrafish DNA sequence from clone CH211-207C15 in linkage group 19,
              complete sequence
          Length = 230267

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 658    cagtgattttactgtctttat 678
              |||||||||||||||||||||
Sbjct: 224457 cagtgattttactgtctttat 224437



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>emb|BX284110.16| Zebrafish DNA sequence from clone DKEYP-67D7 in linkage group 10,
             complete sequence
          Length = 179798

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 658   cagtgattttactgtctttat 678
             |||||||||||||||||||||
Sbjct: 32657 cagtgattttactgtctttat 32637



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>dbj|AK073749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070M17, full
            insert sequence
          Length = 3250

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 75/93 (80%)
 Strand = Plus / Plus

                                                                        
Query: 231  actttctggctggcagctaactgttgatgcacttgatacattccagtcccttggtcagtc 290
            |||||| ||||||||||| || || |||||||| || ||  ||||||| |||| |||  |
Sbjct: 2738 actttccggctggcagcttacagtagatgcactggaaactatccagtctcttgctcaagc 2797

                                             
Query: 291  tcaaaaccaaaccatgcggtctgaatctgcggc 323
             ||||| ||||  |||| |||||| ||||||||
Sbjct: 2798 ccaaaatcaaattatgccgtctgactctgcggc 2830



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>emb|AL953910.14| Zebrafish DNA sequence from clone DKEY-31E10 in linkage group 1, complete
              sequence
          Length = 190793

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 658    cagtgattttactgtctttat 678
              |||||||||||||||||||||
Sbjct: 181360 cagtgattttactgtctttat 181340



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>emb|BX088528.7| Zebrafish DNA sequence from clone CH211-226D23 in linkage group 1,
              complete sequence
          Length = 171618

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 658    cagtgattttactgtctttat 678
              |||||||||||||||||||||
Sbjct: 153933 cagtgattttactgtctttat 153913



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>emb|AL954634.12| Zebrafish DNA sequence from clone DKEY-58C20 in linkage group 14,
              complete sequence
          Length = 195499

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 658    cagtgattttactgtctttat 678
              |||||||||||||||||||||
Sbjct: 117952 cagtgattttactgtctttat 117972



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>emb|BX004756.7| Zebrafish DNA sequence from clone CH211-59A4 in linkage group 1, complete
              sequence
          Length = 169530

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 658    cagtgattttactgtctttat 678
              |||||||||||||||||||||
Sbjct: 116704 cagtgattttactgtctttat 116724



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>emb|AL929031.3| Zebrafish DNA sequence from clone CH211-255L18 in linkage group 17,
            complete sequence
          Length = 187548

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 658  cagtgattttactgtctttat 678
            |||||||||||||||||||||
Sbjct: 5771 cagtgattttactgtctttat 5751



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>emb|BX004829.12| Zebrafish DNA sequence from clone DKEY-29O15, complete sequence
          Length = 231581

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 658  cagtgattttactgtctttat 678
            |||||||||||||||||||||
Sbjct: 4737 cagtgattttactgtctttat 4717



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>emb|AL929299.10| Zebrafish DNA sequence from clone BUSM1-SL6, complete sequence
          Length = 72631

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 658   cagtgattttactgtctttat 678
             |||||||||||||||||||||
Sbjct: 11866 cagtgattttactgtctttat 11886



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>emb|AL953859.7| Zebrafish DNA sequence from clone DKEY-53P21, complete sequence
          Length = 203360

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 658    cagtgattttactgtctttat 678
              |||||||||||||||||||||
Sbjct: 155642 cagtgattttactgtctttat 155662



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>gb|AC124180.5| Mus musculus BAC clone RP23-200I16 from 16, complete sequence
          Length = 199422

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 384   gaacaaaagccatgggaaatg 404
             |||||||||||||||||||||
Sbjct: 70617 gaacaaaagccatgggaaatg 70597



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>emb|AL935277.6| Zebrafish DNA sequence from clone CH211-250C16, complete sequence
          Length = 69315

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 658   cagtgattttactgtctttat 678
             |||||||||||||||||||||
Sbjct: 30457 cagtgattttactgtctttat 30437


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 171,751,030
Number of extensions: 9134724
Number of successful extensions: 180989
Number of sequences better than 10.0: 46
Number of HSP's gapped: 180986
Number of HSP's successfully gapped: 59
Length of query: 895
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 872
Effective length of database: 18,503,978,556
Effective search space: 16135469300832
Effective search space used: 16135469300832
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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