ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf177k23 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK059572:Os02g0816700 | 220 | 7e-58 | 2 | AK064799:Os06g0214100 | 67 | 9e-12 | 3 | AK120494:Os02g0761600 | 53 | 2e-07 | 4 | AK101978:Os06g0229800 | 32 | 0.56 | 5 | AF419099:Os06g0229800 | 32 | 0.56 | 6 | AK099793:Os05g0563400 | 30 | 1.6 | 7 | AB071290:Os05g0563400 | 30 | 1.6 | 8 | Os06g0174300:Os06g0174300 | 30 | 2.1 | 9 | AK119823:Os05g0486100 | 30 | 2.1 | 10 | AK105683:Os05g0486100 | 30 | 2.1 | 11 | Os01g0783900:Os01g0783900 | 29 | 3.6 | 12 | AK110395: | 28 | 4.8 | 13 | AK101340:Os05g0490000 | 28 | 4.8 | 14 | AK073946:Os12g0615800 | 28 | 4.8 | 15 | AK110794:Os04g0235600 | 28 | 6.2 |
|---|
>AK059572:Os02g0816700 | Length = 155 Score = 220 bits (561), Expect = 7e-58 Identities = 112/146 (76%), Positives = 127/146 (86%), Gaps = 2/146 (1%) Frame = +1 Query: 91 GMTAASRLSYKNATVALCAINVLAVALLLRSHFSSWPRIAGGHRFDSDQLRYIWESEELR 270 G +A+SR+SYKNATVA+CAIN+LA ALL R+++SSWPRIAG H+FDS QLR+IWESEELR Sbjct: 10 GASASSRISYKNATVAVCAINLLACALLFRNYYSSWPRIAGDHQFDSAQLRFIWESEELR 69 Query: 271 RAMEPVDLIRRVKEIEQEAYGEPGMSTAQEG--TAAVDLSKRLKDLRQGNDGSSQRALEE 444 RAMEPVDLIRRVKEIEQEAYGE GM T ++ TAAVD SKRL+DLR GNDGSSQ+ALEE Sbjct: 70 RAMEPVDLIRRVKEIEQEAYGEHGMMTQEDAKQTAAVDASKRLQDLRAGNDGSSQKALEE 129 Query: 445 WRKRKMERARQRAIGKDGMIPGTKTR 522 WRKRKMERARQRAI K+G KTR Sbjct: 130 WRKRKMERARQRAIEKNGTSSAAKTR 155
>AK064799:Os06g0214100 | Length = 333 Score = 67.4 bits (163), Expect = 9e-12 Identities = 45/144 (31%), Positives = 81/144 (56%), Gaps = 11/144 (7%) Frame = +1 Query: 76 AGAVDGMTAASRLSYKNATVALCAINVLAVALLLRS------HFSSWPRIAGGHRFDSDQ 237 A A+ G +AA +Y+ TVA+C N++AV L++RS +F+S PR ++ +Q Sbjct: 10 AAALGGRSAARWCTYRRVTVAVCLGNLVAVLLVVRSLYSAPGYFASAPRRVAV-KYSEEQ 68 Query: 238 LRYIWESEELRRAMEPVDLIRRVKEIE----QEAYGEPGMSTAQEGTAAVDLSKRLKDLR 405 +R + ES +RRA V+L+ VK++E +E + + + ++ +R++DL Sbjct: 69 IRLVEESIRIRRAAVSVELVEAVKKLEKVFAREEKRRKELPLELKQKVSYEILERMRDLG 128 Query: 406 QGNDGSSQR-ALEEWRKRKMERAR 474 + ++ + QR ALE WR K++ R Sbjct: 129 ENSNTTEQREALESWRLEKLKDIR 152
>AK120494:Os02g0761600 | Length = 330 Score = 52.8 bits (125), Expect = 2e-07 Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 11/148 (7%) Frame = +1 Query: 76 AGAVDGMTAASR-LSYKNATVALCAINVLAVALLLRSHFS---SWPRIAGGHRFDSDQLR 243 A + G A +R SY+ TVA+C N++A L+LRS S + P+ + +Q+R Sbjct: 8 AASFGGRAATARWCSYRRITVAVCLGNLVAALLVLRSLTSLAPTPPKREEVVEYTEEQIR 67 Query: 244 YIWESEELRRAMEPVDLIRRVKEI------EQEAYGEPGMSTAQEGTAAVDLSKRLKDLR 405 ES +RR EPV+L+ VK + E++ E + Q+ + ++ + L DL Sbjct: 68 KAEESIRIRREAEPVELVEAVKNLRKIFRREEKRRKELPLELKQK--VSYEIVQLLLDLG 125 Query: 406 QGNDGSSQR-ALEEWRKRKMERARQRAI 486 + + QR A+E WR K++ + +I Sbjct: 126 DNSSFAQQREAVESWRFEKLKDIKSASI 153
>AK101978:Os06g0229800 | Length = 810 Score = 31.6 bits (70), Expect = 0.56 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +3 Query: 417 RQQPKSFGGVAQAEDGAGEAACDREGRDDSRHED 518 R + + G V +A+DG EAA +R G DD E+ Sbjct: 59 RPRRRDAGVVRRADDGENEAAVERAGEDDDEEEE 92
>AF419099:Os06g0229800 | Length = 810 Score = 31.6 bits (70), Expect = 0.56 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +3 Query: 417 RQQPKSFGGVAQAEDGAGEAACDREGRDDSRHED 518 R + + G V +A+DG EAA +R G DD E+ Sbjct: 59 RPRRRDAGVVRRADDGENEAAVERAGEDDDEEEE 92
>AK099793:Os05g0563400 | Length = 264 Score = 30.0 bits (66), Expect = 1.6 Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 8/52 (15%) Frame = +3 Query: 396 RFTARERRQQPKSFG---GVAQA-----EDGAGEAACDREGRDDSRHEDTVK 527 R R RR P+ G GV A E G GEA R GR RHE V+ Sbjct: 159 RLLPRRRRHPPRGRGDRRGVRAALACPGEGGGGEAGGRRRGRGRGRHEAAVR 210
>AB071290:Os05g0563400 | Length = 223 Score = 30.0 bits (66), Expect = 1.6 Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 8/52 (15%) Frame = +3 Query: 396 RFTARERRQQPKSFG---GVAQA-----EDGAGEAACDREGRDDSRHEDTVK 527 R R RR P+ G GV A E G GEA R GR RHE V+ Sbjct: 118 RLLPRRRRHPPRGRGDRRGVRAALACPGEGGGGEAGGRRRGRGRGRHEAAVR 169
>Os06g0174300:Os06g0174300 | Length = 1798 Score = 29.6 bits (65), Expect = 2.1 Identities = 21/106 (19%), Positives = 48/106 (45%), Gaps = 1/106 (0%) Frame = +1 Query: 157 LAVALLLRSHFSSWPRIAGGHRFDSDQLRYIWESEELRRAMEPVDLIRRVKEIEQEAYGE 336 + +L L H + W H S++ + ++ E +R+ + P D + + + Sbjct: 1156 IQTSLELCEHGNKWDMCTKEHS-RSNEFKRLFVPEAIRKLIRPYDKELSIPPVFPGVHDG 1214 Query: 337 PGMSTAQE-GTAAVDLSKRLKDLRQGNDGSSQRALEEWRKRKMERA 471 +++ +E +++DL +R KD + D + W+KR++ A Sbjct: 1215 NEVNSKEEVNDSSLDLKRRGKDDQDFGDENDNVEEATWKKRRLADA 1260
>AK119823:Os05g0486100 | Length = 969 Score = 29.6 bits (65), Expect = 2.1 Identities = 24/67 (35%), Positives = 30/67 (44%) Frame = +1 Query: 220 RFDSDQLRYIWESEELRRAMEPVDLIRRVKEIEQEAYGEPGMSTAQEGTAAVDLSKRLKD 399 RF +R + ES R AM V VKEIE EP + A EG ++ D S D Sbjct: 875 RFVQLAMRCVDESAAARPAMGAV-----VKEIEAMLQNEPDDAGAGEGDSSADPSANEFD 929 Query: 400 LRQGNDG 420 +G G Sbjct: 930 RHRGGGG 936
>AK105683:Os05g0486100 | Length = 391 Score = 29.6 bits (65), Expect = 2.1 Identities = 24/67 (35%), Positives = 30/67 (44%) Frame = +1 Query: 220 RFDSDQLRYIWESEELRRAMEPVDLIRRVKEIEQEAYGEPGMSTAQEGTAAVDLSKRLKD 399 RF +R + ES R AM V VKEIE EP + A EG ++ D S D Sbjct: 297 RFVQLAMRCVDESAAARPAMGAV-----VKEIEAMLQNEPDDAGAGEGDSSADPSANEFD 351 Query: 400 LRQGNDG 420 +G G Sbjct: 352 RHRGGGG 358
>Os01g0783900:Os01g0783900 | Length = 642 Score = 28.9 bits (63), Expect = 3.6 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Frame = +1 Query: 100 AASRLSYKNATVALCAINVLAVALLLRSHFS---SWPRIAGGHRFDSDQLRYIWESEE 264 AAS L + V L A V +VA L+ + W + + D+D +WESEE Sbjct: 152 AASELESRGTPVVLIAATVSSVAFLIFASLIFLWMWRQKSKAKGVDTDSAIKLWESEE 209
>AK110395: | Length = 905 Score = 28.5 bits (62), Expect = 4.8 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +1 Query: 340 GMSTAQEGTAAVDLSKRLKDLRQGNDGS-SQRALEEWRKRKMERARQRAIGKDGMIPGTK 516 GM+TA E A + L+ + +DG+ + RAL +W + + R+R G G G + Sbjct: 560 GMATAIEALVARTPTHVLRGYGRTDDGACNARALAQWAAERAQLMRERGGGHGGGRGGGR 619 Query: 517 TR 522 R Sbjct: 620 ER 621
>AK101340:Os05g0490000 | Length = 656 Score = 28.5 bits (62), Expect = 4.8 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 5/54 (9%) Frame = +1 Query: 346 STAQEGTAAVDLSKRLKDLRQGNDGSSQRALEEWRKR-----KMERARQRAIGK 492 S ++EG A+ + K L + + DG ++ E RKR KM RQ A GK Sbjct: 594 SKSEEGPASSEPEKELPNEQGDADGKAKSTRSERRKRRRRELKMTTERQAAYGK 647
>AK073946:Os12g0615800 | Length = 844 Score = 28.5 bits (62), Expect = 4.8 Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 16/106 (15%) Frame = +1 Query: 211 GGHRFDSDQLRYIWESEELRRAMEPVDLIRRV-----------KEIEQEAYGEPGMSTAQ 357 G +DSD R + R EP DL R V KE E E PG+ A Sbjct: 52 GDSDYDSDDGRRRSRRKRRRDEAEP-DLSRPVHFQSAGKFMPSKEPEPELEERPGLGAAA 110 Query: 358 EGTAAVDLSKRLKDLRQGND-----GSSQRALEEWRKRKMERARQR 480 +A+ + + D QR E R R+ ERAR+R Sbjct: 111 SASASASAAGEDDAAEEEEDLDLPTAFGQRIAEGARARREERARER 156
>AK110794:Os04g0235600 | Length = 141 Score = 28.1 bits (61), Expect = 6.2 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 10/94 (10%) Frame = +1 Query: 238 LRYIWESEELRRA-MEPVDLIR-RVKEIEQEA--YGEPGMSTAQEGTA------AVDLSK 387 L I SEELRR +E ++ R R++++E EA Y G S + A ++ L + Sbjct: 19 LSTIRNSEELRRGTIEQLEKARIRLQKVELEADEYRMNGYSEIEREKANLINATSISLEQ 78 Query: 388 RLKDLRQGNDGSSQRALEEWRKRKMERARQRAIG 489 K + QRA+ + R+R ++A Q A+G Sbjct: 79 LEKSKNETLYFEKQRAMNQVRQRVFQQAVQGALG 112 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 17,384,920 Number of extensions: 351297 Number of successful extensions: 1300 Number of sequences better than 10.0: 15 Number of HSP's gapped: 1297 Number of HSP's successfully gapped: 15 Length of query: 239 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 141 Effective length of database: 11,475,837 Effective search space: 1618093017 Effective search space used: 1618093017 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
