ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf177k23 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os02g57170:12002.t05289:unspliced-genomic expressed protein| Length = 1994 Score = 87.7 bits (185), Expect(5) = 6e-50 Identities = 34/47 (72%), Positives = 43/47 (91%) Frame = +1 / +3 Query: 91 GMTAASRLSYKNATVALCAINVLAVALLLRSHFSSWPRIAGGHRFDS 231 G +A+SR+SYKNATVA+CAIN+LA ALL R+++SSWPRIAG H+FDS Sbjct: 105 GASASSRISYKNATVAVCAINLLACALLFRNYYSSWPRIAGDHQFDS 245 Score = 57.0 bits (118), Expect(5) = 6e-50 Identities = 23/24 (95%), Positives = 24/24 (100%) Frame = +1 / +3 Query: 235 QLRYIWESEELRRAMEPVDLIRRV 306 QLR+IWESEELRRAMEPVDLIRRV Sbjct: 720 QLRFIWESEELRRAMEPVDLIRRV 791 Score = 54.7 bits (113), Expect(5) = 6e-50 Identities = 24/31 (77%), Positives = 25/31 (80%) Frame = +1 / +3 Query: 433 ALEEWRKRKMERARQRAIGKDGMIPGTKTR* 525 ALEEWRKRKMERARQRAI K+G KTR* Sbjct: 1701 ALEEWRKRKMERARQRAIEKNGTSSAAKTR* 1793 Score = 46.0 bits (94), Expect(5) = 6e-50 Identities = 19/23 (82%), Positives = 21/23 (91%) Frame = +1 / +1 Query: 364 TAAVDLSKRLKDLRQGNDGSSQR 432 TAAVD SKRL+DLR GNDGSSQ+ Sbjct: 958 TAAVDASKRLQDLRAGNDGSSQK 1026 Score = 35.4 bits (71), Expect(5) = 6e-50 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +1 / +1 Query: 304 VKEIEQEAYGEPGMSTAQE 360 VKEIEQEAYGE GM T ++ Sbjct: 892 VKEIEQEAYGEHGMMTQED 948 Score = 57.4 bits (119), Expect(5) = 5e-36 Identities = 27/45 (60%), Positives = 31/45 (68%) Frame = -1 / -2 Query: 224 NRWPPAIRGQDEKWLRRRSATASTLMAHRATVAFL*DSLDAAVIP 90 N W PA+RGQDE LR+R A A L+AH ATVAFL D L+ A P Sbjct: 238 NWWSPAMRGQDE**LRKRRAHARRLIAHTATVAFLYDILEEAEAP 104 Score = 57.0 bits (118), Expect(5) = 5e-36 Identities = 23/32 (71%), Positives = 26/32 (81%) Frame = -1 / -2 Query: 527 LHRVFVPGIIPSFPIARCLARSIFRLRHSSKA 432 +HRVF +P F IARCLARSIFRLRHSS+A Sbjct: 1795 IHRVFAADEVPFFSIARCLARSIFRLRHSSRA 1700 Score = 44.1 bits (90), Expect(5) = 5e-36 Identities = 18/22 (81%), Positives = 18/22 (81%) Frame = -1 / -1 Query: 428 WLLPSFPCRKSFNLFDKSTAAV 363 WLLPSFP KS NLFD STAAV Sbjct: 1022 WLLPSFPALKSCNLFDASTAAV 957 Score = 40.9 bits (83), Expect(5) = 5e-36 Identities = 19/25 (76%), Positives = 20/25 (80%) Frame = -2 / -3 Query: 304 LS*SNPQAP*HGAALRTPIYTVADL 230 LS*SNPQAP*H L TPI TVA+L Sbjct: 789 LS*SNPQAP*HDVTLPTPI*TVAEL 715 Score = 33.1 bits (66), Expect(5) = 5e-36 Identities = 15/25 (60%), Positives = 17/25 (68%) Frame = -1 / -1 Query: 377 STAAVPSCAVDMPGSP*ASCSISFT 303 + + S V MP SP*ASCSISFT Sbjct: 965 AAVCLASSCVIMPCSP*ASCSISFT 891 Score = 49.2 bits (101), Expect(5) = 4e-17 Identities = 20/26 (76%), Positives = 22/26 (84%) Frame = +2 / +1 Query: 230 QISYGIYGSPKSCAVLWSLWI*LGE* 307 Q+SYG+YGS KS VLWSLWI* GE* Sbjct: 715 QLSYGLYGSRKSYVVLWSLWI*SGE* 792 Score = 35.9 bits (72), Expect(5) = 4e-17 Identities = 16/25 (64%), Positives = 16/25 (64%) Frame = +3 / +3 Query: 363 DGCC*LIKKVKRFTARERRQQPKSF 437 D CC* IKKV RF RE QPK F Sbjct: 957 DSCC*CIKKVARFKGRE*W*QPKRF 1031 Score = 29.9 bits (59), Expect(5) = 4e-17 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = +3 / +3 Query: 306 EGN*ARSLWRAWHVNSAR 359 EGN RSLW AWH ++ R Sbjct: 894 EGNRTRSLW*AWHDDTRR 947 Score = 28.6 bits (56), Expect(5) = 4e-17 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = +3 / +2 Query: 441 GVAQAEDGAGEAACDREGRD 500 G+AQ EDGA EAA D + RD Sbjct: 1709 GMAQTEDGACEAAGD*KERD 1768 Score = 23.1 bits (44), Expect(5) = 4e-17 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = +3 / +2 Query: 207 RRRPPVRF 230 RRRPPVRF Sbjct: 221 RRRPPVRF 244 Score = 36.8 bits (74), Expect(4) = 4e-10 Identities = 17/29 (58%), Positives = 19/29 (65%) Frame = -2 / -2 Query: 433 LFGCCRRSLAVNLLTFLISQQQPSLLALL 347 LFGC SL +NL TFL+ QQQ S LL Sbjct: 1027 LFGCYHHSLPLNLATFLMHQQQLSAWHLL 941 Score = 29.5 bits (58), Expect(4) = 4e-10 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = -3 / -3 Query: 351 C*HARLSISFLLNFLH 304 C HA L+ISFL +FLH Sbjct: 939 CHHAMLTISFLFDFLH 892 Score = 29.5 bits (58), Expect(4) = 4e-10 Identities = 18/43 (41%), Positives = 18/43 (41%) Frame = -3 / -1 Query: 219 VAAGDPRPGXXXXXXXXXXXXXVDGAQGDGCVLVGQPRCRRHP 91 V AGD RPG VD A DG VLV P R P Sbjct: 233 VVAGDARPGRVVVAEEESAREEVDCAHRDGGVLVRYPGGSRSP 105 Score = 29.0 bits (57), Expect(4) = 4e-10 Identities = 10/12 (83%), Positives = 12/12 (100%) Frame = -3 / -1 Query: 306 HSPNQIHRLHST 271 +SP+QIHRLHST Sbjct: 791 YSPDQIHRLHST 756 Score = 48.7 bits (100), Expect(2) = 3e-07 Identities = 19/25 (76%), Positives = 20/25 (80%) Frame = +3 / +2 Query: 234 SATVYMGVRRAAPCYGACGFD*ESE 308 SATVYMGV R CYGACGFD ES+ Sbjct: 719 SATVYMGVGRVTSCYGACGFDQESK 793 Score = 29.0 bits (57), Expect(2) = 3e-07 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = +2 / +2 Query: 365 RLLLTYQKG*KIYGKGTTAAAKEL 436 +LLL +QKG KI G+G AAK++ Sbjct: 959 QLLLMHQKGCKI*GQGMMVAAKKV 1030 Score = 26.7 bits (52), Expect(2) = 0.67 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -2 / -2 Query: 358 LALLTCQALHKLLAQFPS 305 L + +C A HKLL +FPS Sbjct: 946 LLVSSCHAHHKLLVRFPS 893 Score = 25.4 bits (49), Expect(2) = 0.67 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 / -2 Query: 305 TLLIKSTGSIA 273 TLLIKSTGSIA Sbjct: 790 TLLIKSTGSIA 758
>LOC_Os06g12450:12006.t01121:unspliced-genomic soluble starch synthase 2-3, chloroplast precursor, putative,| expressed Length = 4979 Score = 35.0 bits (70), Expect = 0.59 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +3 / +3 Query: 417 RQQPKSFGGVAQAEDGAGEAACDREGRDDSRHED 518 R + + G V +A+DG EAA +R G DD E+ Sbjct: 378 RPRRRDAGVVRRADDGENEAAVERAGEDDDEEEE 479
>LOC_Os07g04670:12007.t00354:unspliced-genomic conserved hypothetical protein| Length = 831 Score = 34.5 bits (69), Expect = 0.82 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = +1 / +3 Query: 331 GEPGMSTAQEGTAAVDLSKRLKDLRQGNDGSSQRALEEWRKRKMERARQRAI 486 G+PG ++A T + R+ LR+ GS+ R WR+R+ R+R + Sbjct: 648 GDPGATSAAAATVPQRCAVRVLRLRERPRGSTWRPWRPWRRRRRLLRRRRLL 803
>LOC_Os04g48700:12004.t04386:unspliced-genomic h/ACA ribonucleoprotein complex subunit 4, putative| Length = 6552 Score = 34.5 bits (69), Expect = 0.82 Identities = 16/54 (29%), Positives = 26/54 (48%) Frame = -3 / -2 Query: 675 VFSTAELQVILHAGHKIVRPLSPLQRTDQRRYLRAAAEQQANKQTKKTITSPCL 514 + + + I+H H I+ P+ P Q ++RA EQQA T++ P L Sbjct: 3521 IHGSPRIHDIVHCDHVILLPVDP*SHAVQLLHMRADTEQQAKVDTERPDIRPGL 3360
>LOC_Os03g29260:12003.t02550:unspliced-genomic elongation factor 1-delta 2, putative, expressed| Length = 4490 Score = 34.1 bits (68), Expect = 1.1 Identities = 13/32 (40%), Positives = 22/32 (68%) Frame = -1 / -2 Query: 596 PINDVICAPQQSNRQTNKQKKPLLHRVFVPGI 501 P+ ++ +P QS QT++ + LLH++ VPGI Sbjct: 1630 PVLLLLSSPLQSPHQTDQHRHHLLHQLLVPGI 1535
>LOC_Os07g44190:12007.t04060:unspliced-genomic h/ACA ribonucleoprotein complex subunit 4, putative, expressed| Length = 2176 Score = 33.6 bits (67), Expect = 1.5 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = -3 / -3 Query: 678 IVFSTAELQVILHAGHKIVRPLSPLQRTDQRRYLRAAAEQQANKQTKKTITSPCL 514 +V + I+H H I+ P P Q ++RA AEQQA ++ P L Sbjct: 911 VVHRPPRVHDIVHRDHVILLPEDPRSHAAQLLHMRADAEQQAKVDAERPDIGPGL 747
>LOC_Os05g22520:12005.t01912:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4910 Score = 33.6 bits (67), Expect = 1.5 Identities = 9/30 (30%), Positives = 19/30 (63%) Frame = +1 / -2 Query: 409 GNDGSSQRALEEWRKRKMERARQRAIGKDG 498 G G R +++WR+R++ ++ +GK+G Sbjct: 670 GKRGGGGRTVDQWRRRRVVEGERKGVGKEG 581
>LOC_Os11g31980:12011.t02795:unspliced-genomic serine carboxypeptidase 1 precursor, putative, expressed| Length = 3845 Score = 33.1 bits (66), Expect = 2.1 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +3 / -2 Query: 570 RRANNVVDRSVGAATVAARSCVLHVKSP 653 +R+ + S AA VA+RSC+LH K+P Sbjct: 418 QRSQHTAQSSPQAALVASRSCLLHCKNP 335
>LOC_Os09g21120:12009.t01846:unspliced-genomic ubiquitin-protein ligase, putative, expressed| Length = 2531 Score = 33.1 bits (66), Expect = 2.1 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -3 / +3 Query: 636 GHKIVRPLSPLQRTDQRRYLRAAAEQQANKQTKKTITSPCLRAGNHP 496 GH+ R P +R DQRR A Q+ + + P LR G+ P Sbjct: 1422 GHRGGRRRRPRRRRDQRRRQGRGAAQRGGRPLLPLVEQPGLRRGDRP 1562
>LOC_Os04g26280:12004.t02335:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1787 Score = 33.1 bits (66), Expect = 2.1 Identities = 11/32 (34%), Positives = 22/32 (68%) Frame = -2 / -2 Query: 397 LLTFLISQQQPSLLALLTCQALHKLLAQFPSL 302 ++T + S ++PS++A +TCQA ++ + P L Sbjct: 1642 IITLITSNRRPSIMASMTCQATPRMSSLLPHL 1547
>LOC_Os01g03600:12001.t00251:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 4068 Score = 29.0 bits (57), Expect(2) = 2.2 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = -3 / +1 Query: 630 KIVRPLSPLQRTDQRRYLRAAAEQQANKQTKKTITSPCL 514 K+ RP++ L R +++ AA E + K+ T+P L Sbjct: 2032 KLARPMTELLRKEKKFQWSAACEDSFQEMKKRLTTAPVL 2148 Score = 25.8 bits (50), Expect(2) = 2.2 Identities = 11/39 (28%), Positives = 20/39 (51%) Frame = -1 / +2 Query: 485 IARCLARSIFRLRHSSKALWLLPSFPCRKSFNLFDKSTA 369 I++ L ++R R S + P+F CR+ ++S A Sbjct: 3371 ISKALGIVVYRTRSSHTTTVIRPAFRCRRMRQCSEESAA 3487
>LOC_Os10g29880:12010.t02326:unspliced-genomic hypothetical protein| Length = 1711 Score = 32.7 bits (65), Expect = 2.9 Identities = 11/34 (32%), Positives = 21/34 (61%) Frame = +1 / +1 Query: 379 LSKRLKDLRQGNDGSSQRALEEWRKRKMERARQR 480 L R + + DG+++R + WR+R+ +R R+R Sbjct: 1273 LPPRAHQISRPRDGAARRGIGTWRRRRRQRQRRR 1374
>LOC_Os05g03490:12005.t00246:unspliced-genomic expressed protein| Length = 2376 Score = 32.7 bits (65), Expect = 2.9 Identities = 14/46 (30%), Positives = 21/46 (45%) Frame = +1 / -1 Query: 361 GTAAVDLSKRLKDLRQGNDGSSQRALEEWRKRKMERARQRAIGKDG 498 G + + +R + DGS R WR+R+ R R R+ DG Sbjct: 165 GNSRIGGDRRRWRVNSRGDGSRGRGRSTWRRRRRRRRRSRSRAADG 28
>LOC_Os02g41800:12002.t03767:unspliced-genomic auxin response factor 16, putative, expressed| Length = 2670 Score = 32.7 bits (65), Expect = 2.9 Identities = 16/63 (25%), Positives = 27/63 (42%) Frame = +1 / +1 Query: 298 RRVKEIEQEAYGEPGMSTAQEGTAAVDLSKRLKDLRQGNDGSSQRALEEWRKRKMERARQ 477 R V+ + + +G P G L ++D+ G+ + WR R+ E R+ Sbjct: 2020 RAVQGVHRVRHGRPQPRPLVAGLVRAALRPAVRDVLHRQRGAEEPCALPWRHRRSEARRR 2199 Query: 478 RAI 486 RAI Sbjct: 2200 RAI 2208
>LOC_Os02g43030:12002.t03888:unspliced-genomic conserved mebrane associated protein, DUF125, putative, expressed| Length = 968 Score = 25.8 bits (50), Expect(2) = 3.1 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +2 / -3 Query: 98 RRHRGCPTRTQPSP 139 RR RGC RT+P P Sbjct: 612 RRGRGCSPRTRPRP 571 Score = 24.0 bits (46), Expect(2) = 3.1 Identities = 12/31 (38%), Positives = 12/31 (38%) Frame = +3 / -3 Query: 126 RNRRPVRHQRARGGXXXXXXXXXXXXDRRRP 218 R RRP R RAR G RR P Sbjct: 450 RRRRPCRRARARSGPPGCRTARTRTRTRRWP 358
>LOC_Os12g16750:12012.t01528:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6550 Score = 32.2 bits (64), Expect = 4.0 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = -1 / -3 Query: 626 SCGHCRRSNGPINDVICAPQQSNRQTNKQKKPLLHRVFVPGIIPSFPIAR 477 S HC + PI+ V + N + Q +++ F P I+P++P AR Sbjct: 5687 SGAHCTSKSDPISSVDSVQRNWNFHLHNQGILPVYKHFSPKIVPTYPDAR 5538
>LOC_Os09g35760:12009.t03054:unspliced-genomic OCL3 protein, putative, expressed| Length = 6344 Score = 32.2 bits (64), Expect = 4.0 Identities = 17/38 (44%), Positives = 20/38 (52%) Frame = -2 / +2 Query: 421 CRRSLAVNLLTFLISQQQPSLLALLTCQALHKLLAQFP 308 C R LAVN L L + QPSL LL L K + +P Sbjct: 4598 CERRLAVNFLHVLEACLQPSLAELLPLSWLRKPVRLYP 4711
>LOC_Os09g30280:12009.t02706:unspliced-genomic transferase, transferring glycosyl groups, putative, expressed| Length = 4083 Score = 32.2 bits (64), Expect = 4.0 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +3 / -1 Query: 438 GGVAQAEDGAGEAACDREGRDDSRHED 518 GGV + DG G AA + EGR+ R E+ Sbjct: 297 GGVREGGDGDGGAAVEDEGREHRREEE 217
>LOC_Os07g06630:12007.t00542:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6205 Score = 32.2 bits (64), Expect = 4.0 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = -1 / -3 Query: 626 SCGHCRRSNGPINDVICAPQQSNRQTNKQKKPLLHRVFVPGIIPSFPIAR 477 S HC + PI+ V + N + Q +++ F P I+P++P AR Sbjct: 5213 SGAHCTSKSDPISSVDSVQRNWNFHLHNQGILPVYKHFSPKIVPAYPDAR 5064
>LOC_Os04g51410:12004.t04618:unspliced-genomic expressed protein| Length = 5522 Score = 32.2 bits (64), Expect = 4.0 Identities = 20/58 (34%), Positives = 28/58 (48%) Frame = -1 / +3 Query: 584 VICAPQQSNRQTNKQKKPLLHRVFVPGIIPSFPIARCLARSIFRLRHSSKALWLLPSF 411 V+C+ ++S + Q P LH F G IP+FP +R L F L + LP F Sbjct: 4404 VLCSVEESLK*KIFQYVPHLHCEFDVGWIPTFPSSRKLQVQSFYLLYQ*NKAKFLPLF 4577
>LOC_Os03g03220:12003.t00208:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2914 Score = 32.2 bits (64), Expect = 4.0 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -1 / -1 Query: 434 ALWLLPSFPCRKSFNLFDKSTAAVPSCAVD 345 A +LL SFPC + NLF K + SC D Sbjct: 1405 ARFLLSSFPCWSAQNLFQKDLYQMVSCKFD 1316
>LOC_Os01g11920:12001.t01061:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 13790 Score = 32.2 bits (64), Expect = 4.0 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = -1 / -3 Query: 626 SCGHCRRSNGPINDVICAPQQSNRQTNKQKKPLLHRVFVPGIIPSFPIAR 477 S HC + PI+ V + N + Q +++ F P I+P++P AR Sbjct: 12798 SGAHCTSKSDPISSVDSVQRNWNFHLHNQGILPVYKHFSPKIVPAYPDAR 12649
>LOC_Os02g46240:12002.t04211:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 4278 Score = 29.0 bits (57), Expect(2) = 4.1 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = -3 / +1 Query: 630 KIVRPLSPLQRTDQRRYLRAAAEQQANKQTKKTITSPCL 514 K+ RP++ L + + + AA E K K+ T+P L Sbjct: 2290 KLARPMTELLKKENKFQWSAACEDSFQKMKKRLTTAPVL 2406 Score = 24.9 bits (48), Expect(2) = 4.1 Identities = 11/39 (28%), Positives = 20/39 (51%) Frame = -1 / +2 Query: 485 IARCLARSIFRLRHSSKALWLLPSFPCRKSFNLFDKSTA 369 I++ L + R+R S + P+F CR+ ++S A Sbjct: 3629 ISKALGIVVCRMRSSHTTTAIRPAFRCRRMRQCSEESAA 3745
>LOC_Os01g18520:12001.t01645:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass, expressed| Length = 3522 Score = 28.6 bits (56), Expect(2) = 4.7 Identities = 11/39 (28%), Positives = 22/39 (56%) Frame = -3 / +1 Query: 630 KIVRPLSPLQRTDQRRYLRAAAEQQANKQTKKTITSPCL 514 K+ RP++ L + +++ AA E+ + K+ T+P L Sbjct: 1486 KLARPMTELLKKEKKFQWSAACEESFQEMKKRLTTAPVL 1602 Score = 24.9 bits (48), Expect(2) = 4.7 Identities = 11/39 (28%), Positives = 20/39 (51%) Frame = -1 / +2 Query: 485 IARCLARSIFRLRHSSKALWLLPSFPCRKSFNLFDKSTA 369 I++ L + R+R S + P+F CR+ ++S A Sbjct: 2825 ISKALGIVVCRMRSSHTTTVIRPAFRCRRMRQCSEESAA 2941
>LOC_Os07g48560:12007.t04486:unspliced-genomic WUSCHEL-related homeobox 11, putative, expressed| Length = 2641 Score = 24.9 bits (48), Expect(2) = 5.2 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +3 / +2 Query: 117 LQERNRRPVRHQRARG 164 L+ R RRPVRH A G Sbjct: 575 LRGRRRRPVRHLEADG 622 Score = 24.0 bits (46), Expect(2) = 5.2 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +3 / +1 Query: 207 RRRPPVRFRSATVYMGVRRAAPCY 278 RRRPPV S++ V +P Y Sbjct: 652 RRRPPVSISSSSSTTRVNLVSPSY 723
>LOC_Os07g30510:12007.t02738:unspliced-genomic receptor-like protein kinase, putative| Length = 4054 Score = 31.8 bits (63), Expect = 5.5 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -1 / -3 Query: 632 TRSCGHCRRSNGPINDVICAPQQSNRQTNKQKKPLLH 522 TRSC HCR+S ++ V C + S T + + H Sbjct: 698 TRSCRHCRQSPPDMSGVHCISENSGGVTTSIRTVVYH 588
>LOC_Os07g30410:12007.t02729:unspliced-genomic receptor-like protein kinase, putative| Length = 4054 Score = 31.8 bits (63), Expect = 5.5 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -1 / -3 Query: 632 TRSCGHCRRSNGPINDVICAPQQSNRQTNKQKKPLLH 522 TRSC HCR+S ++ V C + S T + + H Sbjct: 698 TRSCRHCRQSPPDMSGVHCISENSGGVTTSIRTVVYH 588
>LOC_Os04g10410:12004.t00874:unspliced-genomic amidase, putative, expressed| Length = 4685 Score = 31.8 bits (63), Expect = 5.5 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = +1 / +2 Query: 358 EGTAAVDLSKRLKDLRQGNDGSSQRALEEWRKRKMERA 471 E A V R + R+G D SSQRA+ EW + ER+ Sbjct: 4352 EHLADV*KHSRDRPCREGCDPSSQRAVSEWGREAHERS 4465
>LOC_Os03g40130:12003.t03447:unspliced-genomic universal stress protein family protein| Length = 1561 Score = 31.8 bits (63), Expect = 5.5 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = -1 / +2 Query: 629 RSCGHCRRSNGPINDVICAPQQSNRQTNKQ 540 R G CRR +G C+P R+T +Q Sbjct: 341 RCSGRCRRPSGATTQSSCSPSSGRRRTRRQ 430
>LOC_Os01g13620:12001.t01223:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5268 Score = 31.8 bits (63), Expect = 5.5 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -1 / +1 Query: 683 PISSSAQRSYR*FYMQDTRSCGHCRRSNG 597 P+S+ QR Y TR HCRRS+G Sbjct: 4297 PLSACRQRDTLEVYFSGTRRRAHCRRSSG 4383
>LOC_Os11g05070:12011.t00400:unspliced-genomic sodium/potassium/calcium exchanger 6 precursor, putative, expressed| Length = 3104 Score = 31.3 bits (62), Expect = 7.5 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -1 / -1 Query: 221 RWPPAIRGQDEKWLRRRSATA 159 +W PA + KW RRRSA+A Sbjct: 299 KWVPAAAARTRKWRRRRSASA 237
>LOC_Os09g25840:12009.t02263:unspliced-genomic conserved hypothetical protein| Length = 471 Score = 31.3 bits (62), Expect = 7.5 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = +1 / +3 Query: 409 GNDGSSQRALEEWRKRKMERARQRAIGKD 495 G DG+ +RA +W +++ ER R+R G D Sbjct: 237 GLDGAGRRASSQWWRQRGERQRRRRGGDD 323
>LOC_Os08g43710:12008.t04096:unspliced-genomic PE-PGRS family protein, putative| Length = 957 Score = 31.3 bits (62), Expect = 7.5 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +1 / +3 Query: 346 STAQEGTAAVDLSKRLKDLRQGNDGSSQRALEEWRKRKMERARQR 480 ST +EGT + +R + + G + R E WR R+ R +R Sbjct: 528 STGREGTGDAERGRRRRATTRTEQGRAARCDERWRARRGVRQGKR 662
>LOC_Os07g37930:12007.t03461:unspliced-genomic hypothetical protein| Length = 1356 Score = 31.3 bits (62), Expect = 7.5 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +1 / +1 Query: 418 GSSQRALEEWRKRKMERARQRAIGKDGMIPGTKTR 522 G + ++ WR+ + R R+R +DG PG +TR Sbjct: 241 GCTDGWMDRWRRCRRRRRRRRQSLRDGR*PGRRTR 345
>LOC_Os06g29640:12006.t02668:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 995 Score = 31.3 bits (62), Expect = 7.5 Identities = 10/32 (31%), Positives = 22/32 (68%) Frame = -2 / -2 Query: 397 LLTFLISQQQPSLLALLTCQALHKLLAQFPSL 302 ++ + S+++PS++A +TC A ++L+ P L Sbjct: 445 IIRLMTSKRRPSMMASMTCHATTRMLSLLPHL 350
>LOC_Os05g35260:12005.t03119:unspliced-genomic PB1 domain containing protein, expressed| Length = 2670 Score = 31.3 bits (62), Expect = 7.5 Identities = 17/38 (44%), Positives = 20/38 (52%) Frame = -1 / +3 Query: 185 WLRRRSATASTLMAHRATVAFL*DSLDAAVIPSTAPAT 72 W RRRS T ST A A D+ AA + + APAT Sbjct: 2064 WTRRRSTTTSTPRTSVAAAAAWRDTWAAARLCTPAPAT 2177
>LOC_Os03g11960:12003.t00997:unspliced-genomic superoxide dismutase 2, putative, expressed| Length = 3487 Score = 31.3 bits (62), Expect = 7.5 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = +3 / -3 Query: 393 KRFTARERRQQPKSFGGVAQAEDGAGEAACDREGRDD 503 +R TAR R++ ++ GGV + +GAG+ A D+ Sbjct: 194 RRRTARSYREETRTGGGVLEEVEGAGDRAVAAGAADE 84
>LOC_Os01g49230:12001.t04362:unspliced-genomic limonoid UDP-glucosyltransferase, putative, expressed| Length = 1570 Score = 31.3 bits (62), Expect = 7.5 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = +3 / +1 Query: 99 GGIEAVLQERNRRPVRHQRARGGXXXXXXXXXXXXDRRRP 218 GG+ V + R RP R+ R RGG RR+P Sbjct: 847 GGVRGVRERRRHRP*RNGRGRGGPREHGASVPVGRARRQP 966
>LOC_Os01g19270:12001.t01717:unspliced-genomic expressed protein| Length = 2195 Score = 31.3 bits (62), Expect = 7.5 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 / +1 Query: 409 GNDGSSQRALEEWRKRKMERARQRAIGKDGMIP 507 G+ GSS+ WR+R++ R R A+ DG P Sbjct: 1378 GDGGSSEGGE*RWRQRRIWRRRGAAVRADGSTP 1476
>LOC_Os01g04250:12001.t00313:unspliced-genomic expressed protein| Length = 2991 Score = 31.3 bits (62), Expect = 7.5 Identities = 18/40 (45%), Positives = 22/40 (55%) Frame = +1 / -1 Query: 76 AGAVDGMTAASRLSYKNATVALCAINVLAVALLLRSHFSS 195 AG M A L+ + A VAL A V + ALLLR+ SS Sbjct: 579 AGVGGAMGAVGDLALRTAVVALMAAIVSSAALLLRASTSS 460
>LOC_Os08g38490:12008.t03584:unspliced-genomic F-box domain containing protein| Length = 1155 Score = 29.0 bits (57), Expect(2) = 7.7 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = -1 / +2 Query: 632 TRSCGHCRRSNGPINDVICAPQQSNRQTNKQKK 534 TRSC R++GP CA +S R+ ++++ Sbjct: 446 TRSCTSPSRTDGPRRSTRCACSRSGRRRTRRRR 544 Score = 22.1 bits (42), Expect(2) = 7.7 Identities = 11/20 (55%), Positives = 11/20 (55%) Frame = -1 / +2 Query: 185 WLRRRSATASTLMAHRATVA 126 W R S TAST R TVA Sbjct: 902 WRGRTSPTASTS*RRRRTVA 961
>LOC_Os09g25290:12009.t02208:unspliced-genomic DNA-3-methyladenine glycosylase I, putative, expressed| Length = 4238 Score = 24.0 bits (46), Expect(2) = 9.0 Identities = 12/37 (32%), Positives = 16/37 (43%) Frame = +1 / +3 Query: 193 SWPRIAGGHRFDSDQLRYIWESEELRRAMEPVDLIRR 303 SWP + Q RY + EE A P ++RR Sbjct: 297 SWPEAGCWKQRRQGQGRYYHDEEEAVPAAAPAVVVRR 407 Score = 24.0 bits (46), Expect(2) = 9.0 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = +3 / +2 Query: 405 ARERRQQPKSFGGVAQAEDGAGEAA 479 AR RRQ +S G A GAG A Sbjct: 491 ARRRRQTTRSAAGRPPAGSGAGRWA 565
>LOC_Os11g32610:12011.t02857:unspliced-genomic chalcone synthase 8, putative| Length = 1935 Score = 26.7 bits (52), Expect(2) = 9.1 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -1 / +2 Query: 215 PPAIRGQDEKWLRRRSATASTLMAHRATVA 126 P A R + W RRRS++ T + RAT + Sbjct: 35 PSARRTRRSAWWRRRSSSTGTSGSPRATTS 124 Score = 24.9 bits (48), Expect(2) = 9.1 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = -3 / +3 Query: 147 GAQGDGCVLVGQPRCRRHP 91 G +G+G VG PR RHP Sbjct: 1026 GRRGEGDRRVGPPRRGRHP 1082
>LOC_Os08g41410:12008.t03870:unspliced-genomic glucan endo-1,3-beta-glucosidase A6 precursor, putative| Length = 2810 Score = 24.9 bits (48), Expect(2) = 9.3 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +3 / +3 Query: 330 WRAWHVNSARRDGCC 374 WRA ++RR GCC Sbjct: 402 WRATSRRTSRRRGCC 446 Score = 23.1 bits (44), Expect(2) = 9.3 Identities = 7/9 (77%), Positives = 9/9 (100%) Frame = +3 / +1 Query: 486 REGRDDSRH 512 R+GRDD+RH Sbjct: 565 RQGRDDARH 591 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 233,523,294 Number of extensions: 3304501 Number of successful extensions: 16659 Number of sequences better than 10.0: 44 Length of query: 239 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 190 Effective length of database: 52,856,264 Effective search space: 10042690160 Effective search space used: 10042690160 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
