>Q7TQ48:SRCA_MOUSE Sarcalumenin precursor - Mus musculus (Mouse)|
          Length = 910
 Score = 36.2 bits (82), Expect = 0.041
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = -2

Query: 233 APGANGLRLHYHGAATLTVLDQAPHGAVASANSRYPAWRRHLSHEGEKPSSTAPPSAIAG 54
           APG   L LHY        L+Q P GA ++AN +       LS+     + +APP  + G
Sbjct: 60  APGDKNLLLHYPDGREAESLEQTPAGAPSTANGQGSETEASLSN--TSAAESAPPGDVEG 117

Query: 53  P 51
           P
Sbjct: 118 P 118

>Q9WV93:HEY1_MOUSE Hairy/enhancer-of-split related with YRPW motif protein 1 - Mus|
           musculus (Mouse)
          Length = 299

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
 Frame = -2

Query: 242 WGEAPGANGLRLHYHGAATLTVLDQAPHGAVASANSRYPAWRRH----LSHEGEKPSSTA 75
           WG A G      H+   A   +L Q  HG   +A S  P    H     S   E P+  A
Sbjct: 180 WGSAFG------HHPHIAHPLLLPQNGHGNAGTAAS--PTEPHHQGRLASAHPEAPALRA 231

Query: 74  PPSAIAGPAMAFVSSAT 24
           PPS   GP +  V+SA+
Sbjct: 232 PPSGGLGPVLPVVTSAS 248

>Q9TSZ2:HEY1_CANFA Hairy/enhancer-of-split related with YRPW motif protein 1 - Canis|
           familiaris (Dog)
          Length = 304

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
 Frame = -2

Query: 242 WGEAPGANGLRLHYHGAATLTVLDQAPHGAV---ASANSRYPAWRRHLSHEGEKPSSTAP 72
           WG A G      H+   A   +L Q+ HG     AS    +   R   +H  E P+  AP
Sbjct: 180 WGSAFG------HHPHVAHPLLLPQSGHGNTGTSASPTDPHHQGRLAAAHP-EAPALRAP 232

Query: 71  PSAIAGPAMAFVSSAT 24
           PS   GP +  V+SA+
Sbjct: 233 PSGGLGPVLPVVTSAS 248

>Q2RJM2:TRUB_MOOTA tRNA pseudouridine synthase B - Moorella thermoacetica (strain ATCC|
           39073)
          Length = 305

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
 Frame = +2

Query: 101 HATDGVAMPGTGCLLMPPLRE------EPGRG-LSA*PRRGNASGGRWLLVPHPITR 250
           H ++GVA+ G  C  +P LRE      E G G L A  R    + G +LL PH + +
Sbjct: 249 HVSNGVAIKGDVCRPLPSLREGDIVRLETGEGQLLALARVEPDTRGSFLLKPHKVLK 305

>Q14694:UBP10_HUMAN Ubiquitin carboxyl-terminal hydrolase 10 - Homo sapiens (Human)|
          Length = 798

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
 Frame = -2

Query: 338 RDWLAWSMAASPSLYTGESPTLAVQLASIL**WGEAPGANGLRLHYHGAATL--TVLDQA 165
           RD L+ +  A P + T  +  L V    IL   GE    NG+ LH   +  L  T  + A
Sbjct: 261 RDTLSRTAGAQPCVGTDTTENLGVANGQILESSGEGTATNGVELHTTESIDLDPTKPESA 320

Query: 164 --PHGAVASANSRYP-----AWRRHLSHEGEKPSSTAP 72
             P     SA+   P     +W   L H+  KPSS++P
Sbjct: 321 SPPADGTGSASGTLPVSQPKSW-ASLFHD-SKPSSSSP 356

>Q54970:POXB_STRPN Pyruvate oxidase - Streptococcus pneumoniae|
          Length = 591

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 83  WRASPLHATDGVAMPG 130
           WR SPL AT G+A+PG
Sbjct: 407 WRTSPLFATMGIALPG 422

>Q5VST9:OBSCN_HUMAN Obscurin - Homo sapiens (Human)|
          Length = 7968

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -2

Query: 209  LHYHGAATLTVLDQAPHGAVASANSRYPAWRRHLSHEG 96
            L YH A      +   HGA+A  + R+PA RRHL   G
Sbjct: 6873 LFYHQAG-----ESPEHGALAPGSRRHPARRRHLLKGG 6905

>Q08427:EGR2_XENLA Early growth response protein 2 - Xenopus laevis (African clawed|
           frog)
          Length = 421

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = -2

Query: 140 NSRYPAWRRHLSHEGEKPSS--TAPPSAIAGPAMA 42
           NS   AWR+H++    KP S     P A+ GPA A
Sbjct: 376 NSATAAWRQHVARTSLKPQSGRDRQPCALLGPAAA 410

>P37730:AMYD_THETU Probable starch degradation products transport system permease|
           protein amyD - Thermoanaerobacter thermosulfurogenes
           (Clostridium thermosulfurogenes)
          Length = 292

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -3

Query: 379 FFFFHCFVHTIDSTGIGWLGAWL 311
           F F   F    D+T IGWLG WL
Sbjct: 127 FIFVDVFQTISDATHIGWLGGWL 149

>Q9Y5J3:HEY1_HUMAN Hairy/enhancer-of-split related with YRPW motif protein 1 - Homo|
           sapiens (Human)
          Length = 304

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = -2

Query: 200 HGAATLTVLDQAPH--GAVASANSRYPAWRRHLSHEGEKPSSTAPPSAIAGPAMAFVSSA 27
           HG A  T     PH  G + SA+   PA R             APPS   GP +  V+SA
Sbjct: 201 HGNAGTTASPTEPHHQGRLGSAHPEAPALR-------------APPSGSLGPVLPVVTSA 247

Query: 26  T 24
           +
Sbjct: 248 S 248

>Q8BKW4:ZCHC4_MOUSE Zinc finger CCHC domain-containing protein 4 - Mus musculus (Mouse)|
          Length = 512

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 369 FIASCTQLILPGLVGLEHGCFALTVHGRITNLGRPAG-LHPL 247
           F  SC QL+LP     EHG   L+    +  LGRP+  L+PL
Sbjct: 123 FCQSCQQLLLPA-DWREHGTHQLSADISVAQLGRPSQLLYPL 163

>Q8K4G1:LTBP4_MOUSE Latent-transforming growth factor beta-binding protein 4 precursor|
           - Mus musculus (Mouse)
          Length = 1666

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -1

Query: 135 PVPGMATPSVA*RGEALQHGSSLCHSRTRH 46
           P+PG+ T  V  RGE L  G   CH    H
Sbjct: 300 PLPGLRTQEVCCRGEGLAWGVHDCHPCAEH 329

>Q9BV97:ZN747_HUMAN KRAB domain-containing protein ZNF747 - Homo sapiens (Human)|
          Length = 191

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 30/96 (31%), Positives = 37/96 (38%), Gaps = 15/96 (15%)
 Frame = +2

Query: 89  ASPLHATDGVAMPGTG---------CLLMPPLREEPGRGLSA*PRRGNASGGRWLLVPHP 241
           A+PL A  GV  PG G         C+L+P   E   R  S   RR    G R      P
Sbjct: 93  AAPLGAACGVGGPGAGQAASSQRGVCVLLPQESEAASRRSSPGWRRRPNCGIRL-----P 147

Query: 242 ITRGWRPAGRPRLVILPCTVRAK------QPCSKPT 331
             R WR   + R   +P T + K      +P   PT
Sbjct: 148 RIRRWRSVRQKRTQQIPETRKRKDKGKGREPWRSPT 183

>Q70M86:STRN_SORMA Striatin Pro11 - Sordaria macrospora|
          Length = 845

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 216 AVGSWCLTPSLEDGGQLDGQGW*FS 290
           ++ SW  +P+   GG+  G GW FS
Sbjct: 493 SLASWSPSPNFSTGGRAQGDGWIFS 517

>Q9V853:SMUF1_DROME E3 ubiquitin-protein ligase Smurf1 - Drosophila melanogaster (Fruit|
           fly)
          Length = 1061

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
 Frame = -2

Query: 242 WGEAPGANGLRLHYHGAATLTVLDQAPH--GAVASANSRYPAWRRHLSHEGEKPSSTAPP 69
           W E    NG R++Y   AT +     P   G V S+++  P  +RH +H G      AP 
Sbjct: 173 WEERRTDNG-RVYYVNHATKSTQWDRPRQPGVVGSSHATSPQ-QRHNTHNGNSGDRQAP- 229

Query: 68  SAIAGPAMAFVSSATVDLGNKS 3
              AGP  +   +  ++ G++S
Sbjct: 230 ---AGPTRSTTCTNLMNNGHRS 248

>O44248:RL5_ANOGA 60S ribosomal protein L5 - Anopheles gambiae (African malaria|
           mosquito)
          Length = 325

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 22/66 (33%), Positives = 25/66 (37%)
 Frame = +2

Query: 146 MPPLREEPGRGLSA*PRRGNASGGRWLLVPHPITRGWRPAGRPRLVILPCTVRAKQPCSK 325
           +PP R  P R       R   SGGRW     P      PA R      P +    +P SK
Sbjct: 249 IPPSRRNPRR-------RSPRSGGRWPSCRSP------PARRRSRSTRPTSWPRSRPTSK 295

Query: 326 PTNPGR 343
           P  P R
Sbjct: 296 PKRPRR 301

>O52618:NODI1_RHIME Nod factor export ATP-binding protein I - Rhizobium meliloti|
           (Sinorhizobium meliloti)
          Length = 335

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = -2

Query: 335 DWLAWSMAASPSLYTGESPTLAVQLASIL**WGEAPGANGLRLHYHGAATLTVLDQAPHG 156
           +W   +  A  +   G  PT+A+ +AS+   +G+ P  NGL           +L   P+G
Sbjct: 15  EWKDQTGLAVKTAIPGAKPTVAIDVASVTKSYGDKPVINGLSFTVAAGECFGLL--GPNG 72

Query: 155 AVASANSR 132
           A  S  +R
Sbjct: 73  AGKSTITR 80

>P25315:NIFY_AZOBR Protein nifY - Azospirillum brasilense|
          Length = 227

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2

Query: 233 PHPITRGWRPAGRPRLVILPCTVRAKQPCSKPT 331
           P P  R W P  RPR   LP    ++ P S+PT
Sbjct: 30  PVPFRRLWPPCPRPRRG-LPAATTSRSPSSRPT 61

>Q05925:HME1_HUMAN Homeobox protein engrailed-1 - Homo sapiens (Human)|
          Length = 392

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = -2

Query: 233 APGANGLRLHYHGAATLTVLDQAPHGAVASANSR----YPAWRRHLSHEGEKPSS 81
           +PGA G +   HG   + ++  A  G V   +S+    +PAW  + +   ++PSS
Sbjct: 234 SPGAQGTKYPEHGNPAILLMGSANGGPVVKTDSQQPLVWPAW-VYCTRYSDRPSS 287

>Q2KIN4:HEY1_BOVIN Hairy/enhancer-of-split related with YRPW motif protein 1 - Bos|
           taurus (Bovine)
          Length = 304

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
 Frame = -2

Query: 242 WGEAPGANGLRLHYHGAATLTVLDQAPHGAV---ASANSRYPAWRRHLSHEGEKPSSTAP 72
           WG A G      H+   A   +L Q+ HG     AS    +   R   +H  E  +  AP
Sbjct: 180 WGSAFG------HHPHVAHPLLLSQSTHGNTGTSASPTESHHQGRLATAHP-EASALRAP 232

Query: 71  PSAIAGPAMAFVSSAT 24
           PS   GP +  V+SA+
Sbjct: 233 PSGGLGPVLPVVTSAS 248


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 81,158,663
Number of extensions: 1880446
Number of successful extensions: 5057
Number of sequences better than 10.0: 20
Number of HSP's gapped: 5047
Number of HSP's successfully gapped: 20
Length of query: 143
Length of database: 100,686,439
Length adjustment: 102
Effective length of query: 41
Effective length of database: 72,708,349
Effective search space: 2981042309
Effective search space used: 2981042309
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)